CsaV3_3G007610 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G007610
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	UPF0565 protein C2orf69 homolog
Location	chr3 : 6720102 .. 6721847 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAATGTGGAGTACATCATTCCCAAAATTGGATGACACAATACGAACATTCTACGGACTTCAATTTAATCTAAAATAGGGGGGAAAGCAGAAATTGTAATGTTTCTGTAGCCGATTCAATTGAAGCATCTTGTTGACGATAACGATGGATCGTTGGAATGGAATTTTGAAGGTTCCATTGAATTCAAACAGCCGCAAGTTTTATAGAGTTGCGGTGTCACTCTGCCTTTCCCCAACCTCCAAAACATTGACGGTAAGTTTTGAAATATTCTAATTCCCCTGAACTACACACCGTCCTTTCAGATTGAGGGAAATACTGTATACTGTTTTGTTAGGTTCCTCGTGGAAACGCCATCTTCTTTAATGGGGATCGGGTTGAAGGGACGGGAAATCCAGTGATTGAGAGGTTGTCTAATCTACAGAACATAGCTGAAATTTTAGTTTCGAAATTTGGAGATTCCACCAATGCATGGGTTGTCGAGGCTTCTGATTTCAATGGAGCTTTTGCTATATATCAGGATTTTATACCTTCTCTCAATCGGTGGGGTGAACCAAAATCATATACTCCAAATGGGTTCCCTGCTTCACTGTCAACCGTTTCACTTTTGGGAAGTTGCTACAATGAGGTATTGTCTAAATGTGTCTTTTGAGTCAACAACATAGGGTGTGGTTTATTTGAATATATAACTATTTGGTTTATTAGTGGAATGGTATGCCGAAACTGGTTCCGTTACGCTCAACGAAGATTCGAATCCTCACTTCTTGATTAATGGCGTATGGCTAAACCAGAAAAGATTCGACTCCATGACCTCTTAGCGGTGATGTATGCCTAAACCTGTTGAGCTACATGGTTGAAAGATTCAAATATTTAACCACTTGGTCGAGGGTGTGTGTAAGGCTAAACTAACTAAGCTATGTATGCCTACACCTGCTGAGCTATGATTTAGATATTTGAATCTCCCACCTTTGATCGAGGGTGTGTATGTCTAGATTAGCTAAGCTATGGATGCCAAAACCTGTTGTACTATGGTTGAGAGATTCAAATCTATTAGCTTTGGTTGAAAGTCTGTATGTCTAAACTAATTAAGCTATGCTTATGTTGACTGATTGCTTGCGATTTTGAGGTGAACTCATGCACTTAGTTGTGGATTTGGCAGGTAAAGAAGATAGTTTCTAGGGGAAAACCAAGATCACAGGAAACCGCCATATCTACACTGAGCTGCTGCACCCCCGAAACAATCATTCTTGGATTTAGCAAGGGTGGTACTGTGGTTAACCAGCTAGTTACTGAACTTGGCTCCAAGGACTTGATGGCTGCTGATGAAAATCTACCTCTTTCTAAGCAAGAATCGGGTGTTGAATGTTCTAAACTTGATGAGATTCAGTTCGTACCAACTACAGGACAAAGCTTTTTGAAAAGCATAACAGAGATTCATTATGTGGATGTTGGGTTGAACTCCCATGGTGCATACCTTACAGACCCTGAGGTAATCAAAAGAATCTCCAGCAGTCTTATTCAGGAGTCAAGAGGAATCCGTTTTGTTCTTCATGGTACTCCAAGACAATGGTGTGATCGCAGAAGAGTTTGGATACGAGATGAGAAGGAAAAAATGAGGAGTTTTCTTGAATCTGAAGCTCTGAGAAGTGGAGGAAACTTGAAGGTTAATGAGAAATTTTATTTTGCTGATAGACCTGCGGACATGCAGATGCATTTTGAAATAATTGAAAAGTTGGATGTTTGTTGA

mRNA sequence

ATGGATCGTTGGAATGGAATTTTGAAGGTTCCATTGAATTCAAACAGCCGCAAGTTTTATAGAGTTGCGGTGTCACTCTGCCTTTCCCCAACCTCCAAAACATTGACGGTTCCTCGTGGAAACGCCATCTTCTTTAATGGGGATCGGGTTGAAGGGACGGGAAATCCAGTGATTGAGAGGTTGTCTAATCTACAGAACATAGCTGAAATTTTAGTTTCGAAATTTGGAGATTCCACCAATGCATGGGTTGTCGAGGCTTCTGATTTCAATGGAGCTTTTGCTATATATCAGGATTTTATACCTTCTCTCAATCGGTGGGGTGAACCAAAATCATATACTCCAAATGGGTTCCCTGCTTCACTGTCAACCGTTTCACTTTTGGGAAGTTGCTACAATGAGGTAAAGAAGATAGTTTCTAGGGGAAAACCAAGATCACAGGAAACCGCCATATCTACACTGAGCTGCTGCACCCCCGAAACAATCATTCTTGGATTTAGCAAGGGTGGTACTGTGGTTAACCAGCTAGTTACTGAACTTGGCTCCAAGGACTTGATGGCTGCTGATGAAAATCTACCTCTTTCTAAGCAAGAATCGGGTGTTGAATGTTCTAAACTTGATGAGATTCAGTTCGTACCAACTACAGGACAAAGCTTTTTGAAAAGCATAACAGAGATTCATTATGTGGATGTTGGGTTGAACTCCCATGGTGCATACCTTACAGACCCTGAGGTAATCAAAAGAATCTCCAGCAGTCTTATTCAGGAGTCAAGAGGAATCCGTTTTGTTCTTCATGGTACTCCAAGACAATGGTGTGATCGCAGAAGAGTTTGGATACGAGATGAGAAGGAAAAAATGAGGAGTTTTCTTGAATCTGAAGCTCTGAGAAGTGGAGGAAACTTGAAGGTTAATGAGAAATTTTATTTTGCTGATAGACCTGCGGACATGCAGATGCATTTTGAAATAATTGAAAAGTTGGATGTTTGTTGA

Coding sequence (CDS)

ATGGATCGTTGGAATGGAATTTTGAAGGTTCCATTGAATTCAAACAGCCGCAAGTTTTATAGAGTTGCGGTGTCACTCTGCCTTTCCCCAACCTCCAAAACATTGACGGTTCCTCGTGGAAACGCCATCTTCTTTAATGGGGATCGGGTTGAAGGGACGGGAAATCCAGTGATTGAGAGGTTGTCTAATCTACAGAACATAGCTGAAATTTTAGTTTCGAAATTTGGAGATTCCACCAATGCATGGGTTGTCGAGGCTTCTGATTTCAATGGAGCTTTTGCTATATATCAGGATTTTATACCTTCTCTCAATCGGTGGGGTGAACCAAAATCATATACTCCAAATGGGTTCCCTGCTTCACTGTCAACCGTTTCACTTTTGGGAAGTTGCTACAATGAGGTAAAGAAGATAGTTTCTAGGGGAAAACCAAGATCACAGGAAACCGCCATATCTACACTGAGCTGCTGCACCCCCGAAACAATCATTCTTGGATTTAGCAAGGGTGGTACTGTGGTTAACCAGCTAGTTACTGAACTTGGCTCCAAGGACTTGATGGCTGCTGATGAAAATCTACCTCTTTCTAAGCAAGAATCGGGTGTTGAATGTTCTAAACTTGATGAGATTCAGTTCGTACCAACTACAGGACAAAGCTTTTTGAAAAGCATAACAGAGATTCATTATGTGGATGTTGGGTTGAACTCCCATGGTGCATACCTTACAGACCCTGAGGTAATCAAAAGAATCTCCAGCAGTCTTATTCAGGAGTCAAGAGGAATCCGTTTTGTTCTTCATGGTACTCCAAGACAATGGTGTGATCGCAGAAGAGTTTGGATACGAGATGAGAAGGAAAAAATGAGGAGTTTTCTTGAATCTGAAGCTCTGAGAAGTGGAGGAAACTTGAAGGTTAATGAGAAATTTTATTTTGCTGATAGACCTGCGGACATGCAGATGCATTTTGAAATAATTGAAAAGTTGGATGTTTGTTGA

Protein sequence

MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIERLSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPASLSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELGSKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLTDPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNLKVNEKFYFADRPADMQMHFEIIEKLDVC

Homology

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BLAST of CsaV3_3G007610 vs. NCBI nr
Match: XP_011650653.1 (PREDICTED: UPF0565 protein C2orf69 homolog [Cucumis sativus] >KGN56378.1 hypothetical protein Csa_3G118130 [Cucumis sativus])

HSP 1 Score: 667.2 bits (1720), Expect = 3.0e-188
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER
Sbjct: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS
Sbjct: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120

Query: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG
Sbjct: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT
Sbjct: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL
Sbjct: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 329
           KVNEKFYFADRPADMQMHFEIIEKLDVC
Sbjct: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 328

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BLAST of CsaV3_3G007610 vs. NCBI nr
Match: XP_008437824.1 (PREDICTED: UPF0565 protein C2orf69 homolog [Cucumis melo])

HSP 1 Score: 628.6 bits (1620), Expect = 1.2e-176
Identity = 310/328 (94.51%), Postives = 315/328 (96.04%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRWNGILKVPL SNSRKFYRVAVSLCLSPTSKTLTVPR NAIFFNGDRVEGTGNPVIE 
Sbjct: 1   MDRWNGILKVPLRSNSRKFYRVAVSLCLSPTSKTLTVPRANAIFFNGDRVEGTGNPVIEG 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS
Sbjct: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120

Query: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           LSTVSLLGSCYNEVKKIVSRGKP SQET I TLS CTPET+ILGFSKGGTVVNQLVTELG
Sbjct: 121 LSTVSLLGSCYNEVKKIVSRGKPGSQETTIPTLSGCTPETVILGFSKGGTVVNQLVTELG 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDL+AADENLPLSKQESGVECSKLDE QF+PTT  SFLKSITEIHYVDVGLN+HGAYLT
Sbjct: 181 SKDLIAADENLPLSKQESGVECSKLDENQFIPTTEHSFLKSITEIHYVDVGLNTHGAYLT 240

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKE M SFLESEALRSGGNL
Sbjct: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKETMTSFLESEALRSGGNL 300

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 329
           +V EKFYFADRPADMQMHFEIIEKLDVC
Sbjct: 301 QVYEKFYFADRPADMQMHFEIIEKLDVC 328

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BLAST of CsaV3_3G007610 vs. NCBI nr
Match: XP_022924396.1 (uncharacterized protein LOC111431905 [Cucurbita moschata])

HSP 1 Score: 559.7 bits (1441), Expect = 6.7e-156
Identity = 272/328 (82.93%), Postives = 293/328 (89.33%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           M+RW GILKVPL+  S KFYRVA SLCLSPTSKTLT+P  NAI FNGDRVEGTGNPVIER
Sbjct: 1   MERWCGILKVPLHPQSHKFYRVAASLCLSPTSKTLTMPHANAILFNGDRVEGTGNPVIER 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+LQNIA+ILVSKFGDSTNAWV+EASDFNG FAIY DF+ SLNRWGEPKSYT NGFPAS
Sbjct: 61  LSDLQNIADILVSKFGDSTNAWVIEASDFNGPFAIYHDFMHSLNRWGEPKSYTANGFPAS 120

Query: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           +ST+SLLGSCY+EVKKI+SR    S E  ISTL C TP+TIILGFSKGGTVVNQLV ELG
Sbjct: 121 VSTLSLLGSCYSEVKKIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVVNQLVAELG 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDL+AADEN P SKQ  GVECSKLDE+QF+P T QSFLKSITEIHYVDVGLNSHGAY T
Sbjct: 181 SKDLIAADENPPHSKQAPGVECSKLDEVQFIPNTEQSFLKSITEIHYVDVGLNSHGAYFT 240

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRIS+SL+QESRGIRF+LHGTPRQWCD RRVWIRDEKEKM S LESEA RSGG L
Sbjct: 241 DPEVIKRISNSLVQESRGIRFILHGTPRQWCDSRRVWIRDEKEKMSSLLESEARRSGGRL 300

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 329
           +V E+F+FADRPADMQMHFEIIEKLDVC
Sbjct: 301 QVCERFHFADRPADMQMHFEIIEKLDVC 328

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BLAST of CsaV3_3G007610 vs. NCBI nr
Match: XP_023527404.1 (uncharacterized protein LOC111790644 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 559.3 bits (1440), Expect = 8.7e-156
Identity = 273/328 (83.23%), Postives = 292/328 (89.02%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           M+RW GILKVPL+  S KFYRVA SLCLSPTSKTLT P  NAI FNGDRVEGTGNPVIER
Sbjct: 46  MERWCGILKVPLHPQSHKFYRVAASLCLSPTSKTLTTPHANAILFNGDRVEGTGNPVIER 105

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+ QNIA+ILVSKFGDSTNAWV+EASDFNG FAIY DFIPSLNRWGEPKSYT NGFPAS
Sbjct: 106 LSDPQNIADILVSKFGDSTNAWVIEASDFNGPFAIYHDFIPSLNRWGEPKSYTANGFPAS 165

Query: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           +ST+SLLGSCY+EVKKI+SR    S E  ISTL C TP+TIILGFSKGGTVVNQLV ELG
Sbjct: 166 VSTLSLLGSCYSEVKKIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVVNQLVAELG 225

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDL+AADEN P SKQ  GVECSKLDE+QF+P T QSFLKSITEIHYVDVGLNS GAY T
Sbjct: 226 SKDLIAADENPPHSKQAPGVECSKLDEVQFIPNTEQSFLKSITEIHYVDVGLNSQGAYFT 285

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRIS+SL+QESRGIRFVLHGTPRQWCD RRVWIRDEK+KM SFLESEA RSGG L
Sbjct: 286 DPEVIKRISNSLVQESRGIRFVLHGTPRQWCDSRRVWIRDEKDKMLSFLESEARRSGGRL 345

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 329
           +V E+F+FADRPADMQMHFEIIEKLDVC
Sbjct: 346 QVCERFHFADRPADMQMHFEIIEKLDVC 373

[Close]

BLAST of CsaV3_3G007610 vs. NCBI nr
Match: XP_022979247.1 (uncharacterized protein LOC111479029 [Cucurbita maxima])

HSP 1 Score: 547.0 bits (1408), Expect = 4.5e-152
Identity = 268/328 (81.71%), Postives = 288/328 (87.80%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           M+RW GILKVPL+    +FYRVA SLCLSPTSKTLT+P  NAI FNGDRVEGTGNPVIER
Sbjct: 61  MERWCGILKVPLHPQCHRFYRVAASLCLSPTSKTLTMPHANAILFNGDRVEGTGNPVIER 120

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+LQNIA+ILVSKFGDSTNAWV+EASDFNG FAIY DFIPSLNRWGEPKSYT NGFPAS
Sbjct: 121 LSDLQNIADILVSKFGDSTNAWVIEASDFNGPFAIYHDFIPSLNRWGEPKSYTANGFPAS 180

Query: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           +ST+SLLGSCY+EVKKI+SR    S E  ISTL C TP+TIILGFSKGGTV NQLV ELG
Sbjct: 181 VSTLSLLGSCYSEVKKIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVANQLVAELG 240

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDL+AADEN P SKQ  GVECSKLDE QF+P T QSFLKSITEIHYVDVGLNS GAY T
Sbjct: 241 SKDLIAADENPPHSKQAPGVECSKLDEDQFIPNTEQSFLKSITEIHYVDVGLNSQGAYFT 300

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPE IKRIS+SL+QESRGIRFVLHGTPRQW D RRVWIRDEK+KM S LESEA RSGG L
Sbjct: 301 DPEAIKRISNSLVQESRGIRFVLHGTPRQWGDSRRVWIRDEKDKMLSLLESEARRSGGRL 360

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 329
           +V E+F+FADRPADMQMHFEIIEKLDVC
Sbjct: 361 QVCERFHFADRPADMQMHFEIIEKLDVC 388

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BLAST of CsaV3_3G007610 vs. TAIR10
Match: AT2G44850.1 (unknown protein)

HSP 1 Score: 319.3 bits (817), Expect = 2.7e-87
Identity = 160/291 (54.98%), Postives = 213/291 (73.20%), Query Frame = 0


Query: 37  VPRGNAIFFNGDRVEGTGNPVIERLSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIY 96
           VP  NAIFF+GD+V+ TGN VIERL +LQ +AEI+VSKFG+S NAWVVEAS FNG FAIY
Sbjct: 117 VPSANAIFFHGDKVQDTGNHVIERLYDLQKVAEIIVSKFGNSVNAWVVEASVFNGPFAIY 176

Query: 97  QDFIPSLNRWGEPKSYTPNGFPASLSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCC 156
           +DF+PS+N  G PKSY+P GFPAS S VSLL SC +EV K    G        I+++  C
Sbjct: 177 KDFVPSVNHMGAPKSYSPVGFPASSSIVSLLSSCLHEVLK---EGTDVCLIDQIASVHHC 236

Query: 157 TPETIILGFSKGGTVVNQLVTELGSKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQ 216
            P+TI+LGFSKGG V+NQL++E+ S D   A  +  + ++ +    S+ ++IQ +P + +
Sbjct: 237 -PKTIVLGFSKGGVVMNQLMSEISSLDTNFAKTSSAMVEEST----SQHEKIQIIPASKE 296

Query: 217 SFLKSITEIHYVDVGLNSHGAYLTDPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRV 276
           SFL SI+E+HY+DVGLNS GAY+TD  V++RIS  L + +  +R V+HGTPRQWCD  R 
Sbjct: 297 SFLNSISEVHYIDVGLNSSGAYITDHNVVQRISQRLARGADSLRIVIHGTPRQWCDELRG 356

Query: 277 WIRDEKEKMRSFLESEALRSGGNLKVNEKFYFADRPADMQMHFEIIEKLDV 328
           WIR EK+++   L++E   SGG L+V E+FYF+DR AD+QMHFEII+ +DV
Sbjct: 357 WIRKEKDELVRLLKAETENSGGKLQVCERFYFSDRLADLQMHFEIIDAMDV 399

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BLAST of CsaV3_3G007610 vs. TrEMBL
Match: tr|A0A0A0L3P6|A0A0A0L3P6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118130 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 2.0e-188
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER
Sbjct: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS
Sbjct: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120

Query: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG
Sbjct: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT
Sbjct: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL
Sbjct: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 329
           KVNEKFYFADRPADMQMHFEIIEKLDVC
Sbjct: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 328

[Close]

BLAST of CsaV3_3G007610 vs. TrEMBL
Match: tr|A0A1S3AV17|A0A1S3AV17_CUCME (UPF0565 protein C2orf69 homolog OS=Cucumis melo OX=3656 GN=LOC103483140 PE=4 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 7.7e-177
Identity = 310/328 (94.51%), Postives = 315/328 (96.04%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRWNGILKVPL SNSRKFYRVAVSLCLSPTSKTLTVPR NAIFFNGDRVEGTGNPVIE 
Sbjct: 1   MDRWNGILKVPLRSNSRKFYRVAVSLCLSPTSKTLTVPRANAIFFNGDRVEGTGNPVIEG 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS
Sbjct: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120

Query: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           LSTVSLLGSCYNEVKKIVSRGKP SQET I TLS CTPET+ILGFSKGGTVVNQLVTELG
Sbjct: 121 LSTVSLLGSCYNEVKKIVSRGKPGSQETTIPTLSGCTPETVILGFSKGGTVVNQLVTELG 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDL+AADENLPLSKQESGVECSKLDE QF+PTT  SFLKSITEIHYVDVGLN+HGAYLT
Sbjct: 181 SKDLIAADENLPLSKQESGVECSKLDENQFIPTTEHSFLKSITEIHYVDVGLNTHGAYLT 240

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKE M SFLESEALRSGGNL
Sbjct: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKETMTSFLESEALRSGGNL 300

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 329
           +V EKFYFADRPADMQMHFEIIEKLDVC
Sbjct: 301 QVYEKFYFADRPADMQMHFEIIEKLDVC 328

[Close]

BLAST of CsaV3_3G007610 vs. TrEMBL
Match: tr|A0A2I4HEB4|A0A2I4HEB4_9ROSI (uncharacterized protein LOC109016560 isoform X1 OS=Juglans regia OX=51240 GN=LOC109016560 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.4e-114
Identity = 208/328 (63.41%), Postives = 248/328 (75.61%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRW G+LKVPL S+S  +YRVA SLCLSPTSKTL VP  NAIFFNGDRVEGTGN VIER
Sbjct: 8   MDRWCGVLKVPLCSDSGPYYRVAASLCLSPTSKTLAVPSANAIFFNGDRVEGTGNSVIER 67

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+ + IA +LVSKFG S NAWV E+S FNG FA+Y+DFIPS+NRWGEPKSY+P GFPAS
Sbjct: 68  LSDPKTIAGLLVSKFGTSVNAWVFESSIFNGPFAVYKDFIPSVNRWGEPKSYSPLGFPAS 127

Query: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
            ST+SLL +C  EVK ++SR +     T +  L    P+T+ILGFSKGGTV+NQL+TEL 
Sbjct: 128 RSTISLLSNCLKEVKNVISRIEGEQHPTNVPALHFSQPKTLILGFSKGGTVINQLITELS 187

Query: 181 SKDLMAADENLPLSKQESGVECSKLDE-IQFVPTTGQSFLKSITEIHYVDVGLNSHGAYL 240
           S D+M         +Q  G +CS   E I+ +P   ++ L SITE+HYVDVGLNS GAYL
Sbjct: 188 SSDVMLTGNKSYTEEQSRGGQCSNFSEAIKIIPDMEETLLNSITEVHYVDVGLNSSGAYL 247

Query: 241 TDPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGN 300
           TD  VI+RI   + Q ++GIRF+LHGTPRQWCD RR WIR EK+K+   LES A RSGG 
Sbjct: 248 TDHAVIERIYKRVTQGAKGIRFLLHGTPRQWCDSRRNWIRTEKDKLVHMLESAARRSGGK 307

Query: 301 LKVNEKFYFADRPADMQMHFEIIEKLDV 328
           L+V E+FY ADRP +MQMHFEIIEKL+V
Sbjct: 308 LQVCERFYCADRPPNMQMHFEIIEKLNV 335

[Close]

BLAST of CsaV3_3G007610 vs. TrEMBL
Match: tr|A0A2I4HEB5|A0A2I4HEB5_9ROSI (uncharacterized protein LOC109016560 isoform X2 OS=Juglans regia OX=51240 GN=LOC109016560 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.4e-114
Identity = 208/328 (63.41%), Postives = 248/328 (75.61%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRW G+LKVPL S+S  +YRVA SLCLSPTSKTL VP  NAIFFNGDRVEGTGN VIER
Sbjct: 1   MDRWCGVLKVPLCSDSGPYYRVAASLCLSPTSKTLAVPSANAIFFNGDRVEGTGNSVIER 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+ + IA +LVSKFG S NAWV E+S FNG FA+Y+DFIPS+NRWGEPKSY+P GFPAS
Sbjct: 61  LSDPKTIAGLLVSKFGTSVNAWVFESSIFNGPFAVYKDFIPSVNRWGEPKSYSPLGFPAS 120

Query: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
            ST+SLL +C  EVK ++SR +     T +  L    P+T+ILGFSKGGTV+NQL+TEL 
Sbjct: 121 RSTISLLSNCLKEVKNVISRIEGEQHPTNVPALHFSQPKTLILGFSKGGTVINQLITELS 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDE-IQFVPTTGQSFLKSITEIHYVDVGLNSHGAYL 240
           S D+M         +Q  G +CS   E I+ +P   ++ L SITE+HYVDVGLNS GAYL
Sbjct: 181 SSDVMLTGNKSYTEEQSRGGQCSNFSEAIKIIPDMEETLLNSITEVHYVDVGLNSSGAYL 240

Query: 241 TDPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGN 300
           TD  VI+RI   + Q ++GIRF+LHGTPRQWCD RR WIR EK+K+   LES A RSGG 
Sbjct: 241 TDHAVIERIYKRVTQGAKGIRFLLHGTPRQWCDSRRNWIRTEKDKLVHMLESAARRSGGK 300

Query: 301 LKVNEKFYFADRPADMQMHFEIIEKLDV 328
           L+V E+FY ADRP +MQMHFEIIEKL+V
Sbjct: 301 LQVCERFYCADRPPNMQMHFEIIEKLNV 328

[Close]

BLAST of CsaV3_3G007610 vs. TrEMBL
Match: tr|A0A2P4H5D1|A0A2P4H5D1_QUESU (Upf0565 protein OS=Quercus suber OX=58331 GN=CFP56_27173 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.9e-114
Identity = 207/328 (63.11%), Postives = 248/328 (75.61%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           M RW G+LKVPL  NS  +YRVA SLCLSPT+K L  P  NAIFFNGDR+EGTGNPVIER
Sbjct: 1   MGRWIGVLKVPLGLNSGNYYRVAASLCLSPTTKNLAEPSANAIFFNGDRIEGTGNPVIER 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+LQNIAEILVSKFG S NAWV+EAS FNG FA+Y+DFIPS+N+WGEPKSY+P G+PAS
Sbjct: 61  LSDLQNIAEILVSKFGGSINAWVIEASVFNGPFAVYKDFIPSVNQWGEPKSYSPTGYPAS 120

Query: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
            +TVSLL +C  EVKKI+   +      +IS      P+T ILGFSKGGTV+NQLVTEL 
Sbjct: 121 RTTVSLLSNCLEEVKKIIPGRQKEQSPASISASHLPQPKTFILGFSKGGTVLNQLVTELS 180

Query: 181 SKDLMAADENLPLSKQESGVECSKL-DEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYL 240
             D+     +    +Q +  + S   +EI+ +P T +  L SITEIHYVDVGLNS GAYL
Sbjct: 181 FSDVKFTGNSPHTEEQSTSNKHSNFTEEIKIIPNTEEGLLNSITEIHYVDVGLNSSGAYL 240

Query: 241 TDPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGN 300
           T+ + I+RIS  L Q  +GIRFVLHGTPRQWCD RR+WI +EK+K+   LESEA RSGG 
Sbjct: 241 TNHDAIERISKRLTQGGKGIRFVLHGTPRQWCDSRRIWILNEKDKLVHMLESEADRSGGK 300

Query: 301 LKVNEKFYFADRPADMQMHFEIIEKLDV 328
           L+V E+FYFA +P D+QMHFEIIEK+DV
Sbjct: 301 LQVCERFYFAKKPPDLQMHFEIIEKMDV 328

The following BLAST results are available for this feature:

BLAST of CsaV3_3G007610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650653.1	3.0e-188	100.00	PREDICTED: UPF0565 protein C2orf69 homolog [Cucumis sativus] >KGN56378.1 hypothe...	[more]
XP_008437824.1	1.2e-176	94.51	PREDICTED: UPF0565 protein C2orf69 homolog [Cucumis melo]	[more]
XP_022924396.1	6.7e-156	82.93	uncharacterized protein LOC111431905 [Cucurbita moschata]	[more]
XP_023527404.1	8.7e-156	83.23	uncharacterized protein LOC111790644 [Cucurbita pepo subsp. pepo]	[more]
XP_022979247.1	4.5e-152	81.71	uncharacterized protein LOC111479029 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G007610 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44850.1	2.7e-87	54.98	unknown protein	[more]

BLAST of CsaV3_3G007610 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G007610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3P6\|A0A0A0L3P6_CUCSA	2.0e-188	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118130 PE=4 SV=1	[more]
tr\|A0A1S3AV17\|A0A1S3AV17_CUCME	7.7e-177	94.51	UPF0565 protein C2orf69 homolog OS=Cucumis melo OX=3656 GN=LOC103483140 PE=4 SV=...	[more]
tr\|A0A2I4HEB4\|A0A2I4HEB4_9ROSI	1.4e-114	63.41	uncharacterized protein LOC109016560 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4HEB5\|A0A2I4HEB5_9ROSI	1.4e-114	63.41	uncharacterized protein LOC109016560 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2P4H5D1\|A0A2P4H5D1_QUESU	1.9e-114	63.11	Upf0565 protein OS=Quercus suber OX=58331 GN=CFP56_27173 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018881	UPF0565

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G007610.1	CsaV3_3G007610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018881	Uncharacterised protein family UPF0565	PFAM	PF10561	UPF0565	coord: 143..290 e-value: 4.5E-10 score: 39.1
IPR018881	Uncharacterised protein family UPF0565	PANTHER	PTHR31296	FAMILY NOT NAMED	coord: 23..327

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G007610	CSPI03G07480	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G007610	Cucsa.259670	Cucumber (Gy14) v1	cgycucB387
CsaV3_3G007610	CmaCh14G021410	Cucurbita maxima (Rimu)	cmacucB0291
CsaV3_3G007610	CmoCh14G022080	Cucurbita moschata (Rifu)	cmocucB0283
CsaV3_3G007610	Cp4.1LG03g16040	Cucurbita pepo (Zucchini)	cpecucB0759
CsaV3_3G007610	CsGy3G007600	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G007610	Carg17662	Silver-seed gourd	carcucB0153
CsaV3_3G007610	Cla021112	Watermelon (97103) v1	cucwmB239
CsaV3_3G007610	MELO3C005982	Melon (DHL92) v3.5.1	cucmeB236
CsaV3_3G007610	ClCG05G000440	Watermelon (Charleston Gray)	cucwcgB225
CsaV3_3G007610	MELO3C005982.2	Melon (DHL92) v3.6.1	cucmedB230
CsaV3_3G007610	Cla97C05G080430	Watermelon (97103) v2	cucwmbB206
CsaV3_3G007610	Bhi01G000406	Wax gourd	cucwgoB288

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G007610	Silver-seed gourd	carcucB1037
CsaV3_3G007610	Cucurbita maxima (Rimu)	cmacucB0965
CsaV3_3G007610	Cucurbita maxima (Rimu)	cmacucB0980
CsaV3_3G007610	Cucurbita moschata (Rifu)	cmocucB0953
CsaV3_3G007610	Cucurbita pepo (Zucchini)	cpecucB1058
CsaV3_3G007610	Bottle gourd (USVL1VR-Ls)	cuclsiB228