CsaV3_2G026030.1 (mRNA) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G026030.1
TypemRNA
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionglutamic acid-rich protein
Locationchr2 : 17901332 .. 17904113 (-)
Sequence length786
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATTATATAAGTTCGAGGATTTAATAAGTTTTCTTATGGAAAAAAATATATACCAAAAATGTGTATGGTTAGGCAGAACAGATTTGTGTTAAACGTAGGATTAAAAAATAGTGTTGGGTTAGTTTGATGCTTAATCTTTCTTTTACGCAAAAACCGGGGAATTGGTTCGGATTGGAGCTGAGGCCGTGCATTCTTCTTCGAGTAACAAAATTCCATTGGAAAAATGGCTGCAGTCCGTTTCATTTTCCAACTCCGAAACCATCCAATTGGCGGAATAAATAATTTACTTCCACGAACTTGTCTTTTCCTCTTCACTGATTCGATTTTCTACTGATTGATGTAATAAGGTAACAGTTCTTTAGAGAATTCGTTTCCATTTACCGATGGAAGAGTGGGGCCGGAGCCAGATTTCATCTCAGCCCTCCAACTATGTCACTATTCTTGATCTTCGAGAACGGTGGCTTAAAGAAAACGAGCGAAAACACAAAGAGAAGGAAGATTTGAAACAGCTTGAGCTAGAAGAACGGGAACAGAAGGTTCCCCGGACGGAACCTGATAAGAAGGATGATCAGAAGCCGGTGGTTCGGAAGCCACGAAGAAATGCTTCTTCTTGGAGCAGGAATGGGAGTGAGAAGGTTCGGAGATATTATCGAGCTAATCCACGGAATGTGAACAAGATATGCAAGAAGATTCTGGATGAAAGCGAGCCTGAGCTGGCTATTCCTCGAATCGAGAGAGACAAGAAGAAGGAAAAGAAGGGTCGCAAGAAGAATCGTAGGATACGAAAGGGAAAGATGGATAAAACGTCGCCAACACCTGAGGAGAACTTGAAGGAGGGATTCCGGGAGAAGGAATGCGAGGTTGGGGTGCAGAACGGGAAGAAAAATGTTAGGGCAAGAAAAATCGATGAAAAGAAGTGGACTGGGAGTCGACGTGGACCTGAGAAAACTGGCTACGCTCATGAGATGAAGGAGATGGAAAACAAATTAAGCCTTATTTCAGTGAGTTTCGAAATTAAAAGAGGGAGGAATAATGGTGTTGACAGAGGTAGTAGTCAAGGCAATCGGAATTTCAGAGATCGTCGGAATCTTGATCGTCGGGGTCCTCGTAAACAGAGGGATGTTAAAATGATTTGGGTGAGGAAAGATGAGCTTTCAAAAGGTGCATAGTATACAGTTTATGAATCTTGGTTTATTCTGAATCACAAGAAGATAATCTGGTGAGCATTTGCTTTCTTGGGTTTTGATTATCTTTTTTCATTAATAATAGGTATCTAAACTAATTGAATTTCATAGTTTCTAATGAACACACTGCTTACTTAGAGAAACTGGAGGTTGATTTAATGGTATAGGTGAGGGGAACCTAAGGAATAAAAATTAAGAGTCTGAATTGTTTGAACGTTAATGTTATAAAACATAACAGTAGAAAGCACTCAGTATAATATAAGAGTTTGAATGCTTGTGGTGACTGAGTTGATGGTGAAAGTGAACCATCTGTTTTTCTAGGGATTATGTCTATGGTGGATGCAAAGTAGCTAAGATAGCCTACACATACATTTGTGCCTGGTTATAATTGCTTTAGTGGGGCAATAGTAATTTGTACATGAGAAGGCATCCTATGCCACATTTTCTCCCCTTGTGTTTTGCCTTTTGTAAATATGAGGTTCACAGTCCGGTTTCAAGTTTTAGTTAAGTTTGGATGGATTTTTCTATGTATGATACTGCTATAAATAATAAGATCGTGAATAGATAATTTTCATGTATAGGCTGTAGATAGTATTAGTTATAGTGATCCTCTAGGAAATATAACTATGACAATTTTTGTTGGAACTAGTTGAAAAGAAGTCATTGTGTTGTGAGATATTATTGTGTTAACCAATGTCAACCATGCTTCCAAGTTGTAACGAGGGGTTTGTAATAAGTATGTAAACTGTTGTTTAGTTTATACTGAACATATGTTTCATTGTAATTCATAGTCCTTAGGCTTAATTTACATGATATTATATATTATTATGTGCCCTTAGACGGTAGGTAGGTCACAAGTTCAAGTCTTGTATCTAAGCCCACAACTATTAACTGATGATTGTGCTTATTAGACTAACCCAACAACTTATACTTTTCAATTTAGTGTGATTTTTAATAAGTATCTGTGTCATTCACCCCCCTGATTTTTTTTTTTCTTAACAGGTTCGGAATCTATTCAGAGTAGGAAGAGAACAGACAAAACTAAAGTACATAGGTCTTCTTATCTGTTGAAACACTTCGAATGCAGGTTAGAACTACTGGATGGTGATAACTATATGAAAGATCAAGTAGTTAACTAGATATTTGTATAGCACGTGAAAAATATGAGCTAAATAACACACACTCATACCATAACTGTGACCATGTTGGGTTGAGAAATATAATCAGAAGTGTTCAGTATTTGATGGTATTTTATTGAGCAGATGGCTCATTTTATTCCCCTCTTTTGCAAGTCTCTCTCTTCAACCTTCTTCCTTACCAATTACTTCTTTCTCTTGTATAGGCTGATCTCCATTAGGTGACACTCCTACAAGTTTCCCCTCTTTCTTTAGGGATTAGTTCTCCTACTCGATCCTTCACCTGTTGGAAACTATGATCTTATTTTGAGAACAATATTTGCATTCTTTTGTTTGATAATTGATAAATGGGTTATTTATGTCTGTTTGATAATCACTTCCTATCTAATTAGTTTTAAAAATTTTATGTTCAGTTTGTTGCAACTATTTTACAACCATTTTTACTATATGAACATTTTAAG

mRNA sequence

ATGGAAGAGTGGGGCCGGAGCCAGATTTCATCTCAGCCCTCCAACTATGTCACTATTCTTGATCTTCGAGAACGGTGGCTTAAAGAAAACGAGCGAAAACACAAAGAGAAGGAAGATTTGAAACAGCTTGAGCTAGAAGAACGGGAACAGAAGGTTCCCCGGACGGAACCTGATAAGAAGGATGATCAGAAGCCGGTGGTTCGGAAGCCACGAAGAAATGCTTCTTCTTGGAGCAGGAATGGGAGTGAGAAGGTTCGGAGATATTATCGAGCTAATCCACGGAATGTGAACAAGATATGCAAGAAGATTCTGGATGAAAGCGAGCCTGAGCTGGCTATTCCTCGAATCGAGAGAGACAAGAAGAAGGAAAAGAAGGGTCGCAAGAAGAATCGTAGGATACGAAAGGGAAAGATGGATAAAACGTCGCCAACACCTGAGGAGAACTTGAAGGAGGGATTCCGGGAGAAGGAATGCGAGGTTGGGGTGCAGAACGGGAAGAAAAATGTTAGGGCAAGAAAAATCGATGAAAAGAAGTGGACTGGGAGTCGACGTGGACCTGAGAAAACTGGCTACGCTCATGAGATGAAGGAGATGGAAAACAAATTAAGCCTTATTTCAGTGAGTTTCGAAATTAAAAGAGGGAGGAATAATGGTGTTGACAGAGGTAGTAGTCAAGGCAATCGGAATTTCAGAGATCGTCGGAATCTTGATCGTCGGGGTCCTCGTAAACAGAGGGATGTTAAAATGATTTGGGTGAGGAAAGATGAGCTTTCAAAAGGTGCATAG

Coding sequence (CDS)

ATGGAAGAGTGGGGCCGGAGCCAGATTTCATCTCAGCCCTCCAACTATGTCACTATTCTTGATCTTCGAGAACGGTGGCTTAAAGAAAACGAGCGAAAACACAAAGAGAAGGAAGATTTGAAACAGCTTGAGCTAGAAGAACGGGAACAGAAGGTTCCCCGGACGGAACCTGATAAGAAGGATGATCAGAAGCCGGTGGTTCGGAAGCCACGAAGAAATGCTTCTTCTTGGAGCAGGAATGGGAGTGAGAAGGTTCGGAGATATTATCGAGCTAATCCACGGAATGTGAACAAGATATGCAAGAAGATTCTGGATGAAAGCGAGCCTGAGCTGGCTATTCCTCGAATCGAGAGAGACAAGAAGAAGGAAAAGAAGGGTCGCAAGAAGAATCGTAGGATACGAAAGGGAAAGATGGATAAAACGTCGCCAACACCTGAGGAGAACTTGAAGGAGGGATTCCGGGAGAAGGAATGCGAGGTTGGGGTGCAGAACGGGAAGAAAAATGTTAGGGCAAGAAAAATCGATGAAAAGAAGTGGACTGGGAGTCGACGTGGACCTGAGAAAACTGGCTACGCTCATGAGATGAAGGAGATGGAAAACAAATTAAGCCTTATTTCAGTGAGTTTCGAAATTAAAAGAGGGAGGAATAATGGTGTTGACAGAGGTAGTAGTCAAGGCAATCGGAATTTCAGAGATCGTCGGAATCTTGATCGTCGGGGTCCTCGTAAACAGAGGGATGTTAAAATGATTTGGGTGAGGAAAGATGAGCTTTCAAAAGGTGCATAG

Protein sequence

MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKKDDQKPVVRKPRRNASSWSRNGSEKVRRYYRANPRNVNKICKKILDESEPELAIPRIERDKKKEKKGRKKNRRIRKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDEKKWTGSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNLDRRGPRKQRDVKMIWVRKDELSKGA
Homology
[Close]
BLAST of CsaV3_2G026030.1 vs. NCBI nr
Match: XP_011649562.1 (PREDICTED: uncharacterized protein DDB_G0286299-like [Cucumis sativus] >XP_011649563.1 PREDICTED: uncharacterized protein DDB_G0286299-like [Cucumis sativus] >KGN62437.1 hypothetical protein Csa_2G354630 [Cucumis sativus])

HSP 1 Score: 475.7 bits (1223), Expect = 1.0e-130
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 

Query: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60
           MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK
Sbjct: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60

Query: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYRANPRNVNKICKKILDESEPELAIPRIERDK 120
           DDQKPVVRKPRRNASSWSRNGSEKVRRYYRANPRNVNKICKKILDESEPELAIPRIERDK
Sbjct: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYRANPRNVNKICKKILDESEPELAIPRIERDK 120

Query: 121 KXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDEKKWT 180
           KXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDEKKWT
Sbjct: 121 KXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDEKKWT 180

Query: 181 GSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNLDRRG 240
           GSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNLDRRG
Sbjct: 181 GSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNLDRRG 240

Query: 241 PRKQRDVKMIWVRKDELSKGA 262
           PRKQRDVKMIWVRKDELSKGA
Sbjct: 241 PRKQRDVKMIWVRKDELSKGA 261

[Close]
BLAST of CsaV3_2G026030.1 vs. NCBI nr
Match: XP_008444535.1 (PREDICTED: glutamic acid-rich protein [Cucumis melo] >XP_008444536.1 PREDICTED: glutamic acid-rich protein [Cucumis melo])

HSP 1 Score: 387.5 bits (994), Expect = 3.6e-104
Identity = 225/266 (84.59%), Postives = 235/266 (88.35%), Query Frame = 0 

Query: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60
           MEEWGR++I S+PSNYVTILDLRERWLKENER+HKEKEDLKQL       KVPRTEP+KK
Sbjct: 1   MEEWGRTRIPSRPSNYVTILDLRERWLKENEREHKEKEDLKQLXXXXXXXKVPRTEPEKK 60

Query: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYRA----NPRNVNKICKKILDESEPELAIPRI 120
           DDQKPVVRKPRRNASSWSRNG EKVR YYRA    NP+NVN+ CKKI DE EPEL +P I
Sbjct: 61  DDQKPVVRKPRRNASSWSRNGREKVRMYYRAVPVSNPQNVNETCKKIEDEREPELPVPPI 120

Query: 121 ERDKKXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDE 180
           ERDK XXXXXXXXXXXXX  KMDKTSPTPEENLKE   EKECEVGVQNGKKNVRARKIDE
Sbjct: 121 ERDKXXXXXXXXXXXXXXXXKMDKTSPTPEENLKEEVWEKECEVGVQNGKKNVRARKIDE 180

Query: 181 KKWTGSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRG-SSQGNRNFRDRRN 240
           KK TGS+RGPEKTGYAHEMKEMENKLSLISVS EIKRG NNGVDRG SSQGNRNFR  RN
Sbjct: 181 KKGTGSQRGPEKTGYAHEMKEMENKLSLISVSLEIKRGTNNGVDRGSSSQGNRNFRYHRN 240

Query: 241 LDRRGPRKQRDVKMIWVRKDELSKGA 262
           LDRRGPRKQ+DVKMIWVRKDELSKGA
Sbjct: 241 LDRRGPRKQKDVKMIWVRKDELSKGA 266

[Close]
BLAST of CsaV3_2G026030.1 vs. NCBI nr
Match: XP_022997592.1 (uncharacterized protein LOC111492480 isoform X1 [Cucurbita maxima] >XP_022997593.1 uncharacterized protein LOC111492480 isoform X1 [Cucurbita maxima] >XP_022997594.1 uncharacterized protein LOC111492480 isoform X1 [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45
Identity = 134/264 (50.76%), Postives = 158/264 (59.85%), Query Frame = 0 

Query: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60
           ME WGR  ISSQPSNY +                    +  Q        KV RTEP +K
Sbjct: 1   MEGWGRG-ISSQPSNYFS--------------------NPPQKXXXXXXXKVQRTEPAEK 60

Query: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYR----ANPRNVNKICKKILDESEPELAIPRI 120
           DD KP V+KPR  A+S SR+GS KV+ YYR    +NPRNV + CKK  D  EP   + + 
Sbjct: 61  DDLKPAVQKPRIKATSRSRSGSRKVQTYYRGEPASNPRNVKETCKKSEDGGEP--LLEKD 120

Query: 121 ERDKKXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDE 180
           E++KK             K +M +TSPTPEENLKE  RE+EC+ G   G+K V  RKIDE
Sbjct: 121 EKEKKSRRKGRKKNVRAPKEEMQRTSPTPEENLKEEMRERECKAG---GRKYVWVRKIDE 180

Query: 181 KKWTGSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNL 240
           K+ T  +  PE  GY HEMKEMENKLS ISVS EI+RG+ NGV RG SQGN      RNL
Sbjct: 181 KEGTKGQCRPE-IGYTHEMKEMENKLSGISVSSEIERGKTNGVYRGCSQGN------RNL 231

Query: 241 DRRGPRKQRDVKMIWVRKDELSKG 261
            R  PRKQR+V MIWV K+ELSKG
Sbjct: 241 QRWAPRKQRNVGMIWVMKNELSKG 231

[Close]
BLAST of CsaV3_2G026030.1 vs. NCBI nr
Match: XP_022997595.1 (uncharacterized protein LOC111492480 isoform X2 [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45
Identity = 134/264 (50.76%), Postives = 158/264 (59.85%), Query Frame = 0 

Query: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60
           ME WGR  ISSQPSNY +                    +  Q        KV RTEP +K
Sbjct: 1   MEGWGRG-ISSQPSNYFS--------------------NPPQKXXXXXXXKVQRTEPAEK 60

Query: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYR----ANPRNVNKICKKILDESEPELAIPRI 120
           DD KP V+KPR  A+S SR+GS KV+ YYR    +NPRNV + CKK  D  EP   + + 
Sbjct: 61  DDLKPAVQKPRIKATSRSRSGSRKVQTYYRGEPASNPRNVKETCKKSEDGGEP--LLEKD 120

Query: 121 ERDKKXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDE 180
           E++KK             K +M +TSPTPEENLKE  RE+EC+ G   G+K V  RKIDE
Sbjct: 121 EKEKKSRRKGRKKNVRAPKEEMQRTSPTPEENLKEEMRERECKAG---GRKYVWVRKIDE 180

Query: 181 KKWTGSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNL 240
           K+ T  +  PE  GY HEMKEMENKLS ISVS EI+RG+ NGV RG SQGN      RNL
Sbjct: 181 KEGTKGQCRPE-IGYTHEMKEMENKLSGISVSSEIERGKTNGVYRGCSQGN------RNL 231

Query: 241 DRRGPRKQRDVKMIWVRKDELSKG 261
            R  PRKQR+V MIWV K+ELSKG
Sbjct: 241 QRWAPRKQRNVGMIWVMKNELSKG 231

[Close]
BLAST of CsaV3_2G026030.1 vs. NCBI nr
Match: XP_023545894.1 (uncharacterized protein LOC111805190 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.3 bits (477), Expect = 3.2e-44
Identity = 131/264 (49.62%), Postives = 156/264 (59.09%), Query Frame = 0 

Query: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60
           ME WG  +ISSQPSNY +                    +  Q         V RTEP +K
Sbjct: 1   MEGWG-WRISSQPSNYFS--------------------NPPQXXXXXXXXXVQRTEPAEK 60

Query: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYRA----NPRNVNKICKKILDESEPELAIPRI 120
           DDQKP V+KPR  A+S SR+GS K   YYRA    NPRNV + CKK  D  EP   + + 
Sbjct: 61  DDQKPAVQKPRIKATSRSRSGSRKFETYYRAEPASNPRNVKETCKKTEDGGEP--LLEKD 120

Query: 121 ERDKKXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDE 180
           E++KK             K +M +TSPTPEENLKE  RE+EC+ G   G+K V  RK+DE
Sbjct: 121 EKEKKSRRKGRKMNVRAPKEEMQRTSPTPEENLKEEMRERECKAG---GRKYVWVRKMDE 180

Query: 181 KKWTGSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNL 240
           K+ T  +  PE  GYAHEMKEMENKLS ISVS EI+R + NGV RG +QGN      RNL
Sbjct: 181 KEGTKGQCRPE-IGYAHEMKEMENKLSGISVSSEIERAKTNGVHRGCNQGN------RNL 231

Query: 241 DRRGPRKQRDVKMIWVRKDELSKG 261
            R  PRKQR+V M+WVRK ELSKG
Sbjct: 241 QRWAPRKQRNVGMVWVRKHELSKG 231

[Close]
BLAST of CsaV3_2G026030.1 vs. TrEMBL
Match: tr|A0A0A0LNR9|A0A0A0LNR9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354630 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 6.7e-131
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 

Query: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60
           MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK
Sbjct: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60

Query: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYRANPRNVNKICKKILDESEPELAIPRIERDK 120
           DDQKPVVRKPRRNASSWSRNGSEKVRRYYRANPRNVNKICKKILDESEPELAIPRIERDK
Sbjct: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYRANPRNVNKICKKILDESEPELAIPRIERDK 120

Query: 121 KXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDEKKWT 180
           KXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDEKKWT
Sbjct: 121 KXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDEKKWT 180

Query: 181 GSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNLDRRG 240
           GSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNLDRRG
Sbjct: 181 GSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRGSSQGNRNFRDRRNLDRRG 240

Query: 241 PRKQRDVKMIWVRKDELSKGA 262
           PRKQRDVKMIWVRKDELSKGA
Sbjct: 241 PRKQRDVKMIWVRKDELSKGA 261

[Close]
BLAST of CsaV3_2G026030.1 vs. TrEMBL
Match: tr|A0A1S3BBD2|A0A1S3BBD2_CUCME (glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103487826 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 2.4e-104
Identity = 225/266 (84.59%), Postives = 235/266 (88.35%), Query Frame = 0 

Query: 1   MEEWGRSQISSQPSNYVTILDLRERWLKENERKHKEKEDLKQLELEEREQKVPRTEPDKK 60
           MEEWGR++I S+PSNYVTILDLRERWLKENER+HKEKEDLKQL       KVPRTEP+KK
Sbjct: 1   MEEWGRTRIPSRPSNYVTILDLRERWLKENEREHKEKEDLKQLXXXXXXXKVPRTEPEKK 60

Query: 61  DDQKPVVRKPRRNASSWSRNGSEKVRRYYRA----NPRNVNKICKKILDESEPELAIPRI 120
           DDQKPVVRKPRRNASSWSRNG EKVR YYRA    NP+NVN+ CKKI DE EPEL +P I
Sbjct: 61  DDQKPVVRKPRRNASSWSRNGREKVRMYYRAVPVSNPQNVNETCKKIEDEREPELPVPPI 120

Query: 121 ERDKKXXXXXXXXXXXXXKGKMDKTSPTPEENLKEGFREKECEVGVQNGKKNVRARKIDE 180
           ERDK XXXXXXXXXXXXX  KMDKTSPTPEENLKE   EKECEVGVQNGKKNVRARKIDE
Sbjct: 121 ERDKXXXXXXXXXXXXXXXXKMDKTSPTPEENLKEEVWEKECEVGVQNGKKNVRARKIDE 180

Query: 181 KKWTGSRRGPEKTGYAHEMKEMENKLSLISVSFEIKRGRNNGVDRG-SSQGNRNFRDRRN 240
           KK TGS+RGPEKTGYAHEMKEMENKLSLISVS EIKRG NNGVDRG SSQGNRNFR  RN
Sbjct: 181 KKGTGSQRGPEKTGYAHEMKEMENKLSLISVSLEIKRGTNNGVDRGSSSQGNRNFRYHRN 240

Query: 241 LDRRGPRKQRDVKMIWVRKDELSKGA 262
           LDRRGPRKQ+DVKMIWVRKDELSKGA
Sbjct: 241 LDRRGPRKQKDVKMIWVRKDELSKGA 266

The following BLAST results are available for this feature:
BLAST of CsaV3_2G026030.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011649562.11.0e-130100.00PREDICTED: uncharacterized protein DDB_G0286299-like [Cucumis sativus] >XP_01164... [more]
XP_008444535.13.6e-10484.59PREDICTED: glutamic acid-rich protein [Cucumis melo] >XP_008444536.1 PREDICTED: ... [more]
XP_022997592.12.2e-4550.76uncharacterized protein LOC111492480 isoform X1 [Cucurbita maxima] >XP_022997593... [more]
XP_022997595.12.2e-4550.76uncharacterized protein LOC111492480 isoform X2 [Cucurbita maxima][more]
XP_023545894.13.2e-4449.62uncharacterized protein LOC111805190 isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_2G026030.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G026030.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G026030.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LNR9|A0A0A0LNR9_CUCSA6.7e-131100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354630 PE=4 SV=1[more]
tr|A0A1S3BBD2|A0A1S3BBD2_CUCME2.4e-10484.59glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103487826 PE=4 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_2G026030CsaV3_2G026030gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_2G026030.1.exon3CsaV3_2G026030.1.exon3exon
CsaV3_2G026030.1.exon2CsaV3_2G026030.1.exon2exon
CsaV3_2G026030.1.exon1CsaV3_2G026030.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_2G026030.1.cds1CsaV3_2G026030.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_2G026030.1CsaV3_2G026030.1-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..247