CmoCh11G015560 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGGAATCATTGAGCAACATGGTGAAGCAAATGGCCTGTGGGTTAAGGGCCATGGTGAAAAGAAAAGCTCGAGCCCTCAAAGCTCGCCTCATTATCTACTCATTGCTAGCTCAATCCAACTTCCTCGTCTCCTCAATCCCTTTATCCACGGTCACCCATCAACAAAATCAGTGCCAAATTCAAGCCGCCGACCTCGAAAAAGCTCAAGAACATCAGGGAGTAGTCGAAGAAGAAACAGGGGCCGAAACAGGGGAAGAAACAGGGGCAGAAACAGGGGAAGAAACAGGGGCAGAAACAGGGGAGTGGGCGGAGCTGGAAACAGAGGCGGCTGTCGGAAGAACAAATGGGTGGTCGGTGATTGAGATGGTGAAGAATTCGAAGGAGGAGGCCGGCGAGGAGTTCAGTTTAGAGAAGGATATTGATGATGTGGCTGATTTGTTCATACGGAACTTCCATAGCCAGATGAGGATGCAGAAGCAGAACTCTCTTAATAGATATCACAAAATGCTTTCTTCTTAA ATGAAGAAGGAATCATTGAGCAACATGGTGAAGCAAATGGCCTGTGGGTTAAGGGCCATGGTGAAAAGAAAAGCTCGAGCCCTCAAAGCTCGCCTCATTATCTACTCATTGCTAGCTCAATCCAACTTCCTCGTCTCCTCAATCCCTTTATCCACGGTCACCCATCAACAAAATCAGTGCCAAATTCAAGCCGCCGACCTCGAAAAAGCTCAAGAACATCAGGGAGTAGTCGAAGAAGAAACAGGGGCCGAAACAGGGGAAGAAACAGGGGCAGAAACAGGGGAAGAAACAGGGGCAGAAACAGGGGAGTGGGCGGAGCTGGAAACAGAGGCGGCTGTCGGAAGAACAAATGGGTGGTCGGTGATTGAGATGGTGAAGAATTCGAAGGAGGAGGCCGGCGAGGAGTTCAGTTTAGAGAAGGATATTGATGATGTGGCTGATTTGTTCATACGGAACTTCCATAGCCAGATGAGGATGCAGAAGCAGAACTCTCTTAATAGATATCACAAAATGCTTTCTTCTTAA ATGAAGAAGGAATCATTGAGCAACATGGTGAAGCAAATGGCCTGTGGGTTAAGGGCCATGGTGAAAAGAAAAGCTCGAGCCCTCAAAGCTCGCCTCATTATCTACTCATTGCTAGCTCAATCCAACTTCCTCGTCTCCTCAATCCCTTTATCCACGGTCACCCATCAACAAAATCAGTGCCAAATTCAAGCCGCCGACCTCGAAAAAGCTCAAGAACATCAGGGAGTAGTCGAAGAAGAAACAGGGGCCGAAACAGGGGAAGAAACAGGGGCAGAAACAGGGGAAGAAACAGGGGCAGAAACAGGGGAGTGGGCGGAGCTGGAAACAGAGGCGGCTGTCGGAAGAACAAATGGGTGGTCGGTGATTGAGATGGTGAAGAATTCGAAGGAGGAGGCCGGCGAGGAGTTCAGTTTAGAGAAGGATATTGATGATGTGGCTGATTTGTTCATACGGAACTTCCATAGCCAGATGAGGATGCAGAAGCAGAACTCTCTTAATAGATATCACAAAATGCTTTCTTCTTAA
BLAST of CmoCh11G015560 vs. TrEMBL
Match: A0A0A0LCA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G252450 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 5.9e-37 Identity = 115/174 (66.09%), Postives = 125/174 (71.84%), Query Frame = 1
BLAST of CmoCh11G015560 vs. TrEMBL
Match: A0A067LBM0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26908 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.2e-11 Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 1
BLAST of CmoCh11G015560 vs. TrEMBL
Match: B9IA29_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s13610g PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.2e-11 Identity = 72/192 (37.50%), Postives = 102/192 (53.12%), Query Frame = 1
BLAST of CmoCh11G015560 vs. TrEMBL
Match: A0A0D2RG29_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G157900 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.7e-10 Identity = 74/213 (34.74%), Postives = 102/213 (47.89%), Query Frame = 1
BLAST of CmoCh11G015560 vs. TrEMBL
Match: A0A059BDZ9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01911 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09 Identity = 70/192 (36.46%), Postives = 95/192 (49.48%), Query Frame = 1
BLAST of CmoCh11G015560 vs. TAIR10
Match: AT5G13880.1 (AT5G13880.1 unknown protein) HSP 1 Score: 60.1 bits (144), Expect = 1.6e-09 Identity = 65/178 (36.52%), Postives = 88/178 (49.44%), Query Frame = 1
BLAST of CmoCh11G015560 vs. TAIR10
Match: AT5G47920.1 (AT5G47920.1 unknown protein) HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08 Identity = 62/183 (33.88%), Postives = 83/183 (45.36%), Query Frame = 1
BLAST of CmoCh11G015560 vs. NCBI nr
Match: gi|778680512|ref|XP_011651332.1| (PREDICTED: uncharacterized protein LOC105434868 [Cucumis sativus]) HSP 1 Score: 162.2 bits (409), Expect = 8.4e-37 Identity = 115/174 (66.09%), Postives = 125/174 (71.84%), Query Frame = 1
BLAST of CmoCh11G015560 vs. NCBI nr
Match: gi|659098554|ref|XP_008450196.1| (PREDICTED: uncharacterized protein LOC103491856 [Cucumis melo]) HSP 1 Score: 157.9 bits (398), Expect = 1.6e-35 Identity = 111/174 (63.79%), Postives = 122/174 (70.11%), Query Frame = 1
BLAST of CmoCh11G015560 vs. NCBI nr
Match: gi|743870868|ref|XP_011033698.1| (PREDICTED: uncharacterized protein LOC105132099 [Populus euphratica]) HSP 1 Score: 77.0 bits (188), Expect = 3.6e-11 Identity = 75/205 (36.59%), Postives = 110/205 (53.66%), Query Frame = 1
BLAST of CmoCh11G015560 vs. NCBI nr
Match: gi|802564844|ref|XP_012067403.1| (PREDICTED: uncharacterized protein LOC105630244 [Jatropha curcas]) HSP 1 Score: 76.3 bits (186), Expect = 6.1e-11 Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 1
BLAST of CmoCh11G015560 vs. NCBI nr
Match: gi|224128702|ref|XP_002320398.1| (hypothetical protein POPTR_0014s13610g [Populus trichocarpa]) HSP 1 Score: 76.3 bits (186), Expect = 6.1e-11 Identity = 72/192 (37.50%), Postives = 102/192 (53.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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