CsaV3_3G020070 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGCGTACAAAGATGGGTGTCAAAGTATTATTTGTATCCATACAAGTAAAAGTGTTGATAATACTTGATATTTTCTCCCAACAAAGTTACAAAAACATTTGCCACTTCTTCTCATCTTCCACTTTTTTTATTTTTCTATTTTTGCTTTTGTTTGTTGGCATCAAACTTATTCCACTTGATTATGTAGTTGTCCTTCTATTCTGCCACGTGTCTTCCCTTTTTTATTAGGTTTTGAAATATTACCACCAACTTTCATAATGAAAAAATGAACCCTTCCCCTCAGCCCCAACCCCACTCTTTACCTTTTCTTAATCACCACTCTTTCTATTTCTCTCTCTCAACTCTCAATTCTCAACTCTCAACTGTATTTATATTCTGATTACCACCAAAGTTCTTAAAACCCACATTTCCATATATTTTTCCAAATGAAGGAGGAATCAGTAAGCAACATGGTGAAGCAGATGGGAAATGCTTTAAGAAGTATGGTGAAAAGAAAAGCTCGTGCTCTTAAAGCTCGTCTAATAATTTACTCATTGTTAGCTCAATCAAATTTCTTTGTTTCTTCCTCTATTCCTTTAACAACAATCTCTACTCATCATCACAATCAACAACATTCTCAGTTACAAGCAGTAGTTGAAGATCATCAAGTTGCTGAAACACAGCAAGAAACAGAGCGAGAAACAGGGGTGTGTACAAAGTATGAAGAAGCAGAGGCAGAAGCAGAAGCACCAGCAAGTGGTTCGGTGATTGAGATGGTGAAGAATTCAAAGGAGAAAGCTGGTGAAGAGTTTAGTCTTGAAAAGGATATTGATCATGTTGCTGATTTGTTCATCAGAAATTTTCATCAGCAGATGAGGATGCAGAAGCAGAATTCTCTTAACAGATCTCACCAAGAACTGCTTTTTCGTTGAACCCTCCGATTCTTTTTCTTTTTTCGAGGCTTATGATTGTGCAGTGGAAATCCAATTATGTACGTTTGGGAATTGGGATGGAAATTGGTAACTTATCCACGGACCACGTTGTTGGGTTCAGATCGGCAACATAAGCACTACTCTGCTTCATGTTCTTACTTGCTTCTTGTTTTTTTCTTTTATCATATTCAATCAATTGCTATTCACACTATAATTCAATAAACTTTTGTATATATTTTGTATTCATGGGCTAATACTTTGGCTCTTGTATCTAGCTGTTCAATTAACCTAACACTTTGTATAATTCAATCCAAATTATAATTTTGGATTGAGTTGGATTAGGTTAAAAAAAGTTGTTATTTGTTGGGTTGAAAAGTTTCATTTTCCTACCCAGCCATGCTTCTATGTGGATTTTGTAGATTGAAACTATCTAAAGTTTATGATTCCAATTCAATTGAAATTTTTAATATATATATATATATATATTTTTTAATTTCTTAAATGAAAACACCAAGAAATG ATGAAGGAGGAATCAGTAAGCAACATGGTGAAGCAGATGGGAAATGCTTTAAGAAGTATGGTGAAAAGAAAAGCTCGTGCTCTTAAAGCTCGTCTAATAATTTACTCATTGTTAGCTCAATCAAATTTCTTTGTTTCTTCCTCTATTCCTTTAACAACAATCTCTACTCATCATCACAATCAACAACATTCTCAGTTACAAGCAGTAGTTGAAGATCATCAAGTTGCTGAAACACAGCAAGAAACAGAGCGAGAAACAGGGGTGTGTACAAAGTATGAAGAAGCAGAGGCAGAAGCAGAAGCACCAGCAAGTGGTTCGGTGATTGAGATGGTGAAGAATTCAAAGGAGAAAGCTGGTGAAGAGTTTAGTCTTGAAAAGGATATTGATCATGTTGCTGATTTGTTCATCAGAAATTTTCATCAGCAGATGAGGATGCAGAAGCAGAATTCTCTTAACAGATCTCACCAAGAACTGCTTTTTCGTTGA ATGAAGGAGGAATCAGTAAGCAACATGGTGAAGCAGATGGGAAATGCTTTAAGAAGTATGGTGAAAAGAAAAGCTCGTGCTCTTAAAGCTCGTCTAATAATTTACTCATTGTTAGCTCAATCAAATTTCTTTGTTTCTTCCTCTATTCCTTTAACAACAATCTCTACTCATCATCACAATCAACAACATTCTCAGTTACAAGCAGTAGTTGAAGATCATCAAGTTGCTGAAACACAGCAAGAAACAGAGCGAGAAACAGGGGTGTGTACAAAGTATGAAGAAGCAGAGGCAGAAGCAGAAGCACCAGCAAGTGGTTCGGTGATTGAGATGGTGAAGAATTCAAAGGAGAAAGCTGGTGAAGAGTTTAGTCTTGAAAAGGATATTGATCATGTTGCTGATTTGTTCATCAGAAATTTTCATCAGCAGATGAGGATGCAGAAGCAGAATTCTCTTAACAGATCTCACCAAGAACTGCTTTTTCGTTGA MKEESVSNMVKQMGNALRSMVKRKARALKARLIIYSLLAQSNFFVSSSIPLTTISTHHHNQQHSQLQAVVEDHQVAETQQETERETGVCTKYEEAEAEAEAPASGSVIEMVKNSKEKAGEEFSLEKDIDHVADLFIRNFHQQMRMQKQNSLNRSHQELLFR
BLAST of CsaV3_3G020070 vs. NCBI nr
Match: XP_011651332.1 (PREDICTED: uncharacterized protein LOC105434868 [Cucumis sativus] >KGN57686.1 hypothetical protein Csa_3G252450 [Cucumis sativus]) HSP 1 Score: 278.5 bits (711), Expect = 1.5e-71 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. NCBI nr
Match: XP_008450196.1 (PREDICTED: uncharacterized protein LOC103491856 [Cucumis melo]) HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62 Identity = 148/161 (91.93%), Postives = 153/161 (95.03%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. NCBI nr
Match: XP_023531487.1 (uncharacterized protein LOC111793710 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 150.6 bits (379), Expect = 4.6e-33 Identity = 105/185 (56.76%), Postives = 115/185 (62.16%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. NCBI nr
Match: XP_022989728.1 (uncharacterized protein LOC111486727 [Cucurbita maxima]) HSP 1 Score: 149.4 bits (376), Expect = 1.0e-32 Identity = 104/181 (57.46%), Postives = 113/181 (62.43%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. NCBI nr
Match: XP_022928439.1 (uncharacterized protein LOC111435250 [Cucurbita moschata]) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 112/177 (63.28%), Postives = 123/177 (69.49%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. TAIR10
Match: AT5G13880.1 (unknown protein) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11 Identity = 65/176 (36.93%), Postives = 80/176 (45.45%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. TAIR10
Match: AT5G47920.1 (unknown protein) HSP 1 Score: 65.1 bits (157), Expect = 4.6e-11 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. TrEMBL
Match: tr|A0A0A0LCA7|A0A0A0LCA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G252450 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 9.7e-72 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. TrEMBL
Match: tr|A0A1S3BPP6|A0A1S3BPP6_CUCME (uncharacterized protein LOC103491856 OS=Cucumis melo OX=3656 GN=LOC103491856 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 8.2e-63 Identity = 148/161 (91.93%), Postives = 153/161 (95.03%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. TrEMBL
Match: tr|A0A2N9EB87|A0A2N9EB87_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4118 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 6.0e-13 Identity = 70/203 (34.48%), Postives = 96/203 (47.29%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. TrEMBL
Match: tr|A0A2P4MS09|A0A2P4MS09_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_35976 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 8.6e-12 Identity = 68/187 (36.36%), Postives = 89/187 (47.59%), Query Frame = 0
BLAST of CsaV3_3G020070 vs. TrEMBL
Match: tr|A0A1R3JUU1|A0A1R3JUU1_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_04201 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 8.6e-12 Identity = 69/193 (35.75%), Postives = 87/193 (45.08%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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