CsaV3_3G043490 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G043490
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	SNARE associated Golgi protein family
Location	chr3 : 35332338 .. 35336613 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAAAGCAACACAGCACACTGTTGTAAGAGTTGATTAGAAATACAATTGTGAAATGTAAAGACAATATGAGAGAATAGAAATAAGTAAGGTAGGTGGTGGGTGGTGGGTGGTGTGAGATTGGAAGTGAAGAGTACTAACTTGAAGTTGAAGAGTTTGAAATAGTCGGCTCCATCATTTAGGGTTAAAAGCCTCAAATGACCCAATTCCCTAAACCACCCTTCTTCTACATCGTTGGGTTGCGGTTACTCATGTTCTTGGATTGAAGAAGATTCAAAACAAAAAAAAAGAAATTTCCTCTCTTTGTTCGATTGAGTTGTTGAATTCAATATATTTTTCAGTTTGACCCAATATTTACGTTTGTTTAACATTTTTGAGATCTAGGAGATTTAAATTATTATTATTATTATTATCAAAATGATCTTTTTCCTTTAAAAAAAAATAAAAAGAAAAAAGAAAAGAAAAGAAAAGGGAAAAAGTGGGGGGTGGGGGGTTTGTGGGTATCCGCAATCTGGTGAGTGCATATTCTCACATTTCCAAACCAATATAGCCTATGAATCAATAATTGTTTAAACAGTCGGTGGTACTCTCGGCGCCGGACGGTTTCGACCATTATCTAATCATGGGAGCTGCTTGGGGACGGTGGTCCAAATTAGCCGCTATAGTGGCGGTGGTGGCCATTCTTAGACAATTAGGGAAGACATACGGATGGGAATTTGATAGAGATGCGGCTCTCAAGGTTTTCACCCAATGGTCTGATCGATTGGGGGTATGGGCCATGCCTGCCTATGTCGGCATCCATACCTTCACACTTGCTCTCTGTTTGCCTTATGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTTTTCGGTTTCTTCCCTGCCGTCATTTGCGTTTTCTTTGCCAAGGTCCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTTTATCTCAATTTTATTCTTGTCCTATTATTATTATTATTATTTTTAAATTTCATTCTGAGTTTATGCGACGTTTATAATGTTTTATTTTCTTGCTTTGGTTTAAGATATGTTTGTTAGTTGGGCTGTTCTGTTGTTTACATTTTGGGGATTTTAATTTCTATTTTGGGTTCCTTGAAATGGATTAGTTTTCCCTGATGCTGTACTTTGAAGACAGGCTGAATTACGTCCTTGGTTTGCGTAGATAAGTGAAATGAATGAAGTTTTGTTGAATTTCTTCTGTTGGGTATTGTTGATAGAACAACCATTGCTTACTGTGTTGTACCCTTTTTGAAGATATTTGGGTATAGTCTTTAGTGTATACTGTATAATCAAGGCAGAGATAATGTATACTGTCAGTACTTAACAGTTTTCATATGTTTGGGAACGGAAACAGAAACTATTCATTAGTACAGTTTTTATGAGTATTGTCTACTGTATCAACCAAGCCAAGTAACGAAAGGGGAGATGAGAAATCCACTGTAACCCCAATTGGCATTGACCATCAAGACGTTGGAGTTGGAAAGTTCTTTGGAGGAAGTGTACCAATTAGAAGAAAAGGATATAACTAGGTCCGTCAAGTCTTGGCAAACATCTTACTTTAAACACCTTATATGATTTCTTTTGAAACCGCTGCATTCTAGGTAACAAATATTAGCACTGTAGTACCAAAGAATCTTTGCTTGGCCGGCCTCTAAAGGGATGGGGATGGCCTGAAGAAGTTGAACTAGAGCTGCCACTTTATTTTAAACACCTTTTATGATTTCTTTTGAAACTGCTGCATTCAAGATAACAAATATTAGCATTGCAGTACCAAAGAATCTTTGCTTGGCCGGCCTCTAAAGAGATGGAGATGGCATGAAGAAGTTGAACTAGACCTACCACTTTATTTTAGGGAAGTACTAACAAAGGTTAGATTGATTAAACGACTTTCCCCATCTTCTAGCGGGAAAGGAGCCAGGTGAACTTGGATTGACCCTTGGGTAAGACGGAAAACAGACAATGTGAAAAAGACTTGGAATGTTGACTGCAACTTTTGGGATCATAACCTTGTAAGGAATTTCAAAGTTGAGGAGGCTATCTAATGGGCTGATCTTAGCATGGTCTTAGCTCCGATCACCCTCTTTCAGCTGTCTGATGCTGGAAATGGCCTCTCAATTCTCGGTAGACATGTATCTTCTAAATCTCTCTTAGCTGATATGGGTTATAAAATCAATATTTTTGAGCCATCTTTGGTTATAGAATCAATATTGGTTATATGCATTTGGAAGAAAAGTACCCAAAGAAGATCAAGTGTTTTCTCTGGGAATTGGCTCATAAGGCCATACAACAAAATTCTCTTTAAGAGATCGTTGGTCCTTCTACGTGGAGTTGATAATTCTGAAGTTAGTATGTTTGAATTGGGAAGTTTGTGTTTGGCCTGTAGAGTTGGAAGCTGGAGTTCCTCAATTTATGTGATAAGTAAAAAAAGAAGGGAAGATGAAATTACTCAATAAATGTGCATCCCTACTAAACAATTGGGGTAGCTTATTGTAATTCTATGGATTGTATATCCTTTTAGGGAATTTACTCATCAATGAAATCATTTCTTATAAAAAAAATGAAATAATGGGTGATTCTAGTCATCTTTGCAAGAGGTGCACAAACTTGTGTACTACGTCTTTTTGGGCAACATTTTCTGCAATTTGTTTTGTACTTTTGTTGCGTGTTCAACCGATCTTAGAATTTTTTATTTTGAAATGAACTTGTCCTACCAGCTCCTAAGGATTTGTTTCATTAGAAAGAGTCCTAAAAACACAAATTTATAGGTAGAGGATCCACTAATCTTTAATTGAACACCAAATGCCCTCTATTGATGAGCTTTCTGTGGCCACATCCTCGAATGGAGGTAAGTGAGCAGTGGCTTCTTTACCTGCAAACTGGTTTTCATAGACAGCCCGCCTTGATGGAAAGAAAGGCACGCATTAACTTTAGTACAAAACAATAGTGGTTGCATGACCCTTCATTTCTTTAGCTATCATCTTCATCAATAAGCGGAAGAAACTGTCTACAACTGATAAAATGTGATTCCCAATGAAATTTTATGCAGTGATGGGAAAAACCATCATGTCAAAGTTAAGTTTGACAAGTAAATTGCTTTACGTTTTTAACTTACTTTTTTTGTACATTGTTCCTCATCTACAAAAATGTCATCTTTCTGATACGGTCAACATGTTAATCTTTGTTGCAGGGGGTGGGTATTGGGTTGTTAATATTCTCTTGAATTGTTTGAAGAGTCTCATTGTTGGTTCTAATGAATTTATATTCTCCATCCCTTGTTCATCGTTTGTTCAGGTTACTTTTTAAGAATTCAAGTTCAGCTATGGAGTGGGCACAGAGGAATAAATATTTCCACCTTCTTTCTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGCTTTTCACCTATTCCCTCATACGTTATAAATTATGCTCTTGCTGCAACCAAAGTTGGGTTCTTCCTTGATTTTCTACTGCCAACTGTAATTGGATGCATGCCAATGATACTTCAGAACACATCGATTGGCAGTCTTGCTGGTGCTGCAGTTGCTTCAGCGTCGGGATCTCAGAAATCTCAGATATGGTCATACATTTTCCCAGTACTTGGTATCGGATCAAGCATTCTAATTTCGTGGAGGATTAAAAAGTACTCTAGTGGACTCAAAGTGGCGGGAAGTTCTTCTAGTGATGAAGGGAATGACAATGTTGACCCATCCAAAACCAAGGAGTTTAAGAAAACTCGATAATCTTTAGCGATAGACAGATAAAGTTAAAACTTTTAGAAAATATACTTTCATTCATGCGTAGTTTTTCTGTTCTTTCTTGAGAAATTATTAGATTTATGGCATATTCTCCTCGTGATTAACCCAAGTGTAGAACATATTAAAGTCTTCATTTGAATCTTAATCACGAACTGAGAGACAGCTACTGAGATGGCATATGCAAGGAGATGGGCTCTAATACATTACTTACATGGTGCAAAACACTGGAGTCTATGCATGGAGATTTTCTAGAGAGCATTTTTTACACAAGCCTAGATAAACAGACTCAATTATACCATAAGCCTAAACTTCACTATTTTCCTTAGATTGGCCAATTGAACTACTATTTTACACAAAAATCTAGCTCCATTTACCATTTTAACTATCATTTTGTTTCAATCTGAAAAGTGTTCCCTTATCAACAAAAGCAAGAATCGGTAAGAAGATTCTGAAAATCAAAACAAATTATGTTTGATGTATAC

mRNA sequence

ATGGGAGCTGCTTGGGGACGGTGGTCCAAATTAGCCGCTATAGTGGCGGTGGTGGCCATTCTTAGACAATTAGGGAAGACATACGGATGGGAATTTGATAGAGATGCGGCTCTCAAGGTTTTCACCCAATGGTCTGATCGATTGGGGGTATGGGCCATGCCTGCCTATGTCGGCATCCATACCTTCACACTTGCTCTCTGTTTGCCTTATGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTTTTCGGTTTCTTCCCTGCCGTCATTTGCGTTTTCTTTGCCAAGGTCCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTACTTTTTAAGAATTCAAGTTCAGCTATGGAGTGGGCACAGAGGAATAAATATTTCCACCTTCTTTCTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGCTTTTCACCTATTCCCTCATACGTTATAAATTATGCTCTTGCTGCAACCAAAGTTGGGTTCTTCCTTGATTTTCTACTGCCAACTGTAATTGGATGCATGCCAATGATACTTCAGAACACATCGATTGGCAGTCTTGCTGGTGCTGCAGTTGCTTCAGCGTCGGGATCTCAGAAATCTCAGATATGGTCATACATTTTCCCAGTACTTGGTATCGGATCAAGCATTCTAATTTCGTGGAGGATTAAAAAGTACTCTAGTGGACTCAAAGTGGCGGGAAGTTCTTCTAGTGATGAAGGGAATGACAATGTTGACCCATCCAAAACCAAGGAGTTTAAGAAAACTCGATAA

Coding sequence (CDS)

ATGGGAGCTGCTTGGGGACGGTGGTCCAAATTAGCCGCTATAGTGGCGGTGGTGGCCATTCTTAGACAATTAGGGAAGACATACGGATGGGAATTTGATAGAGATGCGGCTCTCAAGGTTTTCACCCAATGGTCTGATCGATTGGGGGTATGGGCCATGCCTGCCTATGTCGGCATCCATACCTTCACACTTGCTCTCTGTTTGCCTTATGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTTTTCGGTTTCTTCCCTGCCGTCATTTGCGTTTTCTTTGCCAAGGTCCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTACTTTTTAAGAATTCAAGTTCAGCTATGGAGTGGGCACAGAGGAATAAATATTTCCACCTTCTTTCTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGCTTTTCACCTATTCCCTCATACGTTATAAATTATGCTCTTGCTGCAACCAAAGTTGGGTTCTTCCTTGATTTTCTACTGCCAACTGTAATTGGATGCATGCCAATGATACTTCAGAACACATCGATTGGCAGTCTTGCTGGTGCTGCAGTTGCTTCAGCGTCGGGATCTCAGAAATCTCAGATATGGTCATACATTTTCCCAGTACTTGGTATCGGATCAAGCATTCTAATTTCGTGGAGGATTAAAAAGTACTCTAGTGGACTCAAAGTGGCGGGAAGTTCTTCTAGTGATGAAGGGAATGACAATGTTGACCCATCCAAAACCAAGGAGTTTAAGAAAACTCGATAA

Protein sequence

MGAAWGRWSKLAAIVAVVAILRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSSSDEGNDNVDPSKTKEFKKTR

Homology

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BLAST of CsaV3_3G043490 vs. NCBI nr
Match: XP_004141157.1 (PREDICTED: uncharacterized protein LOC101209858 [Cucumis sativus] >KGN59784.1 hypothetical protein Csa_3G845510 [Cucumis sativus])

HSP 1 Score: 490.7 bits (1262), Expect = 3.0e-135
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60
           MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH
Sbjct: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240

Query: 241 SDEGNDNVDPSKTKEFKKTR 261
           SDEGNDNVDPSKTKEFKKTR
Sbjct: 241 SDEGNDNVDPSKTKEFKKTR 260

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BLAST of CsaV3_3G043490 vs. NCBI nr
Match: XP_008465163.1 (PREDICTED: uncharacterized protein LOC103502831 [Cucumis melo])

HSP 1 Score: 469.9 bits (1208), Expect = 5.5e-129
Identity = 238/260 (91.54%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60
           M  AWGRWS           LR+LGK YGWEFDR+AALKVFTQWSDRLGVWAMPAYVGIH
Sbjct: 1   MAPAWGRWSKLAALVAAVAILRELGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFTNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240
           ILQNTSIGSLAGAAVASASGS KSQIWSYIFPVLGIGSSILISWRIKKYSSGLK+ GSSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSHKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKMTGSSS 240

Query: 241 SDEGNDNVDPSKTKEFKKTR 261
           SDEGNDNVDPSKTKEFKKT+
Sbjct: 241 SDEGNDNVDPSKTKEFKKTQ 260

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BLAST of CsaV3_3G043490 vs. NCBI nr
Match: XP_023520742.1 (uncharacterized protein LOC111784193 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 448.0 bits (1151), Expect = 2.2e-122
Identity = 231/260 (88.85%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60
           MGA WGRW            LR LGK YGWE DR+AALKVF QWSDRLGVWAMPAYVGIH
Sbjct: 1   MGAGWGRWFKLAAVVAVVAILRALGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGLK+A SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 SDEGNDNVDPSKTKEFKKTR 261
           S E +D+V+PSK KEFKKT+
Sbjct: 241 SVERSDSVEPSKAKEFKKTQ 260

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BLAST of CsaV3_3G043490 vs. NCBI nr
Match: XP_022934149.1 (uncharacterized protein LOC111441406 [Cucurbita moschata])

HSP 1 Score: 447.2 bits (1149), Expect = 3.8e-122
Identity = 240/260 (92.31%), Postives = 248/260 (95.38%), Query Frame = 0


Query: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60
           MGA WGRW XXXXXXXXXXX R+LGK YGWE DR+AALKVF QWSDRLGVWAMPAYVG+H
Sbjct: 1   MGAGWGRWXXXXXXXXXXXXXRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGLK+A SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 SDEGNDNVDPSKTKEFKKTR 261
           S E +D+V+PSK KEFKKT+
Sbjct: 241 SVERSDSVEPSKAKEFKKTQ 260

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BLAST of CsaV3_3G043490 vs. NCBI nr
Match: XP_023521094.1 (uncharacterized protein LOC111784712 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 440.7 bits (1132), Expect = 3.6e-120
Identity = 229/260 (88.08%), Postives = 234/260 (90.00%), Query Frame = 0


Query: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60
           MGA WGRW            LR+LGK YGWE DR+AALKVF QWSDRLGVWAMPAYVGIH
Sbjct: 1   MGAGWGRWFKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGLK+A SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 SDEGNDNVDPSKTKEFKKTR 261
           S      V+PSK KEFKKT+
Sbjct: 241 S------VEPSKAKEFKKTQ 254

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BLAST of CsaV3_3G043490 vs. TAIR10
Match: AT1G44960.1 (SNARE associated Golgi protein family)

HSP 1 Score: 310.5 bits (794), Expect = 1.0e-84
Identity = 157/233 (67.38%), Postives = 189/233 (81.12%), Query Frame = 0


Query: 21  LRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASL 80
           +RQ    YGW  +++AAL+   +WSDRLG+WA+P YV +HT TLALCLP+AVFFEA AS+
Sbjct: 18  VRQGTTQYGW--NKEAALEKLKEWSDRLGIWAIPTYVAVHTITLALCLPHAVFFEAGASM 77

Query: 81  LFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKF 140
           LFGF PA++CVF AKVL AS SFWIGR +FK+S+ A  WA  NKYF++LSRGVE+DGWKF
Sbjct: 78  LFGFLPALLCVFSAKVLAASFSFWIGRFVFKSSTRATGWAHSNKYFNILSRGVERDGWKF 137

Query: 141 VLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASG 200
           VLLARFSPIPSYVINYALAAT+V F  DFL PTVIGC+PMILQN S+GSLAG AVAS +G
Sbjct: 138 VLLARFSPIPSYVINYALAATEVRFVADFLFPTVIGCLPMILQNASVGSLAGMAVASVAG 197

Query: 201 SQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSSSDEGNDNVDPSKT 254
            QKSQ+W Y+FPVLGI SS+LIS RIKKYS+G+  A SS +   N ++  S+T
Sbjct: 198 KQKSQVWGYVFPVLGILSSVLISLRIKKYSAGITEA-SSDTSANNSSLASSET 247

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BLAST of CsaV3_3G043490 vs. TAIR10
Match: AT1G03260.1 (SNARE associated Golgi protein family)

HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 52/219 (23.74%), Postives = 95/219 (43.38%), Query Frame = 0


Query: 38  LKVFTQW-SDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKV 97
           LK F  W  + LG +  P  + +    L +    A         LFG     +       
Sbjct: 36  LKDFLLWIKEDLGPFG-PLALALAYIPLTIVAVPASVLTLGGGYLFGLPVGFVADSLGAT 95

Query: 98  LGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFSPI-PSYVIN 157
           LGA+ +F +GR + K  S      +    F  +S  +++ G+K VLL R  PI P  ++N
Sbjct: 96  LGATAAFLLGRTIGK--SYVTSKIKHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFNMLN 155

Query: 158 YALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLG 217
           Y L+ T V    +++L T +G MP+      +G+          G  +  ++ ++  ++G
Sbjct: 156 YLLSVTPVRLG-EYMLATWLGMMPITFALVYVGTTLKDLSDITHGWHEVSVFRWVIMMVG 215

Query: 218 IGSSILI---SWRIKKYSSGLKVAGSSSSDEGNDNVDPS 252
           +  ++++     R+ K S    +A + +  +G  N D S
Sbjct: 216 VALAVILIICITRVAKSSLDKALAENGTELDGKKNDDAS 250

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BLAST of CsaV3_3G043490 vs. TAIR10
Match: AT1G22850.1 (SNARE associated Golgi protein family)

HSP 1 Score: 43.1 bits (100), Expect = 3.0e-04
Identity = 42/176 (23.86%), Postives = 79/176 (44.89%), Query Frame = 0


Query: 25  GKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGF 84
           G  Y +    +  L  F+ + +  G      ++ ++     L +P A+    +A LLFG 
Sbjct: 125 GVGYVYRDQINTFLTQFSTYIEGYGTAGYALFIAVYAGLEILAIP-ALPLTMSAGLLFGP 184

Query: 85  FPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLA 144
               I V  +  + AS++F I R   +     ++  + NK F  + + + ++G++ V L 
Sbjct: 185 LIGTIIVSISGTMAASVAFLIARYFAR--ERILKLVEDNKKFLAIDKAIGENGFRVVTLL 244

Query: 145 RFSP-IPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASAS 200
           R SP +P  + NY    T V  F+ ++L + +G +P      S G+   A +   S
Sbjct: 245 RLSPLLPFSLGNYLYGLTSVK-FVPYVLGSWLGMLPGSWAYVSAGAFGRAIIQEES 296

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BLAST of CsaV3_3G043490 vs. TrEMBL
Match: tr|A0A0A0LFP4|A0A0A0LFP4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 2.0e-135
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60
           MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH
Sbjct: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240

Query: 241 SDEGNDNVDPSKTKEFKKTR 261
           SDEGNDNVDPSKTKEFKKTR
Sbjct: 241 SDEGNDNVDPSKTKEFKKTR 260

[Close]

BLAST of CsaV3_3G043490 vs. TrEMBL
Match: tr|A0A1S3CN62|A0A1S3CN62_CUCME (uncharacterized protein LOC103502831 OS=Cucumis melo OX=3656 GN=LOC103502831 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 3.6e-129
Identity = 238/260 (91.54%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60
           M  AWGRWS           LR+LGK YGWEFDR+AALKVFTQWSDRLGVWAMPAYVGIH
Sbjct: 1   MAPAWGRWSKLAALVAAVAILRELGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFTNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240
           ILQNTSIGSLAGAAVASASGS KSQIWSYIFPVLGIGSSILISWRIKKYSSGLK+ GSSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSHKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKMTGSSS 240

Query: 241 SDEGNDNVDPSKTKEFKKTR 261
           SDEGNDNVDPSKTKEFKKT+
Sbjct: 241 SDEGNDNVDPSKTKEFKKTQ 260

[Close]

BLAST of CsaV3_3G043490 vs. TrEMBL
Match: tr|A0A2C9VBN2|A0A2C9VBN2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G172600 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.5e-95
Identity = 182/234 (77.78%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 22  RQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLL 81
           R+L K  GW  D+DAAL+VF +WSDRLGVWAMP YVGIHT +LALCLPY+VFFEA ASLL
Sbjct: 18  RELSKQLGW--DKDAALQVFAEWSDRLGVWAMPVYVGIHTVSLALCLPYSVFFEAGASLL 77

Query: 82  FGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFV 141
           FGFFPAV+CVF AKV GASLSFWIGRL+F++SSSAMEWAQRNK FHLLSRGVE+DGW+FV
Sbjct: 78  FGFFPAVLCVFSAKVFGASLSFWIGRLVFRSSSSAMEWAQRNKIFHLLSRGVERDGWRFV 137

Query: 142 LLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGS 201
           LLARFSP+PSYVINYALAATKVGF +DFLLPTVIGC+PMILQNTSIGSLAGAAVAS SGS
Sbjct: 138 LLARFSPMPSYVINYALAATKVGFLVDFLLPTVIGCLPMILQNTSIGSLAGAAVASTSGS 197

Query: 202 QKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSSSDEGND--NVDPSKT 254
           QKSQ+WSYIFP+LGI SS+LIS RI+KYS+ +    SS S+  +D  +VD S+T
Sbjct: 198 QKSQVWSYIFPILGIVSSVLISLRIRKYSNDITTVASSPSNHASDCNDVDSSQT 249

[Close]

BLAST of CsaV3_3G043490 vs. TrEMBL
Match: tr|B9GMW6|B9GMW6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G070800v3 PE=4 SV=2)

HSP 1 Score: 355.5 bits (911), Expect = 1.0e-94
Identity = 179/237 (75.53%), Postives = 205/237 (86.50%), Query Frame = 0


Query: 6   GRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIHTFTLA 65
           G+W             R+L K +GW  D+DAAL++  +WSDRLGVWAMP YVGIHT +LA
Sbjct: 2   GKWLKVAAVIGLIAIARELSKQFGW--DKDAALELLGEWSDRLGVWAMPVYVGIHTISLA 61

Query: 66  LCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKY 125
           LCLP AVFFEA ASLLFGF PAV+CVFFAKVLGASLSFWIGRL+F++SSSAMEW Q NKY
Sbjct: 62  LCLPCAVFFEAGASLLFGFLPAVLCVFFAKVLGASLSFWIGRLVFRSSSSAMEWVQSNKY 121

Query: 126 FHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNT 185
           FHLLSRGVE+DGWKFVLLARFSP+PSY+INYALAATKVGF +DFLLPTV+GC+PMILQNT
Sbjct: 122 FHLLSRGVEKDGWKFVLLARFSPMPSYLINYALAATKVGFMVDFLLPTVVGCLPMILQNT 181

Query: 186 SIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSSSD 243
           SIGSLAGAAVASASGS+KSQIWSY+FP+LGI SSILIS RIKKYS+ + +A SS++D
Sbjct: 182 SIGSLAGAAVASASGSKKSQIWSYLFPLLGIVSSILISLRIKKYSTDITLAESSTND 236

[Close]

BLAST of CsaV3_3G043490 vs. TrEMBL
Match: tr|B9RG32|B9RG32_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1438890 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.4e-93
Identity = 178/234 (76.07%), Postives = 204/234 (87.18%), Query Frame = 0


Query: 22  RQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLL 81
           R+L K  GW  D++AALKVF +WSD LG+WAMP YVGIHT TLALCLPYAVFFEA A LL
Sbjct: 19  RELIKQTGW--DKEAALKVFAEWSDGLGIWAMPIYVGIHTLTLALCLPYAVFFEAAAPLL 78

Query: 82  FGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFV 141
           FGF PAV+CVF AK+LGASLSFWIGRL+F++SSSAMEWAQRNKYFHLLS+GVEQDGW+FV
Sbjct: 79  FGFMPAVLCVFSAKLLGASLSFWIGRLVFRSSSSAMEWAQRNKYFHLLSKGVEQDGWRFV 138

Query: 142 LLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGS 201
           LLARFSP+PSYVINYALAATKV F +DFLLPT+IGC+PMILQNTSIGSLAGAAVAS SGS
Sbjct: 139 LLARFSPMPSYVINYALAATKVEFLVDFLLPTIIGCLPMILQNTSIGSLAGAAVASTSGS 198

Query: 202 QKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSSSDEGNDNVDPSKTKE 256
           QKS++WSY+FP+LGI SSILIS RIKKYSS + +  SS S+   D+ D   +K+
Sbjct: 199 QKSKVWSYLFPLLGIISSILISMRIKKYSSDITMVESSPSNHTTDSNDVDSSKD 250

The following BLAST results are available for this feature:

BLAST of CsaV3_3G043490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141157.1	3.0e-135	100.00	PREDICTED: uncharacterized protein LOC101209858 [Cucumis sativus] >KGN59784.1 hy...	[more]
XP_008465163.1	5.5e-129	91.54	PREDICTED: uncharacterized protein LOC103502831 [Cucumis melo]	[more]
XP_023520742.1	2.2e-122	88.85	uncharacterized protein LOC111784193 [Cucurbita pepo subsp. pepo]	[more]
XP_022934149.1	3.8e-122	92.31	uncharacterized protein LOC111441406 [Cucurbita moschata]	[more]
XP_023521094.1	3.6e-120	88.08	uncharacterized protein LOC111784712 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G043490 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G44960.1	1.0e-84	67.38	SNARE associated Golgi protein family	[more]
AT1G03260.1	1.4e-04	23.74	SNARE associated Golgi protein family	[more]
AT1G22850.1	3.0e-04	23.86	SNARE associated Golgi protein family	[more]

BLAST of CsaV3_3G043490 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G043490 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LFP4\|A0A0A0LFP4_CUCSA	2.0e-135	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1	[more]
tr\|A0A1S3CN62\|A0A1S3CN62_CUCME	3.6e-129	91.54	uncharacterized protein LOC103502831 OS=Cucumis melo OX=3656 GN=LOC103502831 PE=...	[more]
tr\|A0A2C9VBN2\|A0A2C9VBN2_MANES	1.5e-95	77.78	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G172600 PE=4 SV=...	[more]
tr\|B9GMW6\|B9GMW6_POPTR	1.0e-94	75.53	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G070800v3 PE=...	[more]
tr\|B9RG32\|B9RG32_RICCO	1.4e-93	76.07	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1438890 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR015414	TMEM64
IPR032816	SNARE_assoc

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G043490.1	CsaV3_3G043490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032816	SNARE associated Golgi protein	PFAM	PF09335	SNARE_assoc	coord: 68..189 e-value: 5.7E-21 score: 75.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..260
None	No IPR available	PANTHER	PTHR12677:SF2	SUBFAMILY NOT NAMED	coord: 7..255
IPR015414	Transmembrane protein TMEM64	PANTHER	PTHR12677	UNCHARACTERIZED	coord: 7..255

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G043490	CSPI03G41020	Wild cucumber (PI 183967)	cpicucB145
CsaV3_3G043490	Cucsa.340770	Cucumber (Gy14) v1	cgycucB523
CsaV3_3G043490	CmaCh14G010650	Cucurbita maxima (Rimu)	cmacucB0293
CsaV3_3G043490	CmaCh06G017500	Cucurbita maxima (Rimu)	cmacucB0968
CsaV3_3G043490	CmoCh06G017370	Cucurbita moschata (Rifu)	cmocucB0956
CsaV3_3G043490	CmoCh14G010840	Cucurbita moschata (Rifu)	cmocucB0287
CsaV3_3G043490	Cp4.1LG08g06630	Cucurbita pepo (Zucchini)	cpecucB1061
CsaV3_3G043490	CsGy3G038500	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G043490	Carg23323	Silver-seed gourd	carcucB0305
CsaV3_3G043490	Carg11275	Silver-seed gourd	carcucB0855
CsaV3_3G043490	Cla017197	Watermelon (97103) v1	cucwmB208
CsaV3_3G043490	MELO3C026753	Melon (DHL92) v3.5.1	cucmeB218
CsaV3_3G043490	ClCG10G013090	Watermelon (Charleston Gray)	cucwcgB199
CsaV3_3G043490	Lsi03G012710	Bottle gourd (USVL1VR-Ls)	cuclsiB203
CsaV3_3G043490	MELO3C026753.2	Melon (DHL92) v3.6.1	cucmedB211
CsaV3_3G043490	Cla97C10G195950	Watermelon (97103) v2	cucwmbB187
CsaV3_3G043490	Bhi11G001270	Wax gourd	cucwgoB241

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None