CsaV3_3G027400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G027400
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionDUF1713 domain-containing protein
Locationchr3 : 23704270 .. 23708444 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCAGGTTAGAGTTTTTGCAGTGCAACTGCGATCCAATCTTGCACAATGACGCTCTTCAAGATGGTGATTTCGGGTCTTTAGTGCCATGGTGGGTGCAACTACACTCCTGCTCAATGTCTTGTGTGATATGAATTCAACCATACAACTTTTACATGTGTCCGAAAGAGCAATTACAAGAAGCAAAAAGCAAAGAAGATTCAAGAGACTTTCACACTCACTTCAAAAGCTAGCAAATTCACATCAAGCGGTAAATAATTTTGAGGAAAAAATTATATACAATGTTAGTTCAATAAGTCAAAATGAGAATAGATTAAATATGACTCCAAAAAAATTCAATAGTTTAGAAAACAAACGACAAAATAGTGTGCAGATTTTGTAAAGAAAATGTTGATAATTATGCACTACATGGAAAACGTGAGTCAAACCATGTCAAATGTTCACATAAAAGTTGTCGCCTTCTAAAAAATTTATTTTAAGGCTTTTGAAAACTTTGTGCATTTCTAGTTTTCCAATTTGACTTATAATTTAGCATGCAATCTCATTTTAAGTCTATAGTCTTATTTTCTTCAATTGACATTAAAGTGTATTAAAATGACTTTTGAGCTTCCACCCCATGCACGATCACTTAATCTATAAGATGGATTATAATGCTCTTGAAGATGAAGACTATCAATCTTAAAAAACTTGTACGTATTCAACCATTTTGGTGTTGTGATATCTTTTCAAGTCTTGCTTTGGATTTGATCAAATCAATTCATTGGATTAGTCTTGATCAAGCTAATTCTAGAGTGGATTGTCTTAGGATATAAGAGCAGCCATCGTAGATTCTAGGTTTGATCTATATTAGCTTTCTTTGTGAGTTTCTGCAAGGATTTTAGAAGGAGTTCTAGCTTTGCATCTAATAAACACGGTGGGTGCTTATCATTAGGAAACCTTTTTGAAACTCTATTATGTGAGCAAGCTTTACCCCAAACCTCTTTTGTAATTTTTTCTAAGTTCATCTTATCATTCACTTTCAACAATGAGGACTTGCTTGTTCTTTTGGTTTATATATGTGTGGACTCAGTGTGTGAAGCGTATTGAGTTTATAGTTGAACTAGGCGATACGTCACTGAGCATGTTCACAGCATGCAAGAAGCTTATATTGTGTGATTGGTTCTATGCGATTAGTCATTGGTTATGTACAAGTTTTCCTATTGCTTGTCCAAGTGCAAGCAAAGTAGTAAGTTTACCTAGATGATCCAGGGTCAAACACAGGGAATTGATTTAAGACATTGGTTCTAATATTTACTTACCATCTAGGCGGTATAAAGAATCAAAGAAGAAAGAATATAAAGAATGCAAGAGTAAACTAAATTACTTATCTAAACCTAGAGAATCTACAAAGAGGGGATGAGATGGTGAAATGGGAATGCGAACTGAATATGTGAACTAACTAGTATGCGAGAAAGAGTCGAGGAATATCTATGCATTATAACACGATTAAGCAACGTGATAGCCTTGATGCGGTATAACTTACTCAACCAATTTATAACTAAGGTGTGCTCCTCTCGAAGTCATTAAACGTCACACATGGTCACCTCTAGGGATCCATATGACTAAGTGTGATTAGCCGACATATATCTAAAAGAGTTCACTTATGAGACATATAGAACTTCACGATTAAGGACAGCAACCTCTCAGTGCCTAGTGCCCACACTTGTTCACCTTTCAGGATACAAATGATGGAAGTTGTCTCGCAAAGGAAGAGAACTCTTCCTTGCTACTTATCCTCTCGAGTAGTTGGCAAATTACGCTAGCCAAGCAATGAGAATAGCTCAACTAACGTGATAAGACGATAAGCGAAACTTTCTATCAAGAACTTATCACCAACTTAAACTATCAACACATTGACTGGTGGAAAGTACATAAATGATGAATTGAAAAGGTATAAACATGTAATATATATAAAGAATGTAGGCTTTCGGTCATTGTATAACATGAACAATATGCATATTACACAAATAATATAAAAAGGAAAGACAGAAGATTGGGAATGAATACAAATTAAGGGAATGAGAAATGGAACCTTAACCACTCAGACTCTAAGCTCTCACTTACAGTATGATCGGAAAAGAAAAAAATAAAAAACTTTACAACTTTTATTATTTGGCTCATTCAAGCCCCCATCAAGGTGGCTCATTCGAGCCTCTATTCTTTGTTGAAGGAGTTCTTTTATAGACAACTTTTGGCGAGAAACTCTATTCTTCTTAGTATGCCAGCATCGATTGCAGTCGTGGAACGTCACCTCAACTCTAATTACCATTCTTGTCTTCTAGTAAACAACTTCTTGTGTTGTGATTTGGTCTTCTCGCCCGTTCTATTCGAGAGTGACTCTTCGATTTGCTAATTTCTTCTTTTGTTTATAGACCCACATTACATCATTCCACTAATCAGTTTTTTACCGCTTAGTTTCAACTAATAACAGATTAACTATCTTGGCAACTAATAACAGATAATAACAAACTAACTATCTCATTACATCATTCCACCCCTAGCATCAAACTCGTCTCGAGTTTGTCATGAAAGTTGAAATCCATCCGACGTTGCCTATCTTTGAGAAATTAGTTCTACTTTGATTTACTTGCGCCAGATGGATTCATTTACCTTTGAGAAATTAGTTTTACTTCTCTATTTACCGTGTTTTCAGGTGGACTTTTTGGGCTTAAGTTTCGTTGGTCCATAAGTCTGACCCTTAGACCCTAATGGATTTGAGTCTTATTTAGCTAAACTAAGGACATTTTTTGGGCTCATATTGGACTTTAGCCCATATAATAATATTTAATTTGACCAAAGTAATTAATTTCATTCAAGGATGATCATGATGAAAATATAGCATCAAGATTAGCCAATTTATGCCCTCTTTCTCAATCTTTTATTGGTCTCAAATTCAAATGTTTGTAATTTCTCATTTGTCCCAAATTCAGATATCGGTAATTTTCTCATTAATTTGAGAAATAACGTGACAATTTGTGATTGGTCCAAAATTTCTCATTCAACAGTGTCTATATTTATTTGAATACAACATAAAATGGGATATGAATCAATATTAAAAATTAACAAAATATCCCAAAAAACGGAAAGAAGGTAAGTTTTTACGAACTATTTTTCTTCCAAGATCGCGTTCATAAATCATAATAATAGAAAATATATGATCTTTTTAATAAAAACTAGAGATCTTCTCAATGAAGGCAATCTTTTAGGAAAGTCTGGTTGAAATTAATCACAAGATCTGTTAGTAAAAAATTAGGAGATAGTTTAATAAAAGTTAGGAGATCTCTTAGTCTCAATATCTAACTAGAAGGTCGTGGATTCAAAATATAGTGACCACCTACTTAGAAATTAATTTCTAACGTAGTTTACTTGACATCCAAATGTTGCATTTTCAGACAGGTTTCACACGTGAGATTAGTGGTAGTGGTCCGTGAGAATATGGGTGATTTGTCCCAAGAGGAGAAAGAATCATTCAAGAAGGAAAAAGGAAAAAAGCATGACAATAAAATTTTTTAGAGTAATAGATATTCTCTTTTATTTTTAGGTTATTCTGTGAAATTTTCACCCAAAAAAAAAAAAGAAAAGAAAAAACCAAATTTACTCAACTCCGTCTGATCTCCTTAGGGTTTTGAGGAGCTGGTTATTCTCCTCCTTTCTGCTGAGTTCGCTTCTCTTTTTCATTCCCGAAGTATTCTACGTAAGGCATACAGCTTCATTCAGTTTCCAAAGCCTTCCCTCTTATTCAATGGCGTCCATGCTTCAAAATCTCATTAGAAAATCGCCACCCACGAGATTAATTGCTGCTTTGGGTGCTCAGACCTCACAAAATCTCTCAACACCCTTCATTCTTCACCAGCCCCTTGATTTTGATAAGAAACCAGATGCACATTGCCATTCTAATATAAACTCTGCTTCTACTTCGAATCCGTCTCATTTTTCCCAGTTTTACCCTAGTTTTCCATTTGGGCTTTGCTTGCCCCAAATCTCCTCTACTGGGTTGCTTCCGTTCGAGCCCGATTGTGTTGAGCAAGACGATTCTCGGAAGTTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGCAAGATGAACAAGCATAAGTATAAGAAGCTAAGGAAGCGGCTCCGAAGACAGACATAG

mRNA sequence

ATGCTCAGGTTAGAGTTTTTGCAGTGCAACTGCGATCCAATCTTGCACAATGACGCTCTTCAAGATGGTGATTTCGGGTCTTTAGTGCCATGGGTTTTGAGGAGCTGGTTATTCTCCTCCTTTCTGCTGAGTTCGCTTCTCTTTTTCATTCCCGAAGTATTCTACGTAAGGCATACAGCTTCATTCAGTTTCCAAAGCCTTCCCTCTTATTCAATGGCGTCCATGCTTCAAAATCTCATTAGAAAATCGCCACCCACGAGATTAATTGCTGCTTTGGGTGCTCAGACCTCACAAAATCTCTCAACACCCTTCATTCTTCACCAGCCCCTTGATTTTGATAAGAAACCAGATGCACATTGCCATTCTAATATAAACTCTGCTTCTACTTCGAATCCGTCTCATTTTTCCCAGTTTTACCCTAGTTTTCCATTTGGGCTTTGCTTGCCCCAAATCTCCTCTACTGGGTTGCTTCCGTTCGAGCCCGATTGTGTTGAGCAAGACGATTCTCGGAAGTTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGCAAGATGAACAAGCATAAGTATAAGAAGCTAAGGAAGCGGCTCCGAAGACAGACATAG

Coding sequence (CDS)

ATGCTCAGGTTAGAGTTTTTGCAGTGCAACTGCGATCCAATCTTGCACAATGACGCTCTTCAAGATGGTGATTTCGGGTCTTTAGTGCCATGGGTTTTGAGGAGCTGGTTATTCTCCTCCTTTCTGCTGAGTTCGCTTCTCTTTTTCATTCCCGAAGTATTCTACGTAAGGCATACAGCTTCATTCAGTTTCCAAAGCCTTCCCTCTTATTCAATGGCGTCCATGCTTCAAAATCTCATTAGAAAATCGCCACCCACGAGATTAATTGCTGCTTTGGGTGCTCAGACCTCACAAAATCTCTCAACACCCTTCATTCTTCACCAGCCCCTTGATTTTGATAAGAAACCAGATGCACATTGCCATTCTAATATAAACTCTGCTTCTACTTCGAATCCGTCTCATTTTTCCCAGTTTTACCCTAGTTTTCCATTTGGGCTTTGCTTGCCCCAAATCTCCTCTACTGGGTTGCTTCCGTTCGAGCCCGATTGTGTTGAGCAAGACGATTCTCGGAAGTTGTGGGCTGATAGCGTGAAGAAGAAGAGGAAACGCAAGATGAACAAGCATAAGTATAAGAAGCTAAGGAAGCGGCTCCGAAGACAGACATAG

Protein sequence

MLRLEFLQCNCDPILHNDALQDGDFGSLVPWVLRSWLFSSFLLSSLLFFIPEVFYVRHTASFSFQSLPSYSMASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Homology
[Close]
BLAST of CsaV3_3G027400 vs. NCBI nr
Match: XP_011651574.1 (PREDICTED: uncharacterized protein LOC101220058 [Cucumis sativus] >KGN58211.1 hypothetical protein Csa_3G592160 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 1.4e-55
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 72  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 131
           MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN
Sbjct: 1   MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 60

Query: 132 PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX 191
           PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX
Sbjct: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX 120

Query: 192 XXXXXXRRQT 202
           XXXXX RRQT
Sbjct: 121 XXXXXLRRQT 130

[Close]
BLAST of CsaV3_3G027400 vs. NCBI nr
Match: XP_022934588.1 (uncharacterized protein LOC111441723 [Cucurbita moschata])

HSP 1 Score: 193.0 bits (489), Expect = 1.0e-45
Identity = 112/130 (86.15%), Postives = 118/130 (90.77%), Query Frame = 0 

Query: 72  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 131
           MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSN
Sbjct: 1   MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSN 60

Query: 132 PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX 191
           PSHFS FYPSFPFG CLPQISS+G+LPFEP+ VEQDDSRKLWADSVKKXXXXXXXXXXXX
Sbjct: 61  PSHFSLFYPSFPFGFCLPQISSSGMLPFEPEFVEQDDSRKLWADSVKKXXXXXXXXXXXX 120

Query: 192 XXXXXXRRQT 202
           XXXXX RRQT
Sbjct: 121 XXXXXLRRQT 130

[Close]
BLAST of CsaV3_3G027400 vs. NCBI nr
Match: XP_023526336.1 (uncharacterized protein LOC111789858 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 1.0e-45
Identity = 112/130 (86.15%), Postives = 118/130 (90.77%), Query Frame = 0 

Query: 72  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 131
           MASMLQ L+RKSPPTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STSN
Sbjct: 1   MASMLQKLVRKSPPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSN 60

Query: 132 PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX 191
           PSHFS FYPSFPFG CLPQISS+G+LPFEPD VEQD+SRKLWADSVKKXXXXXXXXXXXX
Sbjct: 61  PSHFSLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDESRKLWADSVKKXXXXXXXXXXXX 120

Query: 192 XXXXXXRRQT 202
           XXXXX RRQT
Sbjct: 121 XXXXXLRRQT 130

[Close]
BLAST of CsaV3_3G027400 vs. NCBI nr
Match: XP_022984015.1 (uncharacterized protein LOC111482461 [Cucurbita maxima])

HSP 1 Score: 183.7 bits (465), Expect = 6.1e-43
Identity = 109/130 (83.85%), Postives = 115/130 (88.46%), Query Frame = 0 

Query: 72  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 131
           MASMLQ L+RKS PTRLIAALG QTSQN   P+ILHQPLDFDKKPD HC SN+NS STS+
Sbjct: 1   MASMLQKLVRKSSPTRLIAALGTQTSQNPLKPYILHQPLDFDKKPDRHCDSNLNSVSTSD 60

Query: 132 PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX 191
            SHF  FYPSFPFG CLPQISS+G+LPFEPD VEQDDSRKLWADSVKKXXXXXXXXXXXX
Sbjct: 61  LSHFPLFYPSFPFGFCLPQISSSGMLPFEPDFVEQDDSRKLWADSVKKXXXXXXXXXXXX 120

Query: 192 XXXXXXRRQT 202
           XXXXX RRQT
Sbjct: 121 XXXXXLRRQT 130

[Close]
BLAST of CsaV3_3G027400 vs. NCBI nr
Match: XP_023530210.1 (uncharacterized protein LOC111792842 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.3 bits (451), Expect = 2.6e-41
Identity = 106/130 (81.54%), Postives = 114/130 (87.69%), Query Frame = 0 

Query: 72  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 131
           MAS+LQ LIRKSPPTR IAALG+QTSQNLS P+ILHQPLD D+KPD HC SN+NS STSN
Sbjct: 1   MASILQKLIRKSPPTRTIAALGSQTSQNLSLPYILHQPLDIDRKPDGHCDSNLNSVSTSN 60

Query: 132 PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX 191
           PS FS F+PSFPFGLCL QI STG + FEPD VE+DD RKLWADSVKKXXXXXXXXXXXX
Sbjct: 61  PSQFSLFFPSFPFGLCLQQIPSTGSIRFEPDYVEEDDCRKLWADSVKKXXXXXXXXXXXX 120

Query: 192 XXXXXXRRQT 202
           XXXXX RRQT
Sbjct: 121 XXXXXLRRQT 130

[Close]
BLAST of CsaV3_3G027400 vs. TrEMBL
Match: tr|A0A0A0LDP0|A0A0A0LDP0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592160 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.3e-56
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 72  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 131
           MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN
Sbjct: 1   MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 60

Query: 132 PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX 191
           PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX
Sbjct: 61  PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX 120

Query: 192 XXXXXXRRQT 202
           XXXXX RRQT
Sbjct: 121 XXXXXLRRQT 130

[Close]
BLAST of CsaV3_3G027400 vs. TrEMBL
Match: tr|M5XB24|M5XB24_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa012279mg PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.6e-15
Identity = 55/115 (47.83%), Postives = 68/115 (59.13%), Query Frame = 0 

Query: 71  SMASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNIN----- 130
           SMAS +Q ++R+S PTR+I AL    + NL    ILHQP      PD H   N++     
Sbjct: 44  SMASTIQRVLRRSQPTRIIDALHNPAASNL----ILHQPHIDQTNPDPHQFLNLSPLLIV 103

Query: 131 -SASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKK 180
                   S FS  +PSFPFG+CL  ISS+GL+  E   VE DDSRK+WADSVKK
Sbjct: 104 PKTQNFGSSGFSHIFPSFPFGICLNPISSSGLVSSEAVEVEFDDSRKVWADSVKK 154

[Close]
BLAST of CsaV3_3G027400 vs. TrEMBL
Match: tr|A0A2N9F6Q7|A0A2N9F6Q7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10724 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 67/130 (51.54%), Postives = 79/130 (60.77%), Query Frame = 0 

Query: 72  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNINSASTSN 131
           MAS LQ L+RKSP TR++AAL    + N ++P I HQP   + KP +    +   A    
Sbjct: 1   MASTLQKLLRKSPATRIVAALQNPQASNPTSPLIFHQPHLIEPKPGSPFLGS-PKAEILT 60

Query: 132 PSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXXXXXXXX 191
              FSQ YPSFPFG  L  I STG +P E +    DDSR +WADSVKK XXXXXXXXXXX
Sbjct: 61  HFQFSQIYPSFPFGFFLNPICSTGSVPSEAEDAALDDSRTVWADSVKKKXXXXXXXXXXX 120

Query: 192 XXXXXXRRQT 202
                 RRQT
Sbjct: 121 KLRRRLRRQT 129

[Close]
BLAST of CsaV3_3G027400 vs. TrEMBL
Match: tr|A0A251Q7M0|A0A251Q7M0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G296000 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.6e-15
Identity = 54/114 (47.37%), Postives = 67/114 (58.77%), Query Frame = 0 

Query: 72  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSNIN------ 131
           MAS +Q ++R+S PTR+I AL    + NL    ILHQP      PD H   N++      
Sbjct: 1   MASTIQRVLRRSQPTRIIDALHNPAASNL----ILHQPHIDQTNPDPHQFLNLSPLLIVP 60

Query: 132 SASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKK 180
                  S FS  +PSFPFG+CL  ISS+GL+  E   VE DDSRK+WADSVKK
Sbjct: 61  KTQNFGSSGFSHIFPSFPFGICLNPISSSGLVSSEAVEVEFDDSRKVWADSVKK 110

[Close]
BLAST of CsaV3_3G027400 vs. TrEMBL
Match: tr|A0A2P5BCE5|A0A2P5BCE5_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_325960 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.9e-15
Identity = 57/136 (41.91%), Postives = 70/136 (51.47%), Query Frame = 0 

Query: 72  MASMLQNLIRKSPPTRLIAALGAQTSQNLSTPFILHQPLDFDKKPDAHCHSN------IN 131
           MAS +Q ++RKSPP R+   L  +   NL+ P    QP   + KPD     N      + 
Sbjct: 1   MASTIQKILRKSPPPRIFTDLYPKRVPNLNVPLTFQQPHCNEIKPDPFLGHNPIQIPFLG 60

Query: 132 SASTSNPSHFSQFYPSFPFGLCLPQISSTGLLPFEPDCVEQDDSRKLWADSVKKXXXXXX 191
           +  T N S FS  YPSFPFG CL  +  +G +P E   V  DDS K+WADSVKK  XXXX
Sbjct: 61  ARETDNLSPFSHIYPSFPFGFCLNPLPLSGSIPSEAGDVSMDDSTKVWADSVKKKRXXXX 120

Query: 192 XXXXXXXXXXXXRRQT 202
                       RRQT
Sbjct: 121 NKHKYQKLRKRLRRQT 136

The following BLAST results are available for this feature:
BLAST of CsaV3_3G027400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651574.11.4e-5599.23PREDICTED: uncharacterized protein LOC101220058 [Cucumis sativus] >KGN58211.1 hy... [more]
XP_022934588.11.0e-4586.15uncharacterized protein LOC111441723 [Cucurbita moschata][more]
XP_023526336.11.0e-4586.15uncharacterized protein LOC111789858 [Cucurbita pepo subsp. pepo][more]
XP_022984015.16.1e-4383.85uncharacterized protein LOC111482461 [Cucurbita maxima][more]
XP_023530210.12.6e-4181.54uncharacterized protein LOC111792842 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_3G027400 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G027400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G027400 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LDP0|A0A0A0LDP0_CUCSA9.3e-5699.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592160 PE=4 SV=1[more]
tr|M5XB24|M5XB24_PRUPE1.6e-1547.83Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa012279mg PE=4 SV=1[more]
tr|A0A2N9F6Q7|A0A2N9F6Q7_FAGSY2.1e-1551.54Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10724 PE=4 SV=1[more]
tr|A0A251Q7M0|A0A251Q7M0_PRUPE4.6e-1547.37Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G296000 PE=4 SV=1[more]
tr|A0A2P5BCE5|A0A2P5BCE5_9ROSA7.9e-1541.91Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_325960 PE=4 S... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013177DUF1713
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G027400.1CsaV3_3G027400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013177Domain of unknown function DUF1713SMARTSM01155DUF1713_2coord: 173..200
e-value: 3.3E-7
score: 39.9
IPR013177Domain of unknown function DUF1713PFAMPF08213DUF1713coord: 174..199
e-value: 3.6E-9
score: 36.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..201
NoneNo IPR availablePANTHERPTHR32035FAMILY NOT NAMEDcoord: 115..201
NoneNo IPR availablePANTHERPTHR32035:SF5SUBFAMILY NOT NAMEDcoord: 115..201

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G027400CSPI03G25870Wild cucumber (PI 183967)cpicucB144
CsaV3_3G027400Cucsa.156290Cucumber (Gy14) v1cgycucB235
CsaV3_3G027400CmaCh14G006930Cucurbita maxima (Rimu)cmacucB0292
CsaV3_3G027400CmaCh11G014750Cucurbita maxima (Rimu)cmacucB0148
CsaV3_3G027400CmoCh14G007090Cucurbita moschata (Rifu)cmocucB0284
CsaV3_3G027400Cp4.1LG03g07210Cucurbita pepo (Zucchini)cpecucB0760
CsaV3_3G027400Cp4.1LG04g05840Cucurbita pepo (Zucchini)cpecucB0837
CsaV3_3G027400CsGy3G024250Cucumber (Gy14) v2cgybcucB117
CsaV3_3G027400Carg15587Silver-seed gourdcarcucB0399
CsaV3_3G027400Carg09686Silver-seed gourdcarcucB0467
CsaV3_3G027400MELO3C014838Melon (DHL92) v3.5.1cucmeB250
CsaV3_3G027400ClCG05G013140Watermelon (Charleston Gray)cucwcgB240
CsaV3_3G027400Lsi05G004830Bottle gourd (USVL1VR-Ls)cuclsiB233
CsaV3_3G027400MELO3C014838.2Melon (DHL92) v3.6.1cucmedB233
CsaV3_3G027400Cla97C05G094710Watermelon (97103) v2cucwmbB219
CsaV3_3G027400Bhi01G001578Wax gourdcucwgoB289
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G027400Cucumber (Chinese Long) v3cuccucB017
CsaV3_3G027400Cucumber (Gy14) v2cgybcucB026
CsaV3_3G027400Cucurbita maxima (Rimu)cmacucB0085
CsaV3_3G027400Cucurbita maxima (Rimu)cmacucB0146
CsaV3_3G027400Cucurbita moschata (Rifu)cmocucB0074
CsaV3_3G027400Cucurbita moschata (Rifu)cmocucB0128
CsaV3_3G027400Cucurbita moschata (Rifu)cmocucB0126
CsaV3_3G027400Cucurbita pepo (Zucchini)cpecucB0457
CsaV3_3G027400Cucurbita pepo (Zucchini)cpecucB0754
CsaV3_3G027400Cucurbita pepo (Zucchini)cpecucB0844
CsaV3_3G027400Wild cucumber (PI 183967)cpicucB028
CsaV3_3G027400Bottle gourd (USVL1VR-Ls)cuclsiB247
CsaV3_3G027400Melon (DHL92) v3.5.1cucmeB196
CsaV3_3G027400Melon (DHL92) v3.6.1cucmedB187
CsaV3_3G027400Watermelon (Charleston Gray)cucwcgB255
CsaV3_3G027400Watermelon (97103) v1cucwmB289
CsaV3_3G027400Watermelon (97103) v2cucwmbB234