CsaV3_3G002190 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G002190
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	coiled-coil domain-containing protein 97
Location	chr3 : 1770309 .. 1774309 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGAATTAAAGGTGGAATGTAACTTCAATCGGTGCATGGGTACAGTAATCGACTTGCCAAACACGCTCACAACAAAAAATATTTTCATGGGACTCTATCTTCACGTGCTGCTCACGTGTTTAATCCTTTTGCTCGTCACCGACTGAGCCGGCCGAGGGTTTATTATTCACCGGGGAAGAGCGCGGCGGCGAGAGAACAAACATGGAGACGGCGGAAACAGCCGGTGCAAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTTCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTATTTCTTGGTTCTCTCTCTCTCTCTCTCTATAATTCTGTATTTTTTTTTGCAATTTCTGGCATGGATTTCTGTTGTATGTTGATTATTTCATCTGAAGTTATAAGATCCCTAGCTTACTTTATCGAATTGGAACAAAATAAAGGGAGATTTTGAAGGAGTAGATTTATGCTTGTTTTATATGGTAGAGTGTCAGAATTCTGAGTCGCATGGTTCCATTTAGCTCATAGTGTAATGGATGAAAAAATGACACTAGTTACATTAGAAGATTGAACTCCATTTGTTTTTTGAAAATTAAGTTATAAACTTACTTCCACTTTTTCTTTGTTTTGCTAAGAATTCAATTTTTGGTTGAGGAAGGATGAAAACAAAGGTAAGAAAATGCTGAGGAAACAAACAAGTAGAATTTTTTAGTATTGAATGTTTATCAAAGGAGACTCTGTAGAATGAAGCAGTGAATACCAAATTATAAAATAATAGTGGTTTTAATTTCTTTTCATGTGTTTGGGTGTTTTACAGTCGAGAGGAAGGAATAAATTTTGATGCATTAGTTCTTTTGTTATTTATGAAGCAATTTTCTTGTAGGTTTTTTGAATCATTTTTAAGCTTTGAAAACGAAAGAGTTCAGCATCTCCTTCATTTGCACACTTTTTGCTACTGGAAATGAGGGGGGAAAATAACTTTGGCTTTATTTGAATTATGGGAAACAAATGTCTTGAATTCATAACATATAGAAACTGATTTGGTAATTAGTTTGATTTTAATCCTTGAATGCTGCTTCTTTCTGTTCATTTTAAATATTCTAATGTTTGTTGCACCTCTAACTTCAATTGATGTAGAACGATATGGATCACAGTTGACATCCAATGAACTGCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAACCCAACATCAGATGAATTACACACTAGGTCAGTTATTGTGAAAAATAGGAGACGGGCATATCTAAATAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTCTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGGTAGGTAATAATGTAAATCAAGGGGAAGAGGAAGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAGGAAGAGAAAGAGGAAGTGGGGGAGGACACGAAAGGTAATAATAAGCTTGCGAATGGAGCTGATTCCATGGAGGTAATTTTGTGTTATCTCTTTTGTCTCATCCTTTGATTTCCTTTACAAATAACTTTTTTTTTATTAGTTTGATTATTCTGGTTGGCTTGCTTAACTGGTTTTTAGATCAGTCTTATGATTTATTCTGCCTTGTTCATTATTCTTCTCCTTTTGCAATCTGAAGTCCTGCCTATTTAACCAATACCAGGCTTTTAATGCTTATAATTTTTTTTTGGATATTAATGTTTTATACATCTGATCATTGTGGATTGAACGAAATAACATATCTGAATGCATTATGCTTTGTGGAGATCACTTGTCCTCGATAATGAGTTGTTTGACATTTGATGCTTTCGCTTGTAGATAACAAGGGCCATGGATGATCAGCATGAAATGCCAGCAACAGAGAATAGTGAAGCTGCTGAGGGTGGGTCTAATCATGTAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGATCAATTCACATATATCATGCATCAGAAATTTTTGTTGGGAGAAGACAACGAGCATTTAGATTACTCAAAAATAGACAATGATGAGACCTTGGACGATCACTGGATGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCGATGAAGATTAGAGCGAACGAAAGGTGCAGTTCCTTTCATCTAATTGTAAAAAATTTATGTTAAATTGGTACCTGTATATCAGATGCTTTCTGGCCTTTTATATTTTATAACCTCTCAAACTTTCTAGTGTTTAAGCATGGAAATACATAGATAGTGACAAGTCTTTCTTCTTTAATCTGAGAGTAGAATTTGAATTCCTGTTAGACTGCTTTTAGAATGTGCTCAATTTAACTATTAGATGCCAAAGGACGGGTGTAAGTTCAAATAGGAGCACTCCTTATTTTGTCTTTAATCTTTCAAAAGACCTGTTTTTGTATTTGAATTTAGGGATCCTTTCCGTTTTCGTCAAAAAATGTTTAGGGTAGTACCTATTCAAAAACTAATTACTTTGTCCTTTTGCTGTTATACGGTTGCAAACTTTTTCAACAAATTGAAAATATGAATTCAAGTATGTGATAGTTTGGTTTTGACATGTATTGAGTGAGCGAATATTTGAGTGTAGAGATTTTAGAAGTATAAAGGTTAAAATAAAAACTGGATTACTTTTTGAAAGTTGAAATTAGAAGACATTTTGAAAGTACAAAGACTAAAATAAAACTTGTAGAATCCTCGTCACGGGTAGACAAGTTGAGTGATGCATTTTCTAGTTTCTACTAATGTACTCATTTATCTTGCCAAATACTAAATACTGGAAAATTCTATATGAGTCTTTCAATTGTGACTTCTTTTACATGTCAGAATTAACATTTATGCTAATCTTTTGTTTTATTTTTATTACAACAGTTAGTTCTTATTCAGATCAGGGAACTGGAGAAACATAAGAAGAAATGCGATTACGAACAAGTTTACTATGATCTGTGATGAGATGATGAATGCCACTGAAAGACTCCAGTGAACGATATCATAACTCTGGTAAGATTCAGAAATGGTTACTTTAACGGCATGGAGTTTGGCATTAGCGTTTTGCAGTTTCATTGGCTTTTTGTTTCTCACAGAAGAAAGAAAGTTGGCGAAATGGATAGAGAAAACGTTCTAATGAAATCGATAGGGAGAAATTGGGTTGCTTGGTATTGGCATATGGCTCAACTGAAATCTCGTAGTTCTGTTCATGTTCTTTATGGAATGTGTGAATAGTGATTGTGATCATTATTGGCCTTCTAACTCTCAATCTGTTCATGAACAATGTTGTATAAAAAGTGATTTTTTTTTTCTATTATATTACATGATAGTTATCAAATTACATTCTTATCTTAAATTGAAACCATAGTATATGTTTTAACATGTTTTTTTTT

mRNA sequence

ATGGAGACGGCGGAAACAGCCGGTGCAAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTTCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTATTTCTTGAACGATATGGATCACAGTTGACATCCAATGAACTGCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAACCCAACATCAGATGAATTACACACTAGGTCAGTTATTGTGAAAAATAGGAGACGGGCATATCTAAATAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTCTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGGTAGGTAATAATGTAAATCAAGGGGAAGAGGAAGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAGGAAGAGAAAGAGGAAGTGGGGGAGGACACGAAAGGTAATAATAAGCTTGCGAATGGAGCTGATTCCATGGAGATAACAAGGGCCATGGATGATCAGCATGAAATGCCAGCAACAGAGAATAGTGAAGCTGCTGAGGGTGGGTCTAATCATGTAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGATCAATTCACATATATCATGCATCAGAAATTTTTGTTGGGAGAAGACAACGAGCATTTAGATTACTCAAAAATAGACAATGATGAGACCTTGGACGATCACTGGATGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCGATGAAGATTAG

Coding sequence (CDS)

ATGGAGACGGCGGAAACAGCCGGTGCAAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTTCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTATTTCTTGAACGATATGGATCACAGTTGACATCCAATGAACTGCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAACCCAACATCAGATGAATTACACACTAGGTCAGTTATTGTGAAAAATAGGAGACGGGCATATCTAAATAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTCTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGGTAGGTAATAATGTAAATCAAGGGGAAGAGGAAGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAGGAAGAGAAAGAGGAAGTGGGGGAGGACACGAAAGGTAATAATAAGCTTGCGAATGGAGCTGATTCCATGGAGATAACAAGGGCCATGGATGATCAGCATGAAATGCCAGCAACAGAGAATAGTGAAGCTGCTGAGGGTGGGTCTAATCATGTAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGATCAATTCACATATATCATGCATCAGAAATTTTTGTTGGGAGAAGACAACGAGCATTTAGATTACTCAAAAATAGACAATGATGAGACCTTGGACGATCACTGGATGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCGATGAAGATTAG

Protein sequence

METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEEEEEEEEAEEEKEEVGEDTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED

Homology

[Close]

BLAST of CsaV3_3G002190 vs. NCBI nr
Match: XP_011650370.1 (PREDICTED: YTH domain-containing protein 1 [Cucumis sativus])

HSP 1 Score: 574.3 bits (1479), Expect = 2.7e-160
Identity = 337/352 (95.74%), Postives = 337/352 (95.74%), Query Frame = 0


Query: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
           METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60

Query: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
           FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN
Sbjct: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120

Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
           KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180

Query: 181 IRGEQRRLGVAERDLVG---------NNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IRGEQRRLGVAERDLVG              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IRGEQRRLGVAERDLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQ 300
           XXXXXX TKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQ
Sbjct: 241 XXXXXXDTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQ 300

Query: 301 MDQFTYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 344
           MDQFTYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Sbjct: 301 MDQFTYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 352

[Close]

BLAST of CsaV3_3G002190 vs. NCBI nr
Match: XP_008448764.1 (PREDICTED: coiled-coil domain-containing protein 97 [Cucumis melo])

HSP 1 Score: 548.1 bits (1411), Expect = 2.1e-152
Identity = 324/350 (92.57%), Postives = 328/350 (93.71%), Query Frame = 0


Query: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
           METAET  AKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1   METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60

Query: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
           FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIK+PTSDELHTRSVIVKNRRRAYL+
Sbjct: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120

Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
           KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180

Query: 181 IRGEQRRLGVAERDLVGNNV-------NQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IRGEQRRLGVAERDLVGNNV         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IRGEQRRLGVAERDLVGNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQMD 300
           XXXXX        NG DSME+TRAMDDQHE PATENSE AEGGSNHVATLSEADMQDQMD
Sbjct: 241 XXXXXXXXXXXXENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMD 300

Query: 301 QFTYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 344
           QFTYIMHQKFLLGED+EHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Sbjct: 301 QFTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 350

[Close]

BLAST of CsaV3_3G002190 vs. NCBI nr
Match: KGN55812.1 (hypothetical protein Csa_3G017060 [Cucumis sativus])

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 342/489 (69.94%), Postives = 342/489 (69.94%), Query Frame = 0


Query: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
           METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60

Query: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
           FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN
Sbjct: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120

Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
           KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180

Query: 181 IRGEQRRLGVAERDLVGNNVNQ-------------------------------------- 240
           IRGEQRRLGVAERDLVGNNVNQ                                      
Sbjct: 181 IRGEQRRLGVAERDLVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 ------------------------------------------------XXXXXXXXXXXX 344
                                                           XXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

[Close]

BLAST of CsaV3_3G002190 vs. NCBI nr
Match: XP_022155554.1 (coiled-coil domain-containing protein 97 [Momordica charantia])

HSP 1 Score: 509.2 bits (1310), Expect = 1.1e-140
Identity = 301/341 (88.27%), Postives = 311/341 (91.20%), Query Frame = 0


Query: 3   TAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFL 62
           T  TA AK LS EAMDCLSERLSLQEDLYFPRALQSTA+NPSQRKAILLDLLSRD AVFL
Sbjct: 4   TTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFL 63

Query: 63  ERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKL 122
           ERYGSQLTSNELHEFD LKDDYEINWHLKHLRSIK+PTSDELH+RSVIVKNRRRAYLNKL
Sbjct: 64  ERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKL 123

Query: 123 IYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR 182
           I DGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR
Sbjct: 124 ICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR 183

Query: 183 GEQRRLGVAERDLVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGN 242
           GEQRRLGVAERDL+GN+VN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          
Sbjct: 184 GEQRRLGVAERDLIGNDVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--------- 243

Query: 243 NKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQMDQFTYIMHQK 302
              AN A SMEI+ AMD Q+E  AT+NS+AAEGGSN  ATLSEADMQDQMDQFTYIMHQK
Sbjct: 244 ---ANAAHSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQK 303

Query: 303 FLLGEDNEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 344
           FLLGEDNEHLDYSKIDNDETLDDHW+REANDDAEEKYFDED
Sbjct: 304 FLLGEDNEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 332

[Close]

BLAST of CsaV3_3G002190 vs. NCBI nr
Match: XP_022935567.1 (coiled-coil domain-containing protein 97 [Cucurbita moschata])

HSP 1 Score: 503.4 bits (1295), Expect = 5.9e-139
Identity = 298/339 (87.91%), Postives = 315/339 (92.92%), Query Frame = 0


Query: 5   ETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLER 64
           E A AKGLSCEAMDCLSERLSLQ+ LYFPRALQSTA+NPSQRKAILLDLLSRDVAVFLER
Sbjct: 2   EAAAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLER 61

Query: 65  YGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKLIY 124
           YGSQLTSNELHEFD LKDDYEINWHLKHL SIK+PTSDELH+RSV+VKNRRRAYLNKLI 
Sbjct: 62  YGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLIC 121

Query: 125 DGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 184
           DGQYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE
Sbjct: 122 DGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 181

Query: 185 QRRLGVAERDLVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGNNK 244
           QRRLGVAERDLVGN++N  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    + 
Sbjct: 182 QRRLGVAERDLVGNDLNPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH- 241

Query: 245 LANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQMDQFTYIMHQKFL 304
                 SME++ AMD+Q E  AT+N++AAEGGSNH ATLSEADMQDQMDQFTYIMHQKFL
Sbjct: 242 ------SMEVSTAMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFL 301

Query: 305 LGEDNEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 344
           LGEDNEHLDYSKIDNDETLDDHW+REANDDAEEKYFDED
Sbjct: 302 LGEDNEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 333

[Close]

BLAST of CsaV3_3G002190 vs. TAIR10
Match: AT5G47090.1 (unknown protein)

HSP 1 Score: 301.2 bits (770), Expect = 8.1e-82
Identity = 171/328 (52.13%), Postives = 205/328 (62.50%), Query Frame = 0


Query: 16  AMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLERYGSQLTSNELH 75
           A + ++ERLS  ++LYFPRA+Q TA++  QRK+ILLDLL RD AVFLERYGS+L  +EL 
Sbjct: 19  AAEDITERLSSLDNLYFPRAVQLTAASSDQRKSILLDLLRRDPAVFLERYGSELLVDELL 78

Query: 76  EFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKLIYDGQYFSEDAMR 135
           EFDA+K DYE++WHLK+LR   +PTS+E+ +RSV V+NRR AYLNKL+ +GQYFSEDAMR
Sbjct: 79  EFDAMKHDYEVDWHLKNLRKKISPTSEEIKSRSVAVRNRRLAYLNKLVSEGQYFSEDAMR 138

Query: 136 EREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQRRLGVAERDL 195
           +REP+LHHEYVGKFQD  GR MARPGERWSETLMRR+EEA+LV +IR EQ+RLGV+E D 
Sbjct: 139 DREPYLHHEYVGKFQDVMGRNMARPGERWSETLMRRAEEAVLVTRIREEQQRLGVSESDW 198

Query: 196 VGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGNNKLANGADSMEIT 255
           VGN                                       X                 
Sbjct: 199 VGNE------------------------------------KMXXXXXXXXXXXXXXXXXX 258

Query: 256 RAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLDYS 315
                                            QD MDQFT IM QKFL GED++HLDY+
Sbjct: 259 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDMMDQFTSIMEQKFLSGEDHQHLDYA 310

Query: 316 KIDNDETLDDHWMREANDDAEEKYFDED 344
           KIDNDETLDDHW+RE   DAE+KYFDED
Sbjct: 319 KIDNDETLDDHWLREIGRDAEDKYFDED 310

[Close]

BLAST of CsaV3_3G002190 vs. Swiss-Prot
Match: sp|Q9DBT3|CCD97_MOUSE (Coiled-coil domain-containing protein 97 OS=Mus musculus OX=10090 GN=Ccdc97 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.7e-08
Identity = 35/105 (33.33%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 45  QRKAILLDLLSRDVAVFLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDEL 104
           ++ AIL  L  +   VFLER+ + L    L  F  L+ D+  +++   +          L
Sbjct: 91  EKVAILGQLYHKKPLVFLERFRTGLREEHLACFGHLRGDHRADFYCAEVARQGTARPRTL 150

Query: 105 HTRSVIVKNRRRAYLNKLIYDGQYFSEDAMREREPFLHHEYVGKF 150
            TR   ++NRR A L +LI  G+YFS++ MR R P L+ +Y+G++
Sbjct: 151 RTR---LRNRRYAALRELIQGGEYFSDEQMRFRAPLLYEQYIGQY 192

[Close]

BLAST of CsaV3_3G002190 vs. Swiss-Prot
Match: sp|Q96F63|CCD97_HUMAN (Coiled-coil domain-containing protein 97 OS=Homo sapiens OX=9606 GN=CCDC97 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-07
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 45  QRKAILLDLLSRDVAVFLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDEL 104
           ++ AIL  L      VFLER+ + L    L  F  ++ D+  +++   +          L
Sbjct: 91  EKVAILAQLYHEKPLVFLERFRTGLREEHLACFGHVRGDHRADFYCAEVARQGTARPRTL 150

Query: 105 HTRSVIVKNRRRAYLNKLIYDGQYFSEDAMREREPFLHHEYVGKF 150
            TR   ++NRR A L +LI  G+YFS++ MR R P L+ +Y+G++
Sbjct: 151 RTR---LRNRRYAALRELIQGGEYFSDEQMRFRAPLLYEQYIGQY 192

[Close]

BLAST of CsaV3_3G002190 vs. TrEMBL
Match: tr|A0A1S3BKG3|A0A1S3BKG3_CUCME (coiled-coil domain-containing protein 97 OS=Cucumis melo OX=3656 GN=LOC103490832 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 1.4e-152
Identity = 324/350 (92.57%), Postives = 328/350 (93.71%), Query Frame = 0


Query: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
           METAET  AKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1   METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60

Query: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
           FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIK+PTSDELHTRSVIVKNRRRAYL+
Sbjct: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120

Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
           KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180

Query: 181 IRGEQRRLGVAERDLVGNNV-------NQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IRGEQRRLGVAERDLVGNNV         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IRGEQRRLGVAERDLVGNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQMD 300
           XXXXX        NG DSME+TRAMDDQHE PATENSE AEGGSNHVATLSEADMQDQMD
Sbjct: 241 XXXXXXXXXXXXENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMD 300

Query: 301 QFTYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 344
           QFTYIMHQKFLLGED+EHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Sbjct: 301 QFTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 350

[Close]

BLAST of CsaV3_3G002190 vs. TrEMBL
Match: tr|A0A0A0L5C7|A0A0A0L5C7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017060 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.3e-147
Identity = 342/489 (69.94%), Postives = 342/489 (69.94%), Query Frame = 0


Query: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
           METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60

Query: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
           FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN
Sbjct: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120

Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
           KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180

Query: 181 IRGEQRRLGVAERDLVGNNVNQ-------------------------------------- 240
           IRGEQRRLGVAERDLVGNNVNQ                                      
Sbjct: 181 IRGEQRRLGVAERDLVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 ------------------------------------------------XXXXXXXXXXXX 344
                                                           XXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

[Close]

BLAST of CsaV3_3G002190 vs. TrEMBL
Match: tr|F6HTF2|F6HTF2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00030 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 9.7e-106
Identity = 244/329 (74.16%), Postives = 284/329 (86.32%), Query Frame = 0


Query: 15  EAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLERYGSQLTSNEL 74
           EAM+ ++ERLS +++LYFPRAL++TA+ PSQRK+ILLDLLSRD AVFLERYGSQLTS+EL
Sbjct: 16  EAMEKMTERLSCKDNLYFPRALEATATTPSQRKSILLDLLSRDPAVFLERYGSQLTSDEL 75

Query: 75  HEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKLIYDGQYFSEDAM 134
            EFD+LKDDYE++WHLKH+RS+ +PTS+EL +RSV VKNRRRAYLNKLIYDGQYFSEDAM
Sbjct: 76  REFDSLKDDYEVSWHLKHIRSVMSPTSEELKSRSVAVKNRRRAYLNKLIYDGQYFSEDAM 135

Query: 135 REREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQRRLGVAERD 194
           REREP+LHHEYVG+FQDPSGR MARPGERWSETL+RRSEEAMLVAKIRGEQ+RLGVAERD
Sbjct: 136 REREPYLHHEYVGRFQDPSGRSMARPGERWSETLLRRSEEAMLVAKIRGEQQRLGVAERD 195

Query: 195 LVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGNNKLANGADSMEI 254
            VGN  + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          +   + 
Sbjct: 196 WVGNERSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVSDS 255

Query: 255 TRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQMDQFTYIMHQKFLLGEDNEHLDY 314
           +R + D H+ P    S++++  SN  ATLS  +MQDQMDQFT+IMHQKFL GED ++LDY
Sbjct: 256 SRVVMD-HDGP-VNGSQSSDMESNQKATLSAVEMQDQMDQFTHIMHQKFLSGEDRDYLDY 315

Query: 315 SKIDNDETLDDHWMREANDDAEEKYFDED 344
           SKID+DETLDDHW+REAN DAE+KYF ED
Sbjct: 316 SKIDDDETLDDHWLREANYDAEDKYFAED 342

[Close]

BLAST of CsaV3_3G002190 vs. TrEMBL
Match: tr|A0A218XUN9|A0A218XUN9_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr003731 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.1e-100
Identity = 244/347 (70.32%), Postives = 274/347 (78.96%), Query Frame = 0


Query: 2   ETAETAGAKG----LSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRD 61
           E AET+G  G    L+ E  + ++ERLS  E+LYFPRAL S+AS+PSQRK+I LDLLSRD
Sbjct: 3   EAAETSGGAGGRRELTSETKENIAERLSSLENLYFPRALHSSASDPSQRKSIFLDLLSRD 62

Query: 62  VAVFLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRA 121
           VAVFLERYGSQLT+ EL EFD LKDDYEINWHL HLRSIK+PTS EL +RS+ VKNRRRA
Sbjct: 63  VAVFLERYGSQLTNGELQEFDGLKDDYEINWHLNHLRSIKSPTSAELRSRSITVKNRRRA 122

Query: 122 YLNKLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAML 181
           YLNKL++DGQYFSEDAMREREP+LHHEYVGKFQDPS R MARPGE+WSETL+RRSEEA L
Sbjct: 123 YLNKLMHDGQYFSEDAMREREPYLHHEYVGKFQDPSSRSMARPGEKWSETLIRRSEEAFL 182

Query: 182 VAKIRGEQRRLGVAERDLVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
           V++IR EQ+RLGVAERD VGN       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 183 VSEIRREQQRLGVAERDWVGNE-----RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242

Query: 242 XTKGNNKL-ANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQMDQFT 301
           X  G   +  NG+  +E T              S   EG S     LS+ +MQDQMDQF 
Sbjct: 243 XXXGEQAMKMNGSSHVEST--------------SRGNEGPS---TALSDLEMQDQMDQFV 302

Query: 302 YIMHQKFLLGEDNEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 344
           YIM QKFL GED+EHLDYSKID+DETLDDHW+REA+ DAEEKYF ED
Sbjct: 303 YIMQQKFLTGEDHEHLDYSKIDDDETLDDHWLREASHDAEEKYFAED 327

[Close]

BLAST of CsaV3_3G002190 vs. TrEMBL
Match: tr|M5WUT8|M5WUT8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G053300 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.6e-100
Identity = 231/334 (69.16%), Postives = 256/334 (76.65%), Query Frame = 0


Query: 10  KGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLERYGSQL 69
           K +  EAM+ +SERLS  E LYFPRAL S   NPSQRKAILLDLLSRDV VFLERYGS+L
Sbjct: 4   KAVRSEAMESISERLSSMEGLYFPRALHSNTVNPSQRKAILLDLLSRDVTVFLERYGSKL 63

Query: 70  TSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKLIYDGQYF 129
           T +EL EFD LKDDYEINWH+ HLRS+ +PTSDEL +RSV VKNRRRAYLNKLI+DG YF
Sbjct: 64  TFDELQEFDVLKDDYEINWHVNHLRSLMSPTSDELKSRSVTVKNRRRAYLNKLIFDGHYF 123

Query: 130 SEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQRRLG 189
           SEDAMREREP+LHHEYVGKFQDP GR MARPGERWS+TL+RR+EEA+LVAKIRGEQ+RLG
Sbjct: 124 SEDAMREREPYLHHEYVGKFQDPIGRSMARPGERWSDTLLRRAEEAILVAKIRGEQQRLG 183

Query: 190 VAERDLVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGNNKLANGA 249
           V+E D VG   N XXXXXXXXXXXXXXXXXXXXXXXXXX             +    NGA
Sbjct: 184 VSESDWVGGERNXXXXXXXXXXXXXXXXXXXXXXXXXXXANRGAQSAEVLMDHPDAPNGA 243

Query: 250 DSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQMDQFTYIMHQKFLLGEDN 309
                         +      E +E      AT+S  ++QDQMDQFT+IM QKFLLGEDN
Sbjct: 244 XXXXXXXXXXXXXXI----TDECSE-----QATVSAEELQDQMDQFTHIMQQKFLLGEDN 303

Query: 310 EHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 344
           E+LDYSKIDNDETLDDHW REAN DAEEKYF ED
Sbjct: 304 EYLDYSKIDNDETLDDHWQREANHDAEEKYFAED 328

The following BLAST results are available for this feature:

BLAST of CsaV3_3G002190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650370.1	2.7e-160	95.74	PREDICTED: YTH domain-containing protein 1 [Cucumis sativus]	[more]
XP_008448764.1	2.1e-152	92.57	PREDICTED: coiled-coil domain-containing protein 97 [Cucumis melo]	[more]
KGN55812.1	2.0e-147	69.94	hypothetical protein Csa_3G017060 [Cucumis sativus]	[more]
XP_022155554.1	1.1e-140	88.27	coiled-coil domain-containing protein 97 [Momordica charantia]	[more]
XP_022935567.1	5.9e-139	87.91	coiled-coil domain-containing protein 97 [Cucurbita moschata]	[more]

BLAST of CsaV3_3G002190 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47090.1	8.1e-82	52.13	unknown protein	[more]

BLAST of CsaV3_3G002190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9DBT3\|CCD97_MOUSE	9.7e-08	33.33	Coiled-coil domain-containing protein 97 OS=Mus musculus OX=10090 GN=Ccdc97 PE=1...	[more]
sp\|Q96F63\|CCD97_HUMAN	1.6e-07	32.38	Coiled-coil domain-containing protein 97 OS=Homo sapiens OX=9606 GN=CCDC97 PE=1 ...	[more]

BLAST of CsaV3_3G002190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BKG3\|A0A1S3BKG3_CUCME	1.4e-152	92.57	coiled-coil domain-containing protein 97 OS=Cucumis melo OX=3656 GN=LOC103490832...	[more]
tr\|A0A0A0L5C7\|A0A0A0L5C7_CUCSA	1.3e-147	69.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017060 PE=4 SV=1	[more]
tr\|F6HTF2\|F6HTF2_VITVI	9.7e-106	74.16	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00030 PE=4 SV=...	[more]
tr\|A0A218XUN9\|A0A218XUN9_PUNGR	2.1e-100	70.32	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr003731 PE=4 SV=1	[more]
tr\|M5WUT8\|M5WUT8_PRUPE	3.6e-100	69.16	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G053300 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018613	DUF2052_coiled-coil

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005686	U2 snRNP
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G002190.1	CsaV3_3G002190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 198..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..286
IPR018613	Protein of unknown function DUF2052, coiled-coil	PFAM	PF09747	DUF2052	coord: 113..343 e-value: 1.0E-51 score: 175.8
IPR018613	Protein of unknown function DUF2052, coiled-coil	PANTHER	PTHR31840	FAMILY NOT NAMED	coord: 15..343

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G002190	CSPI03G02160	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G002190	Cucsa.321420	Cucumber (Gy14) v1	cgycucB499
CsaV3_3G002190	CmaCh16G010990	Cucurbita maxima (Rimu)	cmacucB0372
CsaV3_3G002190	CmaCh06G008250	Cucurbita maxima (Rimu)	cmacucB0975
CsaV3_3G002190	CmoCh06G008470	Cucurbita moschata (Rifu)	cmocucB0961
CsaV3_3G002190	CmoCh16G011480	Cucurbita moschata (Rifu)	cmocucB0371
CsaV3_3G002190	Cp4.1LG08g06960	Cucurbita pepo (Zucchini)	cpecucB1063
CsaV3_3G002190	CsGy3G002060	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G002190	Carg12057	Silver-seed gourd	carcucB0599
CsaV3_3G002190	Carg23244	Silver-seed gourd	carcucB0745
CsaV3_3G002190	Cla008762	Watermelon (97103) v1	cucwmB209
CsaV3_3G002190	MELO3C013891	Melon (DHL92) v3.5.1	cucmeB246
CsaV3_3G002190	ClCG10G002100	Watermelon (Charleston Gray)	cucwcgB194
CsaV3_3G002190	Lsi07G012450	Bottle gourd (USVL1VR-Ls)	cuclsiB250
CsaV3_3G002190	MELO3C013891.2	Melon (DHL92) v3.6.1	cucmedB231
CsaV3_3G002190	Cla97C10G186720	Watermelon (97103) v2	cucwmbB182
CsaV3_3G002190	Bhi11G000084	Wax gourd	cucwgoB242

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G002190	Cucumber (Chinese Long) v3	cuccucB109
CsaV3_3G002190	Cucumber (Chinese Long) v3	cuccucB113
CsaV3_3G002190	Silver-seed gourd	carcucB0821
CsaV3_3G002190	Cucumber (Gy14) v2	cgybcucB119
CsaV3_3G002190	Cucumber (Gy14) v1	cgycucB488
CsaV3_3G002190	Cucurbita maxima (Rimu)	cmacucB0297
CsaV3_3G002190	Cucurbita maxima (Rimu)	cmacucB0620
CsaV3_3G002190	Cucurbita maxima (Rimu)	cmacucB0718
CsaV3_3G002190	Cucurbita moschata (Rifu)	cmocucB0288
CsaV3_3G002190	Cucurbita moschata (Rifu)	cmocucB0705
CsaV3_3G002190	Cucurbita pepo (Zucchini)	cpecucB0246
CsaV3_3G002190	Cucurbita pepo (Zucchini)	cpecucB0764
CsaV3_3G002190	Cucurbita pepo (Zucchini)	cpecucB0895
CsaV3_3G002190	Cucurbita pepo (Zucchini)	cpecucB1047
CsaV3_3G002190	Wild cucumber (PI 183967)	cpicucB147
CsaV3_3G002190	Wild cucumber (PI 183967)	cpicucB151
CsaV3_3G002190	Bottle gourd (USVL1VR-Ls)	cuclsiB237
CsaV3_3G002190	Bottle gourd (USVL1VR-Ls)	cuclsiB244
CsaV3_3G002190	Melon (DHL92) v3.5.1	cucmeB222
CsaV3_3G002190	Melon (DHL92) v3.5.1	cucmeB244
CsaV3_3G002190	Melon (DHL92) v3.6.1	cucmedB215
CsaV3_3G002190	Melon (DHL92) v3.6.1	cucmedB243
CsaV3_3G002190	Watermelon (Charleston Gray)	cucwcgB184
CsaV3_3G002190	Watermelon (Charleston Gray)	cucwcgB232
CsaV3_3G002190	Watermelon (97103) v1	cucwmB193
CsaV3_3G002190	Watermelon (97103) v1	cucwmB249
CsaV3_3G002190	Watermelon (97103) v2	cucwmbB255