CsaV3_2G026030 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGATTATATAAGTTCGAGGATTTAATAAGTTTTCTTATGGAAAAAAATATATACCAAAAATGTGTATGGTTAGGCAGAACAGATTTGTGTTAAACGTAGGATTAAAAAATAGTGTTGGGTTAGTTTGATGCTTAATCTTTCTTTTACGCAAAAACCGGGGAATTGGTTCGGATTGGAGCTGAGGCCGTGCATTCTTCTTCGAGTAACAAAATTCCATTGGAAAAATGGCTGCAGTCCGTTTCATTTTCCAACTCCGAAACCATCCAATTGGCGGAATAAATAATTTACTTCCACGAACTTGTCTTTTCCTCTTCACTGATTCGATTTTCTACTGATTGATGTAATAAGGTAACAGTTCTTTAGAGAATTCGTTTCCATTTACCGATGGAAGAGTGGGGCCGGAGCCAGATTTCATCTCAGCCCTCCAACTATGTCACTATTCTTGATCTTCGAGAACGGTGGCTTAAAGAAAACGAGCGAAAACACAAAGAGAAGGAAGATTTGAAACAGCTTGAGCTAGAAGAACGGGAACAGAAGGTTCCCCGGACGGAACCTGATAAGAAGGATGATCAGAAGCCGGTGGTTCGGAAGCCACGAAGAAATGCTTCTTCTTGGAGCAGGAATGGGAGTGAGAAGGTTCGGAGATATTATCGAGCTAATCCACGGAATGTGAACAAGATATGCAAGAAGATTCTGGATGAAAGCGAGCCTGAGCTGGCTATTCCTCGAATCGAGAGAGACAAGAAGAAGGAAAAGAAGGGTCGCAAGAAGAATCGTAGGATACGAAAGGGAAAGATGGATAAAACGTCGCCAACACCTGAGGAGAACTTGAAGGAGGGATTCCGGGAGAAGGAATGCGAGGTTGGGGTGCAGAACGGGAAGAAAAATGTTAGGGCAAGAAAAATCGATGAAAAGAAGTGGACTGGGAGTCGACGTGGACCTGAGAAAACTGGCTACGCTCATGAGATGAAGGAGATGGAAAACAAATTAAGCCTTATTTCAGTGAGTTTCGAAATTAAAAGAGGGAGGAATAATGGTGTTGACAGAGGTAGTAGTCAAGGCAATCGGAATTTCAGAGATCGTCGGAATCTTGATCGTCGGGGTCCTCGTAAACAGAGGGATGTTAAAATGATTTGGGTGAGGAAAGATGAGCTTTCAAAAGGTGCATAGTATACAGTTTATGAATCTTGGTTTATTCTGAATCACAAGAAGATAATCTGGTGAGCATTTGCTTTCTTGGGTTTTGATTATCTTTTTTCATTAATAATAGGTATCTAAACTAATTGAATTTCATAGTTTCTAATGAACACACTGCTTACTTAGAGAAACTGGAGGTTGATTTAATGGTATAGGTGAGGGGAACCTAAGGAATAAAAATTAAGAGTCTGAATTGTTTGAACGTTAATGTTATAAAACATAACAGTAGAAAGCACTCAGTATAATATAAGAGTTTGAATGCTTGTGGTGACTGAGTTGATGGTGAAAGTGAACCATCTGTTTTTCTAGGGATTATGTCTATGGTGGATGCAAAGTAGCTAAGATAGCCTACACATACATTTGTGCCTGGTTATAATTGCTTTAGTGGGGCAATAGTAATTTGTACATGAGAAGGCATCCTATGCCACATTTTCTCCCCTTGTGTTTTGCCTTTTGTAAATATGAGGTTCACAGTCCGGTTTCAAGTTTTAGTTAAGTTTGGATGGATTTTTCTATGTATGATACTGCTATAAATAATAAGATCGTGAATAGATAATTTTCATGTATAGGCTGTAGATAGTATTAGTTATAGTGATCCTCTAGGAAATATAACTATGACAATTTTTGTTGGAACTAGTTGAAAAGAAGTCATTGTGTTGTGAGATATTATTGTGTTAACCAATGTCAACCATGCTTCCAAGTTGTAACGAGGGGTTTGTAATAAGTATGTAAACTGTTGTTTAGTTTATACTGAACATATGTTTCATTGTAATTCATAGTCCTTAGGCTTAATTTACATGATATTATATATTATTATGTGCCCTTAGACGGTAGGTAGGTCACAAGTTCAAGTCTTGTATCTAAGCCCACAACTATTAACTGATGATTGTGCTTATTAGACTAACCCAACAACTTATACTTTTCAATTTAGTGTGATTTTTAATAAGTATCTGTGTCATTCACCCCCCTGATTTTTTTTTTTCTTAACAGGTTCGGAATCTATTCAGAGTAGGAAGAGAACAGACAAAACTAAAGTACATAGGTCTTCTTATCTGTTGAAACACTTCGAATGCAGGTTAGAACTACTGGATGGTGATAACTATATGAAAGATCAAGTAGTTAACTAGATATTTGTATAGCACGTGAAAAATATGAGCTAAATAACACACACTCATACCATAACTGTGACCATGTTGGGTTGAGAAATATAATCAGAAGTGTTCAGTATTTGATGGTATTTTATTGAGCAGATGGCTCATTTTATTCCCCTCTTTTGCAAGTCTCTCTCTTCAACCTTCTTCCTTACCAATTACTTCTTTCTCTTGTATAGGCTGATCTCCATTAGGTGACACTCCTACAAGTTTCCCCTCTTTCTTTAGGGATTAGTTCTCCTACTCGATCCTTCACCTGTTGGAAACTATGATCTTATTTTGAGAACAATATTTGCATTCTTTTGTTTGATAATTGATAAATGGGTTATTTATGTCTGTTTGATAATCACTTCCTATCTAATTAGTTTTAAAAATTTTATGTTCAGTTTGTTGCAACTATTTTACAACCATTTTTACTATATGAACATTTTAAG ATGGAAGAGTGGGGCCGGAGCCAGATTTCATCTCAGCCCTCCAACTATGTCACTATTCTTGATCTTCGAGAACGGTGGCTTAAAGAAAACGAGCGAAAACACAAAGAGAAGGAAGATTTGAAACAGCTTGAGCTAGAAGAACGGGAACAGAAGGTTCCCCGGACGGAACCTGATAAGAAGGATGATCAGAAGCCGGTGGTTCGGAAGCCACGAAGAAATGCTTCTTCTTGGAGCAGGAATGGGAGTGAGAAGGTTCGGAGATATTATCGAGCTAATCCACGGAATGTGAACAAGATATGCAAGAAGATTCTGGATGAAAGCGAGCCTGAGCTGGCTATTCCTCGAATCGAGAGAGACAAGAAGAAGGAAAAGAAGGGTCGCAAGAAGAATCGTAGGATACGAAAGGGAAAGATGGATAAAACGTCGCCAACACCTGAGGAGAACTTGAAGGAGGGATTCCGGGAGAAGGAATGCGAGGTTGGGGTGCAGAACGGGAAGAAAAATGTTAGGGCAAGAAAAATCGATGAAAAGAAGTGGACTGGGAGTCGACGTGGACCTGAGAAAACTGGCTACGCTCATGAGATGAAGGAGATGGAAAACAAATTAAGCCTTATTTCAGTGAGTTTCGAAATTAAAAGAGGGAGGAATAATGGTGTTGACAGAGGTAGTAGTCAAGGCAATCGGAATTTCAGAGATCGTCGGAATCTTGATCGTCGGGGTCCTCGTAAACAGAGGGATGTTAAAATGATTTGGGTGAGGAAAGATGAGCTTTCAAAAGGTGCATAG ATGGAAGAGTGGGGCCGGAGCCAGATTTCATCTCAGCCCTCCAACTATGTCACTATTCTTGATCTTCGAGAACGGTGGCTTAAAGAAAACGAGCGAAAACACAAAGAGAAGGAAGATTTGAAACAGCTTGAGCTAGAAGAACGGGAACAGAAGGTTCCCCGGACGGAACCTGATAAGAAGGATGATCAGAAGCCGGTGGTTCGGAAGCCACGAAGAAATGCTTCTTCTTGGAGCAGGAATGGGAGTGAGAAGGTTCGGAGATATTATCGAGCTAATCCACGGAATGTGAACAAGATATGCAAGAAGATTCTGGATGAAAGCGAGCCTGAGCTGGCTATTCCTCGAATCGAGAGAGACAAGAAGAAGGAAAAGAAGGGTCGCAAGAAGAATCGTAGGATACGAAAGGGAAAGATGGATAAAACGTCGCCAACACCTGAGGAGAACTTGAAGGAGGGATTCCGGGAGAAGGAATGCGAGGTTGGGGTGCAGAACGGGAAGAAAAATGTTAGGGCAAGAAAAATCGATGAAAAGAAGTGGACTGGGAGTCGACGTGGACCTGAGAAAACTGGCTACGCTCATGAGATGAAGGAGATGGAAAACAAATTAAGCCTTATTTCAGTGAGTTTCGAAATTAAAAGAGGGAGGAATAATGGTGTTGACAGAGGTAGTAGTCAAGGCAATCGGAATTTCAGAGATCGTCGGAATCTTGATCGTCGGGGTCCTCGTAAACAGAGGGATGTTAAAATGATTTGGGTGAGGAAAGATGAGCTTTCAAAAGGTGCATAG MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKKDDQKPVVRKPRRNASSWSRNGSEKVRRYYRANPRNVNKICKKILDESEPELAIPRIERDKKKEKKGRKKNRRIRKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDEKKWTGSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNLDRRGPRKQRDVKMIWVRKDELSKGA
BLAST of CsaV3_2G026030 vs. NCBI nr
Match: XP_011649562.1 (PREDICTED: uncharacterized protein DDB_G0286299-like [Cucumis sativus] >XP_011649563.1 PREDICTED: uncharacterized protein DDB_G0286299-like [Cucumis sativus] >KGN62437.1 hypothetical protein Csa_2G354630 [Cucumis sativus]) HSP 1 Score: 475.7 bits (1223), Expect = 1.0e-130 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of CsaV3_2G026030 vs. NCBI nr
Match: XP_008444535.1 (PREDICTED: glutamic acid-rich protein [Cucumis melo] >XP_008444536.1 PREDICTED: glutamic acid-rich protein [Cucumis melo]) HSP 1 Score: 387.5 bits (994), Expect = 3.6e-104 Identity = 225/266 (84.59%), Postives = 235/266 (88.35%), Query Frame = 0
BLAST of CsaV3_2G026030 vs. NCBI nr
Match: XP_022997592.1 (uncharacterized protein LOC111492480 isoform X1 [Cucurbita maxima] >XP_022997593.1 uncharacterized protein LOC111492480 isoform X1 [Cucurbita maxima] >XP_022997594.1 uncharacterized protein LOC111492480 isoform X1 [Cucurbita maxima]) HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45 Identity = 134/264 (50.76%), Postives = 158/264 (59.85%), Query Frame = 0
BLAST of CsaV3_2G026030 vs. NCBI nr
Match: XP_022997595.1 (uncharacterized protein LOC111492480 isoform X2 [Cucurbita maxima]) HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45 Identity = 134/264 (50.76%), Postives = 158/264 (59.85%), Query Frame = 0
BLAST of CsaV3_2G026030 vs. NCBI nr
Match: XP_023545894.1 (uncharacterized protein LOC111805190 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 188.3 bits (477), Expect = 3.2e-44 Identity = 131/264 (49.62%), Postives = 156/264 (59.09%), Query Frame = 0
BLAST of CsaV3_2G026030 vs. TrEMBL
Match: tr|A0A0A0LNR9|A0A0A0LNR9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354630 PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 6.7e-131 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of CsaV3_2G026030 vs. TrEMBL
Match: tr|A0A1S3BBD2|A0A1S3BBD2_CUCME (glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103487826 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 2.4e-104 Identity = 225/266 (84.59%), Postives = 235/266 (88.35%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |