CsGy3G002060 (gene) Cucumber (Gy14) v2

NameCsGy3G002060
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptioncoiled-coil domain-containing protein 97
LocationChr3 : 1614402 .. 1618054 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGAATTAAAGGTGGAATGTAACTTCAATCGGTGCATGGGTACAGTAATCGACTTGCCAAACACGCTCACAACAAAAAATATTTTCATGGGACTCTATCTTCACGTGCTGCTCACGTGTTTAATCCTTTTGCTCGTCACCGACTGAGCCGGCCGAGGGTTTATTATTCACCGGGGAAGAGCGCGGCGGCGAGAGAACAAACATGGAGACGGCGGAAACAGCCGGTGCAAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTTCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTATTTCTTGGTTCTCTCTCTCTCTCTCTCTATAATTCTGTATTTTTTTTTGCAATTTCTGGCATGGATTTCTGTTGTATGTTGATTATTTCATCTGAAGTTATAAGATCCCTAGCTTACTTTATCGAATTGGAACAAAATAAAGGGAGATTTTGAAGGAGTAGATTTATGCTTGTTTTATATGGTAGAGTGTCAGAATTCTGAGTCGCATGGTTCCATTTAGCTCATAGTGTAATGGATGAAAAAATGACACTAGTTACATTAGAAGATTGAACTCCATTTGTTTTTTGAAAATTAAGTTATAAACTTACTTCCACTTTTTCTTTGTTTTGCTAAGAATTCAATTTTTGGTTGAGGAAGGATGAAAACAAAGGTAAGAAAATGCTGAGGAAACAAACAAGTAGAATTTTTTAGTATTGAATGTTTATCAAAGGAGACTCTGTAGAATGAAGCAGTGAATACCAAATTATAAAATAATAGTGGTTTTAATTTCTTTTCATGTGTTTGGGTGTTTTACAGTCGAGAGGAAGGAATAAATTTTGATGCATTAGTTCTTTTGTTATTTATGAAGCAATTTTCTTGTAGGTTTTTTGAATCATTTTTAAGCTTTGAAAACGAAAGAGTTCAGCATCTCCTTCATTTGCACACTTTTTGCTACTGGAAATGAGGGGGGAAAATAACTTTGGCTTTATTTGAATTATGGGAAACAAATGTCTTGAATTCATAACATATAGAAACTGATTTGGTAATTAGTTTGATTTTAATCCTTGAATGCTGCTTCTTTCTGTTCATTTTAAATATTCTAATGTTTGTTGCACCTCTAACTTCAATTGATGTAGAACGATATGGATCACAGTTGACATCCAATGAACTGCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAACCCAACATCAGATGAATTACACACTAGGTCAGTTATTGTGAAAAATAGGAGACGGGCATATCTAAATAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTCTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGGTAGGTAATAATGTAAATCAAGGGGAAGAGGAAGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAGGAAGAGAAAGAGGAAGTGGGGGAGGACACGAAAGGTAATAATAAGCTTGCGAATGGAGCTGATTCCATGGAGGTAATTTTGTGTTATCTCTTTTGTCTCATCCTTTGATTTCCTTTACAAATAACTTTTTTTTTATTAGTTTGATTATTCTGGTTGGCTTGCTTAACTGGTTTTTAGATCAGTCTTATGATTTATTCTGCCTTGTTCATTATTCTTCTCCTTTTGCAATCTGAAGTCCTGCCTATTTAACCAATACCAGGCTTTTAATGCTTATAATTTTTTTTTGGATATTAATGTTTTATACATCTGATCATTGTGGATTGAACGAAATAACATATCTGAATGCATTATGCTTTGTGGAGATCACTTGTCCTCGATAATGAGTTGTTTGACATTTGATGCTTTCGCTTGTAGATAACAAGGGCCATGGATGATCAGCATGAAATGCCAGCAACAGAGAATAGTGAAGCTGCTGAGGGTGGGTCTAATCATGTAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGATCAATTCACATATATCATGCATCAGAAATTTTTGTTGGGAGAAGACAACGAGCATTTAGATTACTCAAAAATAGACAATGATGAGACCTTGGACGATCACTGGATGAGGGAAGCCAATGATGATGCCGAGGAGAAATACTTCGATGAAGATTAGAGCGAACGAAAGGTGCAGTTCCTTTCATCTAATTGTAAAAAATTTATGTTAAATTGGTACCTGTATATCAGATGCTTTCTGGCCTTTTATATTTTATAACCTCTCAAACTTTCTAGTGTTTAAGCATGGAAATACATAGATAGTGACAAGTCTTTCTTCTTTAATCTGAGAGTAGAATTTGAATTCCTGTTAGACTGCTTTTAGAATGTGCTCAATTTAACTATTAGATGCCAAAGGACGGGTGTAAGTTCAAATAGGAGCACTCCTTATTTTGTCTTTAATCTTTCAAAAGACCTGTTTTTGTATTTGAATTTAGGGATCCTTTCCGTTTTCGTCAAAAAATGTTTAGGGTAGTACCTATTCAAAAACTAATTACTTTGTCCTTTTGCTGTTATACGGTTGCAAACTTTTTCAACAAATTGAAAATATGAATTCAAGTATGTGATAGTTTGGTTTTGACATGTATTGAGTGAGCGAATATTTGAGTGTAGAGATTTTAGAAGTATAAAGGTTAAAATAAAAACTGGATTACTTTTTGAAAGTTGAAATTAGAAGACATTTTGAAAGTACAAAGACTAAAATAAAACTTGTAGAATCCTCGTCACGGGTAGACAAGTTGAGTGATGCATTTTCTAGTTTCTACTAATGTACTCATTTATCTTGCCAAATACTAAATACTGGAAAATTCTATATGAGTCTTTCAATTGTGACTTCTTTTACATGTCAGAATTAACATTTATGCTAATCTTTTGTTTTATTTTTATTACAACAGTTAGTTCTTATTCAGATCAGGGAACTGGAGAAACATAAGAAGAAATGCGATTACGAACAAGTTTACTATGATCTGTGATGAGATGATGAATGCCACTGAAAGACTCCAGTGAACGATATCATAACTCTGGTAAGATTCAGAAATGGTTACTTTAACGGCATGGAGTTTGGCATTAGCGTTTTGCAGTTTCATTGGCTTTTTGTTTCTCACAGAAGAAAGAAAGTTGGCGAAATGGATAGAGAAAACGTTCTAATGAAATCGATAGGGAGAAATTGGGTTGCTTGGTATTGGCATATGGCTCAACTGAAATCTCGTAGTTCTGTTCATGTTCTTTATGGAATGTGTGAATAGTGATTGTGATCATTATTGGCCTTCTAACTCTCAATCTGTTCATGAACAATGTTGTATAAAAAGTGATTTTTTTTTTCTATTATATTACATGATAGTTATCAAATTACATTCTTATCTTAAATTGA

mRNA sequence

CTTGAATTAAAGGTGGAATGTAACTTCAATCGGTGCATGGGTACAGTAATCGACTTGCCAAACACGCTCACAACAAAAAATATTTTCATGGGACTCTATCTTCACGTGCTGCTCACGTGTTTAATCCTTTTGCTCGTCACCGACTGAGCCGGCCGAGGGTTTATTATTCACCGGGGAAGAGCGCGGCGGCGAGAGAACAAACATGGAGACGGCGGAAACAGCCGGTGCAAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTTCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTATTTCTTGAACGATATGGATCACAGTTGACATCCAATGAACTGCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAACCCAACATCAGATGAATTACACACTAGGTCAGTTATTGTGAAAAATAGGAGACGGGCATATCTAAATAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTCTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGGTAGGTAATAATGTAAATCAAGGGGAAGAGGAAGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAGGAAGAGAAAGAGGAAGTGGGGGAGGACACGAAAGGTAATAATAAGCTTGCGAATGGAGCTGATTCCATGGAGATAACAAGGGCCATGGATGATCAGCATGAAATGCCAGCAACAGAGAATAGTGAAGCTGCTGAGGGTGGGTCTAATCATTTAGTTCTTATTCAGATCAGGGAACTGGAGAAACATAAGAAGAAATGCGATTACGAACAATTATCAAATTACATTCTTATCTTAAATTGA

Coding sequence (CDS)

ATGGAGACGGCGGAAACAGCCGGTGCAAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTTCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTATTTCTTGAACGATATGGATCACAGTTGACATCCAATGAACTGCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAACCCAACATCAGATGAATTACACACTAGGTCAGTTATTGTGAAAAATAGGAGACGGGCATATCTAAATAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTCTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGGTAGGTAATAATGTAAATCAAGGGGAAGAGGAAGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAGGAAGAGAAAGAGGAAGTGGGGGAGGACACGAAAGGTAATAATAAGCTTGCGAATGGAGCTGATTCCATGGAGATAACAAGGGCCATGGATGATCAGCATGAAATGCCAGCAACAGAGAATAGTGAAGCTGCTGAGGGTGGGTCTAATCATTTAGTTCTTATTCAGATCAGGGAACTGGAGAAACATAAGAAGAAATGCGATTACGAACAATTATCAAATTACATTCTTATCTTAAATTGA

Protein sequence

METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEEEEEEEEAEEEKEEVGEDTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHLVLIQIRELEKHKKKCDYEQLSNYILILN
BLAST of CsGy3G002060 vs. NCBI nr
Match: XP_011650370.1 (PREDICTED: YTH domain-containing protein 1 [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 8.2e-124
Identity = 275/314 (87.58%), Postives = 283/314 (90.13%), Query Frame = 0

Query: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
           METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60

Query: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
           FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN
Sbjct: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120

Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
           KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180

Query: 181 IRGEQRRLGVAERDLVG---------NNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IRGEQRRLGVAERDLVG              XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IRGEQRRLGVAERDLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHLVLIQIRELEKH 300
           XXXXXX TKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNH+  +   +++  
Sbjct: 241 XXXXXXDTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQ 300

Query: 301 KKKCDYEQLSNYIL 306
             +  Y     ++L
Sbjct: 301 MDQFTYIMHQKFLL 314

BLAST of CsGy3G002060 vs. NCBI nr
Match: XP_008448764.1 (PREDICTED: coiled-coil domain-containing protein 97 [Cucumis melo])

HSP 1 Score: 428.7 bits (1101), Expect = 1.7e-116
Identity = 263/312 (84.29%), Postives = 274/312 (87.82%), Query Frame = 0

Query: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
           METAET  AKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1   METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60

Query: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
           FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIK+PTSDELHTRSVIVKNRRRAYL+
Sbjct: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120

Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
           KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180

Query: 181 IRGEQRRLGVAERDLVGNNV-------NQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IRGEQRRLGVAERDLVGNNV         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IRGEQRRLGVAERDLVGNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHLVLIQIRELEKHKK 300
           XXXXX        NG DSME+TRAMDDQHE PATENSE AEGGSNH+  +   +++    
Sbjct: 241 XXXXXXXXXXXXENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMD 300

Query: 301 KCDYEQLSNYIL 306
           +  Y     ++L
Sbjct: 301 QFTYIMHQKFLL 312

BLAST of CsGy3G002060 vs. NCBI nr
Match: KGN55812.1 (hypothetical protein Csa_3G017060 [Cucumis sativus])

HSP 1 Score: 410.2 bits (1053), Expect = 6.1e-111
Identity = 280/451 (62.08%), Postives = 288/451 (63.86%), Query Frame = 0

Query: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
           METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60

Query: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
           FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN
Sbjct: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120

Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
           KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180

Query: 181 IRGEQRRLGVAERDLVGNNVNQ-------------------------------------- 240
           IRGEQRRLGVAERDLVGNNVNQ                                      
Sbjct: 181 IRGEQRRLGVAERDLVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 ------------------------------------------------XXXXXXXXXXXX 306
                                                           XXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

BLAST of CsGy3G002060 vs. NCBI nr
Match: XP_022155554.1 (coiled-coil domain-containing protein 97 [Momordica charantia])

HSP 1 Score: 389.8 bits (1000), Expect = 8.5e-105
Identity = 241/303 (79.54%), Postives = 257/303 (84.82%), Query Frame = 0

Query: 3   TAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFL 62
           T  TA AK LS EAMDCLSERLSLQEDLYFPRALQSTA+NPSQRKAILLDLLSRD AVFL
Sbjct: 4   TTATATAKRLSGEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDAAVFL 63

Query: 63  ERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKL 122
           ERYGSQLTSNELHEFD LKDDYEINWHLKHLRSIK+PTSDELH+RSVIVKNRRRAYLNKL
Sbjct: 64  ERYGSQLTSNELHEFDTLKDDYEINWHLKHLRSIKSPTSDELHSRSVIVKNRRRAYLNKL 123

Query: 123 IYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR 182
           I DGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR
Sbjct: 124 ICDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIR 183

Query: 183 GEQRRLGVAERDLVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGN 242
           GEQRRLGVAERDL+GN+VN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          
Sbjct: 184 GEQRRLGVAERDLIGNDVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--------- 243

Query: 243 NKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHLVLIQIRELEKHKKKCDYEQLSN 302
              AN A SMEI+ AMD Q+E  AT+NS+AAEGGSN    +   +++    +  Y     
Sbjct: 244 ---ANAAHSMEISAAMDTQNEKSATDNSDAAEGGSNLGATLSEADMQDQMDQFTYIMHQK 294

Query: 303 YIL 306
           ++L
Sbjct: 304 FLL 294

BLAST of CsGy3G002060 vs. NCBI nr
Match: XP_022935567.1 (coiled-coil domain-containing protein 97 [Cucurbita moschata])

HSP 1 Score: 384.0 bits (985), Expect = 4.7e-103
Identity = 238/301 (79.07%), Postives = 261/301 (86.71%), Query Frame = 0

Query: 5   ETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLER 64
           E A AKGLSCEAMDCLSERLSLQ+ LYFPRALQSTA+NPSQRKAILLDLLSRDVAVFLER
Sbjct: 2   EAAAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLER 61

Query: 65  YGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKLIY 124
           YGSQLTSNELHEFD LKDDYEINWHLKHL SIK+PTSDELH+RSV+VKNRRRAYLNKLI 
Sbjct: 62  YGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLIC 121

Query: 125 DGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 184
           DGQYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE
Sbjct: 122 DGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 181

Query: 185 QRRLGVAERDLVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGNNK 244
           QRRLGVAERDLVGN++N  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    + 
Sbjct: 182 QRRLGVAERDLVGNDLNPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH- 241

Query: 245 LANGADSMEITRAMDDQHEMPATENSEAAEGGSNHLVLIQIRELEKHKKKCDYEQLSNYI 304
                 SME++ AMD+Q E  AT+N++AAEGGSNH   +   +++    +  Y     ++
Sbjct: 242 ------SMEVSTAMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIMHQKFL 295

Query: 305 L 306
           L
Sbjct: 302 L 295

BLAST of CsGy3G002060 vs. TAIR10
Match: AT5G47090.1 (unknown protein)

HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68
Identity = 127/183 (69.40%), Postives = 156/183 (85.25%), Query Frame = 0

Query: 16  AMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLERYGSQLTSNELH 75
           A + ++ERLS  ++LYFPRA+Q TA++  QRK+ILLDLL RD AVFLERYGS+L  +EL 
Sbjct: 19  AAEDITERLSSLDNLYFPRAVQLTAASSDQRKSILLDLLRRDPAVFLERYGSELLVDELL 78

Query: 76  EFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKLIYDGQYFSEDAMR 135
           EFDA+K DYE++WHLK+LR   +PTS+E+ +RSV V+NRR AYLNKL+ +GQYFSEDAMR
Sbjct: 79  EFDAMKHDYEVDWHLKNLRKKISPTSEEIKSRSVAVRNRRLAYLNKLVSEGQYFSEDAMR 138

Query: 136 EREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQRRLGVAERDL 195
           +REP+LHHEYVGKFQD  GR MARPGERWSETLMRR+EEA+LV +IR EQ+RLGV+E D 
Sbjct: 139 DREPYLHHEYVGKFQDVMGRNMARPGERWSETLMRRAEEAVLVTRIREEQQRLGVSESDW 198

Query: 196 VGN 199
           VGN
Sbjct: 199 VGN 201

BLAST of CsGy3G002060 vs. Swiss-Prot
Match: sp|Q9DBT3|CCD97_MOUSE (Coiled-coil domain-containing protein 97 OS=Mus musculus OX=10090 GN=Ccdc97 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.7e-08
Identity = 35/105 (33.33%), Postives = 57/105 (54.29%), Query Frame = 0

Query: 45  QRKAILLDLLSRDVAVFLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDEL 104
           ++ AIL  L  +   VFLER+ + L    L  F  L+ D+  +++   +          L
Sbjct: 91  EKVAILGQLYHKKPLVFLERFRTGLREEHLACFGHLRGDHRADFYCAEVARQGTARPRTL 150

Query: 105 HTRSVIVKNRRRAYLNKLIYDGQYFSEDAMREREPFLHHEYVGKF 150
            TR   ++NRR A L +LI  G+YFS++ MR R P L+ +Y+G++
Sbjct: 151 RTR---LRNRRYAALRELIQGGEYFSDEQMRFRAPLLYEQYIGQY 192

BLAST of CsGy3G002060 vs. Swiss-Prot
Match: sp|Q96F63|CCD97_HUMAN (Coiled-coil domain-containing protein 97 OS=Homo sapiens OX=9606 GN=CCDC97 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 0

Query: 45  QRKAILLDLLSRDVAVFLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDEL 104
           ++ AIL  L      VFLER+ + L    L  F  ++ D+  +++   +          L
Sbjct: 91  EKVAILAQLYHEKPLVFLERFRTGLREEHLACFGHVRGDHRADFYCAEVARQGTARPRTL 150

Query: 105 HTRSVIVKNRRRAYLNKLIYDGQYFSEDAMREREPFLHHEYVGKF 150
            TR   ++NRR A L +LI  G+YFS++ MR R P L+ +Y+G++
Sbjct: 151 RTR---LRNRRYAALRELIQGGEYFSDEQMRFRAPLLYEQYIGQY 192

BLAST of CsGy3G002060 vs. TrEMBL
Match: tr|A0A1S3BKG3|A0A1S3BKG3_CUCME (coiled-coil domain-containing protein 97 OS=Cucumis melo OX=3656 GN=LOC103490832 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.1e-116
Identity = 263/312 (84.29%), Postives = 274/312 (87.82%), Query Frame = 0

Query: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
           METAET  AKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1   METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60

Query: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
           FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIK+PTSDELHTRSVIVKNRRRAYL+
Sbjct: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120

Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
           KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180

Query: 181 IRGEQRRLGVAERDLVGNNV-------NQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           IRGEQRRLGVAERDLVGNNV         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 IRGEQRRLGVAERDLVGNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHLVLIQIRELEKHKK 300
           XXXXX        NG DSME+TRAMDDQHE PATENSE AEGGSNH+  +   +++    
Sbjct: 241 XXXXXXXXXXXXENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMD 300

Query: 301 KCDYEQLSNYIL 306
           +  Y     ++L
Sbjct: 301 QFTYIMHQKFLL 312

BLAST of CsGy3G002060 vs. TrEMBL
Match: tr|A0A0A0L5C7|A0A0A0L5C7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017060 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 4.0e-111
Identity = 280/451 (62.08%), Postives = 288/451 (63.86%), Query Frame = 0

Query: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
           METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1   METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60

Query: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
           FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN
Sbjct: 61  FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120

Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
           KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180

Query: 181 IRGEQRRLGVAERDLVGNNVNQ-------------------------------------- 240
           IRGEQRRLGVAERDLVGNNVNQ                                      
Sbjct: 181 IRGEQRRLGVAERDLVGNNVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 ------------------------------------------------XXXXXXXXXXXX 306
                                                           XXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

BLAST of CsGy3G002060 vs. TrEMBL
Match: tr|F6HTF2|F6HTF2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00030 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81
Identity = 151/184 (82.07%), Postives = 174/184 (94.57%), Query Frame = 0

Query: 15  EAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLERYGSQLTSNEL 74
           EAM+ ++ERLS +++LYFPRAL++TA+ PSQRK+ILLDLLSRD AVFLERYGSQLTS+EL
Sbjct: 16  EAMEKMTERLSCKDNLYFPRALEATATTPSQRKSILLDLLSRDPAVFLERYGSQLTSDEL 75

Query: 75  HEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLNKLIYDGQYFSEDAM 134
            EFD+LKDDYE++WHLKH+RS+ +PTS+EL +RSV VKNRRRAYLNKLIYDGQYFSEDAM
Sbjct: 76  REFDSLKDDYEVSWHLKHIRSVMSPTSEELKSRSVAVKNRRRAYLNKLIYDGQYFSEDAM 135

Query: 135 REREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQRRLGVAERD 194
           REREP+LHHEYVG+FQDPSGR MARPGERWSETL+RRSEEAMLVAKIRGEQ+RLGVAERD
Sbjct: 136 REREPYLHHEYVGRFQDPSGRSMARPGERWSETLLRRSEEAMLVAKIRGEQQRLGVAERD 195

Query: 195 LVGN 199
            VGN
Sbjct: 196 WVGN 199

BLAST of CsGy3G002060 vs. TrEMBL
Match: tr|A0A2I0I3W8|A0A2I0I3W8_PUNGR (Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_041501 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.0e-79
Identity = 153/201 (76.12%), Postives = 174/201 (86.57%), Query Frame = 0

Query: 2   ETAETAGAKG----LSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRD 61
           E AET+G  G    L+ E  + ++ERLS  E+LYFPRAL S+AS+PSQRK+I LDLLSRD
Sbjct: 3   EAAETSGGAGGRRELTSETKENIAERLSSLENLYFPRALHSSASDPSQRKSIFLDLLSRD 62

Query: 62  VAVFLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRA 121
           VAVFLERYGSQLT+ EL EFD LKDDYEINWHL HLRSIK+PTS EL +RS+ VKNRRRA
Sbjct: 63  VAVFLERYGSQLTNGELQEFDGLKDDYEINWHLNHLRSIKSPTSAELRSRSITVKNRRRA 122

Query: 122 YLNKLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAML 181
           YLNKL++DGQYFSEDAMREREP+LHHEYVGKFQDPS R MARPGE+WSETL+RRSEEA L
Sbjct: 123 YLNKLMHDGQYFSEDAMREREPYLHHEYVGKFQDPSSRSMARPGEKWSETLIRRSEEAFL 182

Query: 182 VAKIRGEQRRLGVAERDLVGN 199
           V++IR EQ+RLGVAERD VGN
Sbjct: 183 VSEIRREQQRLGVAERDWVGN 203

BLAST of CsGy3G002060 vs. TrEMBL
Match: tr|A0A218XUN9|A0A218XUN9_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr003731 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.0e-79
Identity = 153/201 (76.12%), Postives = 174/201 (86.57%), Query Frame = 0

Query: 2   ETAETAGAKG----LSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRD 61
           E AET+G  G    L+ E  + ++ERLS  E+LYFPRAL S+AS+PSQRK+I LDLLSRD
Sbjct: 3   EAAETSGGAGGRRELTSETKENIAERLSSLENLYFPRALHSSASDPSQRKSIFLDLLSRD 62

Query: 62  VAVFLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRA 121
           VAVFLERYGSQLT+ EL EFD LKDDYEINWHL HLRSIK+PTS EL +RS+ VKNRRRA
Sbjct: 63  VAVFLERYGSQLTNGELQEFDGLKDDYEINWHLNHLRSIKSPTSAELRSRSITVKNRRRA 122

Query: 122 YLNKLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAML 181
           YLNKL++DGQYFSEDAMREREP+LHHEYVGKFQDPS R MARPGE+WSETL+RRSEEA L
Sbjct: 123 YLNKLMHDGQYFSEDAMREREPYLHHEYVGKFQDPSSRSMARPGEKWSETLIRRSEEAFL 182

Query: 182 VAKIRGEQRRLGVAERDLVGN 199
           V++IR EQ+RLGVAERD VGN
Sbjct: 183 VSEIRREQQRLGVAERDWVGN 203

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011650370.18.2e-12487.58PREDICTED: YTH domain-containing protein 1 [Cucumis sativus][more]
XP_008448764.11.7e-11684.29PREDICTED: coiled-coil domain-containing protein 97 [Cucumis melo][more]
KGN55812.16.1e-11162.08hypothetical protein Csa_3G017060 [Cucumis sativus][more]
XP_022155554.18.5e-10579.54coiled-coil domain-containing protein 97 [Momordica charantia][more]
XP_022935567.14.7e-10379.07coiled-coil domain-containing protein 97 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT5G47090.11.6e-6869.40unknown protein[more]
Match NameE-valueIdentityDescription
sp|Q9DBT3|CCD97_MOUSE8.7e-0833.33Coiled-coil domain-containing protein 97 OS=Mus musculus OX=10090 GN=Ccdc97 PE=1... [more]
sp|Q96F63|CCD97_HUMAN1.5e-0732.38Coiled-coil domain-containing protein 97 OS=Homo sapiens OX=9606 GN=CCDC97 PE=1 ... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BKG3|A0A1S3BKG3_CUCME1.1e-11684.29coiled-coil domain-containing protein 97 OS=Cucumis melo OX=3656 GN=LOC103490832... [more]
tr|A0A0A0L5C7|A0A0A0L5C7_CUCSA4.0e-11162.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017060 PE=4 SV=1[more]
tr|F6HTF2|F6HTF2_VITVI1.5e-8182.07Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00030 PE=4 SV=... [more]
tr|A0A2I0I3W8|A0A2I0I3W8_PUNGR7.0e-7976.12Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_041501 P... [more]
tr|A0A218XUN9|A0A218XUN9_PUNGR7.0e-7976.12Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr003731 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018613DUF2052_coiled-coil
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005686 U2 snRNP
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G002060.1CsGy3G002060.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..277
IPR018613Protein of unknown function DUF2052, coiled-coilPFAMPF09747DUF2052coord: 113..269
e-value: 1.2E-29
score: 103.8
IPR018613Protein of unknown function DUF2052, coiled-coilPANTHERPTHR31840FAMILY NOT NAMEDcoord: 15..264

The following gene(s) are paralogous to this gene:

None