CSPI04G05030 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G05030
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Description40S ribosomal protein SA
LocationChr4 : 3381534 .. 3384017 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAGCCCTCTTCTTCCGTTCGCCGAATCCAACTCCTACTACTATATTTCTGCGCCGGCGGCGGCGGCGGCAGGGTGCGCTCTCTTGAACACATATTCCGTCAGTTTTTCACTATTGACCCATGTTTTTTTTTCTCTCTATATATTTATTTTTTTAGAATTTTGTTCGTCTCTATTGAGATAGCTCGATGTAAGTATAGATATTGTATCAACCCTGATGTAAACCATGATTCACAGAGGTTTGGCAATGGCGACTGGTACAGAACAGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGTATTTTGTGAATACATTTCAGATTTATAGATCTTTGCTTTTTTTAAAATCTGTTAAGTGCTTCATAGACACTGATTATTAGGAGGCCTTTCCACTTATTTTCTCTTTGTTTTCAATGTTTTATAGATATTTAGCTTGAACTGGAATCTTAAGTCATTTAATGGGCGTGCTTTATCTATATTTCAAATCAGAGTTTGATCATAATTTCATTAATTCCCATGAATGGATATTTGTTCTCATGATGTAGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTGAAGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGGTGCTTTAACATCTTTAAGAATCAATTCTAGTTTGGGATTATAAGTTTGCGTTGAAGAGGATGGTTTTCTCTTACCAAATTTAGATTTACTCGTGTTTATTCCCTTAAGCATAAGCCATAGTTTATGCTTTACTTTAGTTGTTGGTGCTGCTATTTATGTTGCCTGGTTGGTTTATTTGCTTGTTGCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTAACTTCTTTACCTATCTGAACTTGAGAAATTGCATTATGACATGATATTTGAAATTGACACTTGATTGTTGGATGTTAAATCAAAGGCTTGGAAAGAATGGTAATGGTATGCACGTGTTTGTTGCACAGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCATTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGCGGCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGGTTGAATCCGAGCCTTTTCTTTCTTGCTTATTTTAATAATTTAATCCTTTGCCATTGCCATTGCCATTGCTGTGTTTTACACTCCCAACTATTTTTTTAGGCTGTCATTTTTTCCTATAAATAATAGTGAAAGTTCCCAAGTCCCAAGGCTTTAGGCCTTAGGCTTTTAGAGCTTAACAAAAGGCGAGTGCTGATAAATGCGCCTCTCCTTTGAGGCGAGGTGCTAGCGTTGAGCCTTTTAAACACTGGTTTTAGGACGAGTGCATAAAAGGGTTTTATCGTGGATATTTATTTATTGTTCTTTTTACTTTTGCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTCCTGCCTCCGATTGGTAACAAGGGAAGCTTTCCCTCTTACCCGCAATTTTGATTCATAGTTATGAGTTTCGCTTGTTCATGTAGCAGTGCCAGCATAAGTAGGCTTAAACACTCAGTCTGTAAACCAAAGATGTAGTACCACCCTTTTTTTTTTCTTTCTCAAGACTGATTTACGTTTTCTTTCTTCTAGTCCAGTTTTAGGTTTTAAGATTGGACGTTATTTTTACCTTCAACGTGGGTATTTTAGTTTGGTACAATTTTTTATGAGAAACAAAAAATAGCTCCAACCGTACCAAGACGAAATACTTTGTTCTACTGATGGAATTATGTACCATTATTGTGTTTGTAGCGGAGAATCTGTTGCCCTTATTTCACCTCAATCTGTTGCCGCCACCATTTTTTCTATTGGCTGGAATTGTATTCCTCGGAGAATGTTATATGAGATAATTGTCTTGTTGACTCAAAATTGAAGTCCA

mRNA sequence

ATGGCGACTGGTACAGAACAGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTGAAGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCATTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGCGGCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTCCTGCCTCCGATTGGTAA

Coding sequence (CDS)

ATGGCGACTGGTACAGAACAGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTGAAGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCATTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGCGGCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTCCTGCCTCCGATTGGTAA
Homology
[Close]
BLAST of CSPI04G05030 vs. Swiss-Prot
Match: RSSA_SOYBN (40S ribosomal protein SA OS=Glycine max PE=2 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.3e-125
Identity = 227/286 (79.37%), Postives = 240/286 (83.92%), Query Frame = 1 

Query: 2   ATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQ 61
           A     RQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 62  MAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEP 121
           +AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+EP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 122 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 181
           RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 182 RMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVD-Q 241
           RMVLQMRGT+RPG KWDVMVDLFFYREPEE K++EEEEA A  DY I DF +  +A D Q
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPA-VDYAITDFNAGAIAADGQ 246

Query: 242 W--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPP 285
           W    D  W      P  A   V+    A+    A   WG A+PPP
Sbjct: 247 WPGTIDQSWSDAVPQPIPAVPGVNWGAPAEAPAAAGGDWGEAVPPP 291

[Close]
BLAST of CSPI04G05030 vs. Swiss-Prot
Match: RSSA_VITVI (40S ribosomal protein SA OS=Vitis vinifera GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 5.4e-124
Identity = 236/316 (74.68%), Postives = 251/316 (79.43%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATPT--RALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  QLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP---LA 240
           ARMVLQMR T+ PG+KWDVMVDLFFYREPEE KE+E +E VA PDYGI D+ +     L 
Sbjct: 181 ARMVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLG 240

Query: 241 VDQW---VPDA-QWGA--PNVAPTAAAASVSNAEWAQESVR------AADGWGVAIPPPA 299
              W   + DA QWGA  P VAP  A   V  + W   +        A DGW  A  PP 
Sbjct: 241 GGDWGAPITDAPQWGADVPAVAPIPA---VPGSNWGDAAPMPSAVPIATDGWDAAAAPPV 300

[Close]
BLAST of CSPI04G05030 vs. Swiss-Prot
Match: RSSA_DAUCA (40S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 5.9e-123
Identity = 226/298 (75.84%), Postives = 246/298 (82.55%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MA+G   R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MASGA--RELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
            +AARVIV+IENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPL-AVD 240
           ARMVLQMRG +  G+KW+VMVDLFFYREPEE K++EEE+ +   DY +AD+ +AP+   D
Sbjct: 181 ARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGAD 240

Query: 241 QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPA 296
           QW  +PDAQWG   V P  A ++V    W      A DGW  A  PP P       PA
Sbjct: 241 QWNAIPDAQWGGDVVQP--ANSAVPAGTWTDAGPIAGDGWDAAAAPPVPGAVGLDVPA 292

[Close]
BLAST of CSPI04G05030 vs. Swiss-Prot
Match: RSSA_CICAR (40S ribosomal protein SA OS=Cicer arietinum GN=RAP40 PE=2 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 7.7e-123
Identity = 229/304 (75.33%), Postives = 249/304 (81.91%), Query Frame = 1 

Query: 1   MATGTE-QRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT T   RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AAR+IVAIEN +DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVD 240
           LARMVLQMRGT+RPG KWDVMVDLFFYREPEE K+ EE+E VA PDY IADF  + +  D
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSD 240

Query: 241 -QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPP--APSLEAAAPP 299
            QW    D  W      P  A  +V+   WA     A D WG A+PPP   P+    + P
Sbjct: 241 GQWPAAIDQPWNDAVPQPIPAVPAVN---WAAPEAVAGD-WGEAVPPPQQIPTAGIESVP 299

[Close]
BLAST of CSPI04G05030 vs. Swiss-Prot
Match: RSSA1_ARATH (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana GN=RPSaA PE=1 SV=3)

HSP 1 Score: 424.1 bits (1089), Expect = 1.3e-117
Identity = 216/298 (72.48%), Postives = 240/298 (80.54%), Query Frame = 1 

Query: 9   QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV
Sbjct: 11  QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70

Query: 69  AIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
           AIENP+DIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 71  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 130

Query: 129 PRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190

Query: 189 GTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW---- 248
           GT+  G KWDVMVDLFFYREPEE K ++E+EA    +YG     ++G   +  DQW    
Sbjct: 191 GTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGM--VGGDQWTTAQ 250

Query: 249 VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAAD-GWGVAIPPPAPSLEAAAPPASDW 299
           +PDA W     AP +AA +   A W+  +   AD GW  A PP       +  PA+ W
Sbjct: 251 IPDAAWPGEGQAPISAAPAA--ASWSDSAAAPADGGWEAAAPP-------SGAPAAGW 297

[Close]
BLAST of CSPI04G05030 vs. TrEMBL
Match: A0A0A0KUD9_CUCSA (40S ribosomal protein SA OS=Cucumis sativus GN=Csa_4G038770 PE=3 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 2.2e-169
Identity = 295/298 (98.99%), Postives = 297/298 (99.66%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240

Query: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 299
           WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
Sbjct: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 298

[Close]
BLAST of CSPI04G05030 vs. TrEMBL
Match: A0A0A0L946_CUCSA (40S ribosomal protein SA OS=Cucumis sativus GN=Csa_3G646520 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.4e-142
Identity = 260/307 (84.69%), Postives = 271/307 (88.27%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPL-AVD 240
           ARMVLQMRGT+R G++WDVMVDLFFYREPEE KEKEEEEAVAPPDYGIAD+G APL A D
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QW---VPDAQWGAPNVAPTAAAA-----SVSNAEWAQESV--RAADGWGVAIPPPAPSLE 297
           QW   + DAQWGAP++ P   AA      VSN EW QE V   A+DGW  A PPPAPS E
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

[Close]
BLAST of CSPI04G05030 vs. TrEMBL
Match: A0A0A0K8X1_CUCSA (40S ribosomal protein SA OS=Cucumis sativus GN=Csa_6G016990 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 3.8e-137
Identity = 251/307 (81.76%), Postives = 265/307 (86.32%), Query Frame = 1 

Query: 1   MATGTEQ-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATG    RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQ+AARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVD 240
           LARMVLQMRGT+R G+KWDVMVDLFFYREPEE KE EEEEA+ P D+GIAD+ +APL  D
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240

Query: 241 QW---VPDAQWGAPNVAPT-AAAASVSNAEWAQESVR-AADGWGVAI---PPPAPSLEAA 299
           QW   +PDAQWGA +  P+ A     S AEWA E V  AADGW  A    PPPA S E  
Sbjct: 241 QWTSQIPDAQWGAADAIPSPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300

[Close]
BLAST of CSPI04G05030 vs. TrEMBL
Match: A0A059ARV8_EUCGR (40S ribosomal protein SA OS=Eucalyptus grandis GN=EUGRSUZ_I02137 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.5e-128
Identity = 237/304 (77.96%), Postives = 256/304 (84.21%), Query Frame = 1 

Query: 1   MATGTEQ-----RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGK 60
           MATG+       RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGK
Sbjct: 1   MATGSTTAAAPARQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGK 60

Query: 61  TWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ 120
           TWEKLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYT  HAIAGRHTPGTFTNQLQ
Sbjct: 61  TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTNTHAIAGRHTPGTFTNQLQ 120

Query: 121 TSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC 180
           TSF+EPRLLILTDPRTDHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC
Sbjct: 121 TSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC 180

Query: 181 LFWLLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP 240
           LFWLLARMVLQMRGT+ PG+KWDVMVDLFFYREPEE K++EEEEA+   DYGI D+ +  
Sbjct: 181 LFWLLARMVLQMRGTITPGHKWDVMVDLFFYREPEEAKQQEEEEAIVAGDYGITDYAAGQ 240

Query: 241 LAVDQW---VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGV-AIPPPAPSLEAA 296
              DQW   +PD+QW +   AP   A  +    W + +  AADGW + A P PAP   AA
Sbjct: 241 AIPDQWTSQIPDSQWASEAAAPPVPA--IQPTGWTETAPVAADGWEIAAAPAPAP---AA 299

[Close]
BLAST of CSPI04G05030 vs. TrEMBL
Match: M5W4J8_PRUPE (40S ribosomal protein SA OS=Prunus persica GN=PRUPE_ppa009383mg PE=3 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 1.9e-128
Identity = 239/301 (79.40%), Postives = 254/301 (84.39%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MA  +  R LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MANASPPRLLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWDKL 60

Query: 61  QMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW+L
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWIL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRG++RPG+KWDVMVDLFFYREPEE KEKEEEEA    DYGI D+ +A    DQ
Sbjct: 181 ARMVLQMRGSLRPGHKWDVMVDLFFYREPEEAKEKEEEEAATAADYGITDYSAAG---DQ 240

Query: 241 W---VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASD 299
           W   V DA W  P  AP AA  +     W  E V AADGWG  +P PAP     AP A+ 
Sbjct: 241 WPAQVSDAPW--PTDAP-AAIPAAPVVSWTAEPVAAADGWGEPVPGPAP--VEGAPTATG 293

[Close]
BLAST of CSPI04G05030 vs. TAIR10
Match: AT1G72370.1 (AT1G72370.1 40s ribosomal protein SA)

HSP 1 Score: 424.1 bits (1089), Expect = 7.2e-119
Identity = 216/298 (72.48%), Postives = 240/298 (80.54%), Query Frame = 1 

Query: 9   QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV
Sbjct: 11  QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70

Query: 69  AIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
           AIENP+DIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 71  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 130

Query: 129 PRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 131 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 190

Query: 189 GTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW---- 248
           GT+  G KWDVMVDLFFYREPEE K ++E+EA    +YG     ++G   +  DQW    
Sbjct: 191 GTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGM--VGGDQWTTAQ 250

Query: 249 VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAAD-GWGVAIPPPAPSLEAAAPPASDW 299
           +PDA W     AP +AA +   A W+  +   AD GW  A PP       +  PA+ W
Sbjct: 251 IPDAAWPGEGQAPISAAPAA--ASWSDSAAAPADGGWEAAAPP-------SGAPAAGW 297

[Close]
BLAST of CSPI04G05030 vs. TAIR10
Match: AT3G04770.1 (AT3G04770.1 40s ribosomal protein SA B)

HSP 1 Score: 366.7 bits (940), Expect = 1.4e-101
Identity = 174/198 (87.88%), Postives = 189/198 (95.45%), Query Frame = 1 

Query: 5   TEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAA 64
           T  RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAA
Sbjct: 8   TAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAA 67

Query: 65  RVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLL 124
           RVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+EPRLL
Sbjct: 68  RVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLL 127

Query: 125 ILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMV 184
           ILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMV
Sbjct: 128 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMV 187

Query: 185 LQMRGTVRPGYKWDVMVD 203
           LQMRGT+    KWDVMV+
Sbjct: 188 LQMRGTILAAQKWDVMVN 205

[Close]
BLAST of CSPI04G05030 vs. NCBI nr
Match: gi|778690612|ref|XP_011653139.1| (PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus])

HSP 1 Score: 602.8 bits (1553), Expect = 3.2e-169
Identity = 295/298 (98.99%), Postives = 297/298 (99.66%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240

Query: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 299
           WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
Sbjct: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 298

[Close]
BLAST of CSPI04G05030 vs. NCBI nr
Match: gi|659107547|ref|XP_008453731.1| (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo])

HSP 1 Score: 589.7 bits (1519), Expect = 2.8e-165
Identity = 289/298 (96.98%), Postives = 290/298 (97.32%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 299
           WVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298

[Close]
BLAST of CSPI04G05030 vs. NCBI nr
Match: gi|659120752|ref|XP_008460336.1| (PREDICTED: 40S ribosomal protein SA-like isoform X2 [Cucumis melo])

HSP 1 Score: 515.0 bits (1325), Expect = 8.8e-143
Identity = 259/305 (84.92%), Postives = 272/305 (89.18%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 73  MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 132

Query: 61  QMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 133 QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 192

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 193 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 252

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPL-AVD 240
           ARMVLQMRGT+R G++WDVMVDLFFYREPEE KEKEEEEAVAPPDYGIAD+G APL A D
Sbjct: 253 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 312

Query: 241 QW---VPDAQWGAPNVAPTAAAA----SVSNAEWAQESVR-AADGWGVAIPPPAPSLEAA 297
           QW   + DAQWGAP++ P   AA     VSN EW QE V  A+DGW  A+PPPAP+ E  
Sbjct: 313 QWAGQISDAQWGAPDLIPAPDAAVVVPPVSNVEWTQEPVALASDGWDAAVPPPAPAAEGG 372

[Close]
BLAST of CSPI04G05030 vs. NCBI nr
Match: gi|449453391|ref|XP_004144441.1| (PREDICTED: 40S ribosomal protein SA [Cucumis sativus])

HSP 1 Score: 513.8 bits (1322), Expect = 2.0e-142
Identity = 260/307 (84.69%), Postives = 271/307 (88.27%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPL-AVD 240
           ARMVLQMRGT+R G++WDVMVDLFFYREPEE KEKEEEEAVAPPDYGIAD+G APL A D
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QW---VPDAQWGAPNVAPTAAAA-----SVSNAEWAQESV--RAADGWGVAIPPPAPSLE 297
           QW   + DAQWGAP++ P   AA      VSN EW QE V   A+DGW  A PPPAPS E
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

[Close]
BLAST of CSPI04G05030 vs. NCBI nr
Match: gi|659120750|ref|XP_008460335.1| (PREDICTED: 40S ribosomal protein SA-like isoform X1 [Cucumis melo])

HSP 1 Score: 512.7 bits (1319), Expect = 4.4e-142
Identity = 258/306 (84.31%), Postives = 271/306 (88.56%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 73  MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 132

Query: 61  QMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 133 QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 192

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 193 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 252

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPL-AVD 240
           ARMVLQMRGT+R G++WDVMVDLFFYREPEE KEKEEEEAVAPPDYGIAD+G APL A D
Sbjct: 253 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 312

Query: 241 QW---VPDAQWGAPNVAPTAAAA----SVSNAEWAQES--VRAADGWGVAIPPPAPSLEA 297
           QW   + DAQWGAP++ P   AA     VSN EW QE     A+DGW  A+PPPAP+ E 
Sbjct: 313 QWAGQISDAQWGAPDLIPAPDAAVVVPPVSNVEWTQEPAVALASDGWDAAVPPPAPAAEG 372

The following BLAST results are available for this feature:
BLAST of CSPI04G05030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RSSA_SOYBN1.3e-12579.3740S ribosomal protein SA OS=Glycine max PE=2 SV=1[more]
RSSA_VITVI5.4e-12474.6840S ribosomal protein SA OS=Vitis vinifera GN=GSVIVT00034021001 PE=3 SV=1[more]
RSSA_DAUCA5.9e-12375.8440S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1[more]
RSSA_CICAR7.7e-12375.3340S ribosomal protein SA OS=Cicer arietinum GN=RAP40 PE=2 SV=1[more]
RSSA1_ARATH1.3e-11772.4840S ribosomal protein Sa-1 OS=Arabidopsis thaliana GN=RPSaA PE=1 SV=3[more]
BLAST of CSPI04G05030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUD9_CUCSA2.2e-16998.9940S ribosomal protein SA OS=Cucumis sativus GN=Csa_4G038770 PE=3 SV=1[more]
A0A0A0L946_CUCSA1.4e-14284.6940S ribosomal protein SA OS=Cucumis sativus GN=Csa_3G646520 PE=3 SV=1[more]
A0A0A0K8X1_CUCSA3.8e-13781.7640S ribosomal protein SA OS=Cucumis sativus GN=Csa_6G016990 PE=3 SV=1[more]
A0A059ARV8_EUCGR1.5e-12877.9640S ribosomal protein SA OS=Eucalyptus grandis GN=EUGRSUZ_I02137 PE=3 SV=1[more]
M5W4J8_PRUPE1.9e-12879.4040S ribosomal protein SA OS=Prunus persica GN=PRUPE_ppa009383mg PE=3 SV=1[more]
BLAST of CSPI04G05030 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G72370.17.2e-11972.48 40s ribosomal protein SA[more]
AT3G04770.11.4e-10187.88 40s ribosomal protein SA B[more]
BLAST of CSPI04G05030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690612|ref|XP_011653139.1|3.2e-16998.99PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus][more]
gi|659107547|ref|XP_008453731.1|2.8e-16596.98PREDICTED: 40S ribosomal protein SA-like [Cucumis melo][more]
gi|659120752|ref|XP_008460336.1|8.8e-14384.92PREDICTED: 40S ribosomal protein SA-like isoform X2 [Cucumis melo][more]
gi|449453391|ref|XP_004144441.1|2.0e-14284.69PREDICTED: 40S ribosomal protein SA [Cucumis sativus][more]
gi|659120750|ref|XP_008460335.1|4.4e-14284.31PREDICTED: 40S ribosomal protein SA-like isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001865Ribosomal_S2
IPR005707Ribosomal_S2_euk/arc
IPR018130Ribosomal_S2_CS
IPR023591Ribosomal_S2_flav_dom_sf
IPR027498Ribosomal_S2_euk
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G05030.1CSPI04G05030.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 47..56
score: 3.6E-32coord: 96..113
score: 3.6E-32coord: 121..138
score: 3.6E-32coord: 159..173
score: 3.6E-32coord: 17..35
score: 3.6E-32coord: 138..149
score: 3.6
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 119..184
score: 8.6E-13coord: 20..114
score: 1.9
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 5..292
score: 9.7E
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMsTIGR01012TIGR01012coord: 12..208
score: 3.5
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 17..28
scor
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 121..145
scor
IPR023591Ribosomal protein S2, flavodoxin-like domainunknownSSF52313Ribosomal protein S2coord: 12..202
score: 2.49
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 2..269
score: 50
NoneNo IPR availableGENE3DG3DSA:3.40.50.10490coord: 32..217
score: 4.8
NoneNo IPR availablePANTHERPTHR11489:SF940S RIBOSOMAL PROTEIN SAcoord: 5..292
score: 9.7E