Cla014530 (gene) Watermelon (97103) v1

Overview
NameCla014530
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
Description40S ribosomal protein SA (AHRD V1 **** B4G194_MAIZE); contains Interpro domain(s) IPR005707 Ribosomal protein S2, eukaryotic/archaeal
LocationChr7 : 21998836 .. 22000952 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTGGAACAGAACAGCGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGTATTTTTTTAATACATTTCACTTTTGGATCTTTGCTGTTGTTTAAATCCGTAGAGAGGGCTTCCTAGATATTGATTAGTAGGCCTTTCCCGTCATTTCTCTCTGTTTTCAATATTTAGCTTGAACTGAAACTTTTAAGTCCTATAATGGGTCTGCATTATTTATATTTCTAGCCTTAATTTTCAGAATGAATCTCTTAGAACCAGAATGTGATCATAATTTCATTAATCCTCATGAATGGGTTTTATTCTCTTTGTGTAGGAATCTACATTATTAACCTAGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTCAAGACATTATTGTTCAGTCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGCGCTCATGCAATTGCTGGGAGGCACACCCCTGGAACGTTCACCAATCAGCTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTCACTGATCCTAGAACTGATCATCAGGTGCTTTAACATTCTTAAGAATCAATTCTAGTTTGGAATTATAAGTTTAAGTCCAAGAGGATGGTTTTCTCTTACCAATTTTAGATCTACTCATGTGTATTCCCTCAGCCATAACTTGTGCCTAACTTCACTTGTTGTTGGGGCTGCTATTTATGTTGCCTGGTTGGTTTCTTGCTTGTTGCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCGTTTTGTGACACTGATTCCCCAATGCGGTATGTTGACATCGGGATTCCAGCAAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTCGCAAGGATGGTTTTGCAGATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGATGTGATGGTAACTTCTTCTGAGTTCATTATCTATCTGAACTTGAGAAATTGCATTCTGATATGATAATTGAAATTGTCACTTGATTGTTGAAACTTAAATCAAAGTGTAATGAATGGTATGCACGCGTGTTTATTGTATAGGTGGATTTGTTTTTCTACCGGGAGCCCGAGGAGGTGAAGGAGAAAGAAGAAGAAGAGGCTGTTGCACCACCAGATTATGGCATTGCAGATTTTGGTTCTGCTCCGGTGGTTGTAGATCCATGGGTTCCCGATGCTCAATGGGATGCCCCTGATGTGGTTCCAGCTGCTGCTGCTGCTCCAGTTTCTAATGTTGAGTGGGGCCAAGAGCAAGGTAGAATCCGAGCCCTTTCTTTCTGGCTTTAGTTTATTGCATATGTGCCATTGGTGTGTTTTCCACTTAGGAAGTCAATTCAAATAGCCCCAAGTTTTTCAGCCTTACCTCTTTACTTCCAATCATCTTGTAGATTGTTTGTCATTTCCTTTTGACTAGGAATTTTAAGATGCAACCAGTTAGGTTGGTTTTCTTTTCTAGGCATTGTTTTTCAAAGTTCTAGGTGCAACGAAGTGCTATAACCTTATGGGGCTTAGTTAAGCAAAAGGTGCAAAAAGTAGCGTGAGTTTATTGTTAGTAGTCGAAGGAGAATATGCAAAAAGAAAAAATCGTATTCAGGGTTAATAATGTTTATTTTTTCTTTTTTTTGGAAGAAAAAACCCTAAACTCAAGGATTTTGCGTTTATTGTTAGTAGTATTCTTTTAAATGAAATCCCCAAGTCCCAAGACCTTGGACTTTAGGCTTAGGGCTTCATAAAAGGCATGTGCTAATAAATGCTTCCATGAGGCAAGGTACCTGCTCCTAGGTGCTTGCGTTGAGCCTTTTGAACACTGGCGCTTTTAGGACAACATAATACTGGTTAAGATCTTCTTAATGCTTACTGTGGATATTTATTTCTTTGTTATTTGGCCTTTTACAGTGGGAGCAGCAGATGGATGGGATGCTGCTGTAGCACCACCAGCACCTTCACTTGAAGCTGGTGCACCTCCTGCCGCCGGTCGGTAA

mRNA sequence

ATGGCGACTGGAACAGAACAGCGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACCTAGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTCAAGACATTATTGTTCAGTCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGCGCTCATGCAATTGCTGGGAGGCACACCCCTGGAACGTTCACCAATCAGCTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTCACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCGTTTTGTGACACTGATTCCCCAATGCGGTATGTTGACATCGGGATTCCAGCAAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTCGCAAGGATGGTTTTGCAGATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGATGTGATGGTGGATTTGTTTTTCTACCGGGAGCCCGAGGAGGTGAAGGAGAAAGAAGAAGAAGAGGCTGTTGCACCACCAGATTATGGCATTGCAGATTTTGGTTCTGCTCCGGTGGTTGTAGATCCATGGGTTCCCGATGCTCAATGGGATGCCCCTGATGTGGTTCCAGCTGCTGCTGCTGCTCCAGTTTCTAATGTTGAGTGGGGCCAAGAGCAAGTGGGAGCAGCAGATGGATGGGATGCTGCTGTAGCACCACCAGCACCTTCACTTGAAGCTGGTGCACCTCCTGCCGCCGGTCGGTAA

Coding sequence (CDS)

ATGGCGACTGGAACAGAACAGCGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACCTAGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTCAAGACATTATTGTTCAGTCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGCGCTCATGCAATTGCTGGGAGGCACACCCCTGGAACGTTCACCAATCAGCTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTCACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCGTTTTGTGACACTGATTCCCCAATGCGGTATGTTGACATCGGGATTCCAGCAAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTCGCAAGGATGGTTTTGCAGATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGATGTGATGGTGGATTTGTTTTTCTACCGGGAGCCCGAGGAGGTGAAGGAGAAAGAAGAAGAAGAGGCTGTTGCACCACCAGATTATGGCATTGCAGATTTTGGTTCTGCTCCGGTGGTTGTAGATCCATGGGTTCCCGATGCTCAATGGGATGCCCCTGATGTGGTTCCAGCTGCTGCTGCTGCTCCAGTTTCTAATGTTGAGTGGGGCCAAGAGCAAGTGGGAGCAGCAGATGGATGGGATGCTGCTGTAGCACCACCAGCACCTTCACTTGAAGCTGGTGCACCTCCTGCCGCCGGTCGGTAA

Protein sequence

MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVVDPWVPDAQWDAPDVVPAAAAAPVSNVEWGQEQVGAADGWDAAVAPPAPSLEAGAPPAAGR
Homology
[Close]
BLAST of Cla014530 vs. Swiss-Prot
Match: RSSA_VITVI (40S ribosomal protein SA OS=Vitis vinifera GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 5.2e-127
Identity = 241/319 (75.55%), Postives = 250/319 (78.37%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATPT--RALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  QLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGS------- 240
           ARMVLQMR T+ PGHKWDVMVDLFFYREPEE KE+E +E VA PDYGI D+ +       
Sbjct: 181 ARMVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLG 240

Query: 241 -----APVVVDPWVPDAQWDAPDVVPAAAAAP-VSNVEWGQEQVG------AADGWDAAV 298
                AP+   P     QW A   VPA A  P V    WG           A DGWDAA 
Sbjct: 241 GGDWGAPITDAP-----QWGAD--VPAVAPIPAVPGSNWGDAAPMPSAVPIATDGWDAAA 300

[Close]
BLAST of Cla014530 vs. Swiss-Prot
Match: RSSA_DAUCA (40S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 9.7e-126
Identity = 231/299 (77.26%), Postives = 247/299 (82.61%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MA+G   R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MASGA--RELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
            +AARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPV-VVD 240
           ARMVLQMRG +  GHKW+VMVDLFFYREPEE K++EEE+ +   DY +AD+ +AP+   D
Sbjct: 181 ARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGAD 240

Query: 241 PW--VPDAQWDAPDVVPAAAAAPVSNVEWGQEQVGAADGWDAAVAPPAP---SLEAGAP 294
            W  +PDAQW    V PA +A P     W      A DGWDAA APP P    L+  AP
Sbjct: 241 QWNAIPDAQWGGDVVQPANSAVPAGT--WTDAGPIAGDGWDAAAAPPVPGAVGLDVPAP 293

[Close]
BLAST of Cla014530 vs. Swiss-Prot
Match: RSSA_SOYBN (40S ribosomal protein SA OS=Glycine max PE=2 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.7e-125
Identity = 232/289 (80.28%), Postives = 239/289 (82.70%), Query Frame = 1 

Query: 2   ATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQ 61
           A     RQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 62  MAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEP 121
           +AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+EP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 122 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 181
           RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 182 RMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVVD-- 241
           RMVLQMRGT+RPG KWDVMVDLFFYREPEE K++EEEEA A  DY I DF +  +  D  
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPA-VDYAITDFNAGAIAADGQ 246

Query: 242 -PWVPDAQWDAPDVVPAAAAAPVSNVEWG--QEQVGAADG-WDAAVAPP 285
            P   D  W   D VP    A V  V WG   E   AA G W  AV PP
Sbjct: 247 WPGTIDQSWS--DAVPQPIPA-VPGVNWGAPAEAPAAAGGDWGEAVPPP 291

[Close]
BLAST of Cla014530 vs. Swiss-Prot
Match: RSSA_CICAR (40S ribosomal protein SA OS=Cicer arietinum GN=RAP40 PE=2 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 1.7e-122
Identity = 231/303 (76.24%), Postives = 245/303 (80.86%), Query Frame = 1 

Query: 1   MATGTE-QRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT T   RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVVD 240
           LARMVLQMRGT+RPG KWDVMVDLFFYREPEE K+ EE+E VA PDY IADF  + +  D
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSD 240

Query: 241 ---PWVPDAQWDAPDVVPAAAAAPVSNVEWGQEQVGAADGWDAAVAPPAPSLEAG--APP 298
              P   D  W+  D VP    A V  V W   +  A D W  AV PP     AG  + P
Sbjct: 241 GQWPAAIDQPWN--DAVPQPIPA-VPAVNWAAPEAVAGD-WGEAVPPPQQIPTAGIESVP 298

[Close]
BLAST of Cla014530 vs. Swiss-Prot
Match: RSSA_BRANA (40S ribosomal protein SA OS=Brassica napus GN=LRP PE=2 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 7.5e-118
Identity = 208/277 (75.09%), Postives = 225/277 (81.23%), Query Frame = 1 

Query: 9   QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QLSQKEADI+MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKL MAARVIV
Sbjct: 8   QLSQKEADIKMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIV 67

Query: 69  AIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
           AIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 68  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 127

Query: 129 PRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 128 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 187

Query: 189 GTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGI--ADFGSAPVVVDPWVPDAQ 248
           GT+RP  KWDVMVDLFFYREPEE K ++E+E     ++G+   ++G         +PDA 
Sbjct: 188 GTIRPAQKWDVMVDLFFYREPEETKPEDEDEVAPQAEFGLPAPEYGGGDQWTTAAIPDAA 247

Query: 249 WDAPDVVPAAAAAPVSNVEWGQEQVGAADGWDAAVAP 284
           W      P +AA    +         A  GWDAAV P
Sbjct: 248 WPGEAQAPISAAPAAGSWNDSAAPAAAEGGWDAAVPP 284

[Close]
BLAST of Cla014530 vs. TrEMBL
Match: A0A0A0KUD9_CUCSA (40S ribosomal protein SA OS=Cucumis sativus GN=Csa_4G038770 PE=3 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 2.7e-159
Identity = 277/296 (93.58%), Postives = 281/296 (94.93%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVVDP 240
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPV VD 
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240

Query: 241 WVPDAQWDAPDVVPAAAAAPVSNVEWGQEQVGAADGWDAAVAPPAPSLEAGAPPAA 297
           WVPDAQW AP+V P AAAA VSN EW QE V AADGW  A+ PPAPSLEA APPA+
Sbjct: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPAS 296

[Close]
BLAST of Cla014530 vs. TrEMBL
Match: A0A0A0L946_CUCSA (40S ribosomal protein SA OS=Cucumis sativus GN=Csa_3G646520 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 7.0e-147
Identity = 264/307 (85.99%), Postives = 275/307 (89.58%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVV-D 240
           ARMVLQMRGT+R GH+WDVMVDLFFYREPEE KEKEEEEAVAPPDYGIAD+G AP+V  D
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 PW---VPDAQWDAPDVVPAAAAA-----PVSNVEWGQEQVG--AADGWDAAVAPPAPSLE 297
            W   + DAQW APD++PA  AA     PVSNVEW QE V   A+DGWDAA  PPAPS E
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

[Close]
BLAST of Cla014530 vs. TrEMBL
Match: A0A0A0K8X1_CUCSA (40S ribosomal protein SA OS=Cucumis sativus GN=Csa_6G016990 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 4.1e-139
Identity = 252/305 (82.62%), Postives = 264/305 (86.56%), Query Frame = 1 

Query: 1   MATGTEQ-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MATG    RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60

Query: 61  LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVVD 240
           LARMVLQMRGT+R GHKWDVMVDLFFYREPEE KE EEEEA+ P D+GIAD+ +AP+  D
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSD 240

Query: 241 PW---VPDAQWDAPDVVPA-AAAAPVSNVEWGQEQVG-AADGWDAAVAPPAP---SLEAG 297
            W   +PDAQW A D +P+ A   P S  EW  E V  AADGWDAA APP P   S E  
Sbjct: 241 QWTSQIPDAQWGAADAIPSPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEGT 300

[Close]
BLAST of Cla014530 vs. TrEMBL
Match: A0A059ARV8_EUCGR (40S ribosomal protein SA OS=Eucalyptus grandis GN=EUGRSUZ_I02137 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 3.5e-130
Identity = 240/307 (78.18%), Postives = 257/307 (83.71%), Query Frame = 1 

Query: 1   MATGTEQ-----RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGK 60
           MATG+       RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGK
Sbjct: 1   MATGSTTAAAPARQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGK 60

Query: 61  TWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ 120
           TWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYT  HAIAGRHTPGTFTNQLQ
Sbjct: 61  TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTNTHAIAGRHTPGTFTNQLQ 120

Query: 121 TSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC 180
           TSF+EPRLLILTDPRTDHQPIKE+ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC
Sbjct: 121 TSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC 180

Query: 181 LFWLLARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP 240
           LFWLLARMVLQMRGT+ PGHKWDVMVDLFFYREPEE K++EEEEA+   DYGI D+ +  
Sbjct: 181 LFWLLARMVLQMRGTITPGHKWDVMVDLFFYREPEEAKQQEEEEAIVAGDYGITDYAAGQ 240

Query: 241 VVVDPW---VPDAQWDAPDVVPAAAAAPVSNVE---WGQEQVGAADGWDAAVAP-PAPSL 296
            + D W   +PD+QW        AAA PV  ++   W +    AADGW+ A AP PAP  
Sbjct: 241 AIPDQWTSQIPDSQW-----ASEAAAPPVPAIQPTGWTETAPVAADGWEIAAAPAPAP-- 299

[Close]
BLAST of Cla014530 vs. TrEMBL
Match: M5W4J8_PRUPE (40S ribosomal protein SA OS=Prunus persica GN=PRUPE_ppa009383mg PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 5.9e-130
Identity = 241/299 (80.60%), Postives = 253/299 (84.62%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MA  +  R LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MANASPPRLLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWDKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW+L
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWIL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVVDP 240
           ARMVLQMRG++RPGHKWDVMVDLFFYREPEE KEKEEEEA    DYGI D+ +A      
Sbjct: 181 ARMVLQMRGSLRPGHKWDVMVDLFFYREPEEAKEKEEEEAATAADYGITDYSAAGDQWPA 240

Query: 241 WVPDAQW--DAPDVVPAAAAAPVSNVEWGQEQVGAADGWDAAVAPPAPSLEAGAPPAAG 298
            V DA W  DAP  +P   AAPV  V W  E V AADGW   V  PAP    GAP A G
Sbjct: 241 QVSDAPWPTDAPAAIP---AAPV--VSWTAEPVAAADGWGEPVPGPAP--VEGAPTATG 292

[Close]
BLAST of Cla014530 vs. NCBI nr
Match: gi|778690612|ref|XP_011653139.1| (PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus])

HSP 1 Score: 569.3 bits (1466), Expect = 3.9e-159
Identity = 277/296 (93.58%), Postives = 281/296 (94.93%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGTEQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVVDP 240
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPV VD 
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240

Query: 241 WVPDAQWDAPDVVPAAAAAPVSNVEWGQEQVGAADGWDAAVAPPAPSLEAGAPPAA 297
           WVPDAQW AP+V P AAAA VSN EW QE V AADGW  A+ PPAPSLEA APPA+
Sbjct: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPAS 296

[Close]
BLAST of Cla014530 vs. NCBI nr
Match: gi|659107547|ref|XP_008453731.1| (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo])

HSP 1 Score: 569.3 bits (1466), Expect = 3.9e-159
Identity = 276/296 (93.24%), Postives = 283/296 (95.61%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVVDP 240
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+ VD 
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WVPDAQWDAPDVVPAAAAAPVSNVEWGQEQVGAADGWDAAVAPPAPSLEAGAPPAA 297
           WVPDAQWDA +V P AAAA VSNVEW QE VGAADGW  A+ PPAPSLEA APP++
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSS 296

[Close]
BLAST of Cla014530 vs. NCBI nr
Match: gi|659120752|ref|XP_008460336.1| (PREDICTED: 40S ribosomal protein SA-like isoform X2 [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 3.4e-147
Identity = 264/305 (86.56%), Postives = 276/305 (90.49%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 73  MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 132

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 133 QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 192

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 193 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 252

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVV-D 240
           ARMVLQMRGT+R GH+WDVMVDLFFYREPEE KEKEEEEAVAPPDYGIAD+G AP+V  D
Sbjct: 253 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 312

Query: 241 PW---VPDAQWDAPDVVPAAAAA----PVSNVEWGQEQVG-AADGWDAAVAPPAPSLEAG 297
            W   + DAQW APD++PA  AA    PVSNVEW QE V  A+DGWDAAV PPAP+ E G
Sbjct: 313 QWAGQISDAQWGAPDLIPAPDAAVVVPPVSNVEWTQEPVALASDGWDAAVPPPAPAAEGG 372

[Close]
BLAST of Cla014530 vs. NCBI nr
Match: gi|449453391|ref|XP_004144441.1| (PREDICTED: 40S ribosomal protein SA [Cucumis sativus])

HSP 1 Score: 528.1 bits (1359), Expect = 1.0e-146
Identity = 264/307 (85.99%), Postives = 275/307 (89.58%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVV-D 240
           ARMVLQMRGT+R GH+WDVMVDLFFYREPEE KEKEEEEAVAPPDYGIAD+G AP+V  D
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 PW---VPDAQWDAPDVVPAAAAA-----PVSNVEWGQEQVG--AADGWDAAVAPPAPSLE 297
            W   + DAQW APD++PA  AA     PVSNVEW QE V   A+DGWDAA  PPAPS E
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

[Close]
BLAST of Cla014530 vs. NCBI nr
Match: gi|659120750|ref|XP_008460335.1| (PREDICTED: 40S ribosomal protein SA-like isoform X1 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 2.9e-146
Identity = 263/306 (85.95%), Postives = 275/306 (89.87%), Query Frame = 1 

Query: 1   MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT T  RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 73  MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 132

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 133 QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 192

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 193 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 252

Query: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVVV-D 240
           ARMVLQMRGT+R GH+WDVMVDLFFYREPEE KEKEEEEAVAPPDYGIAD+G AP+V  D
Sbjct: 253 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 312

Query: 241 PW---VPDAQWDAPDVVPAAAAA----PVSNVEWGQEQVG--AADGWDAAVAPPAPSLEA 297
            W   + DAQW APD++PA  AA    PVSNVEW QE     A+DGWDAAV PPAP+ E 
Sbjct: 313 QWAGQISDAQWGAPDLIPAPDAAVVVPPVSNVEWTQEPAVALASDGWDAAVPPPAPAAEG 372

The following BLAST results are available for this feature:
BLAST of Cla014530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RSSA_VITVI5.2e-12775.5540S ribosomal protein SA OS=Vitis vinifera GN=GSVIVT00034021001 PE=3 SV=1[more]
RSSA_DAUCA9.7e-12677.2640S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1[more]
RSSA_SOYBN3.7e-12580.2840S ribosomal protein SA OS=Glycine max PE=2 SV=1[more]
RSSA_CICAR1.7e-12276.2440S ribosomal protein SA OS=Cicer arietinum GN=RAP40 PE=2 SV=1[more]
RSSA_BRANA7.5e-11875.0940S ribosomal protein SA OS=Brassica napus GN=LRP PE=2 SV=1[more]
BLAST of Cla014530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUD9_CUCSA2.7e-15993.5840S ribosomal protein SA OS=Cucumis sativus GN=Csa_4G038770 PE=3 SV=1[more]
A0A0A0L946_CUCSA7.0e-14785.9940S ribosomal protein SA OS=Cucumis sativus GN=Csa_3G646520 PE=3 SV=1[more]
A0A0A0K8X1_CUCSA4.1e-13982.6240S ribosomal protein SA OS=Cucumis sativus GN=Csa_6G016990 PE=3 SV=1[more]
A0A059ARV8_EUCGR3.5e-13078.1840S ribosomal protein SA OS=Eucalyptus grandis GN=EUGRSUZ_I02137 PE=3 SV=1[more]
M5W4J8_PRUPE5.9e-13080.6040S ribosomal protein SA OS=Prunus persica GN=PRUPE_ppa009383mg PE=3 SV=1[more]
BLAST of Cla014530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778690612|ref|XP_011653139.1|3.9e-15993.58PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus][more]
gi|659107547|ref|XP_008453731.1|3.9e-15993.24PREDICTED: 40S ribosomal protein SA-like [Cucumis melo][more]
gi|659120752|ref|XP_008460336.1|3.4e-14786.56PREDICTED: 40S ribosomal protein SA-like isoform X2 [Cucumis melo][more]
gi|449453391|ref|XP_004144441.1|1.0e-14685.99PREDICTED: 40S ribosomal protein SA [Cucumis sativus][more]
gi|659120750|ref|XP_008460335.1|2.9e-14685.95PREDICTED: 40S ribosomal protein SA-like isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001865Ribosomal_S2
IPR005707Ribosomal_S2_euk/arc
IPR018130Ribosomal_S2_CS
IPR023591Ribosomal_S2_flav_dom_sf
IPR027498Ribosomal_S2_euk
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003824 catalytic activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU58437watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla014530Cla014530.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU58437WMU58437transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 47..56
score: 3.6E-32coord: 96..113
score: 3.6E-32coord: 121..138
score: 3.6E-32coord: 159..173
score: 3.6E-32coord: 17..35
score: 3.6E-32coord: 138..149
score: 3.6
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 119..184
score: 8.6E-13coord: 20..114
score: 1.6
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 5..292
score: 1.5E
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMsTIGR01012TIGR01012coord: 12..208
score: 6.3
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 17..28
scor
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 121..145
scor
IPR023591Ribosomal protein S2, flavodoxin-like domainunknownSSF52313Ribosomal protein S2coord: 12..202
score: 1.83
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 2..269
score: 50
NoneNo IPR availableGENE3DG3DSA:3.40.50.10490coord: 32..217
score: 1.1
NoneNo IPR availablePANTHERPTHR11489:SF940S RIBOSOMAL PROTEIN SAcoord: 5..292
score: 1.5E