CSPI03G02160 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTATTATCGCTTGAATTAAAGGTGGAATGTAACTTCAATCCGTGCATGGGTACAGTAATCGACTTGCCAAACACGCTCAGAACAAAAAATATTTTCATGGGACTCTATCTTCACGTGCTGCTCACGTGTTTAATCCTTTTGCTCGTCACCGACTGAGCCGGCCGAGGGTTTATTATTCACCGGGGAAGAGCGCGGCGGCGAGAGAACAAACATGGAGACGGCGGAAACAGCCGGTGCGAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTTCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTATTTCTTGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATAATTCTGTATTTTTTTTTGCAATTTCTGGCATGGATTTCTGTTGTATGTTGATTATTTCATCTGAAGTTATAAGATCCCTAGCTTACTTTATCGAATTGGAACAAAATAAAGGGAGATTTTGAAGGAGTAGATTTATGCTTGTTTTATATGGTAGAGTGTCAGAATTCTGAGTCGCATGGTTCCATTTAGCTCATAGTGTAATGGATGAAAAAATGACACTAGTTACATCAGAAGATTGAACTCCATTTGTTTTTTGAAAATTAAGTTATAAACTTACTTCCACTTTTTCTTTGTTTTGCTAAGAATTCAATTTTTGGTTGAGGAAGGATGAAAACAAAGGTAAGAAAATGCTGAGGAAACAAACAAGTAGAATTTTTTAGTATTGAATGTTTATCAAAGGAGACTCTGTAGAATGAAGCAGTGAATACCAAATTATAAAATAATAGTGGTTTTAATTTCTTTTCATGTGTTTGGGTGTTTTACAGTCGAGAGGAAGGAATAAATTTTGATGCATTAGTTCTTTTGTTATTTATGAAGCAATTTTCTTGTAGGTTTTTTGAATCATTTTTAAGCTTTGAAAACGAAAGAGTTCAGCATCTCCTTCATTTCCACACTTTTTGCTACTGGAAATGAGGGGGGAAAATAACTTTGGCTTTATTTGAATTATGGGAAACAAATGTCTTGAATTCATAACATATAGAAACTGATTTGGTAATTAGTTTGATTTTAATCCTTGAATGCTGCTTCTTTCTGTTCATTTTAAATATTCTAATGTTTGTTGCACCTCTAACTTCAATTGATGTAGAACGATATGGATCACAGTTGACATCCAATGAACTGCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAACCCAACATCAGATGAATTACACACTAGGTCAGTTATTGTGAAAAATAGGAGACGGGCATATCTAAATAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTTTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCCGAGAGGGACTTGGTAGGTAATAATGTAAATCAAGGGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAGAAAGAGGAAGTGGGGGAGGACACGAAAGGTAATAATAAGCTTGCGAATGGAGCTGATTCCATGGAGGTAATTTTGTGTTATCTCTTTTGTCTCATCCTTTGATTTCCTTTACAAATAACTTTTTTTTTATTAGTTTGATTATTCTGGTTGGCTTGCTTAACTGGTTTTTAGATCAGTCTTATGATTTATTCTGCCTTGTTCATTATTCTTCTCCTTTTGCAATCCGAAGTCCTGCCTATTTAACCAATACCAGGCTTTTAATGCTTATAATTTTTTTTTTGGATATTAATGTTTTATACATCTGATCATTGTGGATTGAACGAAATAACATATCTGAATGCATTATGCTTTGTGGAGATCACTTGTCCTCGATAATGAGTTGTTTGACATTTGATGCTTTCGCTTGTAGATAACAAGGGCCATGGATGATCAGCATGAAATGCCAGCAACAGAGAATAGTGAAGCTGCTGAGGGTGGGTCTAATCATGTAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGATCAATTCACATATATCATGCATCAGAAATTTTTGTTGGGAGAAGACAACGAGCATTTAGATTACTCAAAAATAGACAATGATGAGACCTTGGACGATCACTGGATGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCGATGAAGATTAGAGCGAATGAAAGGTGCAGTTCCTTTCATCTAATTGTAAAAAATTTATGTTAAATTGGTACCTGTATATCAGATGCTTTCTGGCCTTTTATATTTTATAACCTCTCAAACTTTCTAGTGTTTAAGCATGGAAATACATAGATAGTGACAAGTCTTTCTTCTTTAATCTGAGAGTAGAATTTGAATTCCTGTTAGACTGCTTTTAGAATGATGCTCAATTTAACTATTAGATGCCAAAGGACGGGTGTAAGTTCAAATAGGAGCACTCCTTATTTTGTCTTTAATCTTTCAAAAGACCTGTTTTTGTATTTGAATTTAGGGATCCTTTCCGTTTTCGTCAAAAAATGTTTAGGGTAGTACCTATTCAAAAACTAATTACTTTGTCCTTTTGCTGTTATACGGTTGCAAACTTTTTCAACAAATTGAAAATGTGAATTCAAGTATGTGATAGTTTGGTTTTGACATGTATTGAGTGAGCGAATATTTGAGTGTAGAGATTTTAGAAGTATAAAGGTTAAAATAAAAACTGGATTACTTTTTGAAAGTTGAAATTAGAAGACATTTTGAAAGTACAAAGACTAAAATAAAACTTGTAGAATCCTTGTCATGGGTAGACAAGTTGAGTGATGCATTTTCTAGTTTCTACTAATGTACTCATTTATCTTGCCAAATACTAAGTACTGGAAAATTCTAGATGAGTCTTTCAATTGTGACTTCTTTTACATGTCAGAATTAACATTTATGCTAATCTTTTGTTTTATTTTTATTACAACAGTTAGTTCTTATTCAGATCAGGGAACTGGAGAAACATAAGAAGAAATGCGATTACGAACACGTTTACTATGATCTGTGATGAGATGATGAATGCCACTGAAAGACTCCAGTGAACGATATCATAACTCTGGTAAGATTTAGAAATGGTTACTTTAACGGCATGGAGTTTGGCATTAGCGTTTTGCAGTTTCATTGGCTTTTTGTTTCTCACAGAAGAAAGAATGTTGGCGAAATGGATAGAGAAAACGTTCTAATGAAATCGATAGGGAGAAATTGGGTTGCTTGGTATTGGCATATGGCTCAACTGAAATCTCGTAGTTCTGTTCATGTTCTTTATGGAATGTGTGAATAGTGATTGTGATCATTATTGGCCTTCTAACTCTCAATC ATGGAGACGGCGGAAACAGCCGGTGCGAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTTCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTATTTCTTGAACGATATGGATCACAGTTGACATCCAATGAACTGCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAACCCAACATCAGATGAATTACACACTAGGTCAGTTATTGTGAAAAATAGGAGACGGGCATATCTAAATAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTTTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCCGAGAGGGACTTGGTAGGTAATAATGTAAATCAAGGGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAGAAAGAGGAAGTGGGGGAGGACACGAAAGGTAATAATAAGCTTGCGAATGGAGCTGATTCCATGGAGATAACAAGGGCCATGGATGATCAGCATGAAATGCCAGCAACAGAGAATAGTGAAGCTGCTGAGGGTGGGTCTAATCATGTAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGATCAATTCACATATATCATGCATCAGAAATTTTTGTTGGGAGAAGACAACGAGCATTTAGATTACTCAAAAATAGACAATGATGAGACCTTGGACGATCACTGGATGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCGATGAAGATTAG ATGGAGACGGCGGAAACAGCCGGTGCGAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTTCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTATTTCTTGAACGATATGGATCACAGTTGACATCCAATGAACTGCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAACCCAACATCAGATGAATTACACACTAGGTCAGTTATTGTGAAAAATAGGAGACGGGCATATCTAAATAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTTTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCCGAGAGGGACTTGGTAGGTAATAATGTAAATCAAGGGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAGAAAGAGGAAGTGGGGGAGGACACGAAAGGTAATAATAAGCTTGCGAATGGAGCTGATTCCATGGAGATAACAAGGGCCATGGATGATCAGCATGAAATGCCAGCAACAGAGAATAGTGAAGCTGCTGAGGGTGGGTCTAATCATGTAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGATCAATTCACATATATCATGCATCAGAAATTTTTGTTGGGAGAAGACAACGAGCATTTAGATTACTCAAAAATAGACAATGATGAGACCTTGGACGATCACTGGATGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCGATGAAGATTAG
BLAST of CSPI03G02160 vs. TrEMBL
Match: A0A0A0L5C7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017060 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 9.9e-109 Identity = 295/385 (76.62%), Postives = 320/385 (83.12%), Query Frame = 1
BLAST of CSPI03G02160 vs. TrEMBL
Match: F6HTF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g00030 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 3.3e-96 Identity = 246/377 (65.25%), Postives = 292/377 (77.45%), Query Frame = 1
BLAST of CSPI03G02160 vs. TrEMBL
Match: A0A059C0F8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00334 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 6.5e-84 Identity = 234/378 (61.90%), Postives = 268/378 (70.90%), Query Frame = 1
BLAST of CSPI03G02160 vs. TrEMBL
Match: V4TNX1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021261mg PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.7e-71 Identity = 153/209 (73.21%), Postives = 184/209 (88.04%), Query Frame = 1
BLAST of CSPI03G02160 vs. TrEMBL
Match: A0A0D2PEP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G191100 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 7.2e-67 Identity = 131/172 (76.16%), Postives = 148/172 (86.05%), Query Frame = 1
BLAST of CSPI03G02160 vs. TAIR10
Match: AT5G47090.1 (AT5G47090.1 unknown protein) HSP 1 Score: 144.1 bits (362), Expect = 1.9e-34 Identity = 158/295 (53.56%), Postives = 209/295 (70.85%), Query Frame = 1
BLAST of CSPI03G02160 vs. NCBI nr
Match: gi|659095779|ref|XP_008448764.1| (PREDICTED: myb-like protein X [Cucumis melo]) HSP 1 Score: 552.0 bits (1421), Expect = 8.5e-154 Identity = 333/391 (85.17%), Postives = 343/391 (87.72%), Query Frame = 1
BLAST of CSPI03G02160 vs. NCBI nr
Match: gi|700200679|gb|KGN55812.1| (hypothetical protein Csa_3G017060 [Cucumis sativus]) HSP 1 Score: 401.7 bits (1031), Expect = 1.4e-108 Identity = 295/385 (76.62%), Postives = 320/385 (83.12%), Query Frame = 1
BLAST of CSPI03G02160 vs. NCBI nr
Match: gi|778675212|ref|XP_011650370.1| (PREDICTED: YTH domain-containing protein 1 [Cucumis sativus]) HSP 1 Score: 354.0 bits (907), Expect = 3.4e-94 Identity = 278/391 (71.10%), Postives = 294/391 (75.19%), Query Frame = 1
BLAST of CSPI03G02160 vs. NCBI nr
Match: gi|702335617|ref|XP_010055399.1| (PREDICTED: coiled-coil domain-containing protein 97 [Eucalyptus grandis]) HSP 1 Score: 320.1 bits (819), Expect = 5.4e-84 Identity = 235/385 (61.04%), Postives = 271/385 (70.39%), Query Frame = 1
BLAST of CSPI03G02160 vs. NCBI nr
Match: gi|629106711|gb|KCW71857.1| (hypothetical protein EUGRSUZ_E00334 [Eucalyptus grandis]) HSP 1 Score: 319.3 bits (817), Expect = 9.3e-84 Identity = 234/378 (61.90%), Postives = 268/378 (70.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |