CsaV3_2G030640 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGAACGTGTCGTATCACCAAGATTGAAGGCCATGCAACTTGGACACGTACTACTCAAAAGAACTCAAAATCTCATCCAGCTTCCACCAAAATCTTCATCCTTTTCCCATCCATATTCTGTTATACATATAAGGACAAACCCAATTTCAACATCATCAGAATCCAAAACCACAGCGCCGGAGAGCCCTCGTCATCATGTCCGATCAATCAAAGCCCGTATCCGCCCGTACACTCTACAATTCCACTTCTTCCTCTCGCCAAGCCGTCAAGTTCTTGACGGCGGCTACAATCGCCACCTTCTTCCTTGTCTCTTCTGGCTTCACCATAACCGGAACAGTTCTAATTCTCATACTCTCCACTCCAATTCTCGTCCTCTTTAGTCCCATTTTGGTGCCGGCGGTAACTGTTTTAGTCTTATCAGCCGCCGGTTTGTTCTTCTCAGCAACTTGTGCGGTGGCAGCCGTAGCTGCGTTGTCGTGGTTGTACAGTTACATGACGGGAGATCAGCCAGTGGGGGCGGAGCAGCTGGATTTTGCAAGGGACAAAATTGTAGAGATGGCGAAGGACATGAAGGAAAAGGCCACAACACAAGAACAATCTTGA ATGAAAAGAACGTGTCGTATCACCAAGATTGAAGGCCATGCAACTTGGACACGACAAACCCAATTTCAACATCATCAGAATCCAAAACCACAGCGCCGGAGAGCCCTCGTCATCATGTCCGATCAATCAAAGCCCGTATCCGCCCGTACACTCTACAATTCCACTTCTTCCTCTCGCCAAGCCGTCAAGTTCTTGACGGCGGCTACAATCGCCACCTTCTTCCTTGTCTCTTCTGGCTTCACCATAACCGGAACAGTTCTAATTCTCATACTCTCCACTCCAATTCTCGTCCTCTTTAGTCCCATTTTGGTGCCGGCGGTAACTGTTTTAGTCTTATCAGCCGCCGGTTTGTTCTTCTCAGCAACTTGTGCGGTGGCAGCCGTAGCTGCGTTGTCGTGGTTGTACAGTTACATGACGGGAGATCAGCCAGTGGGGGCGGAGCAGCTGGATTTTGCAAGGGACAAAATTGTAGAGATGGCGAAGGACATGAAGGAAAAGGCCACAACACAAGAACAATCTTGA ATGAAAAGAACGTGTCGTATCACCAAGATTGAAGGCCATGCAACTTGGACACGACAAACCCAATTTCAACATCATCAGAATCCAAAACCACAGCGCCGGAGAGCCCTCGTCATCATGTCCGATCAATCAAAGCCCGTATCCGCCCGTACACTCTACAATTCCACTTCTTCCTCTCGCCAAGCCGTCAAGTTCTTGACGGCGGCTACAATCGCCACCTTCTTCCTTGTCTCTTCTGGCTTCACCATAACCGGAACAGTTCTAATTCTCATACTCTCCACTCCAATTCTCGTCCTCTTTAGTCCCATTTTGGTGCCGGCGGTAACTGTTTTAGTCTTATCAGCCGCCGGTTTGTTCTTCTCAGCAACTTGTGCGGTGGCAGCCGTAGCTGCGTTGTCGTGGTTGTACAGTTACATGACGGGAGATCAGCCAGTGGGGGCGGAGCAGCTGGATTTTGCAAGGGACAAAATTGTAGAGATGGCGAAGGACATGAAGGAAAAGGCCACAACACAAGAACAATCTTGA MKRTCRITKIEGHATWTRQTQFQHHQNPKPQRRRALVIMSDQSKPVSARTLYNSTSSSRQAVKFLTAATIATFFLVSSGFTITGTVLILILSTPILVLFSPILVPAVTVLVLSAAGLFFSATCAVAAVAALSWLYSYMTGDQPVGAEQLDFARDKIVEMAKDMKEKATTQEQS
BLAST of CsaV3_2G030640 vs. NCBI nr
Match: XP_004148427.1 (PREDICTED: oleosin 16 kDa-like [Cucumis sativus] >KGN62791.1 hypothetical protein Csa_2G372860 [Cucumis sativus]) HSP 1 Score: 183.3 bits (464), Expect = 6.9e-43 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. NCBI nr
Match: XP_016899960.1 (PREDICTED: oleosin 1-like [Cucumis melo]) HSP 1 Score: 147.9 bits (372), Expect = 3.2e-32 Identity = 113/132 (85.61%), Postives = 120/132 (90.91%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. NCBI nr
Match: XP_002275496.1 (PREDICTED: oleosin 1 [Vitis vinifera] >CAN74835.1 hypothetical protein VITISV_023324 [Vitis vinifera]) HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18 Identity = 62/129 (48.06%), Postives = 76/129 (58.91%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. NCBI nr
Match: XP_018845470.1 (PREDICTED: oleosin 1 [Juglans regia]) HSP 1 Score: 99.0 bits (245), Expect = 1.7e-17 Identity = 58/129 (44.96%), Postives = 76/129 (58.91%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. NCBI nr
Match: XP_012452367.1 (PREDICTED: oleosin 1 [Gossypium raimondii] >KJB65620.1 hypothetical protein B456_010G103700 [Gossypium raimondii]) HSP 1 Score: 93.2 bits (230), Expect = 9.3e-16 Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. TAIR10
Match: AT2G25890.1 (Oleosin family protein) HSP 1 Score: 79.3 bits (194), Expect = 2.5e-15 Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. TAIR10
Match: AT4G25140.1 (oleosin 1) HSP 1 Score: 54.7 bits (130), Expect = 6.7e-08 Identity = 35/112 (31.25%), Postives = 51/112 (45.54%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. TAIR10
Match: AT3G18570.1 (Oleosin family protein) HSP 1 Score: 43.5 bits (101), Expect = 1.5e-04 Identity = 19/43 (44.19%), Postives = 27/43 (62.79%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. TAIR10
Match: AT5G51210.1 (oleosin3) HSP 1 Score: 42.7 bits (99), Expect = 2.6e-04 Identity = 36/130 (27.69%), Postives = 57/130 (43.85%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. Swiss-Prot
Match: sp|P29109|OLEO5_BRANA (Oleosin Bn-V (Fragment) OS=Brassica napus OX=3708 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.4e-08 Identity = 37/112 (33.04%), Postives = 52/112 (46.43%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. Swiss-Prot
Match: sp|Q43804|OLEO1_PRUDU (Oleosin 1 OS=Prunus dulcis OX=3755 GN=OLE1 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.1e-07 Identity = 25/43 (58.14%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. Swiss-Prot
Match: sp|P29525|OLEO1_ARATH (Oleosin 18.5 kDa OS=Arabidopsis thaliana OX=3702 GN=At4g25140 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06 Identity = 35/112 (31.25%), Postives = 51/112 (45.54%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. Swiss-Prot
Match: sp|P29110|OLEO3_BRANA (Oleosin Bn-III OS=Brassica napus OX=3708 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06 Identity = 34/110 (30.91%), Postives = 51/110 (46.36%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. Swiss-Prot
Match: sp|Q42980|OLEO1_ORYSJ (Oleosin 16 kDa OS=Oryza sativa subsp. japonica OX=39947 GN=OLE16 PE=2 SV=3) HSP 1 Score: 50.4 bits (119), Expect = 2.3e-05 Identity = 21/43 (48.84%), Postives = 31/43 (72.09%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. TrEMBL
Match: tr|A0A0A0LRY3|A0A0A0LRY3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372860 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 4.5e-43 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. TrEMBL
Match: tr|A0A1S4DW75|A0A1S4DW75_CUCME (oleosin 1-like OS=Cucumis melo OX=3656 GN=LOC103488162 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32 Identity = 113/132 (85.61%), Postives = 120/132 (90.91%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. TrEMBL
Match: tr|A5BPD9|A5BPD9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0008g00540 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 7.8e-19 Identity = 62/129 (48.06%), Postives = 76/129 (58.91%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. TrEMBL
Match: tr|A0A2I4GNJ1|A0A2I4GNJ1_9ROSI (Oleosin OS=Juglans regia OX=51240 GN=LOC109009462 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.1e-17 Identity = 58/129 (44.96%), Postives = 76/129 (58.91%), Query Frame = 0
BLAST of CsaV3_2G030640 vs. TrEMBL
Match: tr|A0A0D2V8E6|A0A0D2V8E6_GOSRA (Oleosin OS=Gossypium raimondii OX=29730 GN=B456_010G103700 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.2e-16 Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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