CmoCh06G017370 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G017370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TVP38/TMEM64 family membrane protein
Location	Cmo_Chr06 : 11909165 .. 11912739 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTAGTCTCCGCCCTGAACGGTTTTTAACCGGAATCAAATCTCCAGGAAGATGGGATCTGGGTGGGGACGGTGGTTCAAATTAGCCGCCGTAGTGGCGGTGCTGGCGATTTTGAGAGAGTTAGGGAAGCGATACGGATGGGAAATTGACAGAGAAGCGGCTCTCAAGGTGTTCGACCAATGGTCCGATCGATTGGGGATATGGGCCATGCCTGCGTATGTCGGCATCCATACCTTCACACTTGCTCTCTGTTTGCCCTACGCCGTATTCTTTGAGGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCCGCCGTGATTTGCGTTTTCTGTGCCAAGGTGCTTGGGGCTTCCCTTTCCTTCTGGATCGGCAGGTTTGTTCTAACATTTCCTTTTTCTTGTCTGATTTCCTCTTATTCAATACTGAGATTATGCAAGGCTTCCGACGTTTTGTGATGTGAAATTGTGTGTTCATGGTATGGAATTAAGTTCGGAATTTTGTTGCTGTAGTTTTAGATATGTTTGTTGATTGGGGATTTTATATGTCTTATCTTACAATTTTACGTTGGATTCCCTGAAATGGATTATTTTTCCCTGATGCTGTATTTGAGGATAGAAGTTGATTGGCGTTTTTAGTCTATATAGAAAGTGAAAGGATTGAAGTTTTGTTGAATTTCTTGTGTTCCACATTGTTGAGAGAATAGCTGGTGCTTACTATTTGTTGTAAGCTGTTCTGTTTGGTAAATAATGAAGGTAGAAAGCTTGTGTATGATTCGGGCTGTGGCGTGGTAGGGGAAATCATATGCCACGACTTTATAGTTTTTATATTATTTTGAAACAGAAACAGAAACTTTTCATTAGTATAGTTTTTTTTTATGAGAATTCTACTCTGTATTGACTAAACAAACTGTACAAAAGTGGATAAAGTGCACCAATTAGAGAATAAGTATATAACTAGGCCCCTCAAGTCACATCTTTAAACACCCTTTAATTTCTTTAAAACCACAACCTCCAAGGTAACTCATGATAGCATTATACAAAGAATCTTTGCTTGATCTAGGAAGGGAAGACTCACCCTAATACAAACCACATTATCCAACCTCCCCACTTAATGCATTTCTCTATTCGAAATGCTACAAAAAGTGACTTCGGATATAGAAAGATTATTTAGAAACTATTTGTGGAAAGATGGCTGACACCTTGTTCGATGAAATTTTATGAACCTCTCAATAGAAAAGGGAGGCCTCGGTCTTTTCTCGATAAAGAAGAGGAACAACACTCTCCTCGCAAAATGGATATTGAGATATCATCATCAAGAAAATGTCTTACGGAGAAATCTTATAAAGGCTAAATATACTCATATATCAGTCAAAAATCAACCCTTCCATCATCTGCAAAAGGGCCTTGGAAGTACGTAAAGGAACATTAAAACCTCATTGGTGAGTGATGAGGAAGCACATCATTTTGGACCGACCCATGGATTGAAAACCCCATGCTAGTCTTGCCGTATCCACTTTTGTACAGGCTCTCTCATAGCAAAAAAGCCACGATCAAAGAAACATGGATTGTTGTTAACGAATTTTGGGACTTGAACTGTGGTAAGAATTTAAAGGATATGAAGCAACGGAATGGGCCGAATTAAGCCTTGAACTTGCTCCAGTGGTATTGTCAAACGAAGCAGACTTACTCACTTAGCTCCCTAGCGCTGACGGGGTCTTCTCTACAAAATCCTTGATGATGGACATGGGGGAAAGTAGAAGCAATAAATCTCACGTTAGCAAAGACAATACGAAGGACATCACCCTAAATAGGTGAAAATTTTCCTTTGGGAAATAGCACATAAAGCCCAATTAGCACAAGCAAAAATCTTCAAAAAAGAATGTCTTACATTTACTCTTCCTCCATATTGGTGTCCATTAAGGAAAGAAAATGGATCACAAAGCCACTTATTTATGCAATGCACAAACGCTCAGAATTTTTGGACAACGATTCTTAACGTATTCGGATGACATCTCACATTTCCTAGGGAGGTAAAGGATCTATTGGACATGGCCTTAATGTACCACTCATCCAAGAATGCAAAAGCCCTATTATGGAAAAACCTTTCTTTTGGAACATGTGGAAAGAAAAAAACACAAACTTATACAGAACTCTTCGACAATATTGTTTACCAAACTATATCTTGGTGTAAGCTGTCTAATATTTTTACTTCCTATAGTTATACCTCCCTCATTTTACTACCTCCCTCATTTTAGAGGAGTACCCATGGAGGTTAAATTGATTAAATAACTTCCCCCAACTTGTAGCTTCAAAGGAGCCATGAAAGTAGAGGCGAGTCTAGTCATCTAATGATATTTTATGAAAGGAGCACAAACTTATGGACAAAATATAGTGAGGAAACATTTTCCACTCTTTGTTGCTAGTGTCCAACCGATCTTGGAATTTTAGACTTCCAAATAGCCTTGTCCAGCAGCTACCAAGGATTCGTTTCCTTTGAAAGAGACCTAAAAACACGGATTTTAGAGGCAGGGGAACCACTGATCTTTGAAAAGACAGGACTCCCTCCATTGATGAGCTTTTCTGTGGCGAGCTTCCTTGAATGGATGCTGAAGAGCAGTGAATTCCTTACCTGCAAGTTGGTGCTTATATCCGACCCACCTTGAGGGGAAAAAAAGGCACTCTTTTTCAAGTTTAGCAGAAAACAGAGGAATTTTATGATGTGATGAAAAAATATGAGTTGGAAGGCAGTTTGAGAAGTGCATTGCTTTATATACTTAATTTATAAGTTGTTGCCCCATCTAGAAACATGTCCTGAAATGTTTGAAGTGTCTGGTGTTATGAATTTCTATTATCCAACATCTCAATCCAAGGTCATGTTTTGTTCAGGTTACTTTTTAGGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAATAAATACTTCCATCTTCTTTGTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGATTTTCACCAATTCCCTCATACGTTATAAATTATGCTCTTGCAGCAACCAAAGTGGGGTTCTTTTTAGATTTTCTGGTGCCAACTGTGATGGGATGCTTGCCAATGATACTTCAGAATACGTCAATTGGCAGTCTCGCTGGTGCTGCAGTTGCTTCAGCCTCTGGGTCTCAGAAATCTCAGATATGGTCGTACATTTTTCCTGTACTTGGTATTGGATCCAGCATTCTTATTTCCTGGAGGATTAAAAAGTACTCTACTGGACTCGCAGTGCCTGAAAGTTCCTCTACTGTTGACCCATCTAAAACCAAAGTACTGTAGTCATACCTTTTCTTTTCTTTCTTAAGAGATTATTAGATTGATGCCACATTTTCGGCTTTTGATTTATGAGTCCCGGAGGTTTTATTATAATCTTCATCAGTGATACAACACAAGACATAATCTCCAAGTTGAGAGGGAGCAAAGAAAAATGTTTAGTGCAAATCTCTCGTCCTTTCGACCTTTCTTTCTACCTCTGTTTCTTTTCCACTCGTATTGTTGTTTAGAGTGCCGAGGAAAGGGAACTAAGCATGAACAAATC

mRNA sequence

TGGTAGTCTCCGCCCTGAACGGTTTTTAACCGGAATCAAATCTCCAGGAAGATGGGATCTGGGTGGGGACGGTGGTTCAAATTAGCCGCCGTAGTGGCGGTGCTGGCGATTTTGAGAGAGTTAGGGAAGCGATACGGATGGGAAATTGACAGAGAAGCGGCTCTCAAGGTGTTCGACCAATGGTCCGATCGATTGGGGATATGGGCCATGCCTGCGTATGTCGGCATCCATACCTTCACACTTGCTCTCTGTTTGCCCTACGCCGTATTCTTTGAGGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCCGCCGTGATTTGCGTTTTCTGTGCCAAGGTGCTTGGGGCTTCCCTTTCCTTCTGGATCGGCAGGTTACTTTTTAGGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAATAAATACTTCCATCTTCTTTGTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGATTTTCACCAATTCCCTCATACGTTATAAATTATGCTCTTGCAGCAACCAAAGTGGGGTTCTTTTTAGATTTTCTGGTGCCAACTGTGATGGGATGCTTGCCAATGATACTTCAGAATACGTCAATTGGCAGTCTCGCTGGTGCTGCAGTTGCTTCAGCCTCTGGGTCTCAGAAATCTCAGATATGGTCGTACATTTTTCCTGTACTTGGTATTGGATCCAGCATTCTTATTTCCTGGAGGATTAAAAAGTACTCTACTGGACTCGCAGTGCCTGAAAGTTCCTCTACTGTTGACCCATCTAAAACCAAAGTACTGTAGTCATACCTTTTCTTTTCTTTCTTAAGAGATTATTAGATTGATGCCACATTTTCGGCTTTTGATTTATGAGTCCCGGAGGTTTTATTATAATCTTCATCAGTGATACAACACAAGACATAATCTCCAAGTTGAGAGGGAGCAAAGAAAAATGTTTAGTGCAAATCTCTCGTCCTTTCGACCTTTCTTTCTACCTCTGTTTCTTTTCCACTCGTATTGTTGTTTAGAGTGCCGAGGAAAGGGAACTAAGCATGAACAAATC

Coding sequence (CDS)

ATGGGATCTGGGTGGGGACGGTGGTTCAAATTAGCCGCCGTAGTGGCGGTGCTGGCGATTTTGAGAGAGTTAGGGAAGCGATACGGATGGGAAATTGACAGAGAAGCGGCTCTCAAGGTGTTCGACCAATGGTCCGATCGATTGGGGATATGGGCCATGCCTGCGTATGTCGGCATCCATACCTTCACACTTGCTCTCTGTTTGCCCTACGCCGTATTCTTTGAGGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCCGCCGTGATTTGCGTTTTCTGTGCCAAGGTGCTTGGGGCTTCCCTTTCCTTCTGGATCGGCAGGTTACTTTTTAGGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAATAAATACTTCCATCTTCTTTGTAGAGGAGTAGAGCAAGATGGTTGGAAATTTGTCCTTCTTGCTCGATTTTCACCAATTCCCTCATACGTTATAAATTATGCTCTTGCAGCAACCAAAGTGGGGTTCTTTTTAGATTTTCTGGTGCCAACTGTGATGGGATGCTTGCCAATGATACTTCAGAATACGTCAATTGGCAGTCTCGCTGGTGCTGCAGTTGCTTCAGCCTCTGGGTCTCAGAAATCTCAGATATGGTCGTACATTTTTCCTGTACTTGGTATTGGATCCAGCATTCTTATTTCCTGGAGGATTAAAAAGTACTCTACTGGACTCGCAGTGCCTGAAAGTTCCTCTACTGTTGACCCATCTAAAACCAAAGTACTGTAG

Homology

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BLAST of CmoCh06G017370 vs. Swiss-Prot
Match: Y305_SYNY3 (TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.1e-11
Identity = 55/192 (28.65%), Postives = 96/192 (50.00%), Query Frame = 1


Query: 43  QWSDRLGIWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLS 102
           QW D LG WA  A++ ++T    + LP ++     A ++FG     I VF    LGA+ +
Sbjct: 10  QWIDGLGTWAAIAFMLLYTVATVVFLPGSIL-TLGAGVVFGVILGSIYVFIGATLGATAA 69

Query: 103 FWIGRLLFRNSSSAMEWAQR----NKYFHLLCRGVEQDGWKFVLLARFSPI-PSYVINYA 162
           F +GR L R       W  +    N+ F  +   V ++G K V+L R SP+ P  ++NYA
Sbjct: 70  FLVGRYLARG------WVAKKIAGNQKFKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYA 129

Query: 163 LAATKVGFFLDFLVPTVMGCLPMILQNTSIGSLAGA-AVASASGSQKSQIWSYIFPVLGI 222
              T V    D+++ + +G +P  +    IGSLAG+ A    + +Q +    +   ++G 
Sbjct: 130 YGITNVS-LKDYVIGS-LGMIPGTIMYVYIGSLAGSLATLGTATNQANPTLQWTIRIVGF 189

Query: 223 GSSILISWRIKK 229
            +++ ++  + K
Sbjct: 190 IATVAVTIYVTK 192

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BLAST of CmoCh06G017370 vs. TrEMBL
Match: A0A0A0LFP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G845510 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.5e-123
Identity = 226/254 (88.98%), Postives = 238/254 (93.70%), Query Frame = 1


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MG+ WGRW KLAA+VAV+AILR+LGK YGWE DR+AALKVF QWSDRLG+WAMPAYVGIH
Sbjct: 1   MGAAWGRWSKLAAIVAVVAILRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLL RGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFL+PTV+GC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYS+GL V  SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240

Query: 241 T------VDPSKTK 249
           +      VDPSKTK
Sbjct: 241 SDEGNDNVDPSKTK 254

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BLAST of CmoCh06G017370 vs. TrEMBL
Match: B9GMW6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s12660g PE=4 SV=2)

HSP 1 Score: 372.9 bits (956), Expect = 3.1e-100
Identity = 184/239 (76.99%), Postives = 213/239 (89.12%), Query Frame = 1


Query: 6   GRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFTLA 65
           G+W K+AAV+ ++AI REL K++GW  D++AAL++  +WSDRLG+WAMP YVGIHT +LA
Sbjct: 2   GKWLKVAAVIGLIAIARELSKQFGW--DKDAALELLGEWSDRLGVWAMPVYVGIHTISLA 61

Query: 66  LCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKY 125
           LCLP AVFFEA ASLLFGF PAV+CVF AKVLGASLSFWIGRL+FR+SSSAMEW Q NKY
Sbjct: 62  LCLPCAVFFEAGASLLFGFLPAVLCVFFAKVLGASLSFWIGRLVFRSSSSAMEWVQSNKY 121

Query: 126 FHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQNT 185
           FHLL RGVE+DGWKFVLLARFSP+PSY+INYALAATKVGF +DFL+PTV+GCLPMILQNT
Sbjct: 122 FHLLSRGVEKDGWKFVLLARFSPMPSYLINYALAATKVGFMVDFLLPTVVGCLPMILQNT 181

Query: 186 SIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSSTVDP 245
           SIGSLAGAAVASASGS+KSQIWSY+FP+LGI SSILIS RIKKYST + + ESS+   P
Sbjct: 182 SIGSLAGAAVASASGSKKSQIWSYLFPLLGIVSSILISLRIKKYSTDITLAESSTNDSP 238

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BLAST of CmoCh06G017370 vs. TrEMBL
Match: A0A067JHC4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23065 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 4.5e-99
Identity = 183/235 (77.87%), Postives = 207/235 (88.09%), Query Frame = 1


Query: 7   RWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFTLAL 66
           +W+K+AAVV +L I REL K  GW  D++AA  +  +WSDRLGIWAMP YVGIHT +LAL
Sbjct: 3   KWWKVAAVVGMLGIARELSKHLGW--DKDAAFHLLAEWSDRLGIWAMPVYVGIHTLSLAL 62

Query: 67  CLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKYF 126
           CLPYAVFFEA ASLLFGF PAV+CVF AKVLGASLSFWIGRL+FR+SSSAMEW QRNKYF
Sbjct: 63  CLPYAVFFEAGASLLFGFLPAVLCVFSAKVLGASLSFWIGRLVFRSSSSAMEWVQRNKYF 122

Query: 127 HLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQNTS 186
           HLLCRGVE+DGW+FVLLARFSP+PSYVINYALAATKVGF +DFL+PTV+GCLPMILQNTS
Sbjct: 123 HLLCRGVERDGWRFVLLARFSPMPSYVINYALAATKVGFIVDFLLPTVIGCLPMILQNTS 182

Query: 187 IGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSST 242
           IGSLAGAAVAS S SQKS +WSY+FP+LGI SSILIS RIKKYST +++  SS T
Sbjct: 183 IGSLAGAAVASTSASQKSMVWSYLFPMLGIVSSILISLRIKKYSTDISMVASSPT 235

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BLAST of CmoCh06G017370 vs. TrEMBL
Match: A0A067DVL6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025076mg PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 7.7e-99
Identity = 175/239 (73.22%), Postives = 209/239 (87.45%), Query Frame = 1


Query: 4   GWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFT 63
           G G+W K+  VV V+AI+RE+ K YG+  D++  +K   +WSDRLG+WA+P +VG HT T
Sbjct: 2   GMGKWLKIGMVVGVIAIIREVSKHYGFGFDKDTGIKAIREWSDRLGVWAIPVFVGFHTLT 61

Query: 64  LALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRN 123
           +ALCLPYAVFFEA ASLLFGFFPAV+CVF AK+LGASLSFWIGRL+F++S+SAMEWAQRN
Sbjct: 62  IALCLPYAVFFEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVFKSSNSAMEWAQRN 121

Query: 124 KYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQ 183
           KYFH+L RGVE+DGWKFV+LARFSP+PSYVINYALAAT VGF +DFL+PT++GCLPMILQ
Sbjct: 122 KYFHILSRGVEKDGWKFVVLARFSPMPSYVINYALAATNVGFVVDFLLPTIIGCLPMILQ 181

Query: 184 NTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSSTV 243
           NTSIGSLAGAAVASAS S KSQ+WSY+FP+LGI SSILIS+RIKKYST + V ES S +
Sbjct: 182 NTSIGSLAGAAVASASSSWKSQVWSYLFPLLGIVSSILISFRIKKYSTDITVAESPSDI 240

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BLAST of CmoCh06G017370 vs. TrEMBL
Match: V4SJ46_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029098mg PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.3e-98
Identity = 174/239 (72.80%), Postives = 208/239 (87.03%), Query Frame = 1


Query: 4   GWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFT 63
           G G+W K+  VV V+AI+RE+ K YG+  D++  +K   +WSDRLG+WA+P +VG HT T
Sbjct: 2   GMGKWLKIGMVVGVIAIIREVSKHYGFGFDKDTGIKAIREWSDRLGVWAIPVFVGFHTLT 61

Query: 64  LALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRN 123
           +ALCLPYAVFFEA ASLLFGFFPAV+CVF AK+LGASLSFWIGRL+F++S+SAMEWAQRN
Sbjct: 62  IALCLPYAVFFEAAASLLFGFFPAVLCVFSAKLLGASLSFWIGRLVFKSSNSAMEWAQRN 121

Query: 124 KYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQ 183
           KYFH+L RGVE+DGWKFV+LARFSP+PSYVINYALAAT VGF +DFL+PT++GCLPMILQ
Sbjct: 122 KYFHILSRGVEKDGWKFVVLARFSPMPSYVINYALAATNVGFVVDFLLPTIIGCLPMILQ 181

Query: 184 NTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSSTV 243
           NTSIGSLAGAAVAS S S KSQ+WSY+FP+LGI SSILIS+RIKKYST + V ES S +
Sbjct: 182 NTSIGSLAGAAVASTSSSWKSQVWSYLFPLLGIVSSILISFRIKKYSTDITVAESPSDI 240

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BLAST of CmoCh06G017370 vs. TAIR10
Match: AT1G44960.1 (AT1G44960.1 SNARE associated Golgi protein family)

HSP 1 Score: 321.2 bits (822), Expect = 5.5e-88
Identity = 159/240 (66.25%), Postives = 193/240 (80.42%), Query Frame = 1


Query: 7   RWFKLAAVVAVLAILRELGK-RYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFTLA 66
           +W  +AA VA++AI+   G  +YGW  ++EAAL+   +WSDRLGIWA+P YV +HT TLA
Sbjct: 3   KWLAIAATVAIIAIIVRQGTTQYGW--NKEAALEKLKEWSDRLGIWAIPTYVAVHTITLA 62

Query: 67  LCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKY 126
           LCLP+AVFFEA AS+LFGF PA++CVF AKVL AS SFWIGR +F++S+ A  WA  NKY
Sbjct: 63  LCLPHAVFFEAGASMLFGFLPALLCVFSAKVLAASFSFWIGRFVFKSSTRATGWAHSNKY 122

Query: 127 FHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQNT 186
           F++L RGVE+DGWKFVLLARFSPIPSYVINYALAAT+V F  DFL PTV+GCLPMILQN 
Sbjct: 123 FNILSRGVERDGWKFVLLARFSPIPSYVINYALAATEVRFVADFLFPTVIGCLPMILQNA 182

Query: 187 SIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSSTVDPS 246
           S+GSLAG AVAS +G QKSQ+W Y+FPVLGI SS+LIS RIKKYS G+    S ++ + S
Sbjct: 183 SVGSLAGMAVASVAGKQKSQVWGYVFPVLGILSSVLISLRIKKYSAGITEASSDTSANNS 240

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BLAST of CmoCh06G017370 vs. NCBI nr
Match: gi|449446797|ref|XP_004141157.1| (PREDICTED: uncharacterized protein LOC101209858 [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 5.0e-123
Identity = 226/254 (88.98%), Postives = 238/254 (93.70%), Query Frame = 1


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           MG+ WGRW KLAA+VAV+AILR+LGK YGWE DR+AALKVF QWSDRLG+WAMPAYVGIH
Sbjct: 1   MGAAWGRWSKLAAIVAVVAILRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF+NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLL RGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFL+PTV+GC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYS+GL V  SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240

Query: 241 T------VDPSKTK 249
           +      VDPSKTK
Sbjct: 241 SDEGNDNVDPSKTK 254

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BLAST of CmoCh06G017370 vs. NCBI nr
Match: gi|659130424|ref|XP_008465163.1| (PREDICTED: uncharacterized protein LOC103502831 [Cucumis melo])

HSP 1 Score: 444.5 bits (1142), Expect = 1.2e-121
Identity = 225/254 (88.58%), Postives = 234/254 (92.13%), Query Frame = 1


Query: 1   MGSGWGRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIH 60
           M   WGRW KLAA+VA +AILRELGKRYGWE DREAALKVF QWSDRLG+WAMPAYVGIH
Sbjct: 1   MAPAWGRWSKLAALVAAVAILRELGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLF NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFTNSSSAMEWA 120

Query: 121 QRNKYFHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPM 180
           QRNKYFHLL RGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFL+PTV+GC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSS 240
           ILQNTSIGSLAGAAVASASGS KSQIWSYIFPVLGIGSSILISWRIKKYS+GL +  SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSHKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKMTGSSS 240

Query: 241 T------VDPSKTK 249
           +      VDPSKTK
Sbjct: 241 SDEGNDNVDPSKTK 254

[Close]

BLAST of CmoCh06G017370 vs. NCBI nr
Match: gi|743920558|ref|XP_011004328.1| (PREDICTED: uncharacterized protein LOC105110851 [Populus euphratica])

HSP 1 Score: 373.2 bits (957), Expect = 3.5e-100
Identity = 184/239 (76.99%), Postives = 213/239 (89.12%), Query Frame = 1


Query: 6   GRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFTLA 65
           G+W+K+AAV+ ++AI REL K++GW  D++AAL++  +WSDRLG+WAMP YVGIHT TLA
Sbjct: 2   GKWWKVAAVIGLVAIARELSKQFGW--DKDAALELLGEWSDRLGVWAMPVYVGIHTITLA 61

Query: 66  LCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKY 125
           LCLP AVFFEA ASLLFGF PAV+CVF AKVLGASLSFWIGRL+FR+SSSAMEW Q NKY
Sbjct: 62  LCLPCAVFFEAGASLLFGFLPAVLCVFSAKVLGASLSFWIGRLVFRSSSSAMEWVQSNKY 121

Query: 126 FHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQNT 185
           FHLL RGVE+DGWKFVLLARFSP+PSYVINYALAATKVGF +DFL+PTV+GC PMILQNT
Sbjct: 122 FHLLSRGVERDGWKFVLLARFSPMPSYVINYALAATKVGFMVDFLLPTVVGCFPMILQNT 181

Query: 186 SIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSSTVDP 245
           SIGSLAGAAVASASGS+KSQ+WSY+FP+LGI SSILIS RIKKYST + + ESS+   P
Sbjct: 182 SIGSLAGAAVASASGSKKSQVWSYLFPLLGIVSSILISLRIKKYSTDITLAESSTGDSP 238

[Close]

BLAST of CmoCh06G017370 vs. NCBI nr
Match: gi|566148622|ref|XP_002297894.2| (hypothetical protein POPTR_0001s12660g [Populus trichocarpa])

HSP 1 Score: 372.9 bits (956), Expect = 4.5e-100
Identity = 184/239 (76.99%), Postives = 213/239 (89.12%), Query Frame = 1


Query: 6   GRWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFTLA 65
           G+W K+AAV+ ++AI REL K++GW  D++AAL++  +WSDRLG+WAMP YVGIHT +LA
Sbjct: 2   GKWLKVAAVIGLIAIARELSKQFGW--DKDAALELLGEWSDRLGVWAMPVYVGIHTISLA 61

Query: 66  LCLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKY 125
           LCLP AVFFEA ASLLFGF PAV+CVF AKVLGASLSFWIGRL+FR+SSSAMEW Q NKY
Sbjct: 62  LCLPCAVFFEAGASLLFGFLPAVLCVFFAKVLGASLSFWIGRLVFRSSSSAMEWVQSNKY 121

Query: 126 FHLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQNT 185
           FHLL RGVE+DGWKFVLLARFSP+PSY+INYALAATKVGF +DFL+PTV+GCLPMILQNT
Sbjct: 122 FHLLSRGVEKDGWKFVLLARFSPMPSYLINYALAATKVGFMVDFLLPTVVGCLPMILQNT 181

Query: 186 SIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSSTVDP 245
           SIGSLAGAAVASASGS+KSQIWSY+FP+LGI SSILIS RIKKYST + + ESS+   P
Sbjct: 182 SIGSLAGAAVASASGSKKSQIWSYLFPLLGIVSSILISLRIKKYSTDITLAESSTNDSP 238

[Close]

BLAST of CmoCh06G017370 vs. NCBI nr
Match: gi|802754261|ref|XP_012088675.1| (PREDICTED: uncharacterized protein LOC105647268 [Jatropha curcas])

HSP 1 Score: 369.0 bits (946), Expect = 6.5e-99
Identity = 183/235 (77.87%), Postives = 207/235 (88.09%), Query Frame = 1


Query: 7   RWFKLAAVVAVLAILRELGKRYGWEIDREAALKVFDQWSDRLGIWAMPAYVGIHTFTLAL 66
           +W+K+AAVV +L I REL K  GW  D++AA  +  +WSDRLGIWAMP YVGIHT +LAL
Sbjct: 3   KWWKVAAVVGMLGIARELSKHLGW--DKDAAFHLLAEWSDRLGIWAMPVYVGIHTLSLAL 62

Query: 67  CLPYAVFFEATASLLFGFFPAVICVFCAKVLGASLSFWIGRLLFRNSSSAMEWAQRNKYF 126
           CLPYAVFFEA ASLLFGF PAV+CVF AKVLGASLSFWIGRL+FR+SSSAMEW QRNKYF
Sbjct: 63  CLPYAVFFEAGASLLFGFLPAVLCVFSAKVLGASLSFWIGRLVFRSSSSAMEWVQRNKYF 122

Query: 127 HLLCRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLVPTVMGCLPMILQNTS 186
           HLLCRGVE+DGW+FVLLARFSP+PSYVINYALAATKVGF +DFL+PTV+GCLPMILQNTS
Sbjct: 123 HLLCRGVERDGWRFVLLARFSPMPSYVINYALAATKVGFIVDFLLPTVIGCLPMILQNTS 182

Query: 187 IGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSTGLAVPESSST 242
           IGSLAGAAVAS S SQKS +WSY+FP+LGI SSILIS RIKKYST +++  SS T
Sbjct: 183 IGSLAGAAVASTSASQKSMVWSYLFPMLGIVSSILISLRIKKYSTDISMVASSPT 235

The following BLAST results are available for this feature:

BLAST of CmoCh06G017370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y305_SYNY3	5.1e-11	28.65	TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 68...	[more]

BLAST of CmoCh06G017370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFP4_CUCSA	3.5e-123	88.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G845510 PE=4 SV=1	[more]
B9GMW6_POPTR	3.1e-100	76.99	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s12660g PE=4 SV=2	[more]
A0A067JHC4_JATCU	4.5e-99	77.87	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23065 PE=4 SV=1	[more]
A0A067DVL6_CITSI	7.7e-99	73.22	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025076mg PE=4 SV=1	[more]
V4SJ46_9ROSI	2.3e-98	72.80	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029098mg PE=4 SV=1	[more]

BLAST of CmoCh06G017370 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G44960.1	5.5e-88	66.25	SNARE associated Golgi protein family	[more]

BLAST of CmoCh06G017370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446797\|ref\|XP_004141157.1\|	5.0e-123	88.98	PREDICTED: uncharacterized protein LOC101209858 [Cucumis sativus]	[more]
gi\|659130424\|ref\|XP_008465163.1\|	1.2e-121	88.58	PREDICTED: uncharacterized protein LOC103502831 [Cucumis melo]	[more]
gi\|743920558\|ref\|XP_011004328.1\|	3.5e-100	76.99	PREDICTED: uncharacterized protein LOC105110851 [Populus euphratica]	[more]
gi\|566148622\|ref\|XP_002297894.2\|	4.5e-100	76.99	hypothetical protein POPTR_0001s12660g [Populus trichocarpa]	[more]
gi\|802754261\|ref\|XP_012088675.1\|	6.5e-99	77.87	PREDICTED: uncharacterized protein LOC105647268 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015414	TMEM64

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G017370.1	CmoCh06G017370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015414	Transmembrane protein TMEM64/TMEM41	PANTHER	PTHR12677	UNCHARACTERIZED	coord: 6..247 score: 1.0E
None	No IPR available	PANTHER	PTHR12677:SF2	SUBFAMILY NOT NAMED	coord: 6..247 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G017370	Cucsa.340770	Cucumber (Gy14) v1	cgycmoB0941
CmoCh06G017370	CmaCh14G010650	Cucurbita maxima (Rimu)	cmacmoB273
CmoCh06G017370	CmaCh06G017500	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G017370	Cla017197	Watermelon (97103) v1	cmowmB785
CmoCh06G017370	Csa3G845510	Cucumber (Chinese Long) v2	cmocuB810
CmoCh06G017370	MELO3C026753	Melon (DHL92) v3.5.1	cmomeB748
CmoCh06G017370	ClCG10G013090	Watermelon (Charleston Gray)	cmowcgB732
CmoCh06G017370	CSPI03G41020	Wild cucumber (PI 183967)	cmocpiB818
CmoCh06G017370	Lsi03G012710	Bottle gourd (USVL1VR-Ls)	cmolsiB748
CmoCh06G017370	Cp4.1LG08g06630	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G017370	MELO3C026753.2	Melon (DHL92) v3.6.1	cmomedB850
CmoCh06G017370	CsaV3_3G043490	Cucumber (Chinese Long) v3	cmocucB0956
CmoCh06G017370	Cla97C10G195950	Watermelon (97103) v2	cmowmbB821
CmoCh06G017370	Bhi11G001270	Wax gourd	cmowgoB0989
CmoCh06G017370	CsGy3G038500	Cucumber (Gy14) v2	cgybcmoB404
CmoCh06G017370	Carg11275	Silver-seed gourd	carcmoB1106
CmoCh06G017370	Carg23323	Silver-seed gourd	carcmoB0383

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G017370	CmoCh14G010840	Cucurbita moschata (Rifu)	cmocmoB226

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G017370	Cucurbita pepo (Zucchini)	cmocpeB786
CmoCh06G017370	Cucurbita maxima (Rimu)	cmacmoB270