CsaV3_4G003160 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G003160
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Protein of unknown function (DUF1685)
Location	chr4 : 1952725 .. 1955624 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAATTGTATTTTGTATTTTGTATATATAACATTATAAGATGTGGATGTGGATGTGGATGTGATTATGCAAATACGTAAGAAAGAAAGGATGAAGGATGAAGGATGAACACCGAAACACCACCTGTTGGAGTGAGAGGGCCCCAGAGCCCACGTTGTCGTCCTCTTATTGATGGAATCTCCTGACCCCACATGGGAACCCCGTGTCCCCACCCCTCCATTCTTTGTCATCATCCAAGCTTCTAGGTACAGCTGTCCATTTCCACGTCATATTCTTATGAAATGGCATCATAATGTCTCATGTCCAAACATAACATACAGACATGCATGCATACATGCATACATCGAAATTAAATAAAAGAAAAAACAAAATTTAAAATAATTTTACTCTGCTTTATAAACCCAACCTCCTCTCTCCAACTCTGTTGCGGACACGTTTTAAAGACAGAGAGAAAAGAGAGAAGCGAGAATTCAAAAGCCAAGGAAAATGGGAAGTGATTTCTTTACCGAATCTCAAACGTGGGTTTCTTCTGTTAACGGAATTCGAGAAGACCCAGATGATGAAACTTCCATTGACGGAGGTGAGGGAATTGGGACGGATTCGGATTTCGATGAGTCGGCTCAAATGGGGGTGAAGAAGAGGATGATGAAGAAGAGGAGTCAGGTTTTGCTTGAAGGGTTTGTTGAGGATGAGGATGATTTGATGAGGACTAAGAGCTTGACGGATGAGGATCTTGATGAGCTTAAAGGCTGTGTAGATCTAGGCTTTGGTTTTAGCTATGATGAGATTCCGGAGCTCTGTAACACTCTCCCGGCTTTGGAGCTCTGTTATTCCATGAGCCAGAAGTACATGGACGATCACCAGAAGTCGCCGGAGAGTTCGCCGGCTTCGGCGGTTCCGGCCGACTCTTGCTCTTCTGTTTCCAGTCCGATTGCGAATTGGAAGATCTCCAGTCCTGGTGAGTGCCCGTTTTTCTCTGGGATCTTGATTTTGGAACTGGATTTGTTTGCACATCGTACATTTTTGTTTTATCTTGATTGTGTAGATCGTTTTTTTTGCCCTCTTTTCTTCTTAAGGAGTTTGAATTGAGAATGAGCTGATCTTGTTTCTTAGTTGACTGAACTTTTTGTCTCTCAACTTGTATGGATAATTGCTTGAAATCAACTGGGCGGTCTCTATATTTATCTTTAAGTTTGTGTTGATTATGGAAACTTAGGGACTAAAACAGATTTTCCTTTTAGAAAAGAAAGTTTCAAGGTTAAAACAGAGTAGTAATTTTGAAATTTCAGAGATCTAAGACTTAAACTTTCATTTTTCCCCTACTTCTCTTGAGAAAATGAGTCTGTTTTTTTTTTCCTCAATGAGAATGTGGTTTTTTCTACTTCTAGCTGGTTGGATGTTTGTTCTGTACTGGTGGGGTGAAGTCAAAAGTCCTGAATTTGTCTTCACTCTATCTTGTGCTTATCACTATGAATTCTTGCGGTCCCAATTTTACAAGCTGGTTATCTACCCTGTTTTACGTGTAATCTTATCTTGAATATATATAGAAAATAAATTGTTTTCCTTAAAAAAAAGCATTGAAAATAAATATTGATTCAACATGATTTATGACAGGGGATTTTACAATCTAGTCTTTTTTCTGTCATTTTTTGAACTACCTTGATAATTTTAGGACTCCACGGGTGTTAAGAAAATATTGACAAAAAAAGATTTAAGTGTACTTGGGGTAAGATAAGACATTCTTCTGAACTTTTGAAGCTGTTTTGCTGATACAGGTGATCATCCAGAAGATGTTAAAGCGAGGCTCAAATTTTGGGCTCAGGCAGTGGCATGTACTGTTAGACTATGCAACTAAGAAGACCATGGAATGGAAGTTTTGATTTGGGATGAGAAAATGAATGCATCTTTTTGCACTAGTAACCTAGCCTTATGGTTTGACGACGTTGCAAAGGTTCCAAGAAAAGATAGATTGAATGATTGAATGAACAAACGGGTCGTTTGATGAGTCTGACTTATGAAGAAGAAGAAGAAGAAGAATGTGTCAGGTTTGAGATTAACCATACACCAAAATGAGTCTGACTGAGATAGATTTTGTAAAATATGTAGTTCTTTTTTGTAAATTTGAGAATAAATTGATCATAATAATGTTATGAGTTCATCAATTCTATATCTCCATTTTGTTTTGGTTTAAATTTAAACATTAGTTGGTGGTTTTTATGCAGTGGTTTTGACTTTGAGAGCTTAGCTTCCATAACCACACCCAACACCCAAGTCTCTTTCACTGACCTTTTTGCATATGGCTGAGGTAACTAACTGTGCTAACCCCCAAAGTGGTTCTTCTCTTCTCTGTTTTCACCCCATTCTGTAGGTAACTGACCCTGACTTTACTAACTATCAGGTTTTTCCAAAGGAAAGCACAGGGCAGAAAGTTCATTCTTTGTTGTTTCAATGTCTAAGTAGAGAAATTTTTGGTTTCTTATTTTGGGTTGTTGGTGGGTAATGTCCTCTAGTTTCTGCCATTCAACAACTTGAAATTAGAGGCCGGGGAACTTAACAGTCTTGATTTCGTCTCTACTTCTGATTTTCTAATCTACCTGAGGGCCTTGATGCCAAAGGAAAAGGAAATCTTTGGTTTATGTTGTATTTGTAGAAAGGTTGTTGCCTTATGATGTCCTTGTAGTTTAGTTCTTGAGTTCAGGCCATGGTTTTGCCAAAGAGAAGAGAAGATTGGGAGAATTTAACTTTACTTTTTTGTTTGTCTCAAAAGCGTTTGACAACCAACATGTAATTGAGATGGATGATTAAATTAATAAAACGATTGAAAGATCTATCACATCCTTATTGGTATTTCTTACTTTTGTTATTCATGTTAACTCCTCTAATTACTCTTTCCAACCATA

mRNA sequence

ATGGGAAGTGATTTCTTTACCGAATCTCAAACGTGGGTTTCTTCTGTTAACGGAATTCGAGAAGACCCAGATGATGAAACTTCCATTGACGGAGGTGAGGGAATTGGGACGGATTCGGATTTCGATGAGTCGGCTCAAATGGGGGTGAAGAAGAGGATGATGAAGAAGAGGAGTCAGGTTTTGCTTGAAGGGTTTGTTGAGGATGAGGATGATTTGATGAGGACTAAGAGCTTGACGGATGAGGATCTTGATGAGCTTAAAGGCTGTGTAGATCTAGGCTTTGGTTTTAGCTATGATGAGATTCCGGAGCTCTGTAACACTCTCCCGGCTTTGGAGCTCTGTTATTCCATGAGCCAGAAGTACATGGACGATCACCAGAAGTCGCCGGAGAGTTCGCCGGCTTCGGCGGTTCCGGCCGACTCTTGCTCTTCTGTTTCCAGTCCGATTGCGAATTGGAAGATCTCCAGTCCTGGTGATCATCCAGAAGATGTTAAAGCGAGGCTCAAATTTTGGGCTCAGGCAGTGGCATGTACTGTTAGACTATGCAACTAA

Coding sequence (CDS)

ATGGGAAGTGATTTCTTTACCGAATCTCAAACGTGGGTTTCTTCTGTTAACGGAATTCGAGAAGACCCAGATGATGAAACTTCCATTGACGGAGGTGAGGGAATTGGGACGGATTCGGATTTCGATGAGTCGGCTCAAATGGGGGTGAAGAAGAGGATGATGAAGAAGAGGAGTCAGGTTTTGCTTGAAGGGTTTGTTGAGGATGAGGATGATTTGATGAGGACTAAGAGCTTGACGGATGAGGATCTTGATGAGCTTAAAGGCTGTGTAGATCTAGGCTTTGGTTTTAGCTATGATGAGATTCCGGAGCTCTGTAACACTCTCCCGGCTTTGGAGCTCTGTTATTCCATGAGCCAGAAGTACATGGACGATCACCAGAAGTCGCCGGAGAGTTCGCCGGCTTCGGCGGTTCCGGCCGACTCTTGCTCTTCTGTTTCCAGTCCGATTGCGAATTGGAAGATCTCCAGTCCTGGTGATCATCCAGAAGATGTTAAAGCGAGGCTCAAATTTTGGGCTCAGGCAGTGGCATGTACTGTTAGACTATGCAACTAA

Protein sequence

MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQKYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVRLCN

Homology

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BLAST of CsaV3_4G003160 vs. NCBI nr
Match: XP_004152108.1 (PREDICTED: uncharacterized protein LOC101213317 [Cucumis sativus] >KGN53057.1 hypothetical protein Csa_4G012530 [Cucumis sativus])

HSP 1 Score: 370.5 bits (950), Expect = 3.2e-99
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQV 60
           MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQV
Sbjct: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQV 60

Query: 61  LLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQK 120
           LLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQK
Sbjct: 61  LLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQK 120

Query: 121 YMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 180
           YMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR
Sbjct: 121 YMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 180

Query: 181 LCN 184
           LCN
Sbjct: 181 LCN 183

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BLAST of CsaV3_4G003160 vs. NCBI nr
Match: XP_008453998.1 (PREDICTED: uncharacterized protein LOC103494552 [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 2.6e-93
Identity = 173/184 (94.02%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKR-MMKKRSQ 60
           MGSDFF++S+TWVSSVNGIREDPDDETS++ GEGIG+DSDFDES QMG KKR MMKKR+Q
Sbjct: 1   MGSDFFSQSETWVSSVNGIREDPDDETSLEEGEGIGSDSDFDESVQMGAKKRMMMKKRNQ 60

Query: 61  VLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQ 120
           VLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQ
Sbjct: 61  VLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQ 120

Query: 121 KYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV 180
           KYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV
Sbjct: 121 KYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV 180

Query: 181 RLCN 184
           RLCN
Sbjct: 181 RLCN 184

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BLAST of CsaV3_4G003160 vs. NCBI nr
Match: XP_022955549.1 (uncharacterized protein LOC111457532 [Cucurbita moschata])

HSP 1 Score: 330.9 bits (847), Expect = 2.8e-87
Identity = 165/184 (89.67%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRM-MKKRSQ 60
           MGSD F+ES+TWVSSVNGIRE+PDDE SI+  EG+ +DSD DES QMGVKK+M MKKR+Q
Sbjct: 1   MGSDLFSESETWVSSVNGIREEPDDEISIEVEEGVVSDSDLDESDQMGVKKKMKMKKRNQ 60

Query: 61  VLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQ 120
           VLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQ
Sbjct: 61  VLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQ 120

Query: 121 KYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV 180
           KYMDDHQKSP SSPASA P DSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV
Sbjct: 121 KYMDDHQKSPVSSPASAAPVDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV 180

Query: 181 RLCN 184
           RLCN
Sbjct: 181 RLCN 184

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BLAST of CsaV3_4G003160 vs. NCBI nr
Match: XP_023526026.1 (uncharacterized protein LOC111789625 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.6 bits (841), Expect = 1.4e-86
Identity = 164/185 (88.65%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRM--MKKRS 60
           MGSD F+ES+ WVSSVNGIRE+PDDE SI+  EG+ +DSD DES QMGVKK+M  MKKR+
Sbjct: 1   MGSDLFSESEAWVSSVNGIREEPDDEISIEVEEGVVSDSDLDESDQMGVKKKMKKMKKRN 60

Query: 61  QVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMS 120
           QVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMS
Sbjct: 61  QVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMS 120

Query: 121 QKYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACT 180
           QKYMDDHQKSP SSPASA P DSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACT
Sbjct: 121 QKYMDDHQKSPVSSPASAAPVDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACT 180

Query: 181 VRLCN 184
           VRLCN
Sbjct: 181 VRLCN 185

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BLAST of CsaV3_4G003160 vs. NCBI nr
Match: XP_022979942.1 (uncharacterized protein LOC111479478 [Cucurbita maxima])

HSP 1 Score: 325.1 bits (832), Expect = 1.5e-85
Identity = 161/183 (87.98%), Postives = 171/183 (93.44%), Query Frame = 0


Query: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQV 60
           MGSD F+ES+TWVSSVNGIRE+PDDE SI+  EG+ +DSD DES QMGVK + MKKR+QV
Sbjct: 1   MGSDLFSESETWVSSVNGIREEPDDEISIEVEEGVVSDSDLDESDQMGVKMK-MKKRNQV 60

Query: 61  LLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQK 120
           LLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQK
Sbjct: 61  LLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQK 120

Query: 121 YMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 180
           YMDDHQKSP +SPA A+P DSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR
Sbjct: 121 YMDDHQKSPVTSPAQAIPVDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 180

Query: 181 LCN 184
           LCN
Sbjct: 181 LCN 182

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BLAST of CsaV3_4G003160 vs. TAIR10
Match: AT1G05870.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 191.0 bits (484), Expect = 6.3e-49
Identity = 107/193 (55.44%), Postives = 136/193 (70.47%), Query Frame = 0


Query: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQV 60
           MG      S  W +S N   E  D+    +    I +   F   A  G +K++ +K+SQV
Sbjct: 1   MGCVRCKSSDPWQTSANAF-ESVDESGINEAWVEISSRRSF--VAGEGSRKKLERKKSQV 60

Query: 61  LLEGFVE---------DEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPAL 120
           LLEG+VE          +DDL R+KSLTD+DL++L+GC+DLGFGFSYDEIPELCNTLPAL
Sbjct: 61  LLEGYVETASSSSVDDQKDDLTRSKSLTDDDLEDLRGCLDLGFGFSYDEIPELCNTLPAL 120

Query: 121 ELCYSMSQKYMDDHQ-KSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKF 180
           ELCYSMSQK++DD Q KSPE+S     P+    + ++PIANWKISSPGD+P+DVKARLK+
Sbjct: 121 ELCYSMSQKFLDDKQNKSPETSSVEDCPSPPLVT-ATPIANWKISSPGDNPDDVKARLKY 180

Query: 181 WAQAVACTVRLCN 184
           WAQAVACTV+LC+
Sbjct: 181 WAQAVACTVQLCS 189

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BLAST of CsaV3_4G003160 vs. TAIR10
Match: AT2G43340.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-45
Identity = 93/135 (68.89%), Postives = 106/135 (78.52%), Query Frame = 0


Query: 51  KRMMKKRSQVLLEGFVED---EDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNT 110
           K++ KK+S VLLEG+V D    DDL RTKSLTD+DL+ELKGCVDLGFGF+Y+EIPELCNT
Sbjct: 55  KKLEKKKSNVLLEGYVVDSAVNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEEIPELCNT 114

Query: 111 LPALELCYSMSQKYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKAR 170
           LPALELCYSMSQK++D                   S V SPIA+WKISSPGD+P+DVKAR
Sbjct: 115 LPALELCYSMSQKFIDQXXXXXXXXXXXXXXXVLDSPV-SPIASWKISSPGDNPDDVKAR 174

Query: 171 LKFWAQAVACTVRLC 183
           LKFWAQAVACTVRLC
Sbjct: 175 LKFWAQAVACTVRLC 188

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BLAST of CsaV3_4G003160 vs. TAIR10
Match: AT2G31560.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 179.1 bits (453), Expect = 2.5e-45
Identity = 89/135 (65.93%), Postives = 105/135 (77.78%), Query Frame = 0


Query: 50  KKRMMKKRSQVLLEGF-VEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTL 109
           +K++ KK+SQVLLEG+ ++D+DDL R KSLTD+DL+ELKGC+DLGFGFSYDEIPELCNTL
Sbjct: 69  RKKLEKKKSQVLLEGYALDDQDDLTRAKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTL 128

Query: 110 PALELCYSMSQKYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARL 169
           PALELCYSMSQK++ D                       PIANWKISSPGD P+DVKARL
Sbjct: 129 PALELCYSMSQKFL-DXXXXXXXXXXXXXXXXXXXXXXXPIANWKISSPGDDPDDVKARL 188

Query: 170 KFWAQAVACTVRLCN 184
           K+WAQ VACTVRLC+
Sbjct: 189 KYWAQTVACTVRLCS 202

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BLAST of CsaV3_4G003160 vs. TAIR10
Match: AT3G22690.1 (Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885))

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22
Identity = 54/97 (55.67%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 78  LTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQKYMDDHQKSPESSPASAV 137
           LTD+DL+ LKGC+DLGFGF+YDEIP LC TLPALELCYSMSQK +DD        P    
Sbjct: 843 LTDDDLEVLKGCLDLGFGFNYDEIPALCKTLPALELCYSMSQKNLDDKHTPSLQLPIGRS 902

Query: 138 PADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQA 175
              SC                D+P+DVKARLK WAQA
Sbjct: 903 LVPSC----------------DNPDDVKARLKCWAQA 923

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BLAST of CsaV3_4G003160 vs. TAIR10
Match: AT1G08790.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 88.6 bits (218), Expect = 4.4e-18
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 0


Query: 55  KKRSQVL--LEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALE 114
           ++R Q+L  LE   E  DD      LTDEDL ELKG ++LGFGF+ ++   L  TLPAL+
Sbjct: 59  RRRRQMLHHLEKHNEGGDD------LTDEDLSELKGSIELGFGFNEEQGQHLTTTLPALD 118

Query: 115 LCYSMSQKYMDDHQKSPESSPASAVP---ADSCSSVSSPIA---NWKISSPGDHPEDVKA 174
           L ++++++           S +S+ P    D  SS  SPI+   + K+ SPGD P+ VK 
Sbjct: 119 LYFAVTRQISPVSTPGSGGSSSSSRPTSLGDRSSSFGSPISDSDSLKVMSPGDDPQQVKT 178

Query: 175 RLKFWAQAVACTV 180
           RL+ WAQAVAC+V
Sbjct: 179 RLRHWAQAVACSV 185

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BLAST of CsaV3_4G003160 vs. TrEMBL
Match: tr|A0A0A0KXD6|A0A0A0KXD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012530 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.1e-99
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQV 60
           MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQV
Sbjct: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQV 60

Query: 61  LLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQK 120
           LLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQK
Sbjct: 61  LLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQK 120

Query: 121 YMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 180
           YMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR
Sbjct: 121 YMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 180

Query: 181 LCN 184
           LCN
Sbjct: 181 LCN 183

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BLAST of CsaV3_4G003160 vs. TrEMBL
Match: tr|A0A1S3BXQ6|A0A1S3BXQ6_CUCME (uncharacterized protein LOC103494552 OS=Cucumis melo OX=3656 GN=LOC103494552 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.7e-93
Identity = 173/184 (94.02%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGVKKR-MMKKRSQ 60
           MGSDFF++S+TWVSSVNGIREDPDDETS++ GEGIG+DSDFDES QMG KKR MMKKR+Q
Sbjct: 1   MGSDFFSQSETWVSSVNGIREDPDDETSLEEGEGIGSDSDFDESVQMGAKKRMMMKKRNQ 60

Query: 61  VLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQ 120
           VLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQ
Sbjct: 61  VLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQ 120

Query: 121 KYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV 180
           KYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV
Sbjct: 121 KYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV 180

Query: 181 RLCN 184
           RLCN
Sbjct: 181 RLCN 184

[Close]

BLAST of CsaV3_4G003160 vs. TrEMBL
Match: tr|A0A2I4DH97|A0A2I4DH97_9ROSI (uncharacterized protein LOC108980121 OS=Juglans regia OX=51240 GN=LOC108980121 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-60
Identity = 125/182 (68.68%), Postives = 147/182 (80.77%), Query Frame = 0


Query: 5   FFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGV-KKRMMKKRSQVLLE 64
           F  ES++WVSS+  I ++P+DET        G  +  +E +++ + KK+     +QVLLE
Sbjct: 4   FPCESESWVSSIISIHQNPEDETLESHQSNTGFLNQEEEWSKLNINKKKXXXXXNQVLLE 63

Query: 65  GFVE--DEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQKY 124
           G+VE  DEDDL RTKSLTDEDLDELKGC+DLGFGFSYDEIPELCNTLPALELCYSMSQK+
Sbjct: 64  GYVESADEDDLTRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKF 123

Query: 125 MDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVRL 184
           +D+HQKSP++  A A   DSC SVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVRL
Sbjct: 124 IDEHQKSPDN--AEAASTDSCPSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVRL 183

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BLAST of CsaV3_4G003160 vs. TrEMBL
Match: tr|A0A2P5FZZ9|A0A2P5FZZ9_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_005710 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.9e-58
Identity = 126/178 (70.79%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 8   ESQTWVSSVNGIREDPDDE--TSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQVLLEGF 67
           ES+ WVSS   I ++PD+E  T+      +   S F E  + G  KR   K++QVLLEG+
Sbjct: 7   ESEAWVSSNGSIGKNPDEESLTTPQLWRTMSCGSGFCEKKKSG--KRKTNKKNQVLLEGY 66

Query: 68  VE--DEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQKYMD 127
           VE  DEDDL RTKSLTDEDLDELKGC+DLGFGFSYDEIPELCNTLPALELCYSMSQKYMD
Sbjct: 67  VESADEDDLTRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKYMD 126

Query: 128 DHQKSPESSPA-SAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 181
           +HQKSP++S A S+   DSCSSVSSPIANWKISSPGDHPEDVKARLK+WAQ VACT R
Sbjct: 127 EHQKSPDNSMAVSSSAPDSCSSVSSPIANWKISSPGDHPEDVKARLKYWAQTVACTPR 182

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BLAST of CsaV3_4G003160 vs. TrEMBL
Match: tr|A0A2P5DNW0|A0A2P5DNW0_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_046850 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.9e-58
Identity = 127/178 (71.35%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 8   ESQTWVSSVNGIREDPDDE--TSIDGGEGIGTDSDFDESAQMGVKKRMMKKRSQVLLEGF 67
           ES+ WVSS   I E+PD+E  T+      +   S F E      KK    K++QVLLEG+
Sbjct: 7   ESEAWVSSNGSIGENPDEESLTTPQLWRTMSCGSGFREK-----KKSGTNKKNQVLLEGY 66

Query: 68  VE--DEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQKYMD 127
           VE  DEDDL RTKSLTDEDLDELKGC+DLGFGFSYDEIPELCNTLPALELCYSMSQKYMD
Sbjct: 67  VESVDEDDLTRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKYMD 126

Query: 128 DHQKSPESSPA-SAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 181
           +HQKSP++S A S+  +DSCSSVSSPIANWKISSPGDHPEDVKARLK+WAQAVACT R
Sbjct: 127 EHQKSPDNSVAVSSSASDSCSSVSSPIANWKISSPGDHPEDVKARLKYWAQAVACTPR 179

The following BLAST results are available for this feature:

BLAST of CsaV3_4G003160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152108.1	3.2e-99	100.00	PREDICTED: uncharacterized protein LOC101213317 [Cucumis sativus] >KGN53057.1 hy...	[more]
XP_008453998.1	2.6e-93	94.02	PREDICTED: uncharacterized protein LOC103494552 [Cucumis melo]	[more]
XP_022955549.1	2.8e-87	89.67	uncharacterized protein LOC111457532 [Cucurbita moschata]	[more]
XP_023526026.1	1.4e-86	88.65	uncharacterized protein LOC111789625 [Cucurbita pepo subsp. pepo]	[more]
XP_022979942.1	1.5e-85	87.98	uncharacterized protein LOC111479478 [Cucurbita maxima]	[more]

BLAST of CsaV3_4G003160 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05870.1	6.3e-49	55.44	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	1.5e-45	68.89	Protein of unknown function (DUF1685)	[more]
AT2G31560.1	2.5e-45	65.93	Protein of unknown function (DUF1685)	[more]
AT3G22690.1	1.0e-22	55.67	Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repe...	[more]
AT1G08790.1	4.4e-18	42.86	Protein of unknown function (DUF1685)	[more]

BLAST of CsaV3_4G003160 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G003160 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KXD6\|A0A0A0KXD6_CUCSA	2.1e-99	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012530 PE=4 SV=1	[more]
tr\|A0A1S3BXQ6\|A0A1S3BXQ6_CUCME	1.7e-93	94.02	uncharacterized protein LOC103494552 OS=Cucumis melo OX=3656 GN=LOC103494552 PE=...	[more]
tr\|A0A2I4DH97\|A0A2I4DH97_9ROSI	1.1e-60	68.68	uncharacterized protein LOC108980121 OS=Juglans regia OX=51240 GN=LOC108980121 P...	[more]
tr\|A0A2P5FZZ9\|A0A2P5FZZ9_9ROSA	6.9e-58	70.79	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_005710 PE=4 S...	[more]
tr\|A0A2P5DNW0\|A0A2P5DNW0_PARAD	6.9e-58	71.35	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_046850 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006428	isoleucyl-tRNA aminoacylation
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006450	regulation of translational fidelity
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0007010	cytoskeleton organization
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0002161	aminoacyl-tRNA editing activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004822	isoleucine-tRNA ligase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G003160.1	CsaV3_4G003160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 78..134 e-value: 3.5E-28 score: 97.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR31865:SF0	SUBFAMILY NOT NAMED	coord: 45..183
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 45..183

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G003160	CSPI04G03170	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G003160	Cucsa.094970	Cucumber (Gy14) v1	cgycucB102
CsaV3_4G003160	CmaCh06G016640	Cucurbita maxima (Rimu)	cmacucB0987
CsaV3_4G003160	CmaCh14G014650	Cucurbita maxima (Rimu)	cmacucB0298
CsaV3_4G003160	CmoCh06G016580	Cucurbita moschata (Rifu)	cmocucB0971
CsaV3_4G003160	CmoCh14G015020	Cucurbita moschata (Rifu)	cmocucB0291
CsaV3_4G003160	Cp4.1LG08g05930	Cucurbita pepo (Zucchini)	cpecucB1065
CsaV3_4G003160	Cp4.1LG03g12710	Cucurbita pepo (Zucchini)	cpecucB0767
CsaV3_4G003160	CsGy4G003060	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G003160	Carg06617	Silver-seed gourd	carcucB0137
CsaV3_4G003160	Carg27255	Silver-seed gourd	carcucB0427
CsaV3_4G003160	Carg15470	Silver-seed gourd	carcucB0733
CsaV3_4G003160	Cla010858	Watermelon (97103) v1	cucwmB325
CsaV3_4G003160	MELO3C017731	Melon (DHL92) v3.5.1	cucmeB315
CsaV3_4G003160	ClCG07G015530	Watermelon (Charleston Gray)	cucwcgB337
CsaV3_4G003160	Lsi07G000310	Bottle gourd (USVL1VR-Ls)	cuclsiB322
CsaV3_4G003160	MELO3C017731.2	Melon (DHL92) v3.6.1	cucmedB307
CsaV3_4G003160	Cla97C07G142510	Watermelon (97103) v2	cucwmbB325
CsaV3_4G003160	Bhi01G002160	Wax gourd	cucwgoB375

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G003160	Wild cucumber (PI 183967)	cpicucB218
CsaV3_4G003160	Bottle gourd (USVL1VR-Ls)	cuclsiB330
CsaV3_4G003160	Melon (DHL92) v3.5.1	cucmeB322
CsaV3_4G003160	Melon (DHL92) v3.6.1	cucmedB315
CsaV3_4G003160	Watermelon (Charleston Gray)	cucwcgB340
CsaV3_4G003160	Watermelon (97103) v1	cucwmB331