Carg17662 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17662
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	pentatricopeptide repeat-containing protein At5g15010, mitochondrial
Location	Cucurbita_argyrosperma_scaffold_119 : 703350 .. 707873 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATCAAAGTTTTGCGCATTGTCGCTTCTGAGTCATACATATTTCAGTTGCTCTTCTGTTAAATCCACCCAACATGTTGTGCGCAGAGTTCTTACCAGTGGTTTTAGTTCATGGCCTACTCGCATTCATACCGTCTACCCTACTACTGCATTGAACTCCAATGTTGGGGATCTTTTCTCCTCTGGCTTTTGTTCTCGCTATTATAGCTCTCCGGGTTCGAACTGCGATATTTTGAATATGCCTTCAGAAGAATCTAGTCAACATGCAGCCAATGATGATCATGTTAGTGACGACGATGATGATGATCGAGAAGAGCAGGAAGAGGATAACATGAACATTGAGCCATTGAACATCAATGACAAAGGTGTGATACGAGATGTGGATGCCATTATGGATATATTTCGTGGGTTTTGGAATGAAGATCGAATTCAAGTAAAGAATAAGCTTGAGCATTGCTGTATTAAGGTCTCAGGGGAGTTGGTAGTAGCAGTACTTTCTCGGATCCGTAATGATTGGGAAGCAGCATTCACTTTTTTTGTTTGGGCTGGTAAGCAGCCTGGCTATACCCACTCTATTCGTGAATATCATTCAATGATTTCAATTCTTGGGAAAATGAGGAAGTTTGACACGGCATGGGCCTTGATCGATGAGATGAGAGGAGGGACAACGGGCTCTTCTCTTGTGACACCTCAAACTCTACTAATCATGATTAGGAGATACTGTGCCGTTCATGATGTTGGTAAAGCTATAAATACCTTCCATGCTCATAAAAGATTCGGATTCAAAGTTGGACTAGAGGAATTTCAAAGCCTTCTCTCTGCCCTCTGCCGTTACAAAAATGTGAAGGATGCTGAATATTTACTCTTCTGCAACAAAGATGTGTTCCCGTTGAACACAAAGAGCTTCAATATTGTCCTCAATGGATGGTGCAATATAATTGGCAGTCTTCGCGATGCAGAGAGAATTTGGAGGGAGATGACGCAGAGGGGTATCGGTCATGATGCTGTCTCATATGCAAGTATAATTTCTTGTTACTCAAAACTTCGCAACCTTTATAGGGTGGTCAGGCTTTTTGACAATATGAAGCAAATGAAAATTGACCCTGATAGGAAAGTCTACAATGCAGTCATTCACGCTCTTGCCAAAGGTGGGCTTCTGAAAGAAGCTATCGATCTCATAAAAACAATGGAGGAGAAGGGCATTATTCCAAATGTTGTTACTTATAACTCGGTTATCAAACCTCTATGCAAGGCCCGGAAATTTGATGATGCTAGAGTGGTTTTTGAGGAGCTGTTGGAGCGGGGCCTCTGCCCGACAATTCAGACATATCATGCGTTCTTGAGATTCCTGAGAACGGAGGAAGAAATATTTGAGGTATTGGAGAAGATGAGAAGAATGGGGTGCAATCCAACCACTGAAACCTACATAATGTTGATCAGAAAATTTTGCCGATGGCGGCAGCTTGATATTGTTTCCAGAATATGGCATGAAATGAGTGAAAATGGAATTGGTCCTGATCGCAGCTCTTATATTGTCTTAATACACGGTCTCTTCTTGAATGGGAAACTAGAAGATGCATATAAATACTATTTGGAAATGAAGGAAAAAGAGTTGCTTCCTGAACCAAAGATAGATGAGGTACTAAAAGCTTGGCTTGCTGGTAAGCCAGTGATTCAAGGCTACATGAATGGTTCATCAGAGAATCCATCAGATTCTTCTGGGGAAGGCAAGAACTCGAACTCGAACTCGAACTCGAGCTCGAGCTCGAAATTGTTCCCCAAAAAAATTGATTTTCACAGACAACCTGAGATCAGAAAGGTTGCAAGAGATTCTGGTTTTTCATTTTGGAAGCAGTAAGATTTTGTAGTATATCTTATCCCTTCAACCTCGAGGATCGAATGCTTCGAGTGCACGACTTCAACCGTTCATCTGAGTTCACTTCAGGTGCCTTCAACCTCTCCTGTCATCTCACAATGATCCTTTTTCCTTCCATTACACCGCCAATGCTTTTGTGCAGTTCAAGTGCGGAAGACCGTTGCGAAGCCTAGTAAACTTTTTTACACATGCCCGGATCCTAAGACGTTAGAGGTACTAATCTTCAGACCGAACATGTTTATTTGCTTTTGTAGCGATGTCGATATATGAGCTGTTTGAAATCGGCCATAGCAAGGCAAAACTTGGCCATTTTATTTATTATGTACCTCAAATCCCGTAGCATTTGAATCAAATATCCAAGCACATGAAGCCATGCTTTGGTAAACATCACTCGATGATAGCGACATTATTCAAAGCTCCCAACTAATTCTTTCCATTAAAAGGTTGGATATAAAATAAATTATTGTTTTATTTATATATTGCACACACTAATTACTCAAATAGAATCAATAAGATTAATTTGTTTTAAGTTAATATGGTAAATTTTCAATTTTGTATTTATTATATTTTTTACATTTACTAAAAAGAAATATACGTTAAGTCTTATATAGGCACAGTGCAATATTTTTTTTTAAAAAAACAGAAGTCCCAAATATTACTTGAGTTCGCAAAAAAAGGTGGGGGTAAATTTGTCAATTCATTATTTTTACAATAAGACAAAATGACGTAAATGGAAGGCATCGCAATTGAGAGATGGAGCAAAACAAGTAAAGACCGACTTCTTTTAAGATCCGTCCATTAAACTCTCGATGGTATGCTTTCGAGCAACCCGATCAATTTTTTCTTCTCTCCCACTTGAGAACGATTTCCTGATGATCTTTTACTATTACCCATCTTCAAGTTTCCTCTAATTCTGTAGCTTACAGGCATCCCTCTTGACGACGATGGAGCGTTGGTGTGGAATTTTGAAGGTTCCATTGCATCCCCAGAGCCACAAGTTTTATCGAGTTGCTGCATCACTCTGTCTTTCCCCGTCTTCCAAAACATTGACTGTAAGTTCCCGATGCTCGAAATGCAATTGTATTCTGGAATTTCCTGCCATGGGGGGTATTTAACTTTTTATAATATCTTCCATGCTAATAGATGCCTCATGCGAATGCCATCCTTTTTAATGGGGATCGGGTCGAAGGGACGGGCAATCCAGTGATTGAGAGATTGTCTGATCTGCAGAACATAGCCGATATTTTAGTTTCGAAATTTGGAGACTCCACTAATGCATGGGTTATTGAGGCTTCTGATTTCAATGGGCCTTTTGCTATATATCATGATTTTATACCTTCTCTCAATCGATGGGGAGAGCCAAAATCATATACTGCAAATGGGTTTCCTGCTTCAGTGTCAACCCTTTCACTTTTGGGAAGTTGCTACAGTGAGGTACGATCCAAATGGGTTTGTTGCTTGTCATTTTATTCCAAATGGGTCAAGTCTTGAATTTCTCACCTCTTGATCAAAACATATGTCTAAATTGGTTAAATCATATCTAGGGAAGATTCAAATCATGACTTCATAGTGGATAGTGTATAACTAAACTTAGCTATGGTCAGAAAAGATTTGGTTCTCTAATATTTTATTTGATGGTGTATGCCCAAACCAAGAGTTGAGTTGAATCTCCAATCTCTTGGCCGCGAGTATTTCTATAAATCAAATGGGTTATGTTTTGGTTGGTTTCTATATGTGATTTTGCTGTGGACTAATTCACTATGTTGTGGATCTGACAGGTAAAGAAGATAATTTCAAGGAGAAACCAAGGATCTCCGGAAGCCACCATATCCACACTAGGATGCAGCACGCCCAAAACAATCATTCTTGGATTTAGCAAGGGTGGTACTGTCGTTAACCAGTTAGTTGCTGAACTTGGCTCGAAGGACTTGATAGCTGCTGACGAGAATCCACCTCATTCTAAGCAAGCACCGGGTGTTGAATGTTCAAAACTCGACGAGGTTCAGTTCATACCCAATACAGAACAAAGCTTTTTGAAAAGCATAACAGAGATTCATTATGTGGATGTTGGGTTGAACTCTCATGGCGCATACTTCACAGACCCTGAGGTAATGAAAAGAATCTCCAATAGCCTTGTCCAGGAGTCGAGAGGAATCCGTTTCGTTCTTCATGGTACTCCTAGACAATGGTGTGACAGCAGAAGAGTTTGGATACGAGATGAGAAGGAAAAAATGTTGAGTCTTCTTGAATCCGAAGCTCGGAGAAGTGGAGGAAGGTTGCAGGTTTGTGAGAGATTTCATTTTGCTGATAGGCCCGCGGACATGCAGATGCATTTTGAAATAATTGAAAAGTTGGATGTTTGCTGATGGCTCTGTTGTCAGGTCGCTGGAAAATCAAGAGTTCTGAACATATCCTATGTAGTTCGTTGTACAAAATGATAATGTTTCTAAGTTGAAGTACTTGTTAACACTTGCTTCATCATTGAGCACTTCAATATAAATATCTTTATTAATGCTAGTAGACCCCATATTACTGTAACAACTAATAAATACCACTGTGGTTAATGCTATCTTTCATATTATATTAACATAATTAATGAATATTTGCAGCATGTACAAATAATCGAGTTGATATGTGCAGATGAGA

mRNA sequence

ATGAGATCAAAGTTTTGCGCATTGTCGCTTCTGAGTCATACATATTTCAGTTGCTCTTCTGTTAAATCCACCCAACATGTTGTGCGCAGAGTTCTTACCAGTGGTTTTAGTTCATGGCCTACTCGCATTCATACCGTCTACCCTACTACTGCATTGAACTCCAATGTTGGGGATCTTTTCTCCTCTGGCTTTTGTTCTCGCTATTATAGCTCTCCGGGTTCGAACTGCGATATTTTGAATATGCCTTCAGAAGAATCTAGTCAACATGCAGCCAATGATGATCATGTTAGTGACGACGATGATGATGATCGAGAAGAGCAGGAAGAGGATAACATGAACATTGAGCCATTGAACATCAATGACAAAGGTGTGATACGAGATGTGGATGCCATTATGGATATATTTCGTGGGTTTTGGAATGAAGATCGAATTCAAGTAAAGAATAAGCTTGAGCATTGCTGTATTAAGGTCTCAGGGGAGTTGGTAGTAGCAGTACTTTCTCGGATCCGTAATGATTGGGAAGCAGCATTCACTTTTTTTGTTTGGGCTGGTAAGCAGCCTGGCTATACCCACTCTATTCGTGAATATCATTCAATGATTTCAATTCTTGGGAAAATGAGGAAGTTTGACACGGCATGGGCCTTGATCGATGAGATGAGAGGAGGGACAACGGGCTCTTCTCTTGTGACACCTCAAACTCTACTAATCATGATTAGGAGATACTGTGCCGTTCATGATGTTGGTAAAGCTATAAATACCTTCCATGCTCATAAAAGATTCGGATTCAAAGTTGGACTAGAGGAATTTCAAAGCCTTCTCTCTGCCCTCTGCCGTTACAAAAATGTGAAGGATGCTGAATATTTACTCTTCTGCAACAAAGATGTGTTCCCGTTGAACACAAAGAGCTTCAATATTGTCCTCAATGGATGGTGCAATATAATTGGCAGTCTTCGCGATGCAGAGAGAATTTGGAGGGAGATGACGCAGAGGGGTATCGGTCATGATGCTGTCTCATATGCAAGTATAATTTCTTGTTACTCAAAACTTCGCAACCTTTATAGGGTGGTCAGGCTTTTTGACAATATGAAGCAAATGAAAATTGACCCTGATAGGAAAGTCTACAATGCAGTCATTCACGCTCTTGCCAAAGGTGGGCTTCTGAAAGAAGCTATCGATCTCATAAAAACAATGGAGGAGAAGGGCATTATTCCAAATGTTGTTACTTATAACTCGGTTATCAAACCTCTATGCAAGGCCCGGAAATTTGATGATGCTAGAGTGGTTTTTGAGGAGCTGTTGGAGCGGGGCCTCTGCCCGACAATTCAGACATATCATGCGTTCTTGAGATTCCTGAGAACGGAGGAAGAAATATTTGAGGTATTGGAGAAGATGAGAAGAATGGGGTGCAATCCAACCACTGAAACCTACATAATGTTGATCAGAAAATTTTGCCGATGGCGGCAGCTTGATATTGTTTCCAGAATATGGCATGAAATGAGTGAAAATGGAATTGGTCCTGATCGCAGCTCTTATATTGTCTTAATACACGGTCTCTTCTTGAATGGGAAACTAGAAGATGCATATAAATACTATTTGGAAATGAAGGAAAAAGAGTTGCTTCCTGAACCAAAGATAGATGAGGTACTAAAAGCTTGGCTTGCTGGTAAGCCAGTGATTCAAGGCTACATGAATGGTTCATCAGAGAATCCATCAGATTCTTCTGGGGAAGGCAAGAACTCGAACTCGAACTCGAACTCGAGCTCGAGCTCGAAATTGTTCCCCAAAAAAATTGATTTTCACAGACAACCTGAGATCAGAAAGGATCGAATGCTTCGAGTGCACGACTTCAACCGTTCATCTGAGTTCACTTCAGTTCAAGTGCGGAAGACCGTTGCGAAGCCTAGTAAACTTTTTTACACATGCCCGGATCCTAAGACGTTAGAGGCATCCCTCTTGACGACGATGGAGCGTTGGTGTGGAATTTTGAAGGTTCCATTGCATCCCCAGAGCCACAAGTTTTATCGAGTTGCTGCATCACTCTGTCTTTCCCCGTCTTCCAAAACATTGACTATGCCTCATGCGAATGCCATCCTTTTTAATGGGGATCGGGTCGAAGGGACGGGCAATCCAGTGATTGAGAGATTGTCTGATCTGCAGAACATAGCCGATATTTTAGTTTCGAAATTTGGAGACTCCACTAATGCATGGGTTATTGAGGCTTCTGATTTCAATGGGCCTTTTGCTATATATCATGATTTTATACCTTCTCTCAATCGATGGGGAGAGCCAAAATCATATACTGCAAATGGGTTTCCTGCTTCAGTGTCAACCCTTTCACTTTTGGGAAGTTGCTACAGTGAGGTAAAGAAGATAATTTCAAGGAGAAACCAAGGATCTCCGGAAGCCACCATATCCACACTAGGATGCAGCACGCCCAAAACAATCATTCTTGGATTTAGCAAGGGTGGTACTGTCGTTAACCAGTTAGTTGCTGAACTTGGCTCGAAGGACTTGATAGCTGCTGACGAGAATCCACCTCATTCTAAGCAAGCACCGGGTGTTGAATGTTCAAAACTCGACGAGGTTCAGTTCATACCCAATACAGAACAAAGCTTTTTGAAAAGCATAACAGAGATTCATTATGTGGATGTTGGGTTGAACTCTCATGGCGCATACTTCACAGACCCTGAGGTAATGAAAAGAATCTCCAATAGCCTTGTCCAGGAGTCGAGAGGAATCCGTTTCGTTCTTCATGGTACTCCTAGACAATGGTGTGACAGCAGAAGAGTTTGGATACGAGATGAGAAGGAAAAAATGTTGAGTCTTCTTGAATCCGAAGCTCGGAGAAGTGGAGGAAGGTTGCAGGTTTGTGAGAGATTTCATTTTGCTGATAGGCCCGCGGACATGCAGATGCATTTTGAAATAATTGAAAAGTTGGATGTTTGCTGATGGCTCTGTTGTCAGGTCGCTGGAAAATCAAGAGTTCTGAACATATCCTATGTAGTTCGTTGTACAAAATGATAATGTTTCTAAGTTGAAGTACTTGTTAACACTTGCTTCATCATTGAGCACTTCAATATAAATATCTTTATTAATGCTAGTAGACCCCATATTACTGTAACAACTAATAAATACCACTGTGGTTAATGCTATCTTTCATATTATATTAACATAATTAATGAATATTTGCAGCATGTACAAATAATCGAGTTGATATGTGCAGATGAGA

Coding sequence (CDS)

ATGAGATCAAAGTTTTGCGCATTGTCGCTTCTGAGTCATACATATTTCAGTTGCTCTTCTGTTAAATCCACCCAACATGTTGTGCGCAGAGTTCTTACCAGTGGTTTTAGTTCATGGCCTACTCGCATTCATACCGTCTACCCTACTACTGCATTGAACTCCAATGTTGGGGATCTTTTCTCCTCTGGCTTTTGTTCTCGCTATTATAGCTCTCCGGGTTCGAACTGCGATATTTTGAATATGCCTTCAGAAGAATCTAGTCAACATGCAGCCAATGATGATCATGTTAGTGACGACGATGATGATGATCGAGAAGAGCAGGAAGAGGATAACATGAACATTGAGCCATTGAACATCAATGACAAAGGTGTGATACGAGATGTGGATGCCATTATGGATATATTTCGTGGGTTTTGGAATGAAGATCGAATTCAAGTAAAGAATAAGCTTGAGCATTGCTGTATTAAGGTCTCAGGGGAGTTGGTAGTAGCAGTACTTTCTCGGATCCGTAATGATTGGGAAGCAGCATTCACTTTTTTTGTTTGGGCTGGTAAGCAGCCTGGCTATACCCACTCTATTCGTGAATATCATTCAATGATTTCAATTCTTGGGAAAATGAGGAAGTTTGACACGGCATGGGCCTTGATCGATGAGATGAGAGGAGGGACAACGGGCTCTTCTCTTGTGACACCTCAAACTCTACTAATCATGATTAGGAGATACTGTGCCGTTCATGATGTTGGTAAAGCTATAAATACCTTCCATGCTCATAAAAGATTCGGATTCAAAGTTGGACTAGAGGAATTTCAAAGCCTTCTCTCTGCCCTCTGCCGTTACAAAAATGTGAAGGATGCTGAATATTTACTCTTCTGCAACAAAGATGTGTTCCCGTTGAACACAAAGAGCTTCAATATTGTCCTCAATGGATGGTGCAATATAATTGGCAGTCTTCGCGATGCAGAGAGAATTTGGAGGGAGATGACGCAGAGGGGTATCGGTCATGATGCTGTCTCATATGCAAGTATAATTTCTTGTTACTCAAAACTTCGCAACCTTTATAGGGTGGTCAGGCTTTTTGACAATATGAAGCAAATGAAAATTGACCCTGATAGGAAAGTCTACAATGCAGTCATTCACGCTCTTGCCAAAGGTGGGCTTCTGAAAGAAGCTATCGATCTCATAAAAACAATGGAGGAGAAGGGCATTATTCCAAATGTTGTTACTTATAACTCGGTTATCAAACCTCTATGCAAGGCCCGGAAATTTGATGATGCTAGAGTGGTTTTTGAGGAGCTGTTGGAGCGGGGCCTCTGCCCGACAATTCAGACATATCATGCGTTCTTGAGATTCCTGAGAACGGAGGAAGAAATATTTGAGGTATTGGAGAAGATGAGAAGAATGGGGTGCAATCCAACCACTGAAACCTACATAATGTTGATCAGAAAATTTTGCCGATGGCGGCAGCTTGATATTGTTTCCAGAATATGGCATGAAATGAGTGAAAATGGAATTGGTCCTGATCGCAGCTCTTATATTGTCTTAATACACGGTCTCTTCTTGAATGGGAAACTAGAAGATGCATATAAATACTATTTGGAAATGAAGGAAAAAGAGTTGCTTCCTGAACCAAAGATAGATGAGGTACTAAAAGCTTGGCTTGCTGGTAAGCCAGTGATTCAAGGCTACATGAATGGTTCATCAGAGAATCCATCAGATTCTTCTGGGGAAGGCAAGAACTCGAACTCGAACTCGAACTCGAGCTCGAGCTCGAAATTGTTCCCCAAAAAAATTGATTTTCACAGACAACCTGAGATCAGAAAGGATCGAATGCTTCGAGTGCACGACTTCAACCGTTCATCTGAGTTCACTTCAGTTCAAGTGCGGAAGACCGTTGCGAAGCCTAGTAAACTTTTTTACACATGCCCGGATCCTAAGACGTTAGAGGCATCCCTCTTGACGACGATGGAGCGTTGGTGTGGAATTTTGAAGGTTCCATTGCATCCCCAGAGCCACAAGTTTTATCGAGTTGCTGCATCACTCTGTCTTTCCCCGTCTTCCAAAACATTGACTATGCCTCATGCGAATGCCATCCTTTTTAATGGGGATCGGGTCGAAGGGACGGGCAATCCAGTGATTGAGAGATTGTCTGATCTGCAGAACATAGCCGATATTTTAGTTTCGAAATTTGGAGACTCCACTAATGCATGGGTTATTGAGGCTTCTGATTTCAATGGGCCTTTTGCTATATATCATGATTTTATACCTTCTCTCAATCGATGGGGAGAGCCAAAATCATATACTGCAAATGGGTTTCCTGCTTCAGTGTCAACCCTTTCACTTTTGGGAAGTTGCTACAGTGAGGTAAAGAAGATAATTTCAAGGAGAAACCAAGGATCTCCGGAAGCCACCATATCCACACTAGGATGCAGCACGCCCAAAACAATCATTCTTGGATTTAGCAAGGGTGGTACTGTCGTTAACCAGTTAGTTGCTGAACTTGGCTCGAAGGACTTGATAGCTGCTGACGAGAATCCACCTCATTCTAAGCAAGCACCGGGTGTTGAATGTTCAAAACTCGACGAGGTTCAGTTCATACCCAATACAGAACAAAGCTTTTTGAAAAGCATAACAGAGATTCATTATGTGGATGTTGGGTTGAACTCTCATGGCGCATACTTCACAGACCCTGAGGTAATGAAAAGAATCTCCAATAGCCTTGTCCAGGAGTCGAGAGGAATCCGTTTCGTTCTTCATGGTACTCCTAGACAATGGTGTGACAGCAGAAGAGTTTGGATACGAGATGAGAAGGAAAAAATGTTGAGTCTTCTTGAATCCGAAGCTCGGAGAAGTGGAGGAAGGTTGCAGGTTTGTGAGAGATTTCATTTTGCTGATAGGCCCGCGGACATGCAGATGCATTTTGAAATAATTGAAAAGTTGGATGTTTGCTGA

Protein sequence

MRSKFCALSLLSHTYFSCSSVKSTQHVVRRVLTSGFSSWPTRIHTVYPTTALNSNVGDLFSSGFCSRYYSSPGSNCDILNMPSEESSQHAANDDHVSDDDDDDREEQEEDNMNIEPLNINDKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRVVRLFDNMKQMKIDPDRKVYNAVIHALAKGGLLKEAIDLIKTMEEKGIIPNVVTYNSVIKPLCKARKFDDARVVFEELLERGLCPTIQTYHAFLRFLRTEEEIFEVLEKMRRMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENGIGPDRSSYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKAWLAGKPVIQGYMNGSSENPSDSSGEGKNSNSNSNSSSSSKLFPKKIDFHRQPEIRKDRMLRVHDFNRSSEFTSVQVRKTVAKPSKLFYTCPDPKTLEASLLTTMERWCGILKVPLHPQSHKFYRVAASLCLSPSSKTLTMPHANAILFNGDRVEGTGNPVIERLSDLQNIADILVSKFGDSTNAWVIEASDFNGPFAIYHDFIPSLNRWGEPKSYTANGFPASVSTLSLLGSCYSEVKKIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVVNQLVAELGSKDLIAADENPPHSKQAPGVECSKLDEVQFIPNTEQSFLKSITEIHYVDVGLNSHGAYFTDPEVMKRISNSLVQESRGIRFVLHGTPRQWCDSRRVWIRDEKEKMLSLLESEARRSGGRLQVCERFHFADRPADMQMHFEIIEKLDVC

Homology

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BLAST of Carg17662 vs. NCBI nr
Match: XP_022924384.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial [Cucurbita moschata])

HSP 1 Score: 793.1 bits (2047), Expect = 1.1e-225
Identity = 549/578 (94.98%), Postives = 549/578 (94.98%), Query Frame = 0


Query: 30  RVLTSGFSSWPTRIHTVYPTTALNSNVGDLFSSGFCSRYYSSPGSNCDILNMPSEXXXXX 89
           R LTSGFSSWPTRIHTVYPTTALNSNVGDLFSSGFCSRYYSSPGSNCDILNMPSEXXXXX
Sbjct: 3   RALTSGFSSWPTRIHTVYPTTALNSNVGDLFSSGFCSRYYSSPGSNCDILNMPSEXXXXX 62

Query: 90  XXXXXXXXXXXXXXXXXXXXXXMNIEPLNINDKGVIRDVDAIMDIFRGFWNEDRIQVKNK 149
           XXXXXXXXXXXXXXXXXXXXXXMNIE LNINDKGVIRDVDAIMDIF GF NEDRIQVKNK
Sbjct: 63  XXXXXXXXXXXXXXXXXXXXXXMNIEKLNINDKGVIRDVDAIMDIFCGFRNEDRIQVKNK 122

Query: 150 LEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKF 209
           LEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKF
Sbjct: 123 LEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKF 182

Query: 210 DTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEF 269
           DTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEF
Sbjct: 183 DTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEF 242

Query: 270 QSLLSALCRYKNVKDAEYLLFCNKDVFPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQ 329
           QSLLSALCRYKNVKDAEYLLFCNKDVFPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQ
Sbjct: 243 QSLLSALCRYKNVKDAEYLLFCNKDVFPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQ 302

Query: 330 RGIGHDAVSYASIISCYSKLRNLYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 389
           RGIGHDAVSYASIISCYSKLRNLYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 303 RGIGHDAVSYASIISCYSKLRNLYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 362

Query: 390 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 449
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 363 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 422

Query: 450 XLRTEEEIFEVLEKMRRMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENXXXXXXX 509
           X RTEEEIFEVLEKMRRMGCNP TETYIMLIRKFCRWRQLDIVSRIWHEMSEN       
Sbjct: 423 XXRTEEEIFEVLEKMRRMGCNPITETYIMLIRKFCRWRQLDIVSRIWHEMSENGIGPDRS 482

Query: 510 XXXXXXHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKAWLAGKPVIQGYMNGSSEN 569
                 HGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKAWLAGKPVIQGYMNGSSEN
Sbjct: 483 SYIVLIHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKAWLAGKPVIQGYMNGSSEN 542

Query: 570 XXXXXXXXXXXXXXXXXXXXXXLFPKKIDFHRQPEIRK 608
                    XXXXXXXXXXXX LFPKKIDFHRQPEIRK
Sbjct: 543 ------PSDXXXXXXXXXXXXKLFPKKIDFHRQPEIRK 574

[Close]

BLAST of Carg17662 vs. NCBI nr
Match: XP_023527396.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527397.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527398.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 774.6 bits (1999), Expect = 3.9e-220
Identity = 547/607 (90.12%), Postives = 549/607 (90.44%), Query Frame = 0


Query: 1   MRSKFCALSLLSHTYFSCSSVKSTQHVVRRVLTSGFSSWPTRIHTVYPTTALNSNVGDLF 60
           MRSKFCALSLLSHTYFSCSSVKSTQHVVRR LTSGFSSWPTR+HTVYPTTALNSNVGDLF
Sbjct: 6   MRSKFCALSLLSHTYFSCSSVKSTQHVVRRALTSGFSSWPTRMHTVYPTTALNSNVGDLF 65

Query: 61  SSGFCSRYYSSPGSNCDILNMPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXMNIEPLNIN 120
           SSGFCSRYYSSPGSNCDILNMPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXMNIE LNIN
Sbjct: 66  SSGFCSRYYSSPGSNCDILNMPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXMNIEQLNIN 125

Query: 121 DKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFF 180
           DKGVIRDVDAIMDIFRGF N DRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFF
Sbjct: 126 DKGVIRDVDAIMDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFF 185

Query: 181 VWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRR 240
           VWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRR
Sbjct: 186 VWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRR 245

Query: 241 YCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPLNT 300
           YCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFP NT
Sbjct: 246 YCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNT 305

Query: 301 KSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRXXXXXX 360
           KSFNIVLNGWCN IGSLRDAERIWREM QRGIGHDAVSYASIISCYSK+RNLY XXXXXX
Sbjct: 306 KSFNIVLNGWCNTIGSLRDAERIWREMAQRGIGHDAVSYASIISCYSKVRNLYXXXXXXX 365

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 366 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 425

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLEKMRRMGCNPTTETYIMLI 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLE MR MGCNPTTETYIMLI
Sbjct: 426 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLENMRTMGCNPTTETYIMLI 485

Query: 481 RKFCRWRQLDIVSRIWHEMSENXXXXXXXXXXXXXHGLFLNGKLEDAYKYYLEMKEKELL 540
           RKFCRWRQLDIVSRIWHEMS  XXXXXXXXXXXXX                      ELL
Sbjct: 486 RKFCRWRQLDIVSRIWHEMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELL 545

Query: 541 PEPKIDEVLKAWLAGKPVIQGYMNGSSENXXXXXXXXXXXXXXXXXXXXXXLFPKKIDFH 600
           PEPKIDEVLKAWLAG P IQGYMNGSSEN                      LFPKKIDFH
Sbjct: 546 PEPKIDEVLKAWLAGNPGIQGYMNGSSEN------PSDSSGEGKNWNPNSKLFPKKIDFH 605

Query: 601 RQPEIRK 608
           RQPEIRK
Sbjct: 606 RQPEIRK 606

[Close]

BLAST of Carg17662 vs. NCBI nr
Match: XP_022979235.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979236.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979237.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima] >XP_022979238.1 pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 768.5 bits (1983), Expect = 2.8e-218
Identity = 544/612 (88.89%), Postives = 547/612 (89.38%), Query Frame = 0


Query: 1   MRSKFCALSLLSHTYFSCSSVKSTQHVVRRVLT-----SGFSSWPTRIHTVYPTTALNSN 60
           MRSKFCALSLLS+T+FSCSSVKSTQHVVRR LT     SGFSSWPTRIHTVYPTTALNSN
Sbjct: 6   MRSKFCALSLLSNTHFSCSSVKSTQHVVRRALTSATVASGFSSWPTRIHTVYPTTALNSN 65

Query: 61  VGDLFSSGFCSRYYSSPGSNCDILNMPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXMNIE 120
           VGDLFSSGFCSRYYSSPGSNCDILNMPSE  XXXXXXXXXXXXXXXXXXXXXXXXXMNIE
Sbjct: 66  VGDLFSSGFCSRYYSSPGSNCDILNMPSEEAXXXXXXXXXXXXXXXXXXXXXXXXXMNIE 125

Query: 121 PLNINDKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEA 180
            LNINDKGVIRDVDAIMDIFRGF N DRIQVKNKLEHCCIKVSGELVV VLSRIRNDWEA
Sbjct: 126 QLNINDKGVIRDVDAIMDIFRGFRNVDRIQVKNKLEHCCIKVSGELVVTVLSRIRNDWEA 185

Query: 181 AFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLL 240
           AFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTL+
Sbjct: 186 AFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLI 245

Query: 241 IMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDV 300
           IMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKD 
Sbjct: 246 IMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDA 305

Query: 301 FPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRX 360
           FP NTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYR 
Sbjct: 306 FPFNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRV 365

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 366 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 425

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLEKMRRMGCNPTTET 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLEKMR MGCNPTTET
Sbjct: 426 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLEKMRTMGCNPTTET 485

Query: 481 YIMLIRKFCRWRQLDIVSRIWHEMSENXXXXXXXXXXXXXHGLFLNGKLEDAYKYYLEMK 540
           YIMLIRKFCRWRQLDIVSRIWHE    XXXXXXXXXXXXX                    
Sbjct: 486 YIMLIRKFCRWRQLDIVSRIWHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 545

Query: 541 EKELLPEPKIDEVLKAWLAGKPVIQGYMNGSSENXXXXXXXXXXXXXXXXXXXXXXLFPK 600
              LLPEPKIDEVLKAWLAGKPVIQGYMNGSSEN                      LFPK
Sbjct: 546 XXXLLPEPKIDEVLKAWLAGKPVIQGYMNGSSEN--------TSDSSGEGKNSNSKLFPK 605

Query: 601 KIDFHRQPEIRK 608
           KIDFHRQPEIRK
Sbjct: 606 KIDFHRQPEIRK 609

[Close]

BLAST of Carg17662 vs. NCBI nr
Match: XP_023527404.1 (uncharacterized protein LOC111790644 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 750.0 bits (1935), Expect = 1.0e-212
Identity = 366/373 (98.12%), Postives = 369/373 (98.93%), Query Frame = 0


Query: 610 MLRVHDFNRSSEFTSVQVRKTVAKPSKLFYTCPDPKTLEASLLTTMERWCGILKVPLHPQ 669
           MLRVHDFNRSSEFTSVQVRKTVAKPSKLFYTCPDPKTLEASLLTTMERWCGILKVPLHPQ
Sbjct: 1   MLRVHDFNRSSEFTSVQVRKTVAKPSKLFYTCPDPKTLEASLLTTMERWCGILKVPLHPQ 60

Query: 670 SHKFYRVAASLCLSPSSKTLTMPHANAILFNGDRVEGTGNPVIERLSDLQNIADILVSKF 729
           SHKFYRVAASLCLSP+SKTLT PHANAILFNGDRVEGTGNPVIERLSD QNIADILVSKF
Sbjct: 61  SHKFYRVAASLCLSPTSKTLTTPHANAILFNGDRVEGTGNPVIERLSDPQNIADILVSKF 120

Query: 730 GDSTNAWVIEASDFNGPFAIYHDFIPSLNRWGEPKSYTANGFPASVSTLSLLGSCYSEVK 789
           GDSTNAWVIEASDFNGPFAIYHDFIPSLNRWGEPKSYTANGFPASVSTLSLLGSCYSEVK
Sbjct: 121 GDSTNAWVIEASDFNGPFAIYHDFIPSLNRWGEPKSYTANGFPASVSTLSLLGSCYSEVK 180

Query: 790 KIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVVNQLVAELGSKDLIAADENPPHSK 849
           KIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVVNQLVAELGSKDLIAADENPPHSK
Sbjct: 181 KIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVVNQLVAELGSKDLIAADENPPHSK 240

Query: 850 QAPGVECSKLDEVQFIPNTEQSFLKSITEIHYVDVGLNSHGAYFTDPEVMKRISNSLVQE 909
           QAPGVECSKLDEVQFIPNTEQSFLKSITEIHYVDVGLNS GAYFTDPEV+KRISNSLVQE
Sbjct: 241 QAPGVECSKLDEVQFIPNTEQSFLKSITEIHYVDVGLNSQGAYFTDPEVIKRISNSLVQE 300

Query: 910 SRGIRFVLHGTPRQWCDSRRVWIRDEKEKMLSLLESEARRSGGRLQVCERFHFADRPADM 969
           SRGIRFVLHGTPRQWCDSRRVWIRDEK+KMLS LESEARRSGGRLQVCERFHFADRPADM
Sbjct: 301 SRGIRFVLHGTPRQWCDSRRVWIRDEKDKMLSFLESEARRSGGRLQVCERFHFADRPADM 360

Query: 970 QMHFEIIEKLDVC 983
           QMHFEIIEKLDVC
Sbjct: 361 QMHFEIIEKLDVC 373

[Close]

BLAST of Carg17662 vs. NCBI nr
Match: XP_023527399.1 (pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 719.5 bits (1856), Expect = 1.5e-203
Identity = 518/578 (89.62%), Postives = 520/578 (89.97%), Query Frame = 0


Query: 30  RVLTSGFSSWPTRIHTVYPTTALNSNVGDLFSSGFCSRYYSSPGSNCDILNMPSEXXXXX 89
           R LTSGFSSWPTR+HTVYPTTALNSNVGDLFSSGFCSRYYSSPGSNCDILNMPSEXXXXX
Sbjct: 3   RALTSGFSSWPTRMHTVYPTTALNSNVGDLFSSGFCSRYYSSPGSNCDILNMPSEXXXXX 62

Query: 90  XXXXXXXXXXXXXXXXXXXXXXMNIEPLNINDKGVIRDVDAIMDIFRGFWNEDRIQVKNK 149
           XXXXXXXXXXXXXXXXXXXXXXMNIE LNINDKGVIRDVDAIMDIFRGF N DRIQVKNK
Sbjct: 63  XXXXXXXXXXXXXXXXXXXXXXMNIEQLNINDKGVIRDVDAIMDIFRGFRNVDRIQVKNK 122

Query: 150 LEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKF 209
           LEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKF
Sbjct: 123 LEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKF 182

Query: 210 DTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEF 269
           DTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEF
Sbjct: 183 DTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEF 242

Query: 270 QSLLSALCRYKNVKDAEYLLFCNKDVFPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQ 329
           QSLLSALCRYKNVKDAEYLLFCNKDVFP NTKSFNIVLNGWCN IGSLRDAERIWREM Q
Sbjct: 243 QSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIVLNGWCNTIGSLRDAERIWREMAQ 302

Query: 330 RGIGHDAVSYASIISCYSKLRNLYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 389
           RGIGHDAVSYASIISCYSK+RNLY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 303 RGIGHDAVSYASIISCYSKVRNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 362

Query: 390 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 449
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 363 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 422

Query: 450 XLRTEEEIFEVLEKMRRMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSENXXXXXXX 509
           XLRTEEEIFEVLE MR MGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMS  XXXXXXX
Sbjct: 423 XLRTEEEIFEVLENMRTMGCNPTTETYIMLIRKFCRWRQLDIVSRIWHEMSXXXXXXXXX 482

Query: 510 XXXXXXHGLFLNGKLEDAYKYYLEMKEKELLPEPKIDEVLKAWLAGKPVIQGYMNGSSEN 569
           XXXXXX                      ELLPEPKIDEVLKAWLAG P IQGYMNGSSEN
Sbjct: 483 XXXXXXXXXXXXXXXXXXXXXXXXXXXXELLPEPKIDEVLKAWLAGNPGIQGYMNGSSEN 542

Query: 570 XXXXXXXXXXXXXXXXXXXXXXLFPKKIDFHRQPEIRK 608
                                 LFPKKIDFHRQPEIRK
Sbjct: 543 ------PSDSSGEGKNWNPNSKLFPKKIDFHRQPEIRK 574

[Close]

BLAST of Carg17662 vs. TAIR10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 361.3 bits (926), Expect = 1.9e-99
Identity = 231/440 (52.50%), Postives = 275/440 (62.50%), Query Frame = 0


Query: 118 NINDKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAF 177
           +I+D+ V  DV  I  + +     DR +++NKLE C +K S ELVV +LSR+RNDWE AF
Sbjct: 87  SISDELVSEDVGKISKLVKD-CGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAF 146

Query: 178 TFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIM 237
           TFFVWAGKQ GY  S+REYHSMISILGKMRKFDTAW LIDEMR      SLV  QTLLIM
Sbjct: 147 TFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIM 206

Query: 238 IRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFP 297
           IR+YCAVHDVGKAINTFHA+KRF  ++G+++FQSLLSALCRYKNV DA +L+FCNKD +P
Sbjct: 207 IRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYP 266

Query: 298 LNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYR-XX 357
            + KSFNIVLNGWCN+IGS R+AER+W EM   G+ HD VSY+S+ISCYSK  +L +   
Sbjct: 267 FDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 326

Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 417
                                                      XXXXXXXXXXXXXXXXX
Sbjct: 327 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEXXXXXXXXXXXXXXXXX 386

Query: 418 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLEKMRRMGCNPTTETY 477
           XXXXXXXXXXXXXXXXXX                LRT E                     
Sbjct: 387 XXXXXXXXXXXXXXXXXXKGLFPTIRTYHAFMRILRTGEXXXXXXXXXXXXXXXXXXXXX 446

Query: 478 IMLIRKFCRWRQLDIVSRIWHEMSENXXXXXXXXXXXXXHGLFLNGKLEDAYKYYLEMKE 537
             LIRK CRWR  D V  +W EM E              HGLFLNGK+E+AY YY EMK+
Sbjct: 447 XXLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKD 506

Query: 538 KELLPEPKIDEVLKAWLAGK 557
           K + P   +++++++W +GK
Sbjct: 507 KGMRPNENVEDMIQSWFSGK 523

[Close]

BLAST of Carg17662 vs. TAIR10
Match: AT2G44850.1 (unknown protein)

HSP 1 Score: 323.9 bits (829), Expect = 3.3e-88
Identity = 160/293 (54.61%), Postives = 213/293 (72.70%), Query Frame = 0


Query: 691 MPHANAILFNGDRVEGTGNPVIERLSDLQNIADILVSKFGDSTNAWVIEASDFNGPFAIY 750
           +P ANAI F+GD+V+ TGN VIERL DLQ +A+I+VSKFG+S NAWV+EAS FNGPFAIY
Sbjct: 117 VPSANAIFFHGDKVQDTGNHVIERLYDLQKVAEIIVSKFGNSVNAWVVEASVFNGPFAIY 176

Query: 751 HDFIPSLNRWGEPKSYTANGFPASVSTLSLLGSCYSEVKKIISRRNQGSPEATISTLGC- 810
            DF+PS+N  G PKSY+  GFPAS S +SLL SC  EV K      +G+    I  +   
Sbjct: 177 KDFVPSVNHMGAPKSYSPVGFPASSSIVSLLSSCLHEVLK------EGTDVCLIDQIASV 236

Query: 811 -STPKTIILGFSKGGTVVNQLVAELGSKDLIAADENPPHSKQAPGVECSKLDEVQFIPNT 870
              PKTI+LGFSKGG V+NQL++E+ S D   A  +    +++     S+ +++Q IP +
Sbjct: 237 HHCPKTIVLGFSKGGVVMNQLMSEISSLDTNFAKTSSAMVEES----TSQHEKIQIIPAS 296

Query: 871 EQSFLKSITEIHYVDVGLNSHGAYFTDPEVMKRISNSLVQESRGIRFVLHGTPRQWCDSR 930
           ++SFL SI+E+HY+DVGLNS GAY TD  V++RIS  L + +  +R V+HGTPRQWCD  
Sbjct: 297 KESFLNSISEVHYIDVGLNSSGAYITDHNVVQRISQRLARGADSLRIVIHGTPRQWCDEL 356

Query: 931 RVWIRDEKEKMLSLLESEARRSGGRLQVCERFHFADRPADMQMHFEIIEKLDV 982
           R WIR EK++++ LL++E   SGG+LQVCERF+F+DR AD+QMHFEII+ +DV
Sbjct: 357 RGWIRKEKDELVRLLKAETENSGGKLQVCERFYFSDRLADLQMHFEIIDAMDV 399

[Close]

BLAST of Carg17662 vs. TAIR10
Match: AT1G80880.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 141.4 bits (355), Expect = 3.1e-33
Identity = 78/242 (32.23%), Postives = 129/242 (53.31%), Query Frame = 0


Query: 112 MNIEPLNINDKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRN 171
           +N+  L   +KG+I  +  + ++      E        LE     ++ +   +++  +R+
Sbjct: 82  INLTALAPLEKGLIDLIRQVSEL------ESEADAMASLEDSSFDLNHDSFYSLIWELRD 141

Query: 172 DWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTP 231
           +W  AF  F W  K+       +    MI +LG  +KF+ AW LI +M       S  T 
Sbjct: 142 EWRLAFLAFKWGEKRG--CDDQKSCDLMIWVLGNHQKFNIAWCLIRDM----FNVSKDTR 201

Query: 232 QTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFC 291
           + + +M+ RY A +D  +AI TF    +F      E FQ LL ALCR+ +++ AE  +  
Sbjct: 202 KAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLA 261

Query: 292 NKDVFPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRN 351
           +K +FP++ + FN++LNGWCNI   + +A+RIWREM    I  +  SY+ +ISC+SK+ N
Sbjct: 262 SKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGN 311

Query: 352 LY 354
           L+
Sbjct: 322 LF 311

[Close]

BLAST of Carg17662 vs. TAIR10
Match: AT3G15200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 138.7 bits (348), Expect = 2.0e-32
Identity = 183/431 (42.46%), Postives = 250/431 (58.00%), Query Frame = 0


Query: 121 DKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFF 180
           DK    DV  I+   RG   E   ++K  L+ C I ++ ELV+ V++R R+DW+ A+   
Sbjct: 74  DKQSALDVHNIIKHHRGSSPE---KIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILS 133

Query: 181 VWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRR 240
               KQ  +  S   Y+ ++ +LGKMR+F+    + DEM   +     V  +T  +++ R
Sbjct: 134 QLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEM---SKRDGFVNEKTYEVLLNR 193

Query: 241 YCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPLNT 300
           Y A H V +A+  F   K FG    L  F  LL  LCRYK+V+ AE L    +  F  + 
Sbjct: 194 YAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDI 253

Query: 301 KSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRXXXXXX 360
           K+ N++LNGWC ++G++ +A+R W+++       D V                 XXXXXX
Sbjct: 254 KAMNMILNGWC-VLGNVHEAKRFWKDIIASKCRPDVVXXXXXXXXXXXXXXXXXXXXXXX 313

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 373

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTE--EEIFEVLEKMRRMGCNPTTETYIM 480
           XXXXXXXXXXXXXXXX                ++  +++  VLE+M +  C  T++ Y +
Sbjct: 374 XXXXXXXXXXXXXXXXGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNL 433

Query: 481 LIRKFCRWRQLDIVSRIWHEMSENXXXXXXXXXXXXXHGLFLNGKLEDAYKYYLEMKEKE 540
           + R + +W + + V  IW EM  +             HGL   GK+ +A  Y+ EM  K 
Sbjct: 434 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 493

Query: 541 LLPEPKIDEVL 550
           ++PEP+ + +L
Sbjct: 494 MVPEPRTEMLL 497

[Close]

BLAST of Carg17662 vs. TAIR10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 4.6e-29
Identity = 71/206 (34.47%), Postives = 111/206 (53.88%), Query Frame = 0


Query: 127 DVDAIMDIFRGFWNEDRI-QVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGK 186
           DV+    I R F    R+ +++  L    +++   L+  VL+R  +     + FFVWA K
Sbjct: 82  DVEKSYRILRKF--HSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAK 141

Query: 187 QPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVH 246
           QP Y HSI  Y SM+ IL KMR+F   W LI+EMR       L+ P+  +++++R+ +  
Sbjct: 142 QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR--KENPQLIEPELFVVLVQRFASAD 201

Query: 247 DVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPLNTKSFNI 306
            V KAI       +FGF+     F  LL ALC++ +VKDA  L    +  FP+N + F  
Sbjct: 202 MVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTS 261

Query: 307 VLNGWCNIIGSLRDAERIWREMTQRG 332
           +L GWC  +G + +A+ +  +M + G
Sbjct: 262 LLYGWCR-VGKMMEAKYVLVQMNEAG 282

[Close]

BLAST of Carg17662 vs. Swiss-Prot
Match: sp|Q9LFQ4|PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 361.3 bits (926), Expect = 3.4e-98
Identity = 231/440 (52.50%), Postives = 275/440 (62.50%), Query Frame = 0


Query: 118 NINDKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAF 177
           +I+D+ V  DV  I  + +     DR +++NKLE C +K S ELVV +LSR+RNDWE AF
Sbjct: 87  SISDELVSEDVGKISKLVKD-CGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAF 146

Query: 178 TFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIM 237
           TFFVWAGKQ GY  S+REYHSMISILGKMRKFDTAW LIDEMR      SLV  QTLLIM
Sbjct: 147 TFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIM 206

Query: 238 IRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFP 297
           IR+YCAVHDVGKAINTFHA+KRF  ++G+++FQSLLSALCRYKNV DA +L+FCNKD +P
Sbjct: 207 IRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYP 266

Query: 298 LNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYR-XX 357
            + KSFNIVLNGWCN+IGS R+AER+W EM   G+ HD VSY+S+ISCYSK  +L +   
Sbjct: 267 FDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 326

Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 417
                                                      XXXXXXXXXXXXXXXXX
Sbjct: 327 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEXXXXXXXXXXXXXXXXX 386

Query: 418 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLEKMRRMGCNPTTETY 477
           XXXXXXXXXXXXXXXXXX                LRT E                     
Sbjct: 387 XXXXXXXXXXXXXXXXXXKGLFPTIRTYHAFMRILRTGEXXXXXXXXXXXXXXXXXXXXX 446

Query: 478 IMLIRKFCRWRQLDIVSRIWHEMSENXXXXXXXXXXXXXHGLFLNGKLEDAYKYYLEMKE 537
             LIRK CRWR  D V  +W EM E              HGLFLNGK+E+AY YY EMK+
Sbjct: 447 XXLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKD 506

Query: 538 KELLPEPKIDEVLKAWLAGK 557
           K + P   +++++++W +GK
Sbjct: 507 KGMRPNENVEDMIQSWFSGK 523

[Close]

BLAST of Carg17662 vs. Swiss-Prot
Match: sp|Q9SAH2|PP137_ARATH (Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80880 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.5e-32
Identity = 78/242 (32.23%), Postives = 129/242 (53.31%), Query Frame = 0


Query: 112 MNIEPLNINDKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRN 171
           +N+  L   +KG+I  +  + ++      E        LE     ++ +   +++  +R+
Sbjct: 82  INLTALAPLEKGLIDLIRQVSEL------ESEADAMASLEDSSFDLNHDSFYSLIWELRD 141

Query: 172 DWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTP 231
           +W  AF  F W  K+       +    MI +LG  +KF+ AW LI +M       S  T 
Sbjct: 142 EWRLAFLAFKWGEKRG--CDDQKSCDLMIWVLGNHQKFNIAWCLIRDM----FNVSKDTR 201

Query: 232 QTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFC 291
           + + +M+ RY A +D  +AI TF    +F      E FQ LL ALCR+ +++ AE  +  
Sbjct: 202 KAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLA 261

Query: 292 NKDVFPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRN 351
           +K +FP++ + FN++LNGWCNI   + +A+RIWREM    I  +  SY+ +ISC+SK+ N
Sbjct: 262 SKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGN 311

Query: 352 LY 354
           L+
Sbjct: 322 LF 311

[Close]

BLAST of Carg17662 vs. Swiss-Prot
Match: sp|Q9LIL5|PP233_ARATH (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana OX=3702 GN=At3g15200 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.6e-31
Identity = 183/431 (42.46%), Postives = 250/431 (58.00%), Query Frame = 0


Query: 121 DKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFF 180
           DK    DV  I+   RG   E   ++K  L+ C I ++ ELV+ V++R R+DW+ A+   
Sbjct: 74  DKQSALDVHNIIKHHRGSSPE---KIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILS 133

Query: 181 VWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRR 240
               KQ  +  S   Y+ ++ +LGKMR+F+    + DEM   +     V  +T  +++ R
Sbjct: 134 QLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEM---SKRDGFVNEKTYEVLLNR 193

Query: 241 YCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPLNT 300
           Y A H V +A+  F   K FG    L  F  LL  LCRYK+V+ AE L    +  F  + 
Sbjct: 194 YAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDI 253

Query: 301 KSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRXXXXXX 360
           K+ N++LNGWC ++G++ +A+R W+++       D V                 XXXXXX
Sbjct: 254 KAMNMILNGWC-VLGNVHEAKRFWKDIIASKCRPDVVXXXXXXXXXXXXXXXXXXXXXXX 313

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 373

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTE--EEIFEVLEKMRRMGCNPTTETYIM 480
           XXXXXXXXXXXXXXXX                ++  +++  VLE+M +  C  T++ Y +
Sbjct: 374 XXXXXXXXXXXXXXXXGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNL 433

Query: 481 LIRKFCRWRQLDIVSRIWHEMSENXXXXXXXXXXXXXHGLFLNGKLEDAYKYYLEMKEKE 540
           + R + +W + + V  IW EM  +             HGL   GK+ +A  Y+ EM  K 
Sbjct: 434 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 493

Query: 541 LLPEPKIDEVL 550
           ++PEP+ + +L
Sbjct: 494 MVPEPRTEMLL 497

[Close]

BLAST of Carg17662 vs. Swiss-Prot
Match: sp|Q9FH87|PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 8.2e-28
Identity = 71/206 (34.47%), Postives = 111/206 (53.88%), Query Frame = 0


Query: 127 DVDAIMDIFRGFWNEDRI-QVKNKLEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGK 186
           DV+    I R F    R+ +++  L    +++   L+  VL+R  +     + FFVWA K
Sbjct: 82  DVEKSYRILRKF--HSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAK 141

Query: 187 QPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVH 246
           QP Y HSI  Y SM+ IL KMR+F   W LI+EMR       L+ P+  +++++R+ +  
Sbjct: 142 QPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR--KENPQLIEPELFVVLVQRFASAD 201

Query: 247 DVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPLNTKSFNI 306
            V KAI       +FGF+     F  LL ALC++ +VKDA  L    +  FP+N + F  
Sbjct: 202 MVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTS 261

Query: 307 VLNGWCNIIGSLRDAERIWREMTQRG 332
           +L GWC  +G + +A+ +  +M + G
Sbjct: 262 LLYGWCR-VGKMMEAKYVLVQMNEAG 282

[Close]

BLAST of Carg17662 vs. Swiss-Prot
Match: sp|Q3EAF8|PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.2e-25
Identity = 61/164 (37.20%), Postives = 100/164 (60.98%), Query Frame = 0


Query: 150 LEHCCIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKF 209
           L+   + +S +L+V VL R R+  + AF FF WA ++ G+ H+ R Y+SM+SIL K R+F
Sbjct: 152 LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQF 211

Query: 210 DTAWALIDEMRGGTTGSSLVTPQTLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEF 269
           +T  ++++EM  GT G  L+T +T  I ++ + A  +  KA+  F   K++ FK+G+E  
Sbjct: 212 ETMVSVLEEM--GTKG--LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETI 271

Query: 270 QSLLSALCRYKNVKDAEYLLFCNKDVFPLNTKSFNIVLNGWCNI 314
             LL +L R K  K+A+ L    K+ F  N  ++ ++LNGWC +
Sbjct: 272 NCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 311

[Close]

BLAST of Carg17662 vs. TrEMBL
Match: tr|A0A0A0L308|A0A0A0L308_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118150 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.8e-160
Identity = 439/615 (71.38%), Postives = 459/615 (74.63%), Query Frame = 0


Query: 1   MRSKFCALSLLSHTYFSCSSVKSTQHVVRRVLT-----SGFSSWPTRIHTVYPTTALNSN 60
           MRSK CA SLL  TYFS SSVK   HV  R LT     SGFS WPTRIHTV   T  NSN
Sbjct: 1   MRSKLCAFSLLGRTYFSWSSVKYAHHVNHRALTSATMASGFSLWPTRIHTVDTATVSNSN 60

Query: 61  VGDLFSSGFCSRYYSSPGSNCDILNMPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXMNIE 120
           VGDLFS GFCS  Y SP SN DIL   SE               X              E
Sbjct: 61  VGDLFSLGFCSHSYVSPSSNHDILPATSEQSCHHAAESDHESDDXHDNLEECEE-----E 120

Query: 121 PLNINDKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEA 180
            ++INDKGVI+DVDAIMDIFRGF + +RIQV+NKLEHC IKVSGELVVAVLSRIRNDWEA
Sbjct: 121 DMDINDKGVIKDVDAIMDIFRGFRDANRIQVRNKLEHCFIKVSGELVVAVLSRIRNDWEA 180

Query: 181 AFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLL 240
           AFTFFVWAGKQPGY HS+REYHSMISILGKMRKFDTAWALIDEMRGGT GSSLVTPQTLL
Sbjct: 181 AFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLL 240

Query: 241 IMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDV 300
           IMIRRYCAVHDV KAINTF+AHKRFGF +GLEEFQSLLSALCRYKNVKDAEYLLFCNKDV
Sbjct: 241 IMIRRYCAVHDVAKAINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDV 300

Query: 301 FPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRX 360
           FP NTKSFNI+LNGWC +IGSLRD ER+W+EMT+RGI HDAVSYAS ISCY        X
Sbjct: 301 FPFNTKSFNIILNGWC-VIGSLRDTERVWKEMTRRGISHDAVSYASCISCYXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLEKMRRMGCNPTTET 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RTEEEIFE+L+KMR MGCNPTT+T
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTEEEIFELLKKMRTMGCNPTTDT 480

Query: 481 YIMLIRKFCRWRQLDIVSRIWHEMSENXXXXXXXXXXXXXHGLFLNGKLEDAYKYYLEMK 540
           YIMLIRKFCRWRQLD V          XXXXXXXXXXXXX                    
Sbjct: 481 YIMLIRKFCRWRQLDNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 EKELLPEPKIDEVLKAWLAGKPVIQ---GYMNGSSENXXXXXXXXXXXXXXXXXXXXXXL 600
                  PKIDEVL+ WLAGK V Q      +G  +N                      L
Sbjct: 541 XXXXXXXPKIDEVLQTWLAGKSVFQENPSDCSGEGKN--------------------SSL 589

Query: 601 FPKKIDFHRQPEIRK 608
           FP K DFHRQPEIRK
Sbjct: 601 FPNKNDFHRQPEIRK 589

[Close]

BLAST of Carg17662 vs. TrEMBL
Match: tr|A0A1S3AUX2|A0A1S3AUX2_CUCME (pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483141 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 1.7e-158
Identity = 437/626 (69.81%), Postives = 463/626 (73.96%), Query Frame = 0


Query: 1   MRSKFCALSLLSHTYFSCSSVKSTQHVVRRVLT-----SGFSSWPTRIHTVYPTTALNSN 60
           MRSK CA SLL  TYFS SS+K   HV  R LT     SGFSSWPTRIHTV   T  NSN
Sbjct: 1   MRSKLCAFSLLGRTYFSWSSIKYAHHVNLRALTSVTMASGFSSWPTRIHTVDAATVPNSN 60

Query: 61  VGDLFSSGFCSRYYSSPGSNCDILNMPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXMNIE 120
           +G+ FS GFCS  Y S  SN DILN   E                              E
Sbjct: 61  IGNFFSFGFCSHSYVSSSSNHDILNATPEESCHYAADNDHESGDDHDNLEECEE-----E 120

Query: 121 PLNINDKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRNDWEA 180
            ++IND+GVI+DVDAIMDIFRGF N +RI+VKNKLEHC IKVSGELVVAVLSRIRNDWEA
Sbjct: 121 DMDINDEGVIKDVDAIMDIFRGFRNVNRIEVKNKLEHCFIKVSGELVVAVLSRIRNDWEA 180

Query: 181 AFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQTLL 240
           AFTFFVWAGKQPGY HS+REYHSMISILGKMRKFDTAWALIDEMRGGT GSSLVTPQTLL
Sbjct: 181 AFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTAGSSLVTPQTLL 240

Query: 241 IMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCNKDV 300
           IMIRRYCAVHDV KAINTFHAHKRFGF +GLEEFQSLLSALCRYKNVKDAEYLLFCNKDV
Sbjct: 241 IMIRRYCAVHDVAKAINTFHAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDV 300

Query: 301 FPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNLYRX 360
           FP NTKSFNI+LNGWC IIGSLRD ER+W+EMT+RGI HDA+SYAS ISCYSK+     X
Sbjct: 301 FPFNTKSFNIILNGWC-IIGSLRDTERVWKEMTRRGISHDAISYASSISCYSKVXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLEKMRRMGCNPTTET 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RTEEEIFE+L+KMR MGCNPT +T
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTEEEIFELLKKMRTMGCNPTADT 480

Query: 481 YIMLIRKFCRWRQLDIVSRIWHEMSENXXXXXXXXXXXXXHGLFLNGKLEDAYKYYLEMK 540
           YIMLIRKFCRWRQLD V          XXXXXXXXXXXXX                    
Sbjct: 481 YIMLIRKFCRWRQLDNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 EKELLPEPKIDEVLKAWLAGKPVIQ---GYMNGSSENXXXXXXXXXXXXXXXXXXXXXXL 600
                  PKIDEVL+AWLAG+ + Q      +G  +N                      L
Sbjct: 541 XXXXXXXPKIDEVLQAWLAGRSMFQENPSDCSGEGKN--------------------SRL 599

Query: 601 FPKKIDFHRQPEIRKDRMLRVHDFNR 619
           FP+K DFHRQPEI K    R   F R
Sbjct: 601 FPEK-DFHRQPEIIKGSRDRGFSFWR 599

[Close]

BLAST of Carg17662 vs. TrEMBL
Match: tr|A0A0A0L3P6|A0A0A0L3P6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118130 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 2.6e-156
Identity = 273/328 (83.23%), Postives = 294/328 (89.63%), Query Frame = 0


Query: 655 MERWCGILKVPLHPQSHKFYRVAASLCLSPSSKTLTMPHANAILFNGDRVEGTGNPVIER 714
           M+RW GILKVPL+  S KFYRVA SLCLSP+SKTLT+P  NAI FNGDRVEGTGNPVIER
Sbjct: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60

Query: 715 LSDLQNIADILVSKFGDSTNAWVIEASDFNGPFAIYHDFIPSLNRWGEPKSYTANGFPAS 774
           LS+LQNIA+ILVSKFGDSTNAWV+EASDFNG FAIY DFIPSLNRWGEPKSYT NGFPAS
Sbjct: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120

Query: 775 VSTLSLLGSCYSEVKKIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVVNQLVAELG 834
           +ST+SLLGSCY+EVKKI+SR    S E  ISTL C TP+TIILGFSKGGTVVNQLV ELG
Sbjct: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180

Query: 835 SKDLIAADENPPHSKQAPGVECSKLDEVQFIPNTEQSFLKSITEIHYVDVGLNSHGAYFT 894
           SKDL+AADEN P SKQ  GVECSKLDE+QF+P T QSFLKSITEIHYVDVGLNSHGAY T
Sbjct: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240

Query: 895 DPEVMKRISNSLVQESRGIRFVLHGTPRQWCDSRRVWIRDEKEKMLSLLESEARRSGGRL 954
           DPEV+KRIS+SL+QESRGIRFVLHGTPRQWCD RRVWIRDEKEKM S LESEA RSGG L
Sbjct: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300

Query: 955 QVCERFHFADRPADMQMHFEIIEKLDVC 983
           +V E+F+FADRPADMQMHFEIIEKLDVC
Sbjct: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 328

[Close]

BLAST of Carg17662 vs. TrEMBL
Match: tr|A0A1S3AV17|A0A1S3AV17_CUCME (UPF0565 protein C2orf69 homolog OS=Cucumis melo OX=3656 GN=LOC103483140 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 6.5e-155
Identity = 273/328 (83.23%), Postives = 291/328 (88.72%), Query Frame = 0


Query: 655 MERWCGILKVPLHPQSHKFYRVAASLCLSPSSKTLTMPHANAILFNGDRVEGTGNPVIER 714
           M+RW GILKVPL   S KFYRVA SLCLSP+SKTLT+P ANAI FNGDRVEGTGNPVIE 
Sbjct: 1   MDRWNGILKVPLRSNSRKFYRVAVSLCLSPTSKTLTVPRANAIFFNGDRVEGTGNPVIEG 60

Query: 715 LSDLQNIADILVSKFGDSTNAWVIEASDFNGPFAIYHDFIPSLNRWGEPKSYTANGFPAS 774
           LS+LQNIA+ILVSKFGDSTNAWV+EASDFNG FAIY DFIPSLNRWGEPKSYT NGFPAS
Sbjct: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120

Query: 775 VSTLSLLGSCYSEVKKIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVVNQLVAELG 834
           +ST+SLLGSCY+EVKKI+SR   GS E TI TL   TP+T+ILGFSKGGTVVNQLV ELG
Sbjct: 121 LSTVSLLGSCYNEVKKIVSRGKPGSQETTIPTLSGCTPETVILGFSKGGTVVNQLVTELG 180

Query: 835 SKDLIAADENPPHSKQAPGVECSKLDEVQFIPNTEQSFLKSITEIHYVDVGLNSHGAYFT 894
           SKDLIAADEN P SKQ  GVECSKLDE QFIP TE SFLKSITEIHYVDVGLN+HGAY T
Sbjct: 181 SKDLIAADENLPLSKQESGVECSKLDENQFIPTTEHSFLKSITEIHYVDVGLNTHGAYLT 240

Query: 895 DPEVMKRISNSLVQESRGIRFVLHGTPRQWCDSRRVWIRDEKEKMLSLLESEARRSGGRL 954
           DPEV+KRIS+SL+QESRGIRFVLHGTPRQWCD RRVWIRDEKE M S LESEA RSGG L
Sbjct: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKETMTSFLESEALRSGGNL 300

Query: 955 QVCERFHFADRPADMQMHFEIIEKLDVC 983
           QV E+F+FADRPADMQMHFEIIEKLDVC
Sbjct: 301 QVYEKFYFADRPADMQMHFEIIEKLDVC 328

[Close]

BLAST of Carg17662 vs. TrEMBL
Match: tr|A0A2H5QN55|A0A2H5QN55_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_245560 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 4.4e-127
Identity = 325/448 (72.54%), Postives = 381/448 (85.04%), Query Frame = 0


Query: 113 NIEPLNINDKGVIRDVDAIMDIFRGFWNEDRIQVKNKLEHCCIKVSGELVVAVLSRIRND 172
           +++ L I+D+GV++D   ++DI R F +  R +++NK+E C IKVS ELV  VLS +RND
Sbjct: 93  DVKQLKISDEGVLKDAKTLVDILREF-SHRRSEMRNKIEECGIKVSSELVSEVLSWVRND 152

Query: 173 WEAAFTFFVWAGKQPGYTHSIREYHSMISILGKMRKFDTAWALIDEMRGGTTGSSLVTPQ 232
           WEAAFTFF+WAGKQ GY HS REYH+MI+ILGK+RKFDTAWALIDEMRGG TG SLVT Q
Sbjct: 153 WEAAFTFFLWAGKQSGYAHSTREYHTMIAILGKVRKFDTAWALIDEMRGGETGPSLVTKQ 212

Query: 233 TLLIMIRRYCAVHDVGKAINTFHAHKRFGFKVGLEEFQSLLSALCRYKNVKDAEYLLFCN 292
           TLLI+IRRYCAVHDVG+AIN F+A+KRF F VG+E+FQ LLSALCRYKNV+DAE+L+FCN
Sbjct: 213 TLLILIRRYCAVHDVGRAINAFYAYKRFKFAVGIEDFQGLLSALCRYKNVQDAEHLMFCN 272

Query: 293 KDVFPLNTKSFNIVLNGWCNIIGSLRDAERIWREMTQRGIGHDAVSYASIISCYSKLRNL 352
           KDVFP NTKSFNI+LNGWCNIIGS R+AER+W EM+QRGI +D VS++ IISCYSK RNL
Sbjct: 273 KDVFPFNTKSFNIILNGWCNIIGSSREAERVWMEMSQRGICYDVVSFSCIISCYSKARNL 332

Query: 353 YRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 412
           ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 333 HKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 392

Query: 413 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRTEEEIFEVLEKMRRMGCNPT 472
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +RT EE+F +LE MR+MGC PT
Sbjct: 393 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIVRTGEEVFGLLESMRKMGCQPT 452

Query: 473 TETYIMLIRKFCRWRQLDIVSRIWHEMSENXXXXXXXXXXXXXHGLFLNGKLEDAYKYYL 532
            +TYIMLI+KF RWRQ D V ++W+E+SEN             H LFLNGKLE+A++YY+
Sbjct: 453 NDTYIMLIKKFSRWRQFDNVFKVWNEISENGNGPDRSSYTALIHALFLNGKLEEAHQYYM 512

Query: 533 EMKEKELLPEPKIDEVLKAWLAGKPVIQ 561
           EMKEK+LLPEPK DE+L+ W   K  ++
Sbjct: 513 EMKEKQLLPEPKTDELLQDWSYNKQFVE 539

The following BLAST results are available for this feature:

BLAST of Carg17662 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924384.1	1.1e-225	94.98	pentatricopeptide repeat-containing protein At5g15010, mitochondrial [Cucurbita ...	[more]
XP_023527396.1	3.9e-220	90.12	pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 ...	[more]
XP_022979235.1	2.8e-218	88.89	pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X1 ...	[more]
XP_023527404.1	1.0e-212	98.12	uncharacterized protein LOC111790644 [Cucurbita pepo subsp. pepo]	[more]
XP_023527399.1	1.5e-203	89.62	pentatricopeptide repeat-containing protein At5g15010, mitochondrial isoform X2 ...	[more]

BLAST of Carg17662 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G15010.1	1.9e-99	52.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G44850.1	3.3e-88	54.61	unknown protein	[more]
AT1G80880.1	3.1e-33	32.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G15200.1	2.0e-32	42.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65820.1	4.6e-29	34.47	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Carg17662 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LFQ4\|PP383_ARATH	3.4e-98	52.50	Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop...	[more]
sp\|Q9SAH2\|PP137_ARATH	5.5e-32	32.23	Pentatricopeptide repeat-containing protein At1g80880, mitochondrial OS=Arabidop...	[more]
sp\|Q9LIL5\|PP233_ARATH	3.6e-31	42.46	Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis th...	[more]
sp\|Q9FH87\|PP447_ARATH	8.2e-28	34.47	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]
sp\|Q3EAF8\|PP294_ARATH	2.2e-25	37.20	Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop...	[more]

BLAST of Carg17662 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L308\|A0A0A0L308_CUCSA	1.8e-160	71.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118150 PE=4 SV=1	[more]
tr\|A0A1S3AUX2\|A0A1S3AUX2_CUCME	1.7e-158	69.81	pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Cucumis ...	[more]
tr\|A0A0A0L3P6\|A0A0A0L3P6_CUCSA	2.6e-156	83.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118130 PE=4 SV=1	[more]
tr\|A0A1S3AV17\|A0A1S3AV17_CUCME	6.5e-155	83.23	UPF0565 protein C2orf69 homolog OS=Cucumis melo OX=3656 GN=LOC103483140 PE=4 SV=...	[more]
tr\|A0A2H5QN55\|A0A2H5QN55_CITUN	4.4e-127	72.54	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_245560 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR018881	UPF0565
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17662-RA	Carg17662-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 196..220 e-value: 0.0016 score: 16.5 coord: 510..541 e-value: 7.9E-5 score: 20.6 coord: 407..440 e-value: 9.8E-8 score: 29.7 coord: 337..370 e-value: 3.3E-5 score: 21.8 coord: 373..406 e-value: 1.5E-7 score: 29.2 coord: 475..507 e-value: 1.4E-5 score: 22.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 337..366 e-value: 0.0031 score: 17.5 coord: 196..220 e-value: 0.022 score: 14.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 369..418 e-value: 3.1E-13 score: 49.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 428..481 e-value: 3.0E-5 score: 23.9 coord: 494..541 e-value: 4.7E-5 score: 23.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 405..439 score: 13.066
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 472..506 score: 10.194
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 230..264 score: 6.807
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 370..404 score: 12.299
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 335..369 score: 10.622
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 192..222 score: 7.662
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 299..334 score: 10.106
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 507..541 score: 10.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 312..454 e-value: 9.0E-40 score: 138.9 coord: 455..586 e-value: 6.8E-19 score: 70.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 145..289 e-value: 7.0E-16 score: 60.1
IPR018881	Uncharacterised protein family UPF0565	PFAM	PF10561	UPF0565	coord: 805..944 e-value: 1.1E-9 score: 37.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 563..593
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 83..608
None	No IPR available	PANTHER	PTHR24015:SF227	SUBFAMILY NOT NAMED	coord: 83..608

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17662	Cla021112	Watermelon (97103) v1	carwmB0130
Carg17662	Csa3G118130	Cucumber (Chinese Long) v2	carcuB0145
Carg17662	MELO3C005982	Melon (DHL92) v3.5.1	carmeB0138
Carg17662	ClCG05G000440	Watermelon (Charleston Gray)	carwcgB0128
Carg17662	CSPI03G07480	Wild cucumber (PI 183967)	carcpiB0149
Carg17662	Cucsa.259650	Cucumber (Gy14) v1	carcgyB0165
Carg17662	CmaCh14G021400	Cucurbita maxima (Rimu)	carcmaB0173
Carg17662	CmoCh14G022070	Cucurbita moschata (Rifu)	carcmoB0182
Carg17662	Lsi05G021750	Bottle gourd (USVL1VR-Ls)	carlsiB119
Carg17662	Cp4.1LG03g16050	Cucurbita pepo (Zucchini)	carcpeB0192
Carg17662	CsGy3G007600	Cucumber (Gy14) v2	carcgybB0143
Carg17662	MELO3C005982.2	Melon (DHL92) v3.6.1	carmedB0142
Carg17662	CsaV3_3G007610	Cucumber (Chinese Long) v3	carcucB0153
Carg17662	Cla97C05G080430	Watermelon (97103) v2	carwmbB0138
Carg17662	Bhi01G000405	Wax gourd	carwgoB0166

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17662	Cucurbita maxima (Rimu)	carcmaB0176
Carg17662	Cucurbita maxima (Rimu)	carcmaB0177
Carg17662	Cucurbita moschata (Rifu)	carcmoB0185
Carg17662	Cucurbita pepo (Zucchini)	carcpeB0194