Carg15470 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15470
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function (DUF1685)
Location	Cucurbita_argyrosperma_scaffold_069 : 325787 .. 326817 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGTGGTTTCTTTAGCGAATCTGAATTGTGGGTTTCTTCTGTGAATGGAGTTCGGGAAGACCCTGATGAGGATACCTCCATTGAAGAGGGTGAGGAAATCGGGTCGGATTCGGATTTGGACGAGTCGGTTCAAATGGGGATGGAAAATTTGACGAAGAAGATGAGGAAGAAGAAGAAGAATCATGTTTTGCTTGAGGGGTTTGTGGAGGATGAGGATGAGTTGATGAGGACGAAGAGCTTGACGGATGAGGATCTGGATGAGCTTAAAGGGTGTGTGGATCTAGGGTTTGGTTTCAGTTACGATGAGATTCCGGAGCTCTGCAACACTCTGCCGGCGTTGGAGCTCTGTTATTCCATGAGCCAAAAGTACATGGACGAGCACCAGAAGTCGCCGGAGAGCTCGACGGCGTTGGATTCGTGTTCGTCAGTGTCGAGTCCGATTGCGAATTGGAAGATCTCCAGTCCTGGTTAGTGGCTCTTTTCTGTTGGATCTTGATTTTGGAACTGGATTTGTTTCTTTTTTTCGTGCATTTCTGTTTATCTGGATTATGTAGCTCGTTTATGATTTGAAAGCAGTTTGAATCGAGAATGAGGTGATGACTGTTGAAATTTAGGGACTAGAATGGAGTTTTTCCAATAGTTAGAACTCTAAAATAGAATGGATAAGTATGAGAATTGACAGATTTAGGGTCTGTTTAGGTTTTTGTTCTTTACTGGTGGGGTGGAGGCAACAGTTTTCGATTTGTCTTCACTCTAACCTGTGCTTATCACTTTGAATTTCGTGGGGATTCTCAACTTATAACTTCAAAACTTATCAGATACAAACCATATGATTATAATGCACAGGATTCCAGTTTGTATTTGTCCTTCTTTTCTCTAGATCACAATTTTTTTTATACCTTTTAAAGGAATGGTTCTGAATTTTTGGTGATGTTTGGTCATATAGGTGATCATCCAGAAGATGTTAAGGCAAGGCTCAAATTTTGGGCTCAGGCAGTGGCATGTACTGTTAGATTATGCAACTAA

mRNA sequence

ATGGGAAGTGGTTTCTTTAGCGAATCTGAATTGTGGGTTTCTTCTGTGAATGGAGTTCGGGAAGACCCTGATGAGGATACCTCCATTGAAGAGGGTGAGGAAATCGGGTCGGATTCGGATTTGGACGAGTCGGTTCAAATGGGGATGGAAAATTTGACGAAGAAGATGAGGAAGAAGAAGAAGAATCATGTTTTGCTTGAGGGGTTTGTGGAGGATGAGGATGAGTTGATGAGGACGAAGAGCTTGACGGATGAGGATCTGGATGAGCTTAAAGGGTGTGTGGATCTAGGGTTTGGTTTCAGTTACGATGAGATTCCGGAGCTCTGCAACACTCTGCCGGCGTTGGAGCTCTGTTATTCCATGAGCCAAAAGTACATGGACGAGCACCAGAAGTCGCCGGAGAGCTCGACGGCGTTGGATTCGTGTTCGTCAGTGTCGAGTCCGATTGCGAATTGGAAGATCTCCAGTCCTGGTGATCATCCAGAAGATGTTAAGGCAAGGCTCAAATTTTGGGCTCAGGCAGTGGCATGTACTGTTAGATTATGCAACTAA

Coding sequence (CDS)

ATGGGAAGTGGTTTCTTTAGCGAATCTGAATTGTGGGTTTCTTCTGTGAATGGAGTTCGGGAAGACCCTGATGAGGATACCTCCATTGAAGAGGGTGAGGAAATCGGGTCGGATTCGGATTTGGACGAGTCGGTTCAAATGGGGATGGAAAATTTGACGAAGAAGATGAGGAAGAAGAAGAAGAATCATGTTTTGCTTGAGGGGTTTGTGGAGGATGAGGATGAGTTGATGAGGACGAAGAGCTTGACGGATGAGGATCTGGATGAGCTTAAAGGGTGTGTGGATCTAGGGTTTGGTTTCAGTTACGATGAGATTCCGGAGCTCTGCAACACTCTGCCGGCGTTGGAGCTCTGTTATTCCATGAGCCAAAAGTACATGGACGAGCACCAGAAGTCGCCGGAGAGCTCGACGGCGTTGGATTCGTGTTCGTCAGTGTCGAGTCCGATTGCGAATTGGAAGATCTCCAGTCCTGGTGATCATCCAGAAGATGTTAAGGCAAGGCTCAAATTTTGGGCTCAGGCAGTGGCATGTACTGTTAGATTATGCAACTAA

Protein sequence

MGSGFFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKKKNHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQKYMDEHQKSPESSTALDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVRLCN

Homology

[Close]

BLAST of Carg15470 vs. NCBI nr
Match: XP_022972236.1 (uncharacterized protein LOC111470827 [Cucurbita maxima])

HSP 1 Score: 351.3 bits (900), Expect = 2.0e-93
Identity = 177/183 (96.72%), Postives = 179/183 (97.81%), Query Frame = 0


Query: 1   MGSGFFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKK 60
           MGSGFFSESELW   VNGVRED +EDTSIEEGEEIGSDSDLDESVQMGMENLTKKM+KKK
Sbjct: 1   MGSGFFSESELW---VNGVREDLEEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMKKKK 60

Query: 61  KNHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120
           KNHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS
Sbjct: 61  KNHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120

Query: 121 MSQKYMDEHQKSPESSTALDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 180
           MSQKYMDEHQKSPESSTALDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR
Sbjct: 121 MSQKYMDEHQKSPESSTALDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 180

Query: 181 LCN 184
           LCN
Sbjct: 181 LCN 180

[Close]

BLAST of Carg15470 vs. NCBI nr
Match: XP_008453998.1 (PREDICTED: uncharacterized protein LOC103494552 [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 7.1e-83
Identity = 160/187 (85.56%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MGSGFFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKK 60
           MGS FFS+SE WVSSVNG+REDPD++TS+EEGE IGSDSD DESVQMG +   K+M  KK
Sbjct: 1   MGSDFFSQSETWVSSVNGIREDPDDETSLEEGEGIGSDSDFDESVQMGAK---KRMMMKK 60

Query: 61  KNHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120
           +N VLLEGFVEDED+LMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS
Sbjct: 61  RNQVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120

Query: 121 MSQKYMDEHQKSPESSTA----LDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA 180
           MSQKYMD+HQKSPESS A     DSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA
Sbjct: 121 MSQKYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA 180

Query: 181 CTVRLCN 184
           CTVRLCN
Sbjct: 181 CTVRLCN 184

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BLAST of Carg15470 vs. NCBI nr
Match: XP_022932682.1 (uncharacterized protein LOC111439155 [Cucurbita moschata] >XP_023540862.1 uncharacterized protein LOC111801110 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.1 bits (793), Expect = 5.1e-81
Identity = 160/184 (86.96%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 1   MGSGFFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKK-MRKK 60
           MGSGFFSESELWVSSVN VREDPDED+SIEEGEE              MENLTKK     
Sbjct: 1   MGSGFFSESELWVSSVNEVREDPDEDSSIEEGEEXXXXXXXXXXXXXXMENLTKKXXXXX 60

Query: 61  KKNHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCY 120
              HVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCY
Sbjct: 61  XXXHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCY 120

Query: 121 SMSQKYMDEHQKSPESSTALDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV 180
           SMSQKYMDEHQKSPESSTALDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV
Sbjct: 121 SMSQKYMDEHQKSPESSTALDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTV 180

Query: 181 RLCN 184
           RLCN
Sbjct: 181 RLCN 184

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BLAST of Carg15470 vs. NCBI nr
Match: XP_004152108.1 (PREDICTED: uncharacterized protein LOC101213317 [Cucumis sativus] >KGN53057.1 hypothetical protein Csa_4G012530 [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 5.7e-80
Identity = 155/187 (82.89%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 1   MGSGFFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKK 60
           MGS FF+ES+ WVSSVNG+REDPD++TSI+ GE IG+DSD DES QMG+    KK   KK
Sbjct: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGV----KKRMMKK 60

Query: 61  KNHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120
           ++ VLLEGFVEDED+LMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS
Sbjct: 61  RSQVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120

Query: 121 MSQKYMDEHQKSPESSTA----LDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA 180
           MSQKYMD+HQKSPESS A     DSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA
Sbjct: 121 MSQKYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA 180

Query: 181 CTVRLCN 184
           CTVRLCN
Sbjct: 181 CTVRLCN 183

[Close]

BLAST of Carg15470 vs. NCBI nr
Match: XP_022955549.1 (uncharacterized protein LOC111457532 [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 155/187 (82.89%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 1   MGSGFFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKK 60
           MGS  FSESE WVSSVNG+RE+PD++ SIE  E + SDSDLDES QMG++   KKM+ KK
Sbjct: 1   MGSDLFSESETWVSSVNGIREEPDDEISIEVEEGVVSDSDLDESDQMGVK---KKMKMKK 60

Query: 61  KNHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120
           +N VLLEGFVEDED+LMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS
Sbjct: 61  RNQVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120

Query: 121 MSQKYMDEHQKSPESSTA----LDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA 180
           MSQKYMD+HQKSP SS A    +DSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA
Sbjct: 121 MSQKYMDDHQKSPVSSPASAAPVDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA 180

Query: 181 CTVRLCN 184
           CTVRLCN
Sbjct: 181 CTVRLCN 184

[Close]

BLAST of Carg15470 vs. TAIR10
Match: AT1G05870.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 184.9 bits (468), Expect = 4.5e-47
Identity = 108/196 (55.10%), Postives = 136/196 (69.39%), Query Frame = 0


Query: 1   MGSGFFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKK 60
           MG      S+ W +S N   E  DE    E   EI S         +  E   KK+ ++K
Sbjct: 1   MGCVRCKSSDPWQTSANAF-ESVDESGINEAWVEISSRRSF-----VAGEGSRKKL-ERK 60

Query: 61  KNHVLLEGFVE---------DEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNT 120
           K+ VLLEG+VE          +D+L R+KSLTD+DL++L+GC+DLGFGFSYDEIPELCNT
Sbjct: 61  KSQVLLEGYVETASSSSVDDQKDDLTRSKSLTDDDLEDLRGCLDLGFGFSYDEIPELCNT 120

Query: 121 LPALELCYSMSQKYMDEHQ-KSPESSTALDSCSS---VSSPIANWKISSPGDHPEDVKAR 180
           LPALELCYSMSQK++D+ Q KSPE+S+  D  S     ++PIANWKISSPGD+P+DVKAR
Sbjct: 121 LPALELCYSMSQKFLDDKQNKSPETSSVEDCPSPPLVTATPIANWKISSPGDNPDDVKAR 180

Query: 181 LKFWAQAVACTVRLCN 184
           LK+WAQAVACTV+LC+
Sbjct: 181 LKYWAQAVACTVQLCS 189

[Close]

BLAST of Carg15470 vs. TAIR10
Match: AT2G43340.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 179.9 bits (455), Expect = 1.4e-45
Identity = 94/136 (69.12%), Postives = 107/136 (78.68%), Query Frame = 0


Query: 53  TKKMRKKKKNHVLLEGFVED---EDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELC 112
           TKK+ KKK N VLLEG+V D    D+L RTKSLTD+DL+ELKGCVDLGFGF+Y+EIPELC
Sbjct: 54  TKKLEKKKSN-VLLEGYVVDSAVNDDLKRTKSLTDDDLEELKGCVDLGFGFNYEEIPELC 113

Query: 113 NTLPALELCYSMSQKYMDEHQKSPESSTALDS---CSSVSSPIANWKISSPGDHPEDVKA 172
           NTLPALELCYSMSQK++D+                  S  SPIA+WKISSPGD+P+DVKA
Sbjct: 114 NTLPALELCYSMSQKFIDQXXXXXXXXXXXXXXXVLDSPVSPIASWKISSPGDNPDDVKA 173

Query: 173 RLKFWAQAVACTVRLC 183
           RLKFWAQAVACTVRLC
Sbjct: 174 RLKFWAQAVACTVRLC 188

[Close]

BLAST of Carg15470 vs. TAIR10
Match: AT2G31560.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 174.9 bits (442), Expect = 4.7e-44
Identity = 87/135 (64.44%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 53  TKKMRKKKKNHVLLEGF-VEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNT 112
           ++K  +KKK+ VLLEG+ ++D+D+L R KSLTD+DL+ELKGC+DLGFGFSYDEIPELCNT
Sbjct: 68  SRKKLEKKKSQVLLEGYALDDQDDLTRAKSLTDDDLEELKGCLDLGFGFSYDEIPELCNT 127

Query: 113 LPALELCYSMSQKYMD---EHQKSPESSTALDSCSSVSSPIANWKISSPGDHPEDVKARL 172
           LPALELCYSMSQK++D                       PIANWKISSPGD P+DVKARL
Sbjct: 128 LPALELCYSMSQKFLDXXXXXXXXXXXXXXXXXXXXXXXPIANWKISSPGDDPDDVKARL 187

Query: 173 KFWAQAVACTVRLCN 184
           K+WAQ VACTVRLC+
Sbjct: 188 KYWAQTVACTVRLCS 202

[Close]

BLAST of Carg15470 vs. TAIR10
Match: AT3G22690.1 (Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885))

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-22
Identity = 54/93 (58.06%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 82  LTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQKYMDEHQKSPESSTALDS 141
           LTD+DL+ LKGC+DLGFGF+YDEIP LC TLPALELCYSMSQK +D+             
Sbjct: 843 LTDDDLEVLKGCLDLGFGFNYDEIPALCKTLPALELCYSMSQKNLDDKH----------- 902

Query: 142 CSSVSSPIANWKISSPGDHPEDVKARLKFWAQA 175
             S+  PI    + S  D+P+DVKARLK WAQA
Sbjct: 903 TPSLQLPIGRSLVPS-CDNPDDVKARLKCWAQA 923

[Close]

BLAST of Carg15470 vs. TAIR10
Match: AT4G33985.1 (Protein of unknown function (DUF1685))

HSP 1 Score: 84.3 bits (207), Expect = 8.3e-17
Identity = 53/109 (48.62%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 76  LMRTKSLTDEDLDELKGCVDLGFGF---SYDEIPELCNTLPALELCYSMSQKYMDE-HQK 135
           L R+KS+TDEDL+ELKGC++LGFGF   S D  P L  TLPAL L  +++++Y     + 
Sbjct: 43  LGRSKSVTDEDLEELKGCIELGFGFEPDSPDLDPRLSETLPALGLYCAVNKQYSSRLSRT 102

Query: 136 SPESSTALDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 181
           S  SS A +  +S SS      I   GD PE +K RLK WAQ VAC+V+
Sbjct: 103 SSLSSIASEGENSNSST----TIVDQGDDPETMKLRLKQWAQVVACSVK 147

[Close]

BLAST of Carg15470 vs. TrEMBL
Match: tr|A0A1S3BXQ6|A0A1S3BXQ6_CUCME (uncharacterized protein LOC103494552 OS=Cucumis melo OX=3656 GN=LOC103494552 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 4.7e-83
Identity = 160/187 (85.56%), Postives = 170/187 (90.91%), Query Frame = 0


Query: 1   MGSGFFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKK 60
           MGS FFS+SE WVSSVNG+REDPD++TS+EEGE IGSDSD DESVQMG +   K+M  KK
Sbjct: 1   MGSDFFSQSETWVSSVNGIREDPDDETSLEEGEGIGSDSDFDESVQMGAK---KRMMMKK 60

Query: 61  KNHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120
           +N VLLEGFVEDED+LMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS
Sbjct: 61  RNQVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120

Query: 121 MSQKYMDEHQKSPESSTA----LDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA 180
           MSQKYMD+HQKSPESS A     DSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA
Sbjct: 121 MSQKYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA 180

Query: 181 CTVRLCN 184
           CTVRLCN
Sbjct: 181 CTVRLCN 184

[Close]

BLAST of Carg15470 vs. TrEMBL
Match: tr|A0A0A0KXD6|A0A0A0KXD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012530 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 3.7e-80
Identity = 155/187 (82.89%), Postives = 167/187 (89.30%), Query Frame = 0


Query: 1   MGSGFFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKK 60
           MGS FF+ES+ WVSSVNG+REDPD++TSI+ GE IG+DSD DES QMG+    KK   KK
Sbjct: 1   MGSDFFTESQTWVSSVNGIREDPDDETSIDGGEGIGTDSDFDESAQMGV----KKRMMKK 60

Query: 61  KNHVLLEGFVEDEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120
           ++ VLLEGFVEDED+LMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS
Sbjct: 61  RSQVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYS 120

Query: 121 MSQKYMDEHQKSPESSTA----LDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA 180
           MSQKYMD+HQKSPESS A     DSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA
Sbjct: 121 MSQKYMDDHQKSPESSPASAVPADSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVA 180

Query: 181 CTVRLCN 184
           CTVRLCN
Sbjct: 181 CTVRLCN 183

[Close]

BLAST of Carg15470 vs. TrEMBL
Match: tr|A0A2I4DH97|A0A2I4DH97_9ROSI (uncharacterized protein LOC108980121 OS=Juglans regia OX=51240 GN=LOC108980121 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.8e-59
Identity = 123/183 (67.21%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 5   FFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKKKNHV 64
           F  ESE WVSS+  + ++P+++T        G    L++  +    N+ KK      N V
Sbjct: 4   FPCESESWVSSIISIHQNPEDETLESHQSNTGF---LNQEEEWSKLNINKKKXXXXXNQV 63

Query: 65  LLEGFVE--DEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMS 124
           LLEG+VE  DED+L RTKSLTDEDLDELKGC+DLGFGFSYDEIPELCNTLPALELCYSMS
Sbjct: 64  LLEGYVESADEDDLTRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCYSMS 123

Query: 125 QKYMDEHQKSPESSTA--LDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 184
           QK++DEHQKSP+++ A   DSC SVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR
Sbjct: 124 QKFIDEHQKSPDNAEAASTDSCPSVSSPIANWKISSPGDHPEDVKARLKFWAQAVACTVR 183

[Close]

BLAST of Carg15470 vs. TrEMBL
Match: tr|A0A2P5DNW0|A0A2P5DNW0_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_046850 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-57
Identity = 128/186 (68.82%), Postives = 141/186 (75.81%), Query Frame = 0


Query: 4   GFFSESELWVSSVNGVREDPDED--TSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKKK 63
           G+  ESE WVSS   + E+PDE+  T+ +    +   S   E          KK    KK
Sbjct: 3   GWACESEAWVSSNGSIGENPDEESLTTPQLWRTMSCGSGFREK---------KKSGTNKK 62

Query: 64  NHVLLEGFVE--DEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCY 123
           N VLLEG+VE  DED+L RTKSLTDEDLDELKGC+DLGFGFSYDEIPELCNTLPALELCY
Sbjct: 63  NQVLLEGYVESVDEDDLTRTKSLTDEDLDELKGCLDLGFGFSYDEIPELCNTLPALELCY 122

Query: 124 SMSQKYMDEHQKSPE-----SSTALDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQA 181
           SMSQKYMDEHQKSP+     SS+A DSCSSVSSPIANWKISSPGDHPEDVKARLK+WAQA
Sbjct: 123 SMSQKYMDEHQKSPDNSVAVSSSASDSCSSVSSPIANWKISSPGDHPEDVKARLKYWAQA 179

[Close]

BLAST of Carg15470 vs. TrEMBL
Match: tr|M5XT12|M5XT12_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G189800 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.4e-57
Identity = 126/188 (67.02%), Postives = 146/188 (77.66%), Query Frame = 0


Query: 4   GFFSESELWVSSVNGVREDPDEDTSIEEGEEIGSDSDLDESVQMGMENLTKKMRKKKK-- 63
           GF   +E WVSS   +R++PDE T     + + + S  +  + +G E   K    K K  
Sbjct: 12  GFTCGTESWVSS---IRKNPDEQTH----QSLQTSSSSEFMLGIGEEEWPKLNSLKSKXX 71

Query: 64  ---NHVLLEGFVE--DEDELMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALE 123
              N VLLEG+VE  DED+L RTKSLTDEDLDELKGC+DLGFGFSY+EIPELCNTLPALE
Sbjct: 72  XXXNQVLLEGYVESADEDDLSRTKSLTDEDLDELKGCLDLGFGFSYEEIPELCNTLPALE 131

Query: 124 LCYSMSQKYMDEHQKSPESS-TALDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAV 183
           LCYSMSQK+MDE+QKSPE+S T +DSC SVSSPIANWKISSPGDHPEDVKARLK+WAQAV
Sbjct: 132 LCYSMSQKFMDENQKSPENSPTTVDSCPSVSSPIANWKISSPGDHPEDVKARLKYWAQAV 191

The following BLAST results are available for this feature:

BLAST of Carg15470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972236.1	2.0e-93	96.72	uncharacterized protein LOC111470827 [Cucurbita maxima]	[more]
XP_008453998.1	7.1e-83	85.56	PREDICTED: uncharacterized protein LOC103494552 [Cucumis melo]	[more]
XP_022932682.1	5.1e-81	86.96	uncharacterized protein LOC111439155 [Cucurbita moschata] >XP_023540862.1 unchar...	[more]
XP_004152108.1	5.7e-80	82.89	PREDICTED: uncharacterized protein LOC101213317 [Cucumis sativus] >KGN53057.1 hy...	[more]
XP_022955549.1	1.1e-78	82.89	uncharacterized protein LOC111457532 [Cucurbita moschata]	[more]

BLAST of Carg15470 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05870.1	4.5e-47	55.10	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	1.4e-45	69.12	Protein of unknown function (DUF1685)	[more]
AT2G31560.1	4.7e-44	64.44	Protein of unknown function (DUF1685)	[more]
AT3G22690.1	1.7e-22	58.06	Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repe...	[more]
AT4G33985.1	8.3e-17	48.62	Protein of unknown function (DUF1685)	[more]

BLAST of Carg15470 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg15470 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BXQ6\|A0A1S3BXQ6_CUCME	4.7e-83	85.56	uncharacterized protein LOC103494552 OS=Cucumis melo OX=3656 GN=LOC103494552 PE=...	[more]
tr\|A0A0A0KXD6\|A0A0A0KXD6_CUCSA	3.7e-80	82.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012530 PE=4 SV=1	[more]
tr\|A0A2I4DH97\|A0A2I4DH97_9ROSI	2.8e-59	67.21	uncharacterized protein LOC108980121 OS=Juglans regia OX=51240 GN=LOC108980121 P...	[more]
tr\|A0A2P5DNW0\|A0A2P5DNW0_PARAD	1.2e-57	68.82	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_046850 PE...	[more]
tr\|M5XT12\|M5XT12_PRUPE	3.4e-57	67.02	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G189800 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15470-RA	Carg15470-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 82..137 e-value: 3.7E-28 score: 97.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..40
None	No IPR available	PANTHER	PTHR31865:SF0	SUBFAMILY NOT NAMED	coord: 33..183
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 33..183

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15470	Cla010858	Watermelon (97103) v1	carwmB0690
Carg15470	Csa4G012530	Cucumber (Chinese Long) v2	carcuB0716
Carg15470	MELO3C017731	Melon (DHL92) v3.5.1	carmeB0694
Carg15470	ClCG07G015530	Watermelon (Charleston Gray)	carwcgB0670
Carg15470	CSPI04G03170	Wild cucumber (PI 183967)	carcpiB0730
Carg15470	Cucsa.094970	Cucumber (Gy14) v1	carcgyB0775
Carg15470	CmaCh06G016640	Cucurbita maxima (Rimu)	carcmaB0974
Carg15470	CmoCh14G015020	Cucurbita moschata (Rifu)	carcmoB0946
Carg15470	CmoCh06G016580	Cucurbita moschata (Rifu)	carcmoB0947
Carg15470	Lsi07G000310	Bottle gourd (USVL1VR-Ls)	carlsiB634
Carg15470	Cp4.1LG08g05930	Cucurbita pepo (Zucchini)	carcpeB0974
Carg15470	Cp4.1LG03g12710	Cucurbita pepo (Zucchini)	carcpeB0973
Carg15470	CsGy4G003060	Cucumber (Gy14) v2	carcgybB0693
Carg15470	MELO3C017731.2	Melon (DHL92) v3.6.1	carmedB0707
Carg15470	CsaV3_4G003160	Cucumber (Chinese Long) v3	carcucB0733
Carg15470	Cla97C07G142510	Watermelon (97103) v2	carwmbB0722
Carg15470	Bhi01G002160	Wax gourd	carwgoB0815

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15470	Carg06617	Silver-seed gourd	carcarB142

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15470	Cucurbita maxima (Rimu)	carcmaB0972