Carg11275 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11275
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	SNARE associated Golgi protein family
Location	Cucurbita_argyrosperma_scaffold_013 : 1241386 .. 1243760 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTAAGACGATCGGTGGTAGTTTCGGCGCCGGACGGTTTCGGCCACAATCAAATCTCGAGAGAGATAGAGAGATGGGAGCTGGGTGGGGACGGTGGTCCAAATTAGCCGCCGTTGTGGCGGTTGTGGCGGTTCTAAGAGAATTAGGGAAGCTTTACGGATGGGAAATTGACAGAGAAGCGGCTCTCAAGGTTTTCGGCCAATGGTCAGATCGCTTGGGGGTATGGGCCATGCCTGCGTATGTCGGCGTCCATACCTTCACACTTGCACTCTGTTTGCCCTATGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCTGCCGTCATTTGCGTGTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTTGATCTCTAATTTCTTGCCATATGATTTTGCTTTATTAGATTCTGAGTTTATGTAAGGCTTATGATATATCGTAATATGAAATCGTCTGCTCGTTGTATGGAATTAGGTTGGAATTTTCTAGCTATAGTTTAAGATGTGTTTGTTGATTGGACAGTTTTCTTTTGTTCGCATCTTGGGATCTTTTATCTGTTCTATATTTTAATTGTAAGTGGATGCCACGAAATGGATTCCTTTTCGCTGATGCTTTAGTTTGAAGATAGATGTTCAACACGTCCTTAGTCTGTGTAGATAAGTGAAATGATACACGTTTTGCTGGTTGTACATAAGAATCGTTAGCATTGTGTTCAAAAGAATCTTTGCTTGGCATCTAAAGGGATGGGATAGCCACAAAGAAGCTGAATTAGAGCTACCGCATTATGTTAGGGAAGTACTGATGTAGGTTAAATTGATTAAATGAGTCCACCCATCTTATAGCTGGAAAGGTGCCATGAAAGTAGAGGTAATCTAGTCATCTGATGGTCTTTTACAAAAAGTGCTTAAACTTGTGGACTAAGTATAGTTATGATGTTCTACAATTTGTTGCTAGTGGTCAACTGATCATGGAGTTTTAGATTTCCAAATACCTTTTGTCTAAGCAGCTACCAAGGATTTGTTTCATTTGAAAAAGTTGTAGAAACAGGGATCCAATGATTTTTAAGAAAACAGCACACTCCCTCCATTGATGAGCTTTTTGAGGTCAACATACTTGAATGGATTCCAGAGAGTAGTGGATGCTTTACCTGCAAATTGGTGTTCGTACACAATCCACCTTTAGCAGAAAACAAAGGGTTGTTGTATGACTCTTCATTTCTTTAGCTATCATCAATGATTGCAATCAACCATTTAGAATTGATTATATATGCACTTCAAAGTTAGTTTGACCAATAAATTGCTTGTTTTTCTAATATACTTTATTTCTGTCATCTTTTTGATTGGGACGTGGTGATCTGACAGGCTTTAATTGGTTGTTTATATAAAATGTTTGAAGAGTCACTTGATTGGTTCTTTTGAATTTCCATTCTCTATCCCTCTTCTCAATCTCAAGCCAAGGTCATCTTTTGTTCAGGTTACTTTTTAAGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAACAAATACTTCCATCTTCTTTCTAGAGGAGTAGAGCAAGATGGATGGAAATTTGTCCTTCTTGCCCGCTTTTCACCGATCCCCTCGTACGTTATAAATTATGCTCTTGCTGCAACCAAAGTTGGATTCTTTCTAGACTTTCTGCTACCTACTGTAATTGGATGCATGCCGATGATACTTCAGAACACGTCGATTGGCAGTCTTGCCGGTGCTGCAGTTGCTTCAGCGTCTGGCTCCCAGAAATCTCAGATATGGTCATACATTTTTCCTGTACTTGGTATTGGGTCGAGCATTCTTATTTCCTTGAGGATTAAAAAGTACTCTAGTGGACTCAAAATGGCCGAAAGTTCCTCTTGTGTTGAAAGGAGTGACAGTGTTGAGCCATCCAAAGCCAAGGAGTTTAAGAAAACTCAATAGTTTTTAGTAACAGATGAGTTATTTACAAACTCTTAGATGATATATTTTCATTCATGATATTCATATACCCTGGAGATCAGTGTCCACGACATTTTCCCCCTTAAGAAGTTAGTAGATTTATGGCCTATTTTAGTCTTCTGATTTTGTAGTAACCGTTCACTCGCATTAATCCAAGCCTATGATGACATATAAGTAAACTGAGAGATGGATATTCAGGTGAAATGTCCTTGGAGGAGATAGGGCACTAATTTCCAGAAGTTTAGGAGGGTTATCTTATATAGTAAACACTTTACTGTAATTGATCTCGATTGTTTTATACATTCCATCATACATACTTGATATCTATTTATCATACTATACTATGAAATTATATCTTTTACCTTGTATGAAGTTTGTCATAAATACTTCA

mRNA sequence

CATTTAAGACGATCGGTGGTAGTTTCGGCGCCGGACGGTTTCGGCCACAATCAAATCTCGAGAGAGATAGAGAGATGGGAGCTGGGTGGGGACGGTGGTCCAAATTAGCCGCCGTTGTGGCGGTTGTGGCGGTTCTAAGAGAATTAGGGAAGCTTTACGGATGGGAAATTGACAGAGAAGCGGCTCTCAAGGTTTTCGGCCAATGGTCAGATCGCTTGGGGGTATGGGCCATGCCTGCGTATGTCGGCGTCCATACCTTCACACTTGCACTCTGTTTGCCCTATGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCTGCCGTCATTTGCGTGTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTACTTTTTAAGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAACAAATACTTCCATCTTCTTTCTAGAGGAGTAGAGCAAGATGGATGGAAATTTGTCCTTCTTGCCCGCTTTTCACCGATCCCCTCGTACGTTATAAATTATGCTCTTGCTGCAACCAAAGTTGGATTCTTTCTAGACTTTCTGCTACCTACTGTAATTGGATGCATGCCGATGATACTTCAGAACACGTCGATTGGCAGTCTTGCCGGTGCTGCAGTTGCTTCAGCGTCTGGCTCCCAGAAATCTCAGATATGGTCATACATTTTTCCTGTACTTGGTATTGGGTCGAGCATTCTTATTTCCTTGAGGATTAAAAAGTACTCTAGTGGACTCAAAATGGCCGAAAGTTCCTCTTGTGTTGAAAGGAGTGACAGTGTTGAGCCATCCAAAGCCAAGGAGTTTAAGAAAACTCAATAGTTTTTAGTAACAGATGAGTTATTTACAAACTCTTAGATGATATATTTTCATTCATGATATTCATATACCCTGGAGATCAGTGTCCACGACATTTTCCCCCTTAAGAAGTTAGTAGATTTATGGCCTATTTTAGTCTTCTGATTTTGTAGTAACCGTTCACTCGCATTAATCCAAGCCTATGATGACATATAAGTAAACTGAGAGATGGATATTCAGGTGAAATGTCCTTGGAGGAGATAGGGCACTAATTTCCAGAAGTTTAGGAGGGTTATCTTATATAGTAAACACTTTACTGTAATTGATCTCGATTGTTTTATACATTCCATCATACATACTTGATATCTATTTATCATACTATACTATGAAATTATATCTTTTACCTTGTATGAAGTTTGTCATAAATACTTCA

Coding sequence (CDS)

ATGGGAGCTGGGTGGGGACGGTGGTCCAAATTAGCCGCCGTTGTGGCGGTTGTGGCGGTTCTAAGAGAATTAGGGAAGCTTTACGGATGGGAAATTGACAGAGAAGCGGCTCTCAAGGTTTTCGGCCAATGGTCAGATCGCTTGGGGGTATGGGCCATGCCTGCGTATGTCGGCGTCCATACCTTCACACTTGCACTCTGTTTGCCCTATGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCTGCCGTCATTTGCGTGTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTACTTTTTAAGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAACAAATACTTCCATCTTCTTTCTAGAGGAGTAGAGCAAGATGGATGGAAATTTGTCCTTCTTGCCCGCTTTTCACCGATCCCCTCGTACGTTATAAATTATGCTCTTGCTGCAACCAAAGTTGGATTCTTTCTAGACTTTCTGCTACCTACTGTAATTGGATGCATGCCGATGATACTTCAGAACACGTCGATTGGCAGTCTTGCCGGTGCTGCAGTTGCTTCAGCGTCTGGCTCCCAGAAATCTCAGATATGGTCATACATTTTTCCTGTACTTGGTATTGGGTCGAGCATTCTTATTTCCTTGAGGATTAAAAAGTACTCTAGTGGACTCAAAATGGCCGAAAGTTCCTCTTGTGTTGAAAGGAGTGACAGTGTTGAGCCATCCAAAGCCAAGGAGTTTAAGAAAACTCAATAG

Protein sequence

MGAGWGRWSKLAAVVAVVAVLRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVHTFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSSCVERSDSVEPSKAKEFKKTQ

Homology

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BLAST of Carg11275 vs. NCBI nr
Match: XP_022934149.1 (uncharacterized protein LOC111441406 [Cucurbita moschata])

HSP 1 Score: 469.5 bits (1207), Expect = 7.2e-129
Identity = 257/260 (98.85%), Postives = 257/260 (98.85%), Query Frame = 0


Query: 1   MGAGWGRXXXXXXXXXXXXXXXELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           MGAGWGR XXXXXXXXXXXXX ELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH
Sbjct: 1   MGAGWGRWXXXXXXXXXXXXXRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 CVERSDSVEPSKAKEFKKTQ 261
            VERSDSVEPSKAKEFKKTQ
Sbjct: 241 SVERSDSVEPSKAKEFKKTQ 260

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BLAST of Carg11275 vs. NCBI nr
Match: XP_023520742.1 (uncharacterized protein LOC111784193 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466.8 bits (1200), Expect = 4.6e-128
Identity = 242/260 (93.08%), Postives = 243/260 (93.46%), Query Frame = 0


Query: 1   MGAGWGRXXXXXXXXXXXXXXXELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           MGAGWGR                LGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVG+H
Sbjct: 1   MGAGWGRWFKLAAVVAVVAILRALGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 CVERSDSVEPSKAKEFKKTQ 261
            VERSDSVEPSKAKEFKKTQ
Sbjct: 241 SVERSDSVEPSKAKEFKKTQ 260

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BLAST of Carg11275 vs. NCBI nr
Match: XP_023521094.1 (uncharacterized protein LOC111784712 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.5 bits (1168), Expect = 2.4e-124
Identity = 238/260 (91.54%), Postives = 239/260 (91.92%), Query Frame = 0


Query: 1   MGAGWGRXXXXXXXXXXXXXXXELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           MGAGWGR               ELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVG+H
Sbjct: 1   MGAGWGRWFKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 CVERSDSVEPSKAKEFKKTQ 261
                 SVEPSKAKEFKKTQ
Sbjct: 241 ------SVEPSKAKEFKKTQ 254

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BLAST of Carg11275 vs. NCBI nr
Match: XP_022982788.1 (uncharacterized protein LOC111481545 [Cucurbita maxima])

HSP 1 Score: 451.1 bits (1159), Expect = 2.6e-123
Identity = 249/260 (95.77%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MGAGWGRXXXXXXXXXXXXXXXELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           MGAGWGR XXXXXXXXXXXXX ELGKLYGWEIDREAALKVFG WSDRLGVWAMPAYVG+H
Sbjct: 1   MGAGWGRWXXXXXXXXXXXXXRELGKLYGWEIDREAALKVFGHWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 CVERSDSVEPSKAKEFKKTQ 261
                 SVEPSK KEFKKTQ
Sbjct: 241 ------SVEPSKTKEFKKTQ 254

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BLAST of Carg11275 vs. NCBI nr
Match: XP_004141157.1 (PREDICTED: uncharacterized protein LOC101209858 [Cucumis sativus] >KGN59784.1 hypothetical protein Csa_3G845510 [Cucumis sativus])

HSP 1 Score: 437.2 bits (1123), Expect = 3.9e-119
Identity = 237/260 (91.15%), Postives = 245/260 (94.23%), Query Frame = 0


Query: 1   MGAGWGRXXXXXXXXXXXXXXXELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           MGA WGR  XXXXXXXXXXX  +LGK YGWE DR+AALKVF QWSDRLGVWAMPAYVG+H
Sbjct: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGLK+A SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240

Query: 241 CVERSDSVEPSKAKEFKKTQ 261
             E +D+V+PSK KEFKKT+
Sbjct: 241 SDEGNDNVDPSKTKEFKKTR 260

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BLAST of Carg11275 vs. TAIR10
Match: AT1G44960.1 (SNARE associated Golgi protein family)

HSP 1 Score: 314.3 bits (804), Expect = 7.0e-86
Identity = 156/218 (71.56%), Postives = 182/218 (83.49%), Query Frame = 0


Query: 28  YGWEIDREAALKVFGQWSDRLGVWAMPAYVGVHTFTLALCLPYAVFFEATASLLFGFFPA 87
           YGW  ++EAAL+   +WSDRLG+WA+P YV VHT TLALCLP+AVFFEA AS+LFGF PA
Sbjct: 25  YGW--NKEAALEKLKEWSDRLGIWAIPTYVAVHTITLALCLPHAVFFEAGASMLFGFLPA 84

Query: 88  VICVFSAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFS 147
           ++CVFSAKVL AS SFWIGR +FK+S+ A  WA  NKYF++LSRGVE+DGWKFVLLARFS
Sbjct: 85  LLCVFSAKVLAASFSFWIGRFVFKSSTRATGWAHSNKYFNILSRGVERDGWKFVLLARFS 144

Query: 148 PIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGSQKSQIW 207
           PIPSYVINYALAAT+V F  DFL PTVIGC+PMILQN S+GSLAG AVAS +G QKSQ+W
Sbjct: 145 PIPSYVINYALAATEVRFVADFLFPTVIGCLPMILQNASVGSLAGMAVASVAGKQKSQVW 204

Query: 208 SYIFPVLGIGSSILISLRIKKYSSGLKMAESSSCVERS 246
            Y+FPVLGI SS+LISLRIKKYS+G+  A S +    S
Sbjct: 205 GYVFPVLGILSSVLISLRIKKYSAGITEASSDTSANNS 240

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BLAST of Carg11275 vs. TAIR10
Match: AT1G03260.1 (SNARE associated Golgi protein family)

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 50/211 (23.70%), Postives = 93/211 (44.08%), Query Frame = 0


Query: 35  EAALKVFGQW-SDRLGVWAMPAYVGVHTFTLALCLPYAVFFEATASLLFGFFPAVICVFS 94
           E  LK F  W  + LG +  P  + +    L +    A         LFG     +    
Sbjct: 33  EQKLKDFLLWIKEDLGPFG-PLALALAYIPLTIVAVPASVLTLGGGYLFGLPVGFVADSL 92

Query: 95  AKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFSPI-PSY 154
              LGA+ +F +GR + K  S      +    F  +S  +++ G+K VLL R  PI P  
Sbjct: 93  GATLGATAAFLLGRTIGK--SYVTSKIKHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFN 152

Query: 155 VINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGSQKSQIWSYIFP 214
           ++NY L+ T V    +++L T +G MP+      +G+          G  +  ++ ++  
Sbjct: 153 MLNYLLSVTPVRLG-EYMLATWLGMMPITFALVYVGTTLKDLSDITHGWHEVSVFRWVIM 212

Query: 215 VLGIGSSILISL---RIKKYSSGLKMAESSS 241
           ++G+  ++++ +   R+ K S    +AE+ +
Sbjct: 213 MVGVALAVILIICITRVAKSSLDKALAENGT 239

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BLAST of Carg11275 vs. TAIR10
Match: AT1G22850.1 (SNARE associated Golgi protein family)

HSP 1 Score: 42.7 bits (99), Expect = 3.9e-04
Identity = 41/163 (25.15%), Postives = 74/163 (45.40%), Query Frame = 0


Query: 38  LKVFGQWSDRLGVWAMPAYVGVHTFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVL 97
           L  F  + +  G      ++ V+     L +P A+    +A LLFG     I V  +  +
Sbjct: 138 LTQFSTYIEGYGTAGYALFIAVYAGLEILAIP-ALPLTMSAGLLFGPLIGTIIVSISGTM 197

Query: 98  GASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFSP-IPSYVINY 157
            AS++F I R   +     ++  + NK F  + + + ++G++ V L R SP +P  + NY
Sbjct: 198 AASVAFLIARYFAR--ERILKLVEDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNY 257

Query: 158 ALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASAS 200
               T V  F+ ++L + +G +P      S G+   A +   S
Sbjct: 258 LYGLTSVK-FVPYVLGSWLGMLPGSWAYVSAGAFGRAIIQEES 296

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BLAST of Carg11275 vs. TrEMBL
Match: tr|A0A0A0LFP4|A0A0A0LFP4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.6e-119
Identity = 237/260 (91.15%), Postives = 245/260 (94.23%), Query Frame = 0


Query: 1   MGAGWGRXXXXXXXXXXXXXXXELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           MGA WGR  XXXXXXXXXXX  +LGK YGWE DR+AALKVF QWSDRLGVWAMPAYVG+H
Sbjct: 1   MGAAWGRWSXXXXXXXXXXXLRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGLK+A SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240

Query: 241 CVERSDSVEPSKAKEFKKTQ 261
             E +D+V+PSK KEFKKT+
Sbjct: 241 SDEGNDNVDPSKTKEFKKTR 260

[Close]

BLAST of Carg11275 vs. TrEMBL
Match: tr|A0A1S3CN62|A0A1S3CN62_CUCME (uncharacterized protein LOC103502831 OS=Cucumis melo OX=3656 GN=LOC103502831 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.7e-118
Identity = 226/260 (86.92%), Postives = 230/260 (88.46%), Query Frame = 0


Query: 1   MGAGWGRXXXXXXXXXXXXXXXELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           M   WGR               ELGK YGWE DREAALKVF QWSDRLGVWAMPAYVG+H
Sbjct: 1   MAPAWGRWSKLAALVAAVAILRELGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFTNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGS KSQIWSYIFPVLGIGSSILIS RIKKYSSGLKM  SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSHKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKMTGSSS 240

Query: 241 CVERSDSVEPSKAKEFKKTQ 261
             E +D+V+PSK KEFKKTQ
Sbjct: 241 SDEGNDNVDPSKTKEFKKTQ 260

[Close]

BLAST of Carg11275 vs. TrEMBL
Match: tr|B9RG32|B9RG32_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1438890 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.0e-94
Identity = 180/233 (77.25%), Postives = 205/233 (87.98%), Query Frame = 0


Query: 23  ELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVHTFTLALCLPYAVFFEATASLLF 82
           EL K  GW  D+EAALKVF +WSD LG+WAMP YVG+HT TLALCLPYAVFFEA A LLF
Sbjct: 20  ELIKQTGW--DKEAALKVFAEWSDGLGIWAMPIYVGIHTLTLALCLPYAVFFEAAAPLLF 79

Query: 83  GFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVL 142
           GF PAV+CVFSAK+LGASLSFWIGRL+F++SSSAMEWAQRNKYFHLLS+GVEQDGW+FVL
Sbjct: 80  GFMPAVLCVFSAKLLGASLSFWIGRLVFRSSSSAMEWAQRNKYFHLLSKGVEQDGWRFVL 139

Query: 143 LARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGSQ 202
           LARFSP+PSYVINYALAATKV F +DFLLPT+IGC+PMILQNTSIGSLAGAAVAS SGSQ
Sbjct: 140 LARFSPMPSYVINYALAATKVEFLVDFLLPTIIGCLPMILQNTSIGSLAGAAVASTSGSQ 199

Query: 203 KSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSSCVERSDSVEPSKAKE 256
           KS++WSY+FP+LGI SSILIS+RIKKYSS + M ESS     +DS +   +K+
Sbjct: 200 KSKVWSYLFPLLGIISSILISMRIKKYSSDITMVESSPSNHTTDSNDVDSSKD 250

[Close]

BLAST of Carg11275 vs. TrEMBL
Match: tr|A0A2C9VBN2|A0A2C9VBN2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G172600 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.7e-94
Identity = 178/224 (79.46%), Postives = 200/224 (89.29%), Query Frame = 0


Query: 23  ELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVHTFTLALCLPYAVFFEATASLLF 82
           EL K  GW  D++AAL+VF +WSDRLGVWAMP YVG+HT +LALCLPY+VFFEA ASLLF
Sbjct: 19  ELSKQLGW--DKDAALQVFAEWSDRLGVWAMPVYVGIHTVSLALCLPYSVFFEAGASLLF 78

Query: 83  GFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVL 142
           GFFPAV+CVFSAKV GASLSFWIGRL+F++SSSAMEWAQRNK FHLLSRGVE+DGW+FVL
Sbjct: 79  GFFPAVLCVFSAKVFGASLSFWIGRLVFRSSSSAMEWAQRNKIFHLLSRGVERDGWRFVL 138

Query: 143 LARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGSQ 202
           LARFSP+PSYVINYALAATKVGF +DFLLPTVIGC+PMILQNTSIGSLAGAAVAS SGSQ
Sbjct: 139 LARFSPMPSYVINYALAATKVGFLVDFLLPTVIGCLPMILQNTSIGSLAGAAVASTSGSQ 198

Query: 203 KSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSSCVERSD 247
           KSQ+WSYIFP+LGI SS+LISLRI+KYS+ +    SS     SD
Sbjct: 199 KSQVWSYIFPILGIVSSVLISLRIRKYSNDITTVASSPSNHASD 240

[Close]

BLAST of Carg11275 vs. TrEMBL
Match: tr|B9GMW6|B9GMW6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G070800v3 PE=4 SV=2)

HSP 1 Score: 353.6 bits (906), Expect = 3.8e-94
Identity = 176/218 (80.73%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 23  ELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVHTFTLALCLPYAVFFEATASLLF 82
           EL K +GW  D++AAL++ G+WSDRLGVWAMP YVG+HT +LALCLP AVFFEA ASLLF
Sbjct: 19  ELSKQFGW--DKDAALELLGEWSDRLGVWAMPVYVGIHTISLALCLPCAVFFEAGASLLF 78

Query: 83  GFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVL 142
           GF PAV+CVF AKVLGASLSFWIGRL+F++SSSAMEW Q NKYFHLLSRGVE+DGWKFVL
Sbjct: 79  GFLPAVLCVFFAKVLGASLSFWIGRLVFRSSSSAMEWVQSNKYFHLLSRGVEKDGWKFVL 138

Query: 143 LARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGSQ 202
           LARFSP+PSY+INYALAATKVGF +DFLLPTV+GC+PMILQNTSIGSLAGAAVASASGS+
Sbjct: 139 LARFSPMPSYLINYALAATKVGFMVDFLLPTVVGCLPMILQNTSIGSLAGAAVASASGSK 198

Query: 203 KSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 241
           KSQIWSY+FP+LGI SSILISLRIKKYS+ + +AESS+
Sbjct: 199 KSQIWSYLFPLLGIVSSILISLRIKKYSTDITLAESST 234

The following BLAST results are available for this feature:

BLAST of Carg11275 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934149.1	7.2e-129	98.85	uncharacterized protein LOC111441406 [Cucurbita moschata]	[more]
XP_023520742.1	4.6e-128	93.08	uncharacterized protein LOC111784193 [Cucurbita pepo subsp. pepo]	[more]
XP_023521094.1	2.4e-124	91.54	uncharacterized protein LOC111784712 [Cucurbita pepo subsp. pepo]	[more]
XP_022982788.1	2.6e-123	95.77	uncharacterized protein LOC111481545 [Cucurbita maxima]	[more]
XP_004141157.1	3.9e-119	91.15	PREDICTED: uncharacterized protein LOC101209858 [Cucumis sativus] >KGN59784.1 hy...	[more]

BLAST of Carg11275 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G44960.1	7.0e-86	71.56	SNARE associated Golgi protein family	[more]
AT1G03260.1	2.3e-04	23.70	SNARE associated Golgi protein family	[more]
AT1G22850.1	3.9e-04	25.15	SNARE associated Golgi protein family	[more]

BLAST of Carg11275 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg11275 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LFP4\|A0A0A0LFP4_CUCSA	2.6e-119	91.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1	[more]
tr\|A0A1S3CN62\|A0A1S3CN62_CUCME	1.7e-118	86.92	uncharacterized protein LOC103502831 OS=Cucumis melo OX=3656 GN=LOC103502831 PE=...	[more]
tr\|B9RG32\|B9RG32_RICCO	1.0e-94	77.25	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1438890 PE=4 SV=1	[more]
tr\|A0A2C9VBN2\|A0A2C9VBN2_MANES	1.7e-94	79.46	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G172600 PE=4 SV=...	[more]
tr\|B9GMW6\|B9GMW6_POPTR	3.8e-94	80.73	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G070800v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR015414	TMEM64
IPR032816	SNARE_assoc

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11275-RA	Carg11275-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032816	SNARE associated Golgi protein	PFAM	PF09335	SNARE_assoc	coord: 68..189 e-value: 4.4E-21 score: 75.5
IPR015414	Transmembrane protein TMEM64	PANTHER	PTHR12677	UNCHARACTERIZED	coord: 7..252
None	No IPR available	PANTHER	PTHR12677:SF2	SUBFAMILY NOT NAMED	coord: 7..252

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11275	Cla017197	Watermelon (97103) v1	carwmB0816
Carg11275	Csa3G845510	Cucumber (Chinese Long) v2	carcuB0831
Carg11275	MELO3C026753	Melon (DHL92) v3.5.1	carmeB0811
Carg11275	ClCG10G013090	Watermelon (Charleston Gray)	carwcgB0792
Carg11275	CSPI03G41020	Wild cucumber (PI 183967)	carcpiB0852
Carg11275	Cucsa.340770	Cucumber (Gy14) v1	carcgyB0935
Carg11275	CmaCh06G017500	Cucurbita maxima (Rimu)	carcmaB1135
Carg11275	CmaCh14G010650	Cucurbita maxima (Rimu)	carcmaB1132
Carg11275	CmoCh06G017370	Cucurbita moschata (Rifu)	carcmoB1106
Carg11275	CmoCh14G010840	Cucurbita moschata (Rifu)	carcmoB1102
Carg11275	Lsi03G012710	Bottle gourd (USVL1VR-Ls)	carlsiB748
Carg11275	Cp4.1LG00g01980	Cucurbita pepo (Zucchini)	carcpeB1142
Carg11275	Cp4.1LG08g06630	Cucurbita pepo (Zucchini)	carcpeB1148
Carg11275	CsGy3G038500	Cucumber (Gy14) v2	carcgybB0804
Carg11275	MELO3C026753.2	Melon (DHL92) v3.6.1	carmedB0822
Carg11275	CsaV3_3G043490	Cucumber (Chinese Long) v3	carcucB0855
Carg11275	Cla97C10G195950	Watermelon (97103) v2	carwmbB0851
Carg11275	Bhi11G001270	Wax gourd	carwgoB0951

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11275	Carg23323	Silver-seed gourd	carcarB314

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11275	Cucurbita pepo (Zucchini)	carcpeB1147