CsGy3G007600 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G007600
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	UPF0565 protein C2orf69 homolog
Location	Chr3 : 6567010 .. 6568811 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATAATACAAATTCATTGGAAGTCTAATATCATATTATACAAATTTTAGTCTATGATTCAATGTGGAGTACATCATTCCCAAAATTGGATGACACAATACGAACATTCTACGGACTTCAATTTAATCTAAAATAGGGGGGAAAGCAGAAATTGTAATGTTTCTGTAGCCGATTCAATTGAAGCATCTTGTTGACGATAACGATGGATCGTTGGAATGGAATTTTGAAGGTTCCATTGAATTCAAACAGCCGCAAGTTTTATAGAGTTGCGGTGTCACTCTGCCTTTCCCCAACCTCCAAAACATTGACGGTAAGTTTTGAAATATTCTAATTCCCCTGAACTACACACCGTCCTTTCAGATTGAGGGAAATACTGTATACTGTTTTGTTAGGTTCCTCGTGGAAACGCCATCTTCTTTAATGGGGATCGGGTTGAAGGGACGGGAAATCCAGTGATTGAGAGGTTGTCTAATCTACAGAACATAGCTGAAATTTTAGTTTCGAAATTTGGAGATTCCACCAATGCATGGGTTGTCGAGGCTTCTGATTTCAATGGAGCTTTTGCTATATATCAGGATTTTATACCTTCTCTCAATCGGTGGGGTGAACCAAAATCATATACTCCAAATGGGTTCCCTGCTTCACTGTCAACCGTTTCACTTTTGGGAAGTTGCTACAATGAGGTATTGTCTAAATGTGTCTTTTGAGTCAACAACATAGGGTGTGGTTTATTTGAATATATAACTATTTGGTTTATTAGTGGAATGGTATGCCGAAACTGGTTCCGTTACGCTCAACGAAGATTCGAATCCTCACTTCTTGATTAATGGCGTATGGCTAAACCAGAAAAGATTCGACTCCATGACCTCTTAGCGGTGATGTATGCCTAAACCTGTTGAGCTACATGGTTGAAAGATTCAAATATTTAACCACTTGGTCGAGGGTGTGTGTAAGGCTAAACTAACTAAGCTATGTATGCCTACACCTGCTGAGCTATGATTTAGATATTTGAATCTCCCACCTTTGATCGAGGGTGTGTATGTCTAGATTAGCTAAGCTATGGATGCCAAAACCTGTTGTACTATGGTTGAGAGATTCAAATCTATTAGCTTTGGTTGAAAGTCTGTATGTCTAAACTAATTAAGCTATGCTTATGTTGACTGATTGCTTGCGATTTTGAGGTGAACTCATGCACTTAGTTGTGGATTTGGCAGGTAAAGAAGATAGTTTCTAGGGGAAAACCAAGATCACAGGAAACCGCCATATCTACACTGAGCTGCTGCACCCCCGAAACAATCATTCTTGGATTTAGCAAGGGTGGTACTGTGGTTAACCAGCTAGTTACTGAACTTGGCTCCAAGGACTTGATGGCTGCTGATGAAAATCTACCTCTTTCTAAGCAAGAATCGGGTGTTGAATGTTCTAAACTTGATGAGATTCAGTTCGTACCAACTACAGGACAAAGCTTTTTGAAAAGCATAACAGAGATTCATTATGTGGATGTTGGGTTGAACTCCCATGGTGCATACCTTACAGACCCTGAGGTAATCAAAAGAATCTCCAGCAGTCTTATTCAGGAGTCAAGAGGAATCCGTTTTGTTCTTCATGGTACTCCAAGACAATGGTGTGATCGCAGAAGAGTTTGGATACGAGATGAGAAGGAAAAAATGAGGAGTTTTCTTGAATCTGAAGCTCTGAGAAGTGGAGGAAACTTGAAGGTTAATGAGAAATTTTATTTTGCTGATAGACCTGCGGACATGCAGATGCATTTTGAAATAATTGAAAAGTTGGATGTTTGTTGA

mRNA sequence

CTATAATACAAATTCATTGGAAGTCTAATATCATATTATACAAATTTTAGTCTATGATTCAATGTGGAGTACATCATTCCCAAAATTGGATGACACAATACGAACATTCTACGGACTTCAATTTAATCTAAAATAGGGGGGAAAGCAGAAATTGTAATGTTTCTGTAGCCGATTCAATTGAAGCATCTTGTTGACGATAACGATGGATCGTTGGAATGGAATTTTGAAGGTTCCATTGAATTCAAACAGCCGCAAGTTTTATAGAGTTGCGGTGTCACTCTGCCTTTCCCCAACCTCCAAAACATTGACGGTTCCTCGTGGAAACGCCATCTTCTTTAATGGGGATCGGGTTGAAGGGACGGGAAATCCAGTGATTGAGAGGTTGTCTAATCTACAGAACATAGCTGAAATTTTAGTTTCGAAATTTGGAGATTCCACCAATGCATGGGTTGTCGAGGCTTCTGATTTCAATGGAGCTTTTGCTATATATCAGGATTTTATACCTTCTCTCAATCGGTGGGGTGAACCAAAATCATATACTCCAAATGGGTTCCCTGCTTCACTGTCAACCGTTTCACTTTTGGGAAGTTGCTACAATGAGAAGATAGTTTCTAGGGGAAAACCAAGATCACAGGAAACCGCCATATCTACACTGAGCTGCTGCACCCCCGAAACAATCATTCTTGGATTTAGCAAGGGTGGTACTGTGGTTAACCAGCTAGTTACTGAACTTGGCTCCAAGGACTTGATGGCTGCTGATGAAAATCTACCTCTTTCTAAGCAAGAATCGGGTGTTGAATGTTCTAAACTTGATGAGATTCAGTTCGTACCAACTACAGGACAAAGCTTTTTGAAAAGCATAACAGAGATTCATTATGTGGATGTTGGGTTGAACTCCCATGGTGCATACCTTACAGACCCTGAGGTAATCAAAAGAATCTCCAGCAGTCTTATTCAGGAGTCAAGAGGAATCCGTTTTGTTCTTCATGGTACTCCAAGACAATGGTGTGATCGCAGAAGAGTTTGGATACGAGATGAGAAGGAAAAAATGAGGAGTTTTCTTGAATCTGAAGCTCTGAGAAGTGGAGGAAACTTGAAGGTTAATGAGAAATTTTATTTTGCTGATAGACCTGCGGACATGCAGATGCATTTTGAAATAATTGAAAAGTTGGATGTTTGTTGA

Coding sequence (CDS)

ATGGATCGTTGGAATGGAATTTTGAAGGTTCCATTGAATTCAAACAGCCGCAAGTTTTATAGAGTTGCGGTGTCACTCTGCCTTTCCCCAACCTCCAAAACATTGACGGTTCCTCGTGGAAACGCCATCTTCTTTAATGGGGATCGGGTTGAAGGGACGGGAAATCCAGTGATTGAGAGGTTGTCTAATCTACAGAACATAGCTGAAATTTTAGTTTCGAAATTTGGAGATTCCACCAATGCATGGGTTGTCGAGGCTTCTGATTTCAATGGAGCTTTTGCTATATATCAGGATTTTATACCTTCTCTCAATCGGTGGGGTGAACCAAAATCATATACTCCAAATGGGTTCCCTGCTTCACTGTCAACCGTTTCACTTTTGGGAAGTTGCTACAATGAGAAGATAGTTTCTAGGGGAAAACCAAGATCACAGGAAACCGCCATATCTACACTGAGCTGCTGCACCCCCGAAACAATCATTCTTGGATTTAGCAAGGGTGGTACTGTGGTTAACCAGCTAGTTACTGAACTTGGCTCCAAGGACTTGATGGCTGCTGATGAAAATCTACCTCTTTCTAAGCAAGAATCGGGTGTTGAATGTTCTAAACTTGATGAGATTCAGTTCGTACCAACTACAGGACAAAGCTTTTTGAAAAGCATAACAGAGATTCATTATGTGGATGTTGGGTTGAACTCCCATGGTGCATACCTTACAGACCCTGAGGTAATCAAAAGAATCTCCAGCAGTCTTATTCAGGAGTCAAGAGGAATCCGTTTTGTTCTTCATGGTACTCCAAGACAATGGTGTGATCGCAGAAGAGTTTGGATACGAGATGAGAAGGAAAAAATGAGGAGTTTTCTTGAATCTGAAGCTCTGAGAAGTGGAGGAAACTTGAAGGTTAATGAGAAATTTTATTTTGCTGATAGACCTGCGGACATGCAGATGCATTTTGAAATAATTGAAAAGTTGGATGTTTGTTGA

Protein sequence

MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIERLSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPASLSTVSLLGSCYNEKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELGSKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLTDPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNLKVNEKFYFADRPADMQMHFEIIEKLDVC

Homology

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BLAST of CsGy3G007600 vs. NCBI nr
Match: XP_011650653.1 (PREDICTED: UPF0565 protein C2orf69 homolog [Cucumis sativus] >KGN56378.1 hypothetical protein Csa_3G118130 [Cucumis sativus])

HSP 1 Score: 658.3 bits (1697), Expect = 1.4e-185
Identity = 326/328 (99.39%), Postives = 326/328 (99.39%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER
Sbjct: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS
Sbjct: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120

Query: 121 LSTVSLLGSCYNE--KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           LSTVSLLGSCYNE  KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG
Sbjct: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT
Sbjct: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL
Sbjct: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 327
           KVNEKFYFADRPADMQMHFEIIEKLDVC
Sbjct: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 328

[Close]

BLAST of CsGy3G007600 vs. NCBI nr
Match: XP_008437824.1 (PREDICTED: UPF0565 protein C2orf69 homolog [Cucumis melo])

HSP 1 Score: 619.8 bits (1597), Expect = 5.4e-174
Identity = 308/328 (93.90%), Postives = 313/328 (95.43%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRWNGILKVPL SNSRKFYRVAVSLCLSPTSKTLTVPR NAIFFNGDRVEGTGNPVIE 
Sbjct: 1   MDRWNGILKVPLRSNSRKFYRVAVSLCLSPTSKTLTVPRANAIFFNGDRVEGTGNPVIEG 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS
Sbjct: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120

Query: 121 LSTVSLLGSCYNE--KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           LSTVSLLGSCYNE  KIVSRGKP SQET I TLS CTPET+ILGFSKGGTVVNQLVTELG
Sbjct: 121 LSTVSLLGSCYNEVKKIVSRGKPGSQETTIPTLSGCTPETVILGFSKGGTVVNQLVTELG 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDL+AADENLPLSKQESGVECSKLDE QF+PTT  SFLKSITEIHYVDVGLN+HGAYLT
Sbjct: 181 SKDLIAADENLPLSKQESGVECSKLDENQFIPTTEHSFLKSITEIHYVDVGLNTHGAYLT 240

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKE M SFLESEALRSGGNL
Sbjct: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKETMTSFLESEALRSGGNL 300

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 327
           +V EKFYFADRPADMQMHFEIIEKLDVC
Sbjct: 301 QVYEKFYFADRPADMQMHFEIIEKLDVC 328

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BLAST of CsGy3G007600 vs. NCBI nr
Match: XP_022924396.1 (uncharacterized protein LOC111431905 [Cucurbita moschata])

HSP 1 Score: 550.8 bits (1418), Expect = 3.1e-153
Identity = 270/328 (82.32%), Postives = 291/328 (88.72%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           M+RW GILKVPL+  S KFYRVA SLCLSPTSKTLT+P  NAI FNGDRVEGTGNPVIER
Sbjct: 1   MERWCGILKVPLHPQSHKFYRVAASLCLSPTSKTLTMPHANAILFNGDRVEGTGNPVIER 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+LQNIA+ILVSKFGDSTNAWV+EASDFNG FAIY DF+ SLNRWGEPKSYT NGFPAS
Sbjct: 61  LSDLQNIADILVSKFGDSTNAWVIEASDFNGPFAIYHDFMHSLNRWGEPKSYTANGFPAS 120

Query: 121 LSTVSLLGSCYNE--KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           +ST+SLLGSCY+E  KI+SR    S E  ISTL C TP+TIILGFSKGGTVVNQLV ELG
Sbjct: 121 VSTLSLLGSCYSEVKKIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVVNQLVAELG 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDL+AADEN P SKQ  GVECSKLDE+QF+P T QSFLKSITEIHYVDVGLNSHGAY T
Sbjct: 181 SKDLIAADENPPHSKQAPGVECSKLDEVQFIPNTEQSFLKSITEIHYVDVGLNSHGAYFT 240

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRIS+SL+QESRGIRF+LHGTPRQWCD RRVWIRDEKEKM S LESEA RSGG L
Sbjct: 241 DPEVIKRISNSLVQESRGIRFILHGTPRQWCDSRRVWIRDEKEKMSSLLESEARRSGGRL 300

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 327
           +V E+F+FADRPADMQMHFEIIEKLDVC
Sbjct: 301 QVCERFHFADRPADMQMHFEIIEKLDVC 328

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BLAST of CsGy3G007600 vs. NCBI nr
Match: XP_023527404.1 (uncharacterized protein LOC111790644 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 550.4 bits (1417), Expect = 4.0e-153
Identity = 271/328 (82.62%), Postives = 290/328 (88.41%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           M+RW GILKVPL+  S KFYRVA SLCLSPTSKTLT P  NAI FNGDRVEGTGNPVIER
Sbjct: 46  MERWCGILKVPLHPQSHKFYRVAASLCLSPTSKTLTTPHANAILFNGDRVEGTGNPVIER 105

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+ QNIA+ILVSKFGDSTNAWV+EASDFNG FAIY DFIPSLNRWGEPKSYT NGFPAS
Sbjct: 106 LSDPQNIADILVSKFGDSTNAWVIEASDFNGPFAIYHDFIPSLNRWGEPKSYTANGFPAS 165

Query: 121 LSTVSLLGSCYNE--KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           +ST+SLLGSCY+E  KI+SR    S E  ISTL C TP+TIILGFSKGGTVVNQLV ELG
Sbjct: 166 VSTLSLLGSCYSEVKKIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVVNQLVAELG 225

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDL+AADEN P SKQ  GVECSKLDE+QF+P T QSFLKSITEIHYVDVGLNS GAY T
Sbjct: 226 SKDLIAADENPPHSKQAPGVECSKLDEVQFIPNTEQSFLKSITEIHYVDVGLNSQGAYFT 285

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRIS+SL+QESRGIRFVLHGTPRQWCD RRVWIRDEK+KM SFLESEA RSGG L
Sbjct: 286 DPEVIKRISNSLVQESRGIRFVLHGTPRQWCDSRRVWIRDEKDKMLSFLESEARRSGGRL 345

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 327
           +V E+F+FADRPADMQMHFEIIEKLDVC
Sbjct: 346 QVCERFHFADRPADMQMHFEIIEKLDVC 373

[Close]

BLAST of CsGy3G007600 vs. NCBI nr
Match: XP_022979247.1 (uncharacterized protein LOC111479029 [Cucurbita maxima])

HSP 1 Score: 538.1 bits (1385), Expect = 2.1e-149
Identity = 266/328 (81.10%), Postives = 286/328 (87.20%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           M+RW GILKVPL+    +FYRVA SLCLSPTSKTLT+P  NAI FNGDRVEGTGNPVIER
Sbjct: 61  MERWCGILKVPLHPQCHRFYRVAASLCLSPTSKTLTMPHANAILFNGDRVEGTGNPVIER 120

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+LQNIA+ILVSKFGDSTNAWV+EASDFNG FAIY DFIPSLNRWGEPKSYT NGFPAS
Sbjct: 121 LSDLQNIADILVSKFGDSTNAWVIEASDFNGPFAIYHDFIPSLNRWGEPKSYTANGFPAS 180

Query: 121 LSTVSLLGSCYNE--KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           +ST+SLLGSCY+E  KI+SR    S E  ISTL C TP+TIILGFSKGGTV NQLV ELG
Sbjct: 181 VSTLSLLGSCYSEVKKIISRRNQGSPEATISTLGCSTPKTIILGFSKGGTVANQLVAELG 240

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDL+AADEN P SKQ  GVECSKLDE QF+P T QSFLKSITEIHYVDVGLNS GAY T
Sbjct: 241 SKDLIAADENPPHSKQAPGVECSKLDEDQFIPNTEQSFLKSITEIHYVDVGLNSQGAYFT 300

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPE IKRIS+SL+QESRGIRFVLHGTPRQW D RRVWIRDEK+KM S LESEA RSGG L
Sbjct: 301 DPEAIKRISNSLVQESRGIRFVLHGTPRQWGDSRRVWIRDEKDKMLSLLESEARRSGGRL 360

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 327
           +V E+F+FADRPADMQMHFEIIEKLDVC
Sbjct: 361 QVCERFHFADRPADMQMHFEIIEKLDVC 388

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BLAST of CsGy3G007600 vs. TAIR10
Match: AT2G44850.1 (unknown protein)

HSP 1 Score: 318.2 bits (814), Expect = 6.1e-87
Identity = 158/289 (54.67%), Postives = 213/289 (73.70%), Query Frame = 0


Query: 37  VPRGNAIFFNGDRVEGTGNPVIERLSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIY 96
           VP  NAIFF+GD+V+ TGN VIERL +LQ +AEI+VSKFG+S NAWVVEAS FNG FAIY
Sbjct: 117 VPSANAIFFHGDKVQDTGNHVIERLYDLQKVAEIIVSKFGNSVNAWVVEASVFNGPFAIY 176

Query: 97  QDFIPSLNRWGEPKSYTPNGFPASLSTVSLLGSCYNEKIVSRGKPRSQETAISTLSCCTP 156
           +DF+PS+N  G PKSY+P GFPAS S VSLL SC +E ++  G        I+++  C P
Sbjct: 177 KDFVPSVNHMGAPKSYSPVGFPASSSIVSLLSSCLHE-VLKEGTDVCLIDQIASVHHC-P 236

Query: 157 ETIILGFSKGGTVVNQLVTELGSKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSF 216
           +TI+LGFSKGG V+NQL++E+ S D   A  +  + ++ +    S+ ++IQ +P + +SF
Sbjct: 237 KTIVLGFSKGGVVMNQLMSEISSLDTNFAKTSSAMVEEST----SQHEKIQIIPASKESF 296

Query: 217 LKSITEIHYVDVGLNSHGAYLTDPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWI 276
           L SI+E+HY+DVGLNS GAY+TD  V++RIS  L + +  +R V+HGTPRQWCD  R WI
Sbjct: 297 LNSISEVHYIDVGLNSSGAYITDHNVVQRISQRLARGADSLRIVIHGTPRQWCDELRGWI 356

Query: 277 RDEKEKMRSFLESEALRSGGNLKVNEKFYFADRPADMQMHFEIIEKLDV 326
           R EK+++   L++E   SGG L+V E+FYF+DR AD+QMHFEII+ +DV
Sbjct: 357 RKEKDELVRLLKAETENSGGKLQVCERFYFSDRLADLQMHFEIIDAMDV 399

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BLAST of CsGy3G007600 vs. TrEMBL
Match: tr|A0A0A0L3P6|A0A0A0L3P6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118130 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 9.0e-186
Identity = 326/328 (99.39%), Postives = 326/328 (99.39%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER
Sbjct: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS
Sbjct: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120

Query: 121 LSTVSLLGSCYNE--KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           LSTVSLLGSCYNE  KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG
Sbjct: 121 LSTVSLLGSCYNEVKKIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT
Sbjct: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL
Sbjct: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 327
           KVNEKFYFADRPADMQMHFEIIEKLDVC
Sbjct: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 328

[Close]

BLAST of CsGy3G007600 vs. TrEMBL
Match: tr|A0A1S3AV17|A0A1S3AV17_CUCME (UPF0565 protein C2orf69 homolog OS=Cucumis melo OX=3656 GN=LOC103483140 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 3.6e-174
Identity = 308/328 (93.90%), Postives = 313/328 (95.43%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRWNGILKVPL SNSRKFYRVAVSLCLSPTSKTLTVPR NAIFFNGDRVEGTGNPVIE 
Sbjct: 1   MDRWNGILKVPLRSNSRKFYRVAVSLCLSPTSKTLTVPRANAIFFNGDRVEGTGNPVIEG 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS
Sbjct: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120

Query: 121 LSTVSLLGSCYNE--KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
           LSTVSLLGSCYNE  KIVSRGKP SQET I TLS CTPET+ILGFSKGGTVVNQLVTELG
Sbjct: 121 LSTVSLLGSCYNEVKKIVSRGKPGSQETTIPTLSGCTPETVILGFSKGGTVVNQLVTELG 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYLT 240
           SKDL+AADENLPLSKQESGVECSKLDE QF+PTT  SFLKSITEIHYVDVGLN+HGAYLT
Sbjct: 181 SKDLIAADENLPLSKQESGVECSKLDENQFIPTTEHSFLKSITEIHYVDVGLNTHGAYLT 240

Query: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGNL 300
           DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKE M SFLESEALRSGGNL
Sbjct: 241 DPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKETMTSFLESEALRSGGNL 300

Query: 301 KVNEKFYFADRPADMQMHFEIIEKLDVC 327
           +V EKFYFADRPADMQMHFEIIEKLDVC
Sbjct: 301 QVYEKFYFADRPADMQMHFEIIEKLDVC 328

[Close]

BLAST of CsGy3G007600 vs. TrEMBL
Match: tr|A0A2I4HEB4|A0A2I4HEB4_9ROSI (uncharacterized protein LOC109016560 isoform X1 OS=Juglans regia OX=51240 GN=LOC109016560 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 6.6e-112
Identity = 206/328 (62.80%), Postives = 246/328 (75.00%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRW G+LKVPL S+S  +YRVA SLCLSPTSKTL VP  NAIFFNGDRVEGTGN VIER
Sbjct: 8   MDRWCGVLKVPLCSDSGPYYRVAASLCLSPTSKTLAVPSANAIFFNGDRVEGTGNSVIER 67

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+ + IA +LVSKFG S NAWV E+S FNG FA+Y+DFIPS+NRWGEPKSY+P GFPAS
Sbjct: 68  LSDPKTIAGLLVSKFGTSVNAWVFESSIFNGPFAVYKDFIPSVNRWGEPKSYSPLGFPAS 127

Query: 121 LSTVSLLGSCYNE--KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
            ST+SLL +C  E   ++SR +     T +  L    P+T+ILGFSKGGTV+NQL+TEL 
Sbjct: 128 RSTISLLSNCLKEVKNVISRIEGEQHPTNVPALHFSQPKTLILGFSKGGTVINQLITELS 187

Query: 181 SKDLMAADENLPLSKQESGVECSKLDE-IQFVPTTGQSFLKSITEIHYVDVGLNSHGAYL 240
           S D+M         +Q  G +CS   E I+ +P   ++ L SITE+HYVDVGLNS GAYL
Sbjct: 188 SSDVMLTGNKSYTEEQSRGGQCSNFSEAIKIIPDMEETLLNSITEVHYVDVGLNSSGAYL 247

Query: 241 TDPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGN 300
           TD  VI+RI   + Q ++GIRF+LHGTPRQWCD RR WIR EK+K+   LES A RSGG 
Sbjct: 248 TDHAVIERIYKRVTQGAKGIRFLLHGTPRQWCDSRRNWIRTEKDKLVHMLESAARRSGGK 307

Query: 301 LKVNEKFYFADRPADMQMHFEIIEKLDV 326
           L+V E+FY ADRP +MQMHFEIIEKL+V
Sbjct: 308 LQVCERFYCADRPPNMQMHFEIIEKLNV 335

[Close]

BLAST of CsGy3G007600 vs. TrEMBL
Match: tr|A0A2I4HEB5|A0A2I4HEB5_9ROSI (uncharacterized protein LOC109016560 isoform X2 OS=Juglans regia OX=51240 GN=LOC109016560 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 6.6e-112
Identity = 206/328 (62.80%), Postives = 246/328 (75.00%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           MDRW G+LKVPL S+S  +YRVA SLCLSPTSKTL VP  NAIFFNGDRVEGTGN VIER
Sbjct: 1   MDRWCGVLKVPLCSDSGPYYRVAASLCLSPTSKTLAVPSANAIFFNGDRVEGTGNSVIER 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+ + IA +LVSKFG S NAWV E+S FNG FA+Y+DFIPS+NRWGEPKSY+P GFPAS
Sbjct: 61  LSDPKTIAGLLVSKFGTSVNAWVFESSIFNGPFAVYKDFIPSVNRWGEPKSYSPLGFPAS 120

Query: 121 LSTVSLLGSCYNE--KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
            ST+SLL +C  E   ++SR +     T +  L    P+T+ILGFSKGGTV+NQL+TEL 
Sbjct: 121 RSTISLLSNCLKEVKNVISRIEGEQHPTNVPALHFSQPKTLILGFSKGGTVINQLITELS 180

Query: 181 SKDLMAADENLPLSKQESGVECSKLDE-IQFVPTTGQSFLKSITEIHYVDVGLNSHGAYL 240
           S D+M         +Q  G +CS   E I+ +P   ++ L SITE+HYVDVGLNS GAYL
Sbjct: 181 SSDVMLTGNKSYTEEQSRGGQCSNFSEAIKIIPDMEETLLNSITEVHYVDVGLNSSGAYL 240

Query: 241 TDPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGN 300
           TD  VI+RI   + Q ++GIRF+LHGTPRQWCD RR WIR EK+K+   LES A RSGG 
Sbjct: 241 TDHAVIERIYKRVTQGAKGIRFLLHGTPRQWCDSRRNWIRTEKDKLVHMLESAARRSGGK 300

Query: 301 LKVNEKFYFADRPADMQMHFEIIEKLDV 326
           L+V E+FY ADRP +MQMHFEIIEKL+V
Sbjct: 301 LQVCERFYCADRPPNMQMHFEIIEKLNV 328

[Close]

BLAST of CsGy3G007600 vs. TrEMBL
Match: tr|A0A2P4H5D1|A0A2P4H5D1_QUESU (Upf0565 protein OS=Quercus suber OX=58331 GN=CFP56_27173 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 8.6e-112
Identity = 205/328 (62.50%), Postives = 246/328 (75.00%), Query Frame = 0


Query: 1   MDRWNGILKVPLNSNSRKFYRVAVSLCLSPTSKTLTVPRGNAIFFNGDRVEGTGNPVIER 60
           M RW G+LKVPL  NS  +YRVA SLCLSPT+K L  P  NAIFFNGDR+EGTGNPVIER
Sbjct: 1   MGRWIGVLKVPLGLNSGNYYRVAASLCLSPTTKNLAEPSANAIFFNGDRIEGTGNPVIER 60

Query: 61  LSNLQNIAEILVSKFGDSTNAWVVEASDFNGAFAIYQDFIPSLNRWGEPKSYTPNGFPAS 120
           LS+LQNIAEILVSKFG S NAWV+EAS FNG FA+Y+DFIPS+N+WGEPKSY+P G+PAS
Sbjct: 61  LSDLQNIAEILVSKFGGSINAWVIEASVFNGPFAVYKDFIPSVNQWGEPKSYSPTGYPAS 120

Query: 121 LSTVSLLGSCYNE--KIVSRGKPRSQETAISTLSCCTPETIILGFSKGGTVVNQLVTELG 180
            +TVSLL +C  E  KI+   +      +IS      P+T ILGFSKGGTV+NQLVTEL 
Sbjct: 121 RTTVSLLSNCLEEVKKIIPGRQKEQSPASISASHLPQPKTFILGFSKGGTVLNQLVTELS 180

Query: 181 SKDLMAADENLPLSKQESGVECSKL-DEIQFVPTTGQSFLKSITEIHYVDVGLNSHGAYL 240
             D+     +    +Q +  + S   +EI+ +P T +  L SITEIHYVDVGLNS GAYL
Sbjct: 181 FSDVKFTGNSPHTEEQSTSNKHSNFTEEIKIIPNTEEGLLNSITEIHYVDVGLNSSGAYL 240

Query: 241 TDPEVIKRISSSLIQESRGIRFVLHGTPRQWCDRRRVWIRDEKEKMRSFLESEALRSGGN 300
           T+ + I+RIS  L Q  +GIRFVLHGTPRQWCD RR+WI +EK+K+   LESEA RSGG 
Sbjct: 241 TNHDAIERISKRLTQGGKGIRFVLHGTPRQWCDSRRIWILNEKDKLVHMLESEADRSGGK 300

Query: 301 LKVNEKFYFADRPADMQMHFEIIEKLDV 326
           L+V E+FYFA +P D+QMHFEIIEK+DV
Sbjct: 301 LQVCERFYFAKKPPDLQMHFEIIEKMDV 328

The following BLAST results are available for this feature:

BLAST of CsGy3G007600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650653.1	1.4e-185	99.39	PREDICTED: UPF0565 protein C2orf69 homolog [Cucumis sativus] >KGN56378.1 hypothe...	[more]
XP_008437824.1	5.4e-174	93.90	PREDICTED: UPF0565 protein C2orf69 homolog [Cucumis melo]	[more]
XP_022924396.1	3.1e-153	82.32	uncharacterized protein LOC111431905 [Cucurbita moschata]	[more]
XP_023527404.1	4.0e-153	82.62	uncharacterized protein LOC111790644 [Cucurbita pepo subsp. pepo]	[more]
XP_022979247.1	2.1e-149	81.10	uncharacterized protein LOC111479029 [Cucurbita maxima]	[more]

BLAST of CsGy3G007600 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44850.1	6.1e-87	54.67	unknown protein	[more]

BLAST of CsGy3G007600 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G007600 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3P6\|A0A0A0L3P6_CUCSA	9.0e-186	99.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118130 PE=4 SV=1	[more]
tr\|A0A1S3AV17\|A0A1S3AV17_CUCME	3.6e-174	93.90	UPF0565 protein C2orf69 homolog OS=Cucumis melo OX=3656 GN=LOC103483140 PE=4 SV=...	[more]
tr\|A0A2I4HEB4\|A0A2I4HEB4_9ROSI	6.6e-112	62.80	uncharacterized protein LOC109016560 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4HEB5\|A0A2I4HEB5_9ROSI	6.6e-112	62.80	uncharacterized protein LOC109016560 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2P4H5D1\|A0A2P4H5D1_QUESU	8.6e-112	62.50	Upf0565 protein OS=Quercus suber OX=58331 GN=CFP56_27173 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018881	UPF0565

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G007600.1	CsGy3G007600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018881	Uncharacterised protein family UPF0565	PFAM	PF10561	UPF0565	coord: 138..288 e-value: 3.9E-10 score: 39.3
IPR018881	Uncharacterised protein family UPF0565	PANTHER	PTHR31296	FAMILY NOT NAMED	coord: 23..325

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G007600	Cla021112	Watermelon (97103) v1	cgybwmB217
CsGy3G007600	Csa3G118130	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G007600	MELO3C005982	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G007600	ClCG05G000440	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G007600	CSPI03G07480	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G007600	CmaCh14G021410	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G007600	CmoCh14G022080	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G007600	Cp4.1LG03g16040	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G007600	MELO3C005982.2	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G007600	CsaV3_3G007610	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G007600	Cla97C05G080430	Watermelon (97103) v2	cgybwmbB196
CsGy3G007600	Bhi01G000406	Wax gourd	cgybwgoB272
CsGy3G007600	Carg17662	Silver-seed gourd	carcgybB0143

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G007600	Cucurbita maxima (Rimu)	cgybcmaB430
CsGy3G007600	Cucurbita maxima (Rimu)	cgybcmaB443
CsGy3G007600	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G007600	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G007600	Bottle gourd (USVL1VR-Ls)	cgyblsiB196
CsGy3G007600	Silver-seed gourd	carcgybB0980