Cp4.1LG01g03460 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g03460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ubiquitin carboxyl-terminal hydrolase 12
Location	Cp4.1LG01 : 1829824 .. 1831665 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAGAAATTACAAGAACAAGAAGGGTTGAGCCACCAGCTAATTATACATTCCAAATTAATTCATACTCAACACTTTCAGAAATAGGGATGAAGAAATGTGAATCTGGAAACTTTGCAGTTGATGGCTACAACTGGTTTGAAATGCTTAGATTTGAATTTAAACTTGATTAATATCATAAACTATGATTAGGGTTTTAATTAATCTCTCTATATCTTACATGGGTTGGCTTAGGAAATTGATTTTGTATCCAAATGGAGACGACGAAGTTGAAGATCATATCTCTCTCTACTTGGCTATAATTTCTAAGGATAATCTTCCTCTTGGCTGGGAAGTGAAGGTTATTTTCAGGTTCTTTGTATACGATCGAATCAAAGACAACTATCTAACCGTCCAAGGTATCGATATATCTGTTAGGAATCTCCACAATGGTATGATATTGTTCACTTTGAGTATAAGCTCTCGTGGGTGTGCTTTGAACTTTCCTAAAAGGCCTCGTCCAATAGAGATGTATTCTCATTCCCTAAATTAGTCAATGTGGGACTCTCTCCCAAAATTTTCTCCCCTCGAACAACAAAGTACACTATAGAGCCTCCTCTGAGGCCTATGGAGCCCTCAAACAGTCTCCCTTTAATCGAGGCTCGACATTTGAGGATTCTATTGACATAGCTACGTTAAGGATATAGTCATGGGTTTATAAGTAAGGAATACATCTCGTATGAGGTCTTTTGGGAAAGCCCAAAGTAAAACGATAAAAGCTTATGCTCGAAGTGGATAATATCATACTATTGTGGAGAGTCGTGATTCCTATATCTCATTCAAATTTTATTCATTAAACTACTCTAATAGTTATCGAACATGACTTTAGTTAACATGATCGAGACTTACAAAACGAATATCGATAATGATTTTGCAGATGGGAAAATGAGGAAGTATTCTAAAATGAAAAGTGAACATGGGTTCACCAAATTTCTTGCTCATAATGCTTTCAATCAAGCCTCCAATGGCTTCCTTGTGGATAATGGCTGCACATTTGGAGTTGAAGTTTCTGTACTTAAAGCCTCAAACAAAGGAGAAAGTTTAACCATTTTTAAAGAGCCTCAACTTGGATCCTTTTTTTGGTCCATTTCTTCATTTTCAAACAAAACTAATGAATTCTATCTCTCCGAACCCTTCACCGTCAAAGGAAGAAAATGGTACGTAACGTTCAAAAAAATAACAAAATCGTTATCAAACGAGACTTACGAAAGACTCATTTTTCGTTTGACTCATTGCTTCAGGCGATTGATGATATACCCGAACGGTCTTTCGTCGGGAAAGACGTCACATATCTCTCTTTACTTGAAGTTGGACAGCTCGGAAACCGTTCCGACCGGGAAGAAAATCTATGCCAAATTCTTTCTAAGTGTTTATAACTTTGGAGCTAAAAAATATGTGGATCAATCAAGTAAGTTATTTTTCTTTGAGTTTTATTATGAAAATAAAGTATTTTGTGTTGGAATCTTATGTGAAGCATTGCATTATTTGCAGATGAGTATTGGTTTGATAACACAGCCTATGGTCATGGCTTTCATGAGTTCTTGTCTCGAAACGACCTTCAACCTCATCATTTGCAAAATGATGTTTTCTATCTCAAAGCTAGAATTGTTGCTATGTCGGTTGTCGAAGATTTTTAGGTCGAAATGACATCAACAACCCGTGTCGAGATGTTGTATTAACATATGATAATGTATATATAGTACATAACGTGATACATGTGCTCGTGTTTAAGAGTTGGCCAATGATGAACTTTCGACCAAAACAAATATTTATCTTGAAAAAGTATGTAGATCTCGTTAATTGA

mRNA sequence

TACAGAAATTACAAGAACAAGAAGGGTTGAGCCACCAGCTAATTATACATTCCAAATTAATTCATACTCAACACTTTCAGAAATAGGGATGAAGAAATGTGAATCTGGAAACTTTGCAGTTGATGGCTACAACTGGAAATTGATTTTGTATCCAAATGGAGACGACGAAGTTGAAGATCATATCTCTCTCTACTTGGCTATAATTTCTAAGGATAATCTTCCTCTTGGCTGGGAAGTGAAGTATTCTAAAATGAAAAGTGAACATGGGTTCACCAAATTTCTTGCTCATAATGCTTTCAATCAAGCCTCCAATGGCTTCCTTGTGGATAATGGCTGCACATTTGGAGTTGAAGTTTCTGTACTTAAAGCCTCAAACAAAGGAGAAAGTTTAACCATTTTTAAAGAGCCTCAACTTGGATCCTTTTTTTGGTCCATTTCTTCATTTTCAAACAAAACTAATGAATTCTATCTCTCCGAACCCTTCACCGTCAAAGGAAGAAAATGGCGATTGATGATATACCCGAACGGTCTTTCGTCGGGAAAGACGTCACATATCTCTCTTTACTTGAAGTTGGACAGCTCGGAAACCGTTCCGACCGGGAAGAAAATCTATGCCAAATTCTTTCTAAGTGTTTATAACTTTGGAGCTAAAAAATATGTGGATCAATCAAATGAGTATTGGTTTGATAACACAGCCTATGGTCATGGCTTTCATGAGTTCTTGTCTCGAAACGACCTTCAACCTCATCATTTGCAAAATGATGTTTTCTATCTCAAAGCTAGAATTGTTGCTATGTCGGTTGTCGAAGATTTTTAGGTCGAAATGACATCAACAACCCGTGTCGAGATGTTGTATTAACATATGATAATGTATATATAGTACATAACGTGATACATGTGCTCGTGTTTAAGAGTTGGCCAATGATGAACTTTCGACCAAAACAAATATTTATCTTGAAAAAGTATGTAGATCTCGTTAATTGA

Coding sequence (CDS)

ATGAAGAAATGTGAATCTGGAAACTTTGCAGTTGATGGCTACAACTGGAAATTGATTTTGTATCCAAATGGAGACGACGAAGTTGAAGATCATATCTCTCTCTACTTGGCTATAATTTCTAAGGATAATCTTCCTCTTGGCTGGGAAGTGAAGTATTCTAAAATGAAAAGTGAACATGGGTTCACCAAATTTCTTGCTCATAATGCTTTCAATCAAGCCTCCAATGGCTTCCTTGTGGATAATGGCTGCACATTTGGAGTTGAAGTTTCTGTACTTAAAGCCTCAAACAAAGGAGAAAGTTTAACCATTTTTAAAGAGCCTCAACTTGGATCCTTTTTTTGGTCCATTTCTTCATTTTCAAACAAAACTAATGAATTCTATCTCTCCGAACCCTTCACCGTCAAAGGAAGAAAATGGCGATTGATGATATACCCGAACGGTCTTTCGTCGGGAAAGACGTCACATATCTCTCTTTACTTGAAGTTGGACAGCTCGGAAACCGTTCCGACCGGGAAGAAAATCTATGCCAAATTCTTTCTAAGTGTTTATAACTTTGGAGCTAAAAAATATGTGGATCAATCAAATGAGTATTGGTTTGATAACACAGCCTATGGTCATGGCTTTCATGAGTTCTTGTCTCGAAACGACCTTCAACCTCATCATTTGCAAAATGATGTTTTCTATCTCAAAGCTAGAATTGTTGCTATGTCGGTTGTCGAAGATTTTTAG

Protein sequence

MKKCESGNFAVDGYNWKLILYPNGDDEVEDHISLYLAIISKDNLPLGWEVKYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLKASNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTSHISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGHGFHEFLSRNDLQPHHLQNDVFYLKARIVAMSVVEDF

Homology

[Close]

BLAST of Cp4.1LG01g03460 vs. Swiss-Prot
Match: MCC04_ARATH (MATH domain and coiled-coil domain-containing protein At2g05410 OS=Arabidopsis thaliana GN=At2g05410 PE=3 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 9.3e-10
Identity = 41/129 (31.78%), Postives = 68/129 (52.71%), Query Frame = 1


Query: 114 WSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTSHISLYLKLDSSETVPTGKK 173
           W I +FS+  +    S+ F V G KWR+M YP G++    S  SL+L +  +E++PTG +
Sbjct: 11  WVIKNFSSLQSAPIYSDIFVVGGCKWRIMAYPKGINKAHDS-FSLFLNVPDNESLPTGWR 70

Query: 174 IYAKFFLSVYNFGAKKYVDQS-NEYWFDNTAYGHGFHEFLSRNDLQPH--HLQNDVFYLK 233
            +AK   S+ N G++K   +   ++WF   A+  GF   ++  +L      L N    + 
Sbjct: 71  RHAKVSFSLVNQGSEKLSQRKVTQHWFVQKAFTWGFPVMITHTELNAKMGFLVNGELKVV 130

Query: 234 ARIVAMSVV 240
           A+I  + VV
Sbjct: 131 AKIEVLEVV 138

[Close]

BLAST of Cp4.1LG01g03460 vs. Swiss-Prot
Match: MCC23_ARATH (MATH domain and coiled-coil domain-containing protein At3g58340 OS=Arabidopsis thaliana GN=At3g58340 PE=3 SV=3)

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-09
Identity = 39/130 (30.00%), Postives = 67/130 (51.54%), Query Frame = 1


Query: 112 FFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTSHISLYLKLDSSETVPTG 171
           F W I +FS+  +E   S P  +   KWRL+ +P G    K  ++SLYL++   +++P+G
Sbjct: 9   FCWEIKNFSSLNSERCHSVPVVIGDCKWRLVAFPKGY---KADYLSLYLEVADFKSLPSG 68

Query: 172 KKIYAKFFLSVYN-FGAKKYVDQSNEYWFDNTAYGHGFHEFLSRNDLQPHHLQNDVFYLK 231
            + Y KF   + N    +  V Q  + WFD  A G GF   L   +L   + ++  F + 
Sbjct: 69  WRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTEL---NAKDGGFLVN 128

Query: 232 ARIVAMSVVE 241
            +++ ++ VE
Sbjct: 129 GQVMIVAEVE 132

[Close]

BLAST of Cp4.1LG01g03460 vs. Swiss-Prot
Match: MCC26_ARATH (MATH domain and coiled-coil domain-containing protein At3g58370 OS=Arabidopsis thaliana GN=At3g58370 PE=3 SV=3)

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-08
Identity = 37/131 (28.24%), Postives = 62/131 (47.33%), Query Frame = 1


Query: 112 FFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTSHISLYLKLDSSETVPTG 171
           F W I +FS    +   S+PF + G KW L+ YP G     +  +SLYL +D +  +P G
Sbjct: 10  FTWVIKNFSTLQYDKIYSDPFVIGGCKWHLLAYPKGNKFNNS--LSLYLVVDDARALPCG 69

Query: 172 KKIYAKFFLSVYNFGAKKYVDQ-SNEYWFDNTAYGHGFHEFLSRNDLQPHHLQNDVFYLK 231
            + YA+F L++ N    K   +   + WF+    G GF   +   +L   H +N  + + 
Sbjct: 70  WRRYAQFSLTIINQLTDKLSQRGEKQNWFNQRNLGSGFTSMIPLPNL---HAKNAGYLVN 129

Query: 232 ARIVAMSVVED 242
             +  +  + D
Sbjct: 130 GEVKIVVEIND 135

[Close]

BLAST of Cp4.1LG01g03460 vs. Swiss-Prot
Match: MCC19_ARATH (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana GN=At3g58250 PE=3 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 3.9e-08
Identity = 35/116 (30.17%), Postives = 51/116 (43.97%), Query Frame = 1


Query: 2   KKCESGNFAVDGYNWKLILYPNGDDEVEDHISLYLAIISKDNLPLGWE------------ 61
           +K  S  F +DG  W+L+ +P G+D   DH+SLYL +   ++LP GW             
Sbjct: 24  EKIYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLYLDVAESESLPCGWRRHAQFSFTIVNH 83

Query: 62  --VKYSKMK----------SEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLK 94
              K S+ K          S+ GFT  +         +GFLV       VE+ VL+
Sbjct: 84  IPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELKAEDSGFLVKGELKIVVEIEVLE 139

[Close]

BLAST of Cp4.1LG01g03460 vs. Swiss-Prot
Match: MCC16_ARATH (MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana GN=At3g58210 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.7e-08
Identity = 37/133 (27.82%), Postives = 64/133 (48.12%), Query Frame = 1


Query: 112 FFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTSHISLYLKLDSSETVPTG 171
           F W I +FS+  +    S  F + G KWRL++YP G +     H+SL+L++    ++P G
Sbjct: 9   FTWVIQNFSSSQSRVVPSNQFVIGGCKWRLLVYPEGFNK-SGDHLSLFLEVADPRSLPPG 68

Query: 172 KKIYAKFFLSVYNFGAKKYVDQSNE--YWFDNTAYGHGFHEFLSRNDLQPH---HLQNDV 231
              +A++ L++ N  + K + + NE   WF+    G G    +    L       L ND 
Sbjct: 69  WSRHARYLLTIVNQHSDK-ISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVNDE 128

Query: 232 FYLKARIVAMSVV 240
             + A +  + V+
Sbjct: 129 LKIVAEVNVLEVI 139

[Close]

BLAST of Cp4.1LG01g03460 vs. TrEMBL
Match: A0A0A0KUE1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G023030 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.6e-85
Identity = 164/268 (61.19%), Postives = 194/268 (72.39%), Query Frame = 1


Query: 1   MKKCESGNFAVDGYNWKLILYPNGDDEVEDH---------------ISLYLAIISK---- 60
           MKKCESG+F VDGY WKLILYPNG++EVEDH               +   L +I +    
Sbjct: 48  MKKCESGDFEVDGYKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIF 107

Query: 61  ----DN---LPLGWEVKYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLKA 120
               DN   +  G   KYSKMKSEHGFT  ++HN FN+AS+GFLV N CTFGVEVS+LKA
Sbjct: 108 DQIRDNYLTIQDGKMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKA 167

Query: 121 SNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTS 180
           SNKGE LTI KEPQ  ++FW++ SFS     FY+SEPF VKGRKWR+ +YP+G S GKTS
Sbjct: 168 SNKGERLTILKEPQQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTS 227

Query: 181 HISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGHGFHEFLSR 240
           HISLYLKLDSSET+P GKKIYAKF L VYNF AKKY+D+S E+W+    +G+GF EFLSR
Sbjct: 228 HISLYLKLDSSETIPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSR 287

Query: 241 NDLQPHHLQNDVFYLKARIVAMSVVEDF 243
            ++  H  QND FYLKARIVAMS VE+F
Sbjct: 288 KEISTHS-QNDAFYLKARIVAMSTVEEF 314

[Close]

BLAST of Cp4.1LG01g03460 vs. TrEMBL
Match: F6H696_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g01130 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 9.6e-38
Identity = 98/273 (35.90%), Postives = 144/273 (52.75%), Query Frame = 1


Query: 1   MKKCESGNFAVDGYNWKLILYPNGDDEV--EDHISLYLAIISKDNLPLGWEV-------- 60
           ++K ESG+F V GY W+L LYPNG+ +   EDHISLYL I     LP+GWEV        
Sbjct: 50  IEKYESGSFKVGGYRWRLCLYPNGNKKSGGEDHISLYLEISDAQKLPVGWEVTVNFKLFV 109

Query: 61  -------------------KYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSV 120
                               ++ MKS  GF +FL+ +      NG+L+D+ C FG EV V
Sbjct: 110 FNHIHEKYLTVQDADGKVRDFNVMKSRCGFAQFLSLDVLKDPCNGYLMDDSCIFGAEVFV 169

Query: 121 LKASNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSG 180
           +K S KGE L++ K+P  G+F W I +FS    E   SE FT+K  KW+L +YP G    
Sbjct: 170 IKYSGKGECLSMIKDPDDGTFTWVIENFSTLNEEVLYSETFTIKEIKWKLSLYPKGNGKV 229

Query: 181 KTSHISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSN-----EYWFDNTAYGH 237
           K   + L+L+L   ET+   +K+Y +F L + +    + V+ S+     + WF ++    
Sbjct: 230 KNKSLCLFLELADCETLHHQRKLYMEFELLIKDQCNDENVEPSHVKSNAKVWFCDSNKEW 289

[Close]

BLAST of Cp4.1LG01g03460 vs. TrEMBL
Match: A9PEN0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s10220g PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.0e-36
Identity = 91/270 (33.70%), Postives = 144/270 (53.33%), Query Frame = 1


Query: 5   ESGNFAVDGYNWKLILYPNGD--DEVEDHISLYLAIISKDNLPLGWEVK-------YSKM 64
           ESG+F V  Y W+L LYPNG+  +  + HISLYLA  + + LP GWEV        Y+++
Sbjct: 51  ESGDFEVGSYKWRLRLYPNGNKKNNGDGHISLYLAFSNSNALPFGWEVNVNFRLFVYNQI 110

Query: 65  KSEH--------------------GFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLKAS 124
           + ++                    GF + +    FN  S G+L+D+ C FG E+ V+K +
Sbjct: 111 QDKYLTIQYAKGRVRRFHGMKTELGFDQLIPLTIFNDESKGYLIDDRCIFGAEIFVIKPT 170

Query: 125 NKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTSH 184
            KGE LT+  +P   +F W I +FS    E Y S+ F+  G KW L++YP G S+ K   
Sbjct: 171 GKGECLTLVNQPVSDTFTWKIQNFSALDQESYKSQVFSFGGYKWALLVYPKGNSTEKGKS 230

Query: 185 ISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGHGFHEFLSRN 243
           +S+YLK++  ET+P G+  YA++ L V +    K++++     F  +    G   F+S +
Sbjct: 231 LSIYLKMEDFETLPCGRTTYAEYMLRVKDQLFGKHIEKKAYSHFSYSIKDWGHLNFMSLD 290

[Close]

BLAST of Cp4.1LG01g03460 vs. TrEMBL
Match: A0A022Q9E6_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a019395mg PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-35
Identity = 87/237 (36.71%), Postives = 127/237 (53.59%), Query Frame = 1


Query: 6   SGNFAVDGYNWKLILYPNG--DDEVEDHISLYLAIISKDNLPLGWEVKYS---------- 65
           S +F   GY WKL+++PNG  +  + DHISLYL +   ++L  GWE++ S          
Sbjct: 34  SSDFEAGGYKWKLVVHPNGYKNKGITDHISLYLVLAESNSLNPGWEIRASFRLFLLDQNK 93

Query: 66  --------------KMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVL--KASNK 125
                          MK E GF KF+   AF   SNG+LV++ C FG EV V   K S K
Sbjct: 94  DNYITLKEHGRRFHGMKLEWGFNKFVPLAAFMDPSNGYLVNDNCVFGAEVYVCREKLSGK 153

Query: 126 GESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTSHIS 185
           GE L++ K+P      W I +FS+ T E   S+PF+   +KW++ +YP G  SG  SH+S
Sbjct: 154 GECLSMIKDPITYKSTWRIDNFSDITQETAYSKPFSSADKKWKIQLYPKGTGSGNESHVS 213

Query: 186 LYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGHGFHEFLSR 215
           LYL LD +E +P   KIYA+F L + +   + +   ++++WF       G+  F S+
Sbjct: 214 LYLTLDEAEKLPPTAKIYAEFTLRILDQLNRNHASGTSKHWFSALNPTSGWARFSSQ 270

[Close]

BLAST of Cp4.1LG01g03460 vs. TrEMBL
Match: F6H695_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g01140 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.4e-34
Identity = 99/276 (35.87%), Postives = 142/276 (51.45%), Query Frame = 1


Query: 1   MKKCESGNFAVDGYNWKLILYPNGD--DEVEDHISLYLAIISKDNLPLGWEV-------- 60
           ++K ESG+F V GY W L +YPNG+   + E HISLYL I    NLPLGWEV        
Sbjct: 52  IEKYESGSFEVGGYKWSLCIYPNGNKKSDGEGHISLYLEISEAQNLPLGWEVTVNFKLFV 111

Query: 61  -------------------KYSKMKSEHGFTKFLAHNAFNQASNGF---LVDNGCTFGVE 120
                               ++ MK+  GF +FL+ +            L+D+ C FG E
Sbjct: 112 FNHIHEKYLTVQDADGKVRHFNAMKTRCGFAQFLSLDVLKDPR---NGYLMDDSCIFGAE 171

Query: 121 VSVLKASNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGL 180
           V V+K S KGESL++ K+P  G+F W+I +FS    E   SE FTVK  KWRL++YP G 
Sbjct: 172 VFVIKYSGKGESLSMIKDPVDGTFTWTIENFSALNQEVLDSEIFTVKELKWRLVLYPKGN 231

Query: 181 SSGKTSHISLYLKLDSSETVPTGKKIYAKFFLSVYN-----FGAKKYVDQSNEYWFDNTA 237
           +  K   +SL+L+L + ET+   +K+Y  F L + +          +V  + + WF +T 
Sbjct: 232 NKAKNKSLSLFLELTNRETLHQ-RKLYTAFELLIKDQCNDEIVMPSHVKSNAKVWFRDTI 291

[Close]

BLAST of Cp4.1LG01g03460 vs. TAIR10
Match: AT3G17380.1 (AT3G17380.1 TRAF-like family protein)

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35
Identity = 76/241 (31.54%), Postives = 125/241 (51.87%), Query Frame = 1


Query: 1   MKKCESGNFAVDGYNWKLILYPNGDDE--VEDHISLYLAIISKDNLPLGWEV-------- 60
           +++ E+ +F   GY WKL+LYPNG+     +DH+S+YL++    +L  GWEV        
Sbjct: 37  IERYETESFEAGGYKWKLVLYPNGNKSKNTKDHVSVYLSLADSSSLSPGWEVYAVFRLYL 96

Query: 61  ----------------KYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLKA 120
                           ++  +K E GF KF+    F+ ASNG+L+++ C FG +V V K 
Sbjct: 97  LDQNKDNYLILQGNERRFHSVKREWGFDKFIPTGTFSDASNGYLMEDTCMFGADVFVSKE 156

Query: 121 --SNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGK 180
             S +GE L++ K+       W I +FS    E Y S  F    RKW++  YP G   G 
Sbjct: 157 RRSGRGECLSMIKDATSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGTKQGT 216

Query: 181 TSHISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGHGFHEFL 214
            +H+S+YL L   ET+  G KI+ +F + +++    +++      WF  ++  HG+ +++
Sbjct: 217 GTHLSIYLTLVDPETISDGTKIFVEFTIRIFDQLQGRHIAGKVTKWFSRSSSEHGWVKYV 276

[Close]

BLAST of Cp4.1LG01g03460 vs. TAIR10
Match: AT3G20370.1 (AT3G20370.1 TRAF-like family protein)

HSP 1 Score: 118.2 bits (295), Expect = 6.8e-27
Identity = 81/276 (29.35%), Postives = 131/276 (47.46%), Query Frame = 1


Query: 2   KKCESGNFAVDGYNWKLILYPNGD--DEVEDHISLYLAIISKDNLPLGWEV--------- 61
           +K  S  F+V GYNW L+++PNG+  D    ++SLY+AI   DN  LG +          
Sbjct: 105 EKYVSRPFSVGGYNWTLVVFPNGNKKDSGSGYLSLYVAI---DNSTLGQQEIYADLRFYI 164

Query: 62  -----------------KYSKMKSEHGFTKFLAHNAFNQASNGFLVDNG-CTFGVEVSVL 121
                            K+S  K+  GF++ L  + F   + G+L D   C FGV+V++ 
Sbjct: 165 FNKNERKYFTIQDTDVWKFSVFKTMWGFSQVLPIDTFKDPTKGYLYDGDHCEFGVDVTMP 224

Query: 122 KASNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGK 181
               K E  ++ +      F W+I  FS      YLSE F++ GR W + I P+GL +G+
Sbjct: 225 SLYEKSELFSVTENFLNPRFTWTIRGFSTLLKNSYLSEVFSIGGRSWNIQINPSGLGTGE 284

Query: 182 TSHISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGH---GFH 241
              +S+YL L+ +E     +KIY +  L   N      +++  + W++   YG    GF 
Sbjct: 285 GKALSMYLGLNVNEIFRPYEKIYVRAKLRALNQLNLSNIERELDIWYNGPGYGEYSWGFP 344

Query: 242 EFL---SRNDLQPHHLQNDVFYLKARIVAMSVVEDF 243
           EF+      D     ++NDV  ++  + A+S  + F
Sbjct: 345 EFIYFPYLTDSSKGFVKNDVLMVQVEMEAISSTKYF 377

[Close]

BLAST of Cp4.1LG01g03460 vs. TAIR10
Match: AT5G26280.1 (AT5G26280.1 TRAF-like family protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 74/265 (27.92%), Postives = 117/265 (44.15%), Query Frame = 1


Query: 5   ESGNFAVDGYNWKLILYPNGD--DEVEDHISLYLAIISKDNLPLGWEV------------ 64
           ES  F   GY W+L+LY NG+  D   DHISLY  I   ++LPLGWEV            
Sbjct: 80  ESSVFEAAGYKWRLVLYVNGNKNDGGNDHISLYARIEETNSLPLGWEVNVDLKLFVHNGK 139

Query: 65  -------------KYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLKASNK 124
                        +Y+  K E GF + +  + F  A+ G+L  +  +FG E+ ++K + +
Sbjct: 140 LHKYLTVTDGLVKRYNNAKKEWGFGQLIPRSTFYNANEGYLDQDTGSFGAEIFIVKPAQQ 199

Query: 125 GESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTSHIS 184
            E +T    P    F W I  FS   ++FY S+ F V+ R WRL   P G   G+   + 
Sbjct: 200 QEKVTFISNPPNNVFTWKILRFSTLEDKFYYSDDFLVEDRYWRLGFNPKGDGGGRPHALP 259

Query: 185 LYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFD-NTAYGHGFHEFL---S 239
           ++L     +        +    L + N  +  +    +  W+   + YG G +  +    
Sbjct: 260 IFLFAQGHKANAVATNTWGAVNLRLKNQRSTNHRQIYSAAWYPIGSGYGVGVNNIILLAD 319

[Close]

BLAST of Cp4.1LG01g03460 vs. TAIR10
Match: AT5G26260.1 (AT5G26260.1 TRAF-like family protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.9e-25
Identity = 71/265 (26.79%), Postives = 117/265 (44.15%), Query Frame = 1


Query: 5   ESGNFAVDGYNWKLILYPNGDDE--VEDHISLYLAIISKDNLPLGWEV------------ 64
           ES  F   GY W+L+LY  G+ +  + +HISLY  I   + LP GWEV            
Sbjct: 81  ESSIFEAAGYKWRLVLYVKGNPKGGINNHISLYARIEETETLPRGWEVNVDLKLFVHNRK 140

Query: 65  -------------KYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLKASNK 124
                        +Y+  K E GFT+ ++   F  A+ G+LV +  +FG E+ ++  + K
Sbjct: 141 LKKYLSVTDGTVKRYNDAKKEWGFTQLISLPTFYNANEGYLVQDTASFGAEIFIVNPTEK 200

Query: 125 GESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTSHIS 184
            E +T    P    F W I  FS   ++FY S+ F V  R WRL   P G   G+   + 
Sbjct: 201 QEKVTFISNPPDNVFTWKILRFSTLEDKFYYSDDFLVGDRYWRLGFNPKGSGGGRPHALP 260

Query: 185 LYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFD-NTAYGHGFHEFLSRND 239
           ++L     +        +    L + N  +  +    +  W+   + YG G +  +  ++
Sbjct: 261 IFLYAQGHKANAVVTNTWGAVNLRLKNQRSSNHKQLYSAAWYPIRSDYGVGVNNIILMSE 320

[Close]

BLAST of Cp4.1LG01g03460 vs. TAIR10
Match: AT3G22080.1 (AT3G22080.1 TRAF-like family protein)

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-24
Identity = 75/267 (28.09%), Postives = 122/267 (45.69%), Query Frame = 1


Query: 3   KCESGNFAVDGYNWKLILYPNGD--DEVEDHISLYLAIISKDNLPLGW------------ 62
           K +S  F+  GYNW++I+YP G+  D+    IS+Y+ I S   L                
Sbjct: 376 KYQSRLFSSGGYNWRMIIYPKGNRKDDGSGFISMYVEIDSTSLLTTPTTEVFADLRFFVF 435

Query: 63  ---EVKY-------SKM----KSEHGFTKFLAHNAFNQASNGFLVDNG-CTFGVEVSVLK 122
              E KY       SK+    ++  G  + L  + F    NG++ +   C FGV+V V  
Sbjct: 436 NKKENKYYTIQHVESKLFNAFRTIWGLAQVLPVDTFTDPKNGYIFEGDQCEFGVDVIVAA 495

Query: 123 ASNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKT 182
                E  T+ +      FFW++ +FS   N  Y S  F+++ RKW L +YP G   G  
Sbjct: 496 PPTNWEIHTLHEALSQPKFFWTVKNFSELNNNVYTSGNFSMRERKWVLKLYPKGDVKGDR 555

Query: 183 SHISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGHGFHEFLS 241
             +SLYL LD SET+   +KI+ +  L V +     +V      W+ ++    G+ +F+S
Sbjct: 556 KWLSLYLYLDQSETLKESEKIFVQAQLRVLDPRGSNHVTHKISSWYTSSNTAWGYRKFVS 615

[Close]

BLAST of Cp4.1LG01g03460 vs. NCBI nr
Match: gi|659107806|ref|XP_008453868.1| (PREDICTED: uncharacterized protein LOC103494460 isoform X1 [Cucumis melo])

HSP 1 Score: 328.6 bits (841), Expect = 9.4e-87
Identity = 165/269 (61.34%), Postives = 195/269 (72.49%), Query Frame = 1


Query: 1   MKKCESGNFAVDGYNWKLILYPNGDDEVEDH------------------------ISLYL 60
           MKKCESG+F VDGY WKLILYPNG+ EVEDH                           ++
Sbjct: 47  MKKCESGDFEVDGYMWKLILYPNGNGEVEDHISLFLAISTNDNNNLPLGWEVRVIFRFFI 106

Query: 61  AIISKDN---LPLGWEVKYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLK 120
               +DN   +  G   KYSKMKSEHGFT  ++HN F++ASNGFLV+N CTFGVEVS+LK
Sbjct: 107 FDQIRDNYLTIQDGKMRKYSKMKSEHGFTHLISHNVFSKASNGFLVNNSCTFGVEVSILK 166

Query: 121 ASNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKT 180
           ASNKGE LTIF+EPQ  ++FW++ SFS KTN+ Y+SEPF VKGRKWR+ IYPNG S GKT
Sbjct: 167 ASNKGERLTIFREPQQDTYFWTLYSFSAKTNQSYISEPFNVKGRKWRMEIYPNGNSLGKT 226

Query: 181 SHISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGHGFHEFLS 240
           SHISLYLKLD+SET+P GKKIYAKF L VYNF AKKY+D+S E+WF    +G GF EFLS
Sbjct: 227 SHISLYLKLDNSETIPLGKKIYAKFLLGVYNFSAKKYIDKSYEHWFKTPGHGDGFDEFLS 286

Query: 241 RNDLQPHHLQNDVFYLKARIVAMSVVEDF 243
           R ++  H  QND FYLKARIVAMS V++F
Sbjct: 287 RREISTHS-QNDAFYLKARIVAMSTVDEF 314

[Close]

BLAST of Cp4.1LG01g03460 vs. NCBI nr
Match: gi|778690254|ref|XP_011653084.1| (PREDICTED: probable inactive serine/threonine-protein kinase fnkC [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 5.2e-85
Identity = 164/268 (61.19%), Postives = 194/268 (72.39%), Query Frame = 1


Query: 1   MKKCESGNFAVDGYNWKLILYPNGDDEVEDH---------------ISLYLAIISK---- 60
           MKKCESG+F VDGY WKLILYPNG++EVEDH               +   L +I +    
Sbjct: 48  MKKCESGDFEVDGYKWKLILYPNGNEEVEDHISLFLAVSTNDNNLPLGWELRVIFRFFIF 107

Query: 61  ----DN---LPLGWEVKYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSVLKA 120
               DN   +  G   KYSKMKSEHGFT  ++HN FN+AS+GFLV N CTFGVEVS+LKA
Sbjct: 108 DQIRDNYLTIQDGKMRKYSKMKSEHGFTHLISHNVFNKASSGFLVSNCCTFGVEVSILKA 167

Query: 121 SNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSGKTS 180
           SNKGE LTI KEPQ  ++FW++ SFS     FY+SEPF VKGRKWR+ +YP+G S GKTS
Sbjct: 168 SNKGERLTILKEPQQDTYFWTLYSFSALKQPFYISEPFNVKGRKWRMEVYPHGNSLGKTS 227

Query: 181 HISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSNEYWFDNTAYGHGFHEFLSR 240
           HISLYLKLDSSET+P GKKIYAKF L VYNF AKKY+D+S E+W+    +G+GF EFLSR
Sbjct: 228 HISLYLKLDSSETIPLGKKIYAKFILGVYNFSAKKYIDKSYEHWYKTPGHGNGFDEFLSR 287

Query: 241 NDLQPHHLQNDVFYLKARIVAMSVVEDF 243
            ++  H  QND FYLKARIVAMS VE+F
Sbjct: 288 KEISTHS-QNDAFYLKARIVAMSTVEEF 314

[Close]

BLAST of Cp4.1LG01g03460 vs. NCBI nr
Match: gi|659107808|ref|XP_008453869.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 3.9e-64
Identity = 121/171 (70.76%), Postives = 142/171 (83.04%), Query Frame = 1


Query: 72  QASNGFLVDNGCTFGVEVSVLKASNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEP 131
           +ASNGFLV+N CTFGVEVS+LKASNKGE LTIF+EPQ  ++FW++ SFS KTN+ Y+SEP
Sbjct: 63  KASNGFLVNNSCTFGVEVSILKASNKGERLTIFREPQQDTYFWTLYSFSAKTNQSYISEP 122

Query: 132 FTVKGRKWRLMIYPNGLSSGKTSHISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYV 191
           F VKGRKWR+ IYPNG S GKTSHISLYLKLD+SET+P GKKIYAKF L VYNF AKKY+
Sbjct: 123 FNVKGRKWRMEIYPNGNSLGKTSHISLYLKLDNSETIPLGKKIYAKFLLGVYNFSAKKYI 182

Query: 192 DQSNEYWFDNTAYGHGFHEFLSRNDLQPHHLQNDVFYLKARIVAMSVVEDF 243
           D+S E+WF    +G GF EFLSR ++  H  QND FYLKARIVAMS V++F
Sbjct: 183 DKSYEHWFKTPGHGDGFDEFLSRREISTHS-QNDAFYLKARIVAMSTVDEF 232

[Close]

BLAST of Cp4.1LG01g03460 vs. NCBI nr
Match: gi|296083026|emb|CBI22430.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-37
Identity = 98/273 (35.90%), Postives = 144/273 (52.75%), Query Frame = 1


Query: 1   MKKCESGNFAVDGYNWKLILYPNGDDEV--EDHISLYLAIISKDNLPLGWEV-------- 60
           ++K ESG+F V GY W+L LYPNG+ +   EDHISLYL I     LP+GWEV        
Sbjct: 394 IEKYESGSFKVGGYRWRLCLYPNGNKKSGGEDHISLYLEISDAQKLPVGWEVTVNFKLFV 453

Query: 61  -------------------KYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSV 120
                               ++ MKS  GF +FL+ +      NG+L+D+ C FG EV V
Sbjct: 454 FNHIHEKYLTVQDADGKVRDFNVMKSRCGFAQFLSLDVLKDPCNGYLMDDSCIFGAEVFV 513

Query: 121 LKASNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSG 180
           +K S KGE L++ K+P  G+F W I +FS    E   SE FT+K  KW+L +YP G    
Sbjct: 514 IKYSGKGECLSMIKDPDDGTFTWVIENFSTLNEEVLYSETFTIKEIKWKLSLYPKGNGKV 573

Query: 181 KTSHISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSN-----EYWFDNTAYGH 237
           K   + L+L+L   ET+   +K+Y +F L + +    + V+ S+     + WF ++    
Sbjct: 574 KNKSLCLFLELADCETLHHQRKLYMEFELLIKDQCNDENVEPSHVKSNAKVWFCDSNKEW 633

[Close]

BLAST of Cp4.1LG01g03460 vs. NCBI nr
Match: gi|731384008|ref|XP_002265318.2| (PREDICTED: uncharacterized protein LOC100259955 [Vitis vinifera])

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-37
Identity = 98/273 (35.90%), Postives = 144/273 (52.75%), Query Frame = 1


Query: 1   MKKCESGNFAVDGYNWKLILYPNGDDEV--EDHISLYLAIISKDNLPLGWEV-------- 60
           ++K ESG+F V GY W+L LYPNG+ +   EDHISLYL I     LP+GWEV        
Sbjct: 549 IEKYESGSFKVGGYRWRLCLYPNGNKKSGGEDHISLYLEISDAQKLPVGWEVTVNFKLFV 608

Query: 61  -------------------KYSKMKSEHGFTKFLAHNAFNQASNGFLVDNGCTFGVEVSV 120
                               ++ MKS  GF +FL+ +      NG+L+D+ C FG EV V
Sbjct: 609 FNHIHEKYLTVQDADGKVRDFNVMKSRCGFAQFLSLDVLKDPCNGYLMDDSCIFGAEVFV 668

Query: 121 LKASNKGESLTIFKEPQLGSFFWSISSFSNKTNEFYLSEPFTVKGRKWRLMIYPNGLSSG 180
           +K S KGE L++ K+P  G+F W I +FS    E   SE FT+K  KW+L +YP G    
Sbjct: 669 IKYSGKGECLSMIKDPDDGTFTWVIENFSTLNEEVLYSETFTIKEIKWKLSLYPKGNGKV 728

Query: 181 KTSHISLYLKLDSSETVPTGKKIYAKFFLSVYNFGAKKYVDQSN-----EYWFDNTAYGH 237
           K   + L+L+L   ET+   +K+Y +F L + +    + V+ S+     + WF ++    
Sbjct: 729 KNKSLCLFLELADCETLHHQRKLYMEFELLIKDQCNDENVEPSHVKSNAKVWFCDSNKEW 788

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g03460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MCC04_ARATH	9.3e-10	31.78	MATH domain and coiled-coil domain-containing protein At2g05410 OS=Arabidopsis t...	[more]
MCC23_ARATH	2.1e-09	30.00	MATH domain and coiled-coil domain-containing protein At3g58340 OS=Arabidopsis t...	[more]
MCC26_ARATH	2.3e-08	28.24	MATH domain and coiled-coil domain-containing protein At3g58370 OS=Arabidopsis t...	[more]
MCC19_ARATH	3.9e-08	30.17	MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis t...	[more]
MCC16_ARATH	6.7e-08	27.82	MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis t...	[more]

BLAST of Cp4.1LG01g03460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUE1_CUCSA	3.6e-85	61.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G023030 PE=4 SV=1	[more]
F6H696_VITVI	9.6e-38	35.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g01130 PE=4 SV=...	[more]
A9PEN0_POPTR	4.0e-36	33.70	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s10220g PE=2 SV=1	[more]
A0A022Q9E6_ERYGU	2.6e-35	36.71	Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a019395mg...	[more]
F6H695_VITVI	8.4e-34	35.87	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g01140 PE=4 SV=...	[more]

BLAST of Cp4.1LG01g03460 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17380.1	1.1e-35	31.54	TRAF-like family protein	[more]
AT3G20370.1	6.8e-27	29.35	TRAF-like family protein	[more]
AT5G26280.1	1.2e-26	27.92	TRAF-like family protein	[more]
AT5G26260.1	2.9e-25	26.79	TRAF-like family protein	[more]
AT3G22080.1	2.4e-24	28.09	TRAF-like family protein	[more]

BLAST of Cp4.1LG01g03460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107806\|ref\|XP_008453868.1\|	9.4e-87	61.34	PREDICTED: uncharacterized protein LOC103494460 isoform X1 [Cucumis melo]	[more]
gi\|778690254\|ref\|XP_011653084.1\|	5.2e-85	61.19	PREDICTED: probable inactive serine/threonine-protein kinase fnkC [Cucumis sativ...	[more]
gi\|659107808\|ref\|XP_008453869.1\|	3.9e-64	70.76	PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 [Cucumis mel...	[more]
gi\|296083026\|emb\|CBI22430.3\|	1.4e-37	35.90	unnamed protein product [Vitis vinifera]	[more]
gi\|731384008\|ref\|XP_002265318.2\|	1.4e-37	35.90	PREDICTED: uncharacterized protein LOC100259955 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR008974	TRAF-like
IPR002083	MATH/TRAF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g03460.1	Cp4.1LG01g03460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002083	MATH/TRAF domain	PFAM	PF00917	MATH	coord: 9..52 score: 0.045coord: 116..233 score: 4.0
IPR002083	MATH/TRAF domain	SMART	SM00061	math_3	coord: 114..217 score: 2.0
IPR002083	MATH/TRAF domain	PROFILE	PS50144	MATH	coord: 109..233 score: 27.295coord: 1..89 score: 1
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 52..92 score: 3.7E-4coord: 3..51 score: 5.4E-8coord: 102..233 score: 7.0
IPR008974	TRAF-like	unknown	SSF49599	TRAF domain-like	coord: 2..94 score: 1.8E-18coord: 110..238 score: 2.29

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g03460	Cucsa.094090	Cucumber (Gy14) v1	cgycpeB0191
Cp4.1LG01g03460	CmaCh04G003620	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g03460	CmoCh04G003800	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g03460	Cla010711	Watermelon (97103) v1	cpewmB421
Cp4.1LG01g03460	Csa4G023030	Cucumber (Chinese Long) v2	cpecuB401
Cp4.1LG01g03460	MELO3C017644	Melon (DHL92) v3.5.1	cpemeB425
Cp4.1LG01g03460	ClCG07G017000	Watermelon (Charleston Gray)	cpewcgB403
Cp4.1LG01g03460	CSPI04G04160	Wild cucumber (PI 183967)	cpecpiB398
Cp4.1LG01g03460	Lsi07G001180	Bottle gourd (USVL1VR-Ls)	cpelsiB374
Cp4.1LG01g03460	MELO3C017644.2	Melon (DHL92) v3.6.1	cpemedB497
Cp4.1LG01g03460	CsaV3_4G004220	Cucumber (Chinese Long) v3	cpecucB0498
Cp4.1LG01g03460	Bhi01G002004	Wax gourd	cpewgoB0519
Cp4.1LG01g03460	CsGy4G004070	Cucumber (Gy14) v2	cgybcpeB503
Cp4.1LG01g03460	Carg08036	Silver-seed gourd	carcpeB0527

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g03460	Wax gourd	cpewgoB0477
Cp4.1LG01g03460	Cucurbita pepo (Zucchini)	cpecpeB234
Cp4.1LG01g03460	Cucurbita pepo (Zucchini)	cpecpeB403
Cp4.1LG01g03460	Cucurbita maxima (Rimu)	cmacpeB351
Cp4.1LG01g03460	Cucurbita moschata (Rifu)	cmocpeB311
Cp4.1LG01g03460	Bottle gourd (USVL1VR-Ls)	cpelsiB314
Cp4.1LG01g03460	Bottle gourd (USVL1VR-Ls)	cpelsiB340
Cp4.1LG01g03460	Watermelon (Charleston Gray)	cpewcgB372
Cp4.1LG01g03460	Silver-seed gourd	carcpeB1001
Cp4.1LG01g03460	Silver-seed gourd	carcpeB1216
Cp4.1LG01g03460	Cucumber (Chinese Long) v3	cpecucB0540