CsaV3_4G004220 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G004220
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Ubiquitin carboxyl-terminal hydrolase 12
Location	chr4 : 2634278 .. 2637198 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAATGAAGAAAGAAAAGCAAATCAAACATTGAGATTATTATGGATGATAATATGTCATATGATGATACTACAAAAATAGATGAACGACAACACGGTATATTACTACTTCAAATTATTTTATTATATTGTTAACTTTATATCCACTTCTCTTAGTGTCCAATATTTTTTTCGATTATGTTATTTGCAACCTAAGTACACAAGGTTTGGCAAACTTTAGAAGAAAAGAATAATAACCCAAATTATTTTGGTTTACTAATGTTGATATTATTTAATTTAATTTGCATATCTTTTTTTTTATGCAGAAATTACAATTAAATCGAGGAGGGTTGATCCACCATCTCATTATGCATTTCAAATTGATTCTTACTCGGTGCTTTCACAAATTGAGATGAAGAAATGTGAATCTGGAGACTTTGAAGTTGACGGCTACAAGTGGTAAATTTGGGAACCAAACTTATAATTTTGAAAATACTTTATATTTTAGATTGAAATTAAACATGATTTAATATATCATATCAACTAGGGTTTAAGGCATCATAATTAATTAATCTCTCTATTTCTTATATATATGTGTGTGCTAGGAAATTAATTTTATATCCAAATGGAAACGAAGAAGTGGAAGATCATATTTCTCTCTTCTTGGCTGTATCAACTAATGATAATAATCTTCCTCTTGGTTGGGAACTGAGGGTAATTTTCAGATTCTTTATATTTGATCAAATCAGAGATAACTATTTAACAATCCAAGGTAATTTTTTTCATATTACTTTTCTAATTATATGGTGTTCTTACTGATCTTGTTGTCATCTGCATGTTTCTTGTTAAAAATATTAAAGGTCGAGAGACTCAGGCGAACCTATAATAAAATAAACAAAACCCTAAACCCTAGAAATATGTATTGGTTTTGCAGATGGGAAAATGAGGAAGTATTCTAAAATGAAGAGTGAACATGGATTCACTCACTTGATTTCTCATAATGTTTTCAATAAAGCCTCCAGTGGCTTCCTTGTGAGTAATTGTTGTACATTTGGGGTTGAAGTTTCTATACTTAAAGCCTCAAACAAGGGAGAGAGATTAACCATTTTAAAAGAGCCTCAACAAGACACTTATTTTTGGACTCTATACTCATTTTCTGCTTTAAAGCAACCATTTTATATCTCAGAACCCTTCAATGTCAAAGGAAGAAAATGGTTAGTGAAAAAAGCTCCTGTAAACTAATCTTTTGTGTTTTATCTTTTTCAAAAACTACCAATTTAAATGCTTAAAATTTTAGGAGTTATGTATCAAATTAAACCCTAAATTTATTTTGTGGATGCATCAATTTATGCCATTGATTACATAGTTTAGAAAAATCTAGCGTGAAAGTTTTGGTTTTGAACAAGAAACTAAAAGGACGTGATGAATCAATTTATAATTCATCAATGAATGAATGTAACTTTTCTAAGTGATCTGGATTCCCTTGAATTAGTATAGTACAATTTGTAAAAATTGACATTTAAAAAAGTATGCATTTGTTTTGAGAAGTAATGTATTAATAATTTTCAAAGGCACATAGTACTGAATGTATGAAAATTAAAGAGTTTAATTGACTAACTCAAAAACTTAGGATTTAAAATTTATACAATTAATATAACTTTAAAGTTTAAGTATAAATTGAATCTTTACAGAAAAAAAAAAAAAAAAAGTCTGACTCCTTATCTTTGTTTTGATTTATTAGGAGAATGGAGGTGTACCCACATGGTAATTCCTTGGGAAAGACTTCACATATATCTCTTTACTTGAAGTTGGATAGTTCAGAGACCATTCCTTTGGGGAAGAAAATCTATGCAAAATTTATCCTTGGTGTTTATAACTTTTCAGCCAAAAAATATATTGACAAATCATGTAAGGTCTTTTAATTGAAATTAATTTCCAAATATTTTTTTCTCTTTAGGTTCTTATGTTATGTGACATTATTATTATTATTATAATTGGATTTTGCAGATGAACATTGGTATAAAACCCCAGGTCATGGCAATGGTTTTGATGAGTTCTTGTCCAGAAAAGAAATTAGTACTCATTCGCAAAATGATGCTTTCTATCTCAAAGCTAGAATTGTGGCCATGTCAACTGTGGAAGAATTTTGATAATTCATGGGCATCATTTATCTTGAAAGTTTACAATGTCGTCTACGCTTAGACATTATTACTGCACATGATATTGAATTGTGTTTAAAGTAATATAATGTTGGTAAATAAATAATGGACTTGAGCTAGATGTTAATTATTTCTCTCCCCCTCCTTATCTTGTTTCCATATATCTATTCTTAAATAATGAAGATGAATTTTTCTTTTTGTAATAAACAAAGGGAGAGACAATGGTAAGAGTTTAGAAACACACTCCTGTTTGACTACAAGAACTCTATGGTATGCACCTCTCCAACAGAGTACAACAGTTGCATGCCATTATCTCTCCAATTGATATTATTGACGACGTACAAAACTGTGTTTTATTTCTCTTGGACGTAATTAAAAGCAGACAATGCCTAGTTTAGAAATGACGAACTGCAGAAACTGTTGACAACAACGGCTGTCTTCTCCAATGAGTATTGTGTTACCTTCTGATCTCCAGGGTCTTAAGAGAGGGGATGATGCATAAAGTTGGGTGCGTGGGAATGAGAGAGAGAGGAAGAATGAAATTAGGTTTCTAATTTTTTCAGTTTTTTCTTAATTTTATTTGTACGTGTTTTTATATTTATATTTGTTTCATTATTCCATGTCGTTAACGTATTTGGTCCTTATTATTTGTTAAAAGTTACTATTAGGTTCTCGTACTTTCAAAAGTAATGAACAATTTAGTTCTTATACTTTAAATTGATTACGATATTAAGTCTTTATCGTTGAAGGTGATATTAATATTTACCAGAAATTTGATGTTGC

mRNA sequence

ATGGATGATAATATGTCATATGATGATACTACAAAAATAGATGAACGACAACACGAAATTACAATTAAATCGAGGAGGGTTGATCCACCATCTCATTATGCATTTCAAATTGATTCTTACTCGGTGCTTTCACAAATTGAGATGAAGAAATGTGAATCTGGAGACTTTGAAGTTGACGGCTACAAGTGGAAATTAATTTTATATCCAAATGGAAACGAAGAAGTGGAAGATCATATTTCTCTCTTCTTGGCTGTATCAACTAATGATAATAATCTTCCTCTTGGTTGGGAACTGAGGGTAATTTTCAGATTCTTTATATTTGATCAAATCAGAGATAACTATTTAACAATCCAAGATGGGAAAATGAGGAAGTATTCTAAAATGAAGAGTGAACATGGATTCACTCACTTGATTTCTCATAATGTTTTCAATAAAGCCTCCAGTGGCTTCCTTGTGAGTAATTGTTGTACATTTGGGGTTGAAGTTTCTATACTTAAAGCCTCAAACAAGGGAGAGAGATTAACCATTTTAAAAGAGCCTCAACAAGACACTTATTTTTGGACTCTATACTCATTTTCTGCTTTAAAGCAACCATTTTATATCTCAGAACCCTTCAATGTCAAAGGAAGAAAATGGAGAATGGAGGTGTACCCACATGGTAATTCCTTGGGAAAGACTTCACATATATCTCTTTACTTGAAGTTGGATAGTTCAGAGACCATTCCTTTGGGGAAGAAAATCTATGCAAAATTTATCCTTGGTGTTTATAACTTTTCAGCCAAAAAATATATTGACAAATCATATGAACATTGGTATAAAACCCCAGGTCATGGCAATGGTTTTGATGAGTTCTTGTCCAGAAAAGAAATTAGTACTCATTCGCAAAATGATGCTTTCTATCTCAAAGCTAGAATTGTGGCCATGTCAACTGTGGAAGAATTTTGA

Coding sequence (CDS)

ATGGATGATAATATGTCATATGATGATACTACAAAAATAGATGAACGACAACACGAAATTACAATTAAATCGAGGAGGGTTGATCCACCATCTCATTATGCATTTCAAATTGATTCTTACTCGGTGCTTTCACAAATTGAGATGAAGAAATGTGAATCTGGAGACTTTGAAGTTGACGGCTACAAGTGGAAATTAATTTTATATCCAAATGGAAACGAAGAAGTGGAAGATCATATTTCTCTCTTCTTGGCTGTATCAACTAATGATAATAATCTTCCTCTTGGTTGGGAACTGAGGGTAATTTTCAGATTCTTTATATTTGATCAAATCAGAGATAACTATTTAACAATCCAAGATGGGAAAATGAGGAAGTATTCTAAAATGAAGAGTGAACATGGATTCACTCACTTGATTTCTCATAATGTTTTCAATAAAGCCTCCAGTGGCTTCCTTGTGAGTAATTGTTGTACATTTGGGGTTGAAGTTTCTATACTTAAAGCCTCAAACAAGGGAGAGAGATTAACCATTTTAAAAGAGCCTCAACAAGACACTTATTTTTGGACTCTATACTCATTTTCTGCTTTAAAGCAACCATTTTATATCTCAGAACCCTTCAATGTCAAAGGAAGAAAATGGAGAATGGAGGTGTACCCACATGGTAATTCCTTGGGAAAGACTTCACATATATCTCTTTACTTGAAGTTGGATAGTTCAGAGACCATTCCTTTGGGGAAGAAAATCTATGCAAAATTTATCCTTGGTGTTTATAACTTTTCAGCCAAAAAATATATTGACAAATCATATGAACATTGGTATAAAACCCCAGGTCATGGCAATGGTTTTGATGAGTTCTTGTCCAGAAAAGAAATTAGTACTCATTCGCAAAATGATGCTTTCTATCTCAAAGCTAGAATTGTGGCCATGTCAACTGTGGAAGAATTTTGA

Protein sequence

MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDGYKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDGKMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEPQQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSETIPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQNDAFYLKARIVAMSTVEEF

Homology

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BLAST of CsaV3_4G004220 vs. NCBI nr
Match: XP_011653084.1 (PREDICTED: probable inactive serine/threonine-protein kinase fnkC [Cucumis sativus] >KGN53168.1 hypothetical protein Csa_4G023030 [Cucumis sativus])

HSP 1 Score: 649.0 bits (1673), Expect = 8.0e-183
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG 60
           MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG
Sbjct: 1   MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG 60

Query: 61  YKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDG 120
           YKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDG
Sbjct: 61  YKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDG 120

Query: 121 KMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEP 180
           KMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEP
Sbjct: 121 KMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEP 180

Query: 181 QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET 240
           QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET
Sbjct: 181 QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET 240

Query: 241 IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQNDAFY 300
           IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQNDAFY
Sbjct: 241 IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQNDAFY 300

Query: 301 LKARIVAMSTVEEF 315
           LKARIVAMSTVEEF
Sbjct: 301 LKARIVAMSTVEEF 314

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BLAST of CsaV3_4G004220 vs. NCBI nr
Match: XP_008453868.1 (PREDICTED: uncharacterized protein LOC103494460 isoform X1 [Cucumis melo])

HSP 1 Score: 590.9 bits (1522), Expect = 2.6e-165
Identity = 286/315 (90.79%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG 60
           MDDNMSYD++ K DERQHEITIKSRRVDPPSHYAFQIDSYSVLS+IEMKKCESGDFEVDG
Sbjct: 1   MDDNMSYDESIK-DERQHEITIKSRRVDPPSHYAFQIDSYSVLSEIEMKKCESGDFEVDG 60

Query: 61  YKWKLILYPNGNEEVEDHISLFLAVSTND-NNLPLGWELRVIFRFFIFDQIRDNYLTIQD 120
           Y WKLILYPNGN EVEDHISLFLA+STND NNLPLGWE+RVIFRFFIFDQIRDNYLTIQD
Sbjct: 61  YMWKLILYPNGNGEVEDHISLFLAISTNDNNNLPLGWEVRVIFRFFIFDQIRDNYLTIQD 120

Query: 121 GKMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKE 180
           GKMRKYSKMKSEHGFTHLISHNVF+KAS+GFLV+N CTFGVEVSILKASNKGERLTI +E
Sbjct: 121 GKMRKYSKMKSEHGFTHLISHNVFSKASNGFLVNNSCTFGVEVSILKASNKGERLTIFRE 180

Query: 181 PQQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSE 240
           PQQDTYFWTLYSFSA     YISEPFNVKGRKWRME+YP+GNSLGKTSHISLYLKLD+SE
Sbjct: 181 PQQDTYFWTLYSFSAKTNQSYISEPFNVKGRKWRMEIYPNGNSLGKTSHISLYLKLDNSE 240

Query: 241 TIPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQNDAF 300
           TIPLGKKIYAKF+LGVYNFSAKKYIDKSYEHW+KTPGHG+GFDEFLSR+EISTHSQNDAF
Sbjct: 241 TIPLGKKIYAKFLLGVYNFSAKKYIDKSYEHWFKTPGHGDGFDEFLSRREISTHSQNDAF 300

Query: 301 YLKARIVAMSTVEEF 315
           YLKARIVAMSTV+EF
Sbjct: 301 YLKARIVAMSTVDEF 314

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BLAST of CsaV3_4G004220 vs. NCBI nr
Match: XP_023529004.1 (speckle-type POZ protein-like A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456.4 bits (1173), Expect = 7.6e-125
Identity = 220/315 (69.84%), Postives = 264/315 (83.81%), Query Frame = 0


Query: 1   MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG 60
           M DNMSYDD  K  E+Q EIT ++RRV+PP++Y FQI+SYS LS+I MKKCESG+F VDG
Sbjct: 1   MVDNMSYDDPIK-REQQPEIT-RTRRVEPPANYTFQINSYSTLSEIGMKKCESGNFAVDG 60

Query: 61  YKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDG 120
           Y WKLILYPNG++EVEDHISL+LA+ + D NLPLGWE++VIFRFF++D+I+DNYLT+QDG
Sbjct: 61  YNWKLILYPNGDDEVEDHISLYLAIISKD-NLPLGWEVKVIFRFFVYDRIKDNYLTVQDG 120

Query: 121 KMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEP 180
           KMRKYSKMKSEHGFT  ++HN FN+AS+GFLV N CTFGVEVS+LKASNKGE LTI KEP
Sbjct: 121 KMRKYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLKASNKGESLTIFKEP 180

Query: 181 QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET 240
           Q  ++FW++ SFS     FY+SEPF VKGRKWR+ +YP+G S GKTSHISLYLKLDSSET
Sbjct: 181 QLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTSHISLYLKLDSSET 240

Query: 241 IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHS-QNDAF 300
           +P GKKIYAKF L VYNF AKKY+D+S E+W+    +G+GF EFLSR ++  H  QND F
Sbjct: 241 VPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGHGFHEFLSRNDLQPHHLQNDVF 300

Query: 301 YLKARIVAMSTVEEF 315
           YLKARIVAMS VE+F
Sbjct: 301 YLKARIVAMSVVEDF 312

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BLAST of CsaV3_4G004220 vs. NCBI nr
Match: XP_022989347.1 (uncharacterized protein LOC111486429 [Cucurbita maxima])

HSP 1 Score: 450.3 bits (1157), Expect = 5.4e-123
Identity = 218/315 (69.21%), Postives = 261/315 (82.86%), Query Frame = 0


Query: 1   MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG 60
           M DNMSYDD  K  E+Q EIT ++ RVDPP++Y FQI+SYS LS+I MKKCESG F VDG
Sbjct: 1   MVDNMSYDDPIK-HEQQPEIT-RTTRVDPPANYIFQINSYSTLSEIGMKKCESGHFAVDG 60

Query: 61  YKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDG 120
           Y WKLIL+PNG+++VEDHISL+LA+++ D NLPLGWE++VIFRFF++DQI+DNYLTIQDG
Sbjct: 61  YNWKLILFPNGDDKVEDHISLYLAITSKD-NLPLGWEVKVIFRFFVYDQIKDNYLTIQDG 120

Query: 121 KMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEP 180
           KMRKYSKMK+EHGFT  ++HN FN+AS+GFLV N CTFGVEVS+LKASNKGE LTI KEP
Sbjct: 121 KMRKYSKMKTEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLKASNKGESLTIFKEP 180

Query: 181 QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET 240
           Q  ++FW++ SFS     FY SEPF VKGRKWR+ +YP+G   GKTSHISLYLKLDSSET
Sbjct: 181 QLGSFFWSISSFSNKNNEFYFSEPFTVKGRKWRLMIYPNGFLSGKTSHISLYLKLDSSET 240

Query: 241 IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHS-QNDAF 300
           IP GKKIYAKF L VYNF AKKY+D+S E+W+    +G+GF EFLSR ++  H  QND F
Sbjct: 241 IPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGHGFHEFLSRNDLQPHHLQNDVF 300

Query: 301 YLKARIVAMSTVEEF 315
           YLKARIVAMS V++F
Sbjct: 301 YLKARIVAMSVVQDF 312

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BLAST of CsaV3_4G004220 vs. NCBI nr
Match: XP_022941740.1 (speckle-type POZ protein-like A [Cucurbita moschata])

HSP 1 Score: 448.0 bits (1151), Expect = 2.7e-122
Identity = 215/315 (68.25%), Postives = 261/315 (82.86%), Query Frame = 0


Query: 1   MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG 60
           M DNMSYDD  K  E+Q EIT ++RR +PP++Y FQI+SYS LS+I MKKCESG+F VDG
Sbjct: 1   MVDNMSYDDPIK-HEQQPEIT-RTRRAEPPANYTFQINSYSTLSEIGMKKCESGNFAVDG 60

Query: 61  YKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDG 120
           + WKLILYPNG++EVEDHISL+LA+++ D NLPLGWE++VIFRFF++D+I+DNYLT+QDG
Sbjct: 61  FNWKLILYPNGDDEVEDHISLYLAITSKD-NLPLGWEVKVIFRFFVYDRIKDNYLTVQDG 120

Query: 121 KMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEP 180
           KMRKYSKMKSEHGFT  ++HN FN+AS+GFLV N CTFGVEVS+LKASNKGE LTI KEP
Sbjct: 121 KMRKYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLKASNKGESLTIFKEP 180

Query: 181 QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET 240
           Q  ++FW++ SFS     FY+SEPF VKGRKWR+ +YP+G S GK SHISLYLKLDSSET
Sbjct: 181 QLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKMSHISLYLKLDSSET 240

Query: 241 IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHS-QNDAF 300
           +P GKKIYAKF L VY+F AK+Y+D+S EHW+    +G GF EFLSR ++  H  QND F
Sbjct: 241 VPTGKKIYAKFFLSVYDFGAKRYVDQSNEHWFDNTTYGYGFHEFLSRNDLRPHHLQNDGF 300

Query: 301 YLKARIVAMSTVEEF 315
           YLKARI AMS VE+F
Sbjct: 301 YLKARIAAMSVVEDF 312

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BLAST of CsaV3_4G004220 vs. TAIR10
Match: AT3G17380.1 (TRAF-like family protein)

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-49
Identity = 96/269 (35.69%), Postives = 163/269 (60.59%), Query Frame = 0


Query: 22  IKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDGYKWKLILYPNGN--EEVEDHI 81
           IKS    PP+HY  +I+S+S+L++  +++ E+  FE  GYKWKL+LYPNGN  +  +DH+
Sbjct: 11  IKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKDHV 70

Query: 82  SLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDGKMRKYSKMKSEHGFTHLIS 141
           S++L+++ + ++L  GWE+  +FR ++ DQ +DNYL +Q G  R++  +K E GF   I 
Sbjct: 71  SVYLSLA-DSSSLSPGWEVYAVFRLYLLDQNKDNYLILQ-GNERRFHSVKREWGFDKFIP 130

Query: 142 HNVFNKASSGFLVSNCCTFGVEVSILK--ASNKGERLTILKEPQQDTYFWTLYSFSALKQ 201
              F+ AS+G+L+ + C FG +V + K   S +GE L+++K+     + W + +FS L +
Sbjct: 131 TGTFSDASNGYLMEDTCMFGADVFVSKERRSGRGECLSMIKDATSSKHVWKIENFSKLDK 190

Query: 202 PFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSETIPLGKKIYAKFILGVYN 261
             Y S  F    RKW++E YP G   G  +H+S+YL L   ETI  G KI+ +F + +++
Sbjct: 191 ESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSIYLTLVDPETISDGTKIFVEFTIRIFD 250

Query: 262 FSAKKYIDKSYEHWYKTPGHGNGFDEFLS 287
               ++I      W+      +G+ +++S
Sbjct: 251 QLQGRHIAGKVTKWFSRSSSEHGWVKYVS 277

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BLAST of CsaV3_4G004220 vs. TAIR10
Match: AT3G20370.1 (TRAF-like family protein)

HSP 1 Score: 152.5 bits (384), Expect = 4.3e-37
Identity = 93/321 (28.97%), Postives = 168/321 (52.34%), Query Frame = 0


Query: 9   DTTKIDERQHEIT----IKSRRVDPPSHYAFQIDSY-SVLSQIEMKKCESGDFEVDGYKW 68
           +  +I  R ++++    +K  R  PPS Y+ +++S+ ++L     +K  S  F V GY W
Sbjct: 60  ENKEISSRDYKVSASNAVKGLRDRPPSSYSLKMESFNTLLKSTYTEKYVSRPFSVGGYNW 119

Query: 69  KLILYPNGN--EEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDGK 128
            L+++PNGN  +    ++SL++A+   DN+     E+    RF+IF++    Y TIQD  
Sbjct: 120 TLVVFPNGNKKDSGSGYLSLYVAI---DNSTLGQQEIYADLRFYIFNKNERKYFTIQDTD 179

Query: 129 MRKYSKMKSEHGFTHLISHNVFNKASSGFLV-SNCCTFGVEVSILKASNKGERLTILKEP 188
           + K+S  K+  GF+ ++  + F   + G+L   + C FGV+V++     K E  ++ +  
Sbjct: 180 VWKFSVFKTMWGFSQVLPIDTFKDPTKGYLYDGDHCEFGVDVTMPSLYEKSELFSVTENF 239

Query: 189 QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET 248
               + WT+  FS L +  Y+SE F++ GR W +++ P G   G+   +S+YL L+ +E 
Sbjct: 240 LNPRFTWTIRGFSTLLKNSYLSEVFSIGGRSWNIQINPSGLGTGEGKALSMYLGLNVNEI 299

Query: 249 IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGN---GFDEFLSRKEISTHS--- 308
               +KIY +  L   N      I++  + WY  PG+G    GF EF+    ++  S   
Sbjct: 300 FRPYEKIYVRAKLRALNQLNLSNIERELDIWYNGPGYGEYSWGFPEFIYFPYLTDSSKGF 359

Query: 309 -QNDAFYLKARIVAMSTVEEF 315
            +ND   ++  + A+S+ + F
Sbjct: 360 VKNDVLMVQVEMEAISSTKYF 377

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BLAST of CsaV3_4G004220 vs. TAIR10
Match: AT5G26280.1 (TRAF-like family protein)

HSP 1 Score: 152.5 bits (384), Expect = 4.3e-37
Identity = 89/291 (30.58%), Postives = 148/291 (50.86%), Query Frame = 0


Query: 26  RVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDGYKWKLILYPNGNEE--VEDHISLFL 85
           R + PS     I S+SV+     +  ES  FE  GYKW+L+LY NGN+     DHISL+ 
Sbjct: 55  REERPSSKIVTITSFSVIKG-RGEPYESSVFEAAGYKWRLVLYVNGNKNDGGNDHISLYA 114

Query: 86  AVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDGKMRKYSKMKSEHGFTHLISHNVF 145
            +    N+LPLGWE+ V  + F+ +     YLT+ DG +++Y+  K E GF  LI  + F
Sbjct: 115 RIE-ETNSLPLGWEVNVDLKLFVHNGKLHKYLTVTDGLVKRYNNAKKEWGFGQLIPRSTF 174

Query: 146 NKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEPQQDTYFWTLYSFSALKQPFYISE 205
             A+ G+L  +  +FG E+ I+K + + E++T +  P  + + W +  FS L+  FY S+
Sbjct: 175 YNANEGYLDQDTGSFGAEIFIVKPAQQQEKVTFISNPPNNVFTWKILRFSTLEDKFYYSD 234

Query: 206 PFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSETIPLGKKIYAKFILGVYNFSAKKY 265
            F V+ R WR+   P G+  G+   + ++L     +   +    +    L + N  +  +
Sbjct: 235 DFLVEDRYWRLGFNPKGDGGGRPHALPIFLFAQGHKANAVATNTWGAVNLRLKNQRSTNH 294

Query: 266 IDKSYEHWYKT-PGHGNGFDEFLSRKEISTHSQ----NDAFYLKARIVAMS 310
                  WY    G+G G +  +   +++  S+    NDA   +A +V +S
Sbjct: 295 RQIYSAAWYPIGSGYGVGVNNIILLADLNDASKGYLVNDAIIFEAEMVKVS 343

[Close]

BLAST of CsaV3_4G004220 vs. TAIR10
Match: AT5G26260.1 (TRAF-like family protein)

HSP 1 Score: 152.5 bits (384), Expect = 4.3e-37
Identity = 92/313 (29.39%), Postives = 154/313 (49.20%), Query Frame = 0


Query: 4   NMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDGYKW 63
           N SY  T+ +      +T +  R + PS     I S+SV+     +  ES  FE  GYKW
Sbjct: 39  NNSYSLTSNLG-----VTTRELRDERPSSKIVTITSFSVIKD-RGEPYESSIFEAAGYKW 98

Query: 64  KLILYPNGNEE--VEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDGK 123
           +L+LY  GN +  + +HISL+  +   +  LP GWE+ V  + F+ ++    YL++ DG 
Sbjct: 99  RLVLYVKGNPKGGINNHISLYARIEETE-TLPRGWEVNVDLKLFVHNRKLKKYLSVTDGT 158

Query: 124 MRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEPQ 183
           +++Y+  K E GFT LIS   F  A+ G+LV +  +FG E+ I+  + K E++T +  P 
Sbjct: 159 VKRYNDAKKEWGFTQLISLPTFYNANEGYLVQDTASFGAEIFIVNPTEKQEKVTFISNPP 218

Query: 184 QDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSETI 243
            + + W +  FS L+  FY S+ F V  R WR+   P G+  G+   + ++L     +  
Sbjct: 219 DNVFTWKILRFSTLEDKFYYSDDFLVGDRYWRLGFNPKGSGGGRPHALPIFLYAQGHKAN 278

Query: 244 PLGKKIYAKFILGVYNFSAKKYIDKSYEHWYK-TPGHGNGFDEFLSRKEISTHSQ----N 303
            +    +    L + N  +  +       WY     +G G +  +   E+   S+    N
Sbjct: 279 AVVTNTWGAVNLRLKNQRSSNHKQLYSAAWYPIRSDYGVGVNNIILMSELKDASKGYMVN 338

Query: 304 DAFYLKARIVAMS 310
           DA   +A +V +S
Sbjct: 339 DAIIFEAEMVKVS 344

[Close]

BLAST of CsaV3_4G004220 vs. TAIR10
Match: AT4G09770.1 (TRAF-like family protein)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 82/274 (29.93%), Postives = 146/274 (53.28%), Query Frame = 0


Query: 26  RVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDGYKWKLILYPNG--NEEVEDHISLFL 85
           R + PS Y  ++  +S + +   +  ES DF+V G+KW+LI YP G   E  +DH+S++ 
Sbjct: 5   REEAPSSYLMKLVGFSEV-KFSHQPYESADFDVGGHKWRLIFYPAGKLEEGGKDHVSIYA 64

Query: 86  AVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDGKMRKYSKMKSEHGFTHLISHNVF 145
            +     ++ +  EL    +FFI++     Y   QDG M+ Y+K K E GF  ++  + F
Sbjct: 65  RIENVGASMQIDAEL----KFFIYNHNNKQYSVFQDGTMKHYNKEKKECGFAQMLLFSKF 124

Query: 146 NKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEPQQDTYFWTLYSFSAL-KQPFYIS 205
           N   +G++  N C  GVE+ ++K   K ER+   + P ++ + W +  FS +  + +Y S
Sbjct: 125 NDPKNGYIDGNACIVGVEIFVIKPIEKVERVVFTQNPPENKFTWKISHFSYIGDKRYYYS 184

Query: 206 EPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSETIPLGKKIYAKFILGVYNFSAKK 265
           + F V  RKWR+++ P G+   K   +S+Y++  +     +    YAK  L + N     
Sbjct: 185 DEFVVGDRKWRLKISPKGDK--KVRALSVYVQAMAYLPNAVASSTYAKLRLRLLNQKNSN 244

Query: 266 YIDKSYEHWY-KTPGHGNGFDEFLSRKEISTHSQ 296
           +I+K   H+Y +  G G+G  E +S ++++  S+
Sbjct: 245 HIEKRVFHFYSRENGDGSGISELISVEDLNDESK 271

[Close]

BLAST of CsaV3_4G004220 vs. Swiss-Prot
Match: sp|Q9M2J1|MCC19_ARATH (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.9e-11
Identity = 38/123 (30.89%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 44  SQIEMKKCESGDFEVDGYKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFR 103
           S ++ +K  S  F +DG +W+L+ +P GN+   DH+SL+L V+ ++ +LP GW     F 
Sbjct: 19  SSLQSEKIYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLYLDVAESE-SLPCGWRRHAQFS 78

Query: 104 FFIFDQIRDNYLTIQDGKMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVS 163
           F I + I +   + +   +  + +  S+ GFT+L+         SGFLV       VE+ 
Sbjct: 79  FTIVNHIPEK-CSQRKETIHWFCEKVSDWGFTNLVPLIELKAEDSGFLVKGELKIVVEIE 138

Query: 164 ILK 167
           +L+
Sbjct: 139 VLE 139

[Close]

BLAST of CsaV3_4G004220 vs. Swiss-Prot
Match: sp|Q9M2I9|MCC21_ARATH (MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis thaliana OX=3702 GN=At3g58270 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.2e-10
Identity = 41/127 (32.28%), Postives = 67/127 (52.76%), Query Frame = 0


Query: 44  SQIEMKKCESGDFEVDGYKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFR 103
           S  + +K  S +F VDG KW+L+ +P GN    + +SL+LAV+ ++  LP GW     F 
Sbjct: 17  SSQQSRKNYSDEFFVDGCKWRLLAFPKGNG--VEKLSLYLAVAGSE-FLPDGWRRHAYFH 76

Query: 104 FFIFDQIRDNYLTIQDGKMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVS 163
           F + +Q+ D     ++ K   +    S+ GFT ++S    +    GFLV+      V+VS
Sbjct: 77  FSVVNQLSDELSQARETK-NWFDASTSDWGFTSMLSLKKLHDKDGGFLVNGELKIVVDVS 136

Query: 164 ILKASNK 171
           +L+   K
Sbjct: 137 VLEVIGK 139

[Close]

BLAST of CsaV3_4G004220 vs. Swiss-Prot
Match: sp|Q9FPT1|UBP12_ARATH (Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 8.0e-09
Identity = 37/133 (27.82%), Postives = 66/133 (49.62%), Query Frame = 0


Query: 185 YFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSETIPLG 244
           + WT+ +FS      + S+ F V G KWR+ ++P GN++    H+S+YL +  + ++P G
Sbjct: 57  FTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVSDAASLPYG 116

Query: 245 KKIYAKFILGVYNFSAKKY-IDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQ----NDAF 304
              YA+F L V N    +Y + K  +H +       GF  F+   E+   S+    ND  
Sbjct: 117 WSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTV 176

Query: 305 YLKARIVAMSTVE 313
            ++A +     ++
Sbjct: 177 LVEAEVAVRKVLD 186

[Close]

BLAST of CsaV3_4G004220 vs. Swiss-Prot
Match: sp|Q84WU2|UBP13_ARATH (Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.0e-09
Identity = 37/140 (26.43%), Postives = 68/140 (48.57%), Query Frame = 0


Query: 178 KEPQQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDS 237
           ++P    + WT+  F+ L    + S+ F V G KWR+ ++P GN++    H+S+YL +  
Sbjct: 49  EDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVAD 108

Query: 238 SETIPLGKKIYAKFILGVYNFSAKKY-IDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQ- 297
           +  +P G   Y++F L V N    +Y I K  +H +       GF  F+   E+   ++ 
Sbjct: 109 AANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRG 168

Query: 298 ---NDAFYLKARIVAMSTVE 313
              ND   ++A +     ++
Sbjct: 169 YLVNDTVLIEAEVAVRKVLD 185

[Close]

BLAST of CsaV3_4G004220 vs. Swiss-Prot
Match: sp|F4J4A1|MCC14_ARATH (MATH domain and coiled-coil domain-containing protein At3g44800 OS=Arabidopsis thaliana OX=3702 GN=At3g44800 PE=4 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-08
Identity = 42/139 (30.22%), Postives = 67/139 (48.20%), Query Frame = 0


Query: 44  SQIEMKKCESGDFEVDGYKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFR 103
           S ++ +  +S  F + G KW L+ YPNG +    ++SL+L   T    LP G   R+ FR
Sbjct: 14  SSLQSEYIKSDIFVIGGCKWCLLAYPNGKQNA-SYLSLYLDGPTL-KTLPCGCRRRIRFR 73

Query: 104 FFIFDQIRDNYLTIQDGKMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVS 163
             + +Q+ +N     +GK R + K     G+  ++     N    GFLV+N      EV 
Sbjct: 74  LTVVNQLSENLSRRGEGK-RWFDKKLPLCGYEEVLLLTKLNAKHGGFLVNNEVKIVAEVD 133

Query: 164 ILKASNKGERLTILKEPQQ 183
           +L+   K   L + KE Q+
Sbjct: 134 VLEVIGK---LDVSKESQE 146

[Close]

BLAST of CsaV3_4G004220 vs. TrEMBL
Match: tr|A0A0A0KUE1|A0A0A0KUE1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G023030 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 5.3e-183
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG 60
           MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG
Sbjct: 1   MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG 60

Query: 61  YKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDG 120
           YKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDG
Sbjct: 61  YKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDG 120

Query: 121 KMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEP 180
           KMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEP
Sbjct: 121 KMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEP 180

Query: 181 QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET 240
           QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET
Sbjct: 181 QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET 240

Query: 241 IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQNDAFY 300
           IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQNDAFY
Sbjct: 241 IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQNDAFY 300

Query: 301 LKARIVAMSTVEEF 315
           LKARIVAMSTVEEF
Sbjct: 301 LKARIVAMSTVEEF 314

[Close]

BLAST of CsaV3_4G004220 vs. TrEMBL
Match: tr|A0A1S3BYG6|A0A1S3BYG6_CUCME (uncharacterized protein LOC103494460 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494460 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 1.7e-165
Identity = 286/315 (90.79%), Postives = 303/315 (96.19%), Query Frame = 0


Query: 1   MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG 60
           MDDNMSYD++ K DERQHEITIKSRRVDPPSHYAFQIDSYSVLS+IEMKKCESGDFEVDG
Sbjct: 1   MDDNMSYDESIK-DERQHEITIKSRRVDPPSHYAFQIDSYSVLSEIEMKKCESGDFEVDG 60

Query: 61  YKWKLILYPNGNEEVEDHISLFLAVSTND-NNLPLGWELRVIFRFFIFDQIRDNYLTIQD 120
           Y WKLILYPNGN EVEDHISLFLA+STND NNLPLGWE+RVIFRFFIFDQIRDNYLTIQD
Sbjct: 61  YMWKLILYPNGNGEVEDHISLFLAISTNDNNNLPLGWEVRVIFRFFIFDQIRDNYLTIQD 120

Query: 121 GKMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKE 180
           GKMRKYSKMKSEHGFTHLISHNVF+KAS+GFLV+N CTFGVEVSILKASNKGERLTI +E
Sbjct: 121 GKMRKYSKMKSEHGFTHLISHNVFSKASNGFLVNNSCTFGVEVSILKASNKGERLTIFRE 180

Query: 181 PQQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSE 240
           PQQDTYFWTLYSFSA     YISEPFNVKGRKWRME+YP+GNSLGKTSHISLYLKLD+SE
Sbjct: 181 PQQDTYFWTLYSFSAKTNQSYISEPFNVKGRKWRMEIYPNGNSLGKTSHISLYLKLDNSE 240

Query: 241 TIPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQNDAF 300
           TIPLGKKIYAKF+LGVYNFSAKKYIDKSYEHW+KTPGHG+GFDEFLSR+EISTHSQNDAF
Sbjct: 241 TIPLGKKIYAKFLLGVYNFSAKKYIDKSYEHWFKTPGHGDGFDEFLSRREISTHSQNDAF 300

Query: 301 YLKARIVAMSTVEEF 315
           YLKARIVAMSTV+EF
Sbjct: 301 YLKARIVAMSTVDEF 314

[Close]

BLAST of CsaV3_4G004220 vs. TrEMBL
Match: tr|A0A1S3BWR3|A0A1S3BWR3_CUCME (ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494460 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.1e-106
Identity = 208/314 (66.24%), Postives = 222/314 (70.70%), Query Frame = 0


Query: 1   MDDNMSYDDTTKIDERQHEITIKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDG 60
           MDDNMSYD++ K DERQHEITIKSRRVDPPSHYAFQIDSYSVLS+IEMKKCESGDFEVDG
Sbjct: 1   MDDNMSYDESIK-DERQHEITIKSRRVDPPSHYAFQIDSYSVLSEIEMKKCESGDFEVDG 60

Query: 61  YKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDG 120
           Y                                                           
Sbjct: 61  Y----------------------------------------------------------- 120

Query: 121 KMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEP 180
                                   KAS+GFLV+N CTFGVEVSILKASNKGERLTI +EP
Sbjct: 121 ----------------------MCKASNGFLVNNSCTFGVEVSILKASNKGERLTIFREP 180

Query: 181 QQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTSHISLYLKLDSSET 240
           QQDTYFWTLYSFSA     YISEPFNVKGRKWRME+YP+GNSLGKTSHISLYLKLD+SET
Sbjct: 181 QQDTYFWTLYSFSAKTNQSYISEPFNVKGRKWRMEIYPNGNSLGKTSHISLYLKLDNSET 232

Query: 241 IPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQNDAFY 300
           IPLGKKIYAKF+LGVYNFSAKKYIDKSYEHW+KTPGHG+GFDEFLSR+EISTHSQNDAFY
Sbjct: 241 IPLGKKIYAKFLLGVYNFSAKKYIDKSYEHWFKTPGHGDGFDEFLSRREISTHSQNDAFY 232

Query: 301 LKARIVAMSTVEEF 315
           LKARIVAMSTV+EF
Sbjct: 301 LKARIVAMSTVDEF 232

[Close]

BLAST of CsaV3_4G004220 vs. TrEMBL
Match: tr|A0A2I4FCU6|A0A2I4FCU6_9ROSI (probable inactive serine/threonine-protein kinase fnkC isoform X4 OS=Juglans regia OX=51240 GN=LOC108997577 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.3e-61
Identity = 122/302 (40.40%), Postives = 188/302 (62.25%), Query Frame = 0


Query: 22  IKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDGYKWKLILYPNGNEEVEDHISL 81
           ++S R  PP+HY FQI ++SVL + E+K CESG FEV GY WKL+L  NG +  + HISL
Sbjct: 20  VRSSRDLPPAHYTFQIKNFSVLFEAEVKNCESGVFEVGGYNWKLVLKTNGKKNSKSHISL 79

Query: 82  FLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQDGKMRKYSKMKSEHGFTHLISHN 141
           +LA+  N N L LGWE  V FRFF+FDQIR+ YL IQDG++R++  +K+E GF  L+SH+
Sbjct: 80  YLAIE-NQNTLSLGWEANVNFRFFVFDQIRNKYLCIQDGRVRRFHNLKTEWGFAQLLSHD 139

Query: 142 VFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEPQQDTYFWTLYSFSALKQPFYI 201
             N  S+G++V + C  G EV ++K S +G  L+++K+PQ + + W + +F   K  +Y+
Sbjct: 140 TLNDPSNGYIVDDSCILGAEVFVIKGSGRGVCLSMIKQPQTNYFTWRVDNFVVRKNDYYL 199

Query: 202 SEPFNVKGRKWRME-VYPHGNSLGKTSH---ISLYLKL-DSSETIPLGKKIYAKFILGVY 261
           S+ F V+G KW++  VYP GN    + H   +S YL + D  E I   +K+YAKF L + 
Sbjct: 200 SDVFIVEGLKWKLGLVYPRGNKATSSDHGFSLSFYLLMADDLEIITPNRKLYAKFKLRIR 259

Query: 262 NFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQ----NDAFYLKARIVAMSTVE 315
           +     +++++ EHW+     G G   F   +++   S     +DA  ++ +I  +S V+
Sbjct: 260 DQVNSNHLERTIEHWFSKSNVGFGAPTFSLLRDLKDPSNGYLVDDALLVECKIDVISEVK 319

[Close]

BLAST of CsaV3_4G004220 vs. TrEMBL
Match: tr|A0A2I4FCV2|A0A2I4FCV2_9ROSI (probable inactive serine/threonine-protein kinase fnkC isoform X3 OS=Juglans regia OX=51240 GN=LOC108997577 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.1e-61
Identity = 118/302 (39.07%), Postives = 191/302 (63.25%), Query Frame = 0


Query: 22  IKSRRVDPPSHYAFQIDSYSVLSQIEMKKCESGDFEVDGYKWKLILYPNGNEEVEDHISL 81
           ++S R  PP+HY FQI ++SVL + E+K CESG FEV GY WKL+L  NG +  + HISL
Sbjct: 20  VRSSRDLPPAHYTFQIKNFSVLFEAEVKNCESGVFEVGGYNWKLVLKTNGKKNSKSHISL 79

Query: 82  FLAVSTNDNNLPLGWELRVIFRFFIFDQIRDNYLTIQ--DGKMRKYSKMKSEHGFTHLIS 141
           +LA+  N N L LGWE  V FRFF+FDQIR+ YL IQ  DG++R++  +K+E GF  L+S
Sbjct: 80  YLAIE-NQNTLSLGWEANVNFRFFVFDQIRNKYLCIQDADGRVRRFHNLKTEWGFAQLLS 139

Query: 142 HNVFNKASSGFLVSNCCTFGVEVSILKASNKGERLTILKEPQQDTYFWTLYSFSALKQPF 201
           H+  N  S+G++V + C  G EV ++K S +   L+++K+PQ + + W + +F A K  +
Sbjct: 140 HDTLNDPSNGYIVDDSCILGAEVFVIKGSGREVCLSMIKQPQTNYFTWRVDNFDARKNDY 199

Query: 202 YISEPFNVKGRKWRMEVYPHGNSLGKTS---HISLYLKLDSSETIPLGKKIYAKFILGVY 261
           Y S+ F V+GRKW++++YP G+ +  +     +SL+L  D SE +   +K+YAK+ L + 
Sbjct: 200 YFSDVFIVEGRKWKLKLYPRGSDMATSDLGFCLSLFLGPDDSEIVTPNRKLYAKYKLRIR 259

Query: 262 NFSAKKYIDKSYEHWYKTPGHGNGFDEFLSRKEISTHSQ----NDAFYLKARIVAMSTVE 315
           +     +++++ E+W+ +   G G   F   +++   S     +DA  ++ +I  +S V+
Sbjct: 260 DQVNSNHLERTIEYWFSSSNIGFGSPTFTFLRDLKDPSNGYLVDDALLVECKIDVISVVK 319

The following BLAST results are available for this feature:

BLAST of CsaV3_4G004220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653084.1	8.0e-183	100.00	PREDICTED: probable inactive serine/threonine-protein kinase fnkC [Cucumis sativ...	[more]
XP_008453868.1	2.6e-165	90.79	PREDICTED: uncharacterized protein LOC103494460 isoform X1 [Cucumis melo]	[more]
XP_023529004.1	7.6e-125	69.84	speckle-type POZ protein-like A [Cucurbita pepo subsp. pepo]	[more]
XP_022989347.1	5.4e-123	69.21	uncharacterized protein LOC111486429 [Cucurbita maxima]	[more]
XP_022941740.1	2.7e-122	68.25	speckle-type POZ protein-like A [Cucurbita moschata]	[more]

BLAST of CsaV3_4G004220 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17380.1	1.7e-49	35.69	TRAF-like family protein	[more]
AT3G20370.1	4.3e-37	28.97	TRAF-like family protein	[more]
AT5G26280.1	4.3e-37	30.58	TRAF-like family protein	[more]
AT5G26260.1	4.3e-37	29.39	TRAF-like family protein	[more]
AT4G09770.1	1.4e-35	29.93	TRAF-like family protein	[more]

BLAST of CsaV3_4G004220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M2J1\|MCC19_ARATH	2.9e-11	30.89	MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis t...	[more]
sp\|Q9M2I9\|MCC21_ARATH	4.2e-10	32.28	MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis t...	[more]
sp\|Q9FPT1\|UBP12_ARATH	8.0e-09	27.82	Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]
sp\|Q84WU2\|UBP13_ARATH	8.0e-09	26.43	Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]
sp\|F4J4A1\|MCC14_ARATH	6.8e-08	30.22	MATH domain and coiled-coil domain-containing protein At3g44800 OS=Arabidopsis t...	[more]

BLAST of CsaV3_4G004220 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KUE1\|A0A0A0KUE1_CUCSA	5.3e-183	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G023030 PE=4 SV=1	[more]
tr\|A0A1S3BYG6\|A0A1S3BYG6_CUCME	1.7e-165	90.79	uncharacterized protein LOC103494460 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BWR3\|A0A1S3BWR3_CUCME	3.1e-106	66.24	ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 OS=Cucumis melo OX=3656...	[more]
tr\|A0A2I4FCU6\|A0A2I4FCU6_9ROSI	2.3e-61	40.40	probable inactive serine/threonine-protein kinase fnkC isoform X4 OS=Juglans reg...	[more]
tr\|A0A2I4FCV2\|A0A2I4FCV2_9ROSI	5.1e-61	39.07	probable inactive serine/threonine-protein kinase fnkC isoform X3 OS=Juglans reg...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR008974	TRAF-like
IPR002083	MATH/TRAF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G004220.1	CsaV3_4G004220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002083	MATH/TRAF domain	SMART	SM00061	math_3	coord: 35..143 e-value: 1.6E-5 score: 34.3 coord: 187..290 e-value: 2.6E-6 score: 37.0
IPR002083	MATH/TRAF domain	PFAM	PF00917	MATH	coord: 191..305 e-value: 7.4E-12 score: 45.3 coord: 44..164 e-value: 2.3E-7 score: 30.8
IPR002083	MATH/TRAF domain	PROSITE	PS50144	MATH	coord: 30..162 score: 25.53
IPR002083	MATH/TRAF domain	PROSITE	PS50144	MATH	coord: 182..305 score: 23.383
IPR002083	MATH/TRAF domain	CDD	cd00121	MATH	coord: 32..162 e-value: 4.67948E-20 score: 82.8122
IPR002083	MATH/TRAF domain	CDD	cd00121	MATH	coord: 184..305 e-value: 7.80542E-19 score: 79.3454
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 172..311 e-value: 2.0E-24 score: 88.1 coord: 14..171 e-value: 8.5E-33 score: 115.3
IPR008974	TRAF-like	SUPERFAMILY	SSF49599	TRAF domain-like	coord: 30..167
IPR008974	TRAF-like	SUPERFAMILY	SSF49599	TRAF domain-like	coord: 181..310
None	No IPR available	PANTHER	PTHR26379	FAMILY NOT NAMED	coord: 17..311
None	No IPR available	PANTHER	PTHR26379:SF213	F16G16.5-RELATED	coord: 17..311

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G004220	CSPI04G04160	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G004220	Cucsa.094090	Cucumber (Gy14) v1	cgycucB102
CsaV3_4G004220	CmaCh04G003620	Cucurbita maxima (Rimu)	cmacucB0842
CsaV3_4G004220	CmoCh04G003800	Cucurbita moschata (Rifu)	cmocucB0828
CsaV3_4G004220	Cp4.1LG01g03460	Cucurbita pepo (Zucchini)	cpecucB0498
CsaV3_4G004220	CsGy4G004070	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G004220	Carg08036	Silver-seed gourd	carcucB0405
CsaV3_4G004220	Cla010711	Watermelon (97103) v1	cucwmB324
CsaV3_4G004220	MELO3C017644	Melon (DHL92) v3.5.1	cucmeB315
CsaV3_4G004220	ClCG07G017000	Watermelon (Charleston Gray)	cucwcgB336
CsaV3_4G004220	Lsi07G001180	Bottle gourd (USVL1VR-Ls)	cuclsiB322
CsaV3_4G004220	MELO3C017644.2	Melon (DHL92) v3.6.1	cucmedB307
CsaV3_4G004220	Cla97C07G144050	Watermelon (97103) v2	cucwmbB324
CsaV3_4G004220	Bhi01G002004	Wax gourd	cucwgoB381

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G004220	Silver-seed gourd	carcucB0749
CsaV3_4G004220	Silver-seed gourd	carcucB0910
CsaV3_4G004220	Cucumber (Gy14) v2	cgybcucB228
CsaV3_4G004220	Cucurbita maxima (Rimu)	cmacucB0387
CsaV3_4G004220	Cucurbita moschata (Rifu)	cmocucB0384
CsaV3_4G004220	Cucurbita moschata (Rifu)	cmocucB0714
CsaV3_4G004220	Cucurbita pepo (Zucchini)	cpecucB0262
CsaV3_4G004220	Wild cucumber (PI 183967)	cpicucB280
CsaV3_4G004220	Bottle gourd (USVL1VR-Ls)	cuclsiB266
CsaV3_4G004220	Watermelon (Charleston Gray)	cucwcgB297
CsaV3_4G004220	Watermelon (97103) v1	cucwmB347
CsaV3_4G004220	Watermelon (97103) v2	cucwmbB269
CsaV3_4G004220	Cucumber (Chinese Long) v3	cuccucB173