CsaV3_2G025970 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTAAAATAAGCATTAAACAAAAGAATTCAAAACTTACTCCATTTACGAAAATATATAAAACACAAAAGATTTTTGGGTGTAAACATCTTTTTACTTTAGATACAACAAACTTTATATATATTTACACACAAAGAATAAGATTTACCATAATCAGCATTACAGGATGTGACCAATTAACATCATATCCTATTCATGCCGTTCTGTTCTCAAGTCACTCTTTGGCTCTCTTAATTATTTTTGCCAGCAACCATATTTCGTTTTCAATTGTGTGTTTAAAAGCCAAGAATTGCAATCCTTTTTCCTCCACTCTTAGTTCATAATTCCAATTCACAAAAATATGTCCAAGAATCTCGCATCCCTCACCACCACTATTGCAGCACTTGCAACAATAATGTCCCTCATCATCGTACCCTCATCAGAAGGTCGTCCCATCCCCTCATTCGAACTAATTCCAGTAAGTTTAAATTTCAAAAATCTATATTCAAAACTCATTTCTATAATTATTTCATTCTTAATTTCCATTATTACGTATTTATTTAATTAATCAGATCGTTTCTCAGGAATTCGCCACTAATCATAATAACGATGGATCATGTGAAGGATCAGGAAAAGAAGATTGCTTGATTAGAAGAACTTTACAGGCTCATACGGATTACGTTTATACTTGTGATAATCCAACCAAACCATAAACTACACTGTCGATATTTTCTTTTCTTTGATTATTACTTACACTTTCGTAATAAAAATAAAGTAATTTAATCCTTCATTCTTTTTTGCTTAATTTCTTTTTTTTCTTTTGTCGTCCATACACAAAATTAAAAGAAGATCATCATTTTTTCGTTCCAATACTTTATGAACTGATCGACGGCCAGCCGGTTGGTTTGCAGTTCCCATCGTTTCTTAAGGTTGAGTTAGGAATTGAAGCAGTTTAACGTCAATTCAATTTAGTTATTTTCGCATATATTTTCTTCTTTTTCATCCTAAATGATGCATACTTTTTATTTTAACCCTAAATCACTTTCAGTTACCCAC ATGTCCAAGAATCTCGCATCCCTCACCACCACTATTGCAGCACTTGCAACAATAATGTCCCTCATCATCGTACCCTCATCAGAAGGTCGTCCCATCCCCTCATTCGAACTAATTCCAGAATTCGCCACTAATCATAATAACGATGGATCATGTGAAGGATCAGGAAAAGAAGATTGCTTGATTAGAAGAACTTTACAGGCTCATACGGATTACGTTTATACTTGTGATAATCCAACCAAACCATAA ATGTCCAAGAATCTCGCATCCCTCACCACCACTATTGCAGCACTTGCAACAATAATGTCCCTCATCATCGTACCCTCATCAGAAGGTCGTCCCATCCCCTCATTCGAACTAATTCCAGAATTCGCCACTAATCATAATAACGATGGATCATGTGAAGGATCAGGAAAAGAAGATTGCTTGATTAGAAGAACTTTACAGGCTCATACGGATTACGTTTATACTTGTGATAATCCAACCAAACCATAA MSKNLASLTTTIAALATIMSLIIVPSSEGRPIPSFELIPEFATNHNNDGSCEGSGKEDCLIRRTLQAHTDYVYTCDNPTKP
BLAST of CsaV3_2G025970 vs. NCBI nr
Match: KGN62431.1 (hypothetical protein Csa_2G354080 [Cucumis sativus]) HSP 1 Score: 166.4 bits (420), Expect = 4.1e-38 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. NCBI nr
Match: XP_023546620.1 (phytosulfokines-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07 Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. NCBI nr
Match: XP_018857756.1 (PREDICTED: phytosulfokines-like [Juglans regia] >XP_018857972.1 PREDICTED: phytosulfokines-like [Juglans regia]) HSP 1 Score: 55.8 bits (133), Expect = 7.8e-05 Identity = 27/55 (49.09%), Postives = 32/55 (58.18%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. NCBI nr
Match: OTG31359.1 (putative phytosulfokine [Helianthus annuus]) HSP 1 Score: 55.8 bits (133), Expect = 7.8e-05 Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. NCBI nr
Match: XP_021893542.1 (phytosulfokines 3-like [Carica papaya]) HSP 1 Score: 55.8 bits (133), Expect = 7.8e-05 Identity = 28/77 (36.36%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. TAIR10
Match: AT3G49780.1 (phytosulfokine 4 precursor) HSP 1 Score: 44.3 bits (103), Expect = 4.3e-05 Identity = 24/70 (34.29%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. TAIR10
Match: AT4G37720.1 (phytosulfokine 6 precursor) HSP 1 Score: 43.9 bits (102), Expect = 5.6e-05 Identity = 17/28 (60.71%), Postives = 20/28 (71.43%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. TAIR10
Match: AT2G22860.1 (phytosulfokine 2 precursor) HSP 1 Score: 43.5 bits (101), Expect = 7.3e-05 Identity = 19/30 (63.33%), Postives = 23/30 (76.67%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. TAIR10
Match: AT1G13590.1 (phytosulfokine 1 precursor) HSP 1 Score: 43.1 bits (100), Expect = 9.5e-05 Identity = 27/82 (32.93%), Postives = 43/82 (52.44%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. TAIR10
Match: AT5G65870.1 (phytosulfokine 5 precursor) HSP 1 Score: 42.4 bits (98), Expect = 1.6e-04 Identity = 26/72 (36.11%), Postives = 38/72 (52.78%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. Swiss-Prot
Match: sp|Q9FS10|PSK_ASPOF (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.1e-05 Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. Swiss-Prot
Match: sp|Q9AR88|PSK4_ORYSJ (Phytosulfokines 4 OS=Oryza sativa subsp. japonica OX=39947 GN=PSK4 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.0e-04 Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. Swiss-Prot
Match: sp|Q9M2Y0|PSK3_ARATH (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2) HSP 1 Score: 44.3 bits (103), Expect = 7.7e-04 Identity = 24/70 (34.29%), Postives = 38/70 (54.29%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. TrEMBL
Match: tr|A0A0A0LR23|A0A0A0LR23_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354080 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 2.7e-38 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. TrEMBL
Match: tr|A0A2I4HNM3|A0A2I4HNM3_9ROSI (phytosulfokines-like OS=Juglans regia OX=51240 GN=LOC109019837 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.2e-05 Identity = 27/55 (49.09%), Postives = 32/55 (58.18%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. TrEMBL
Match: tr|A0A251V7V8|A0A251V7V8_HELAN (Putative phytosulfokine OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0074741 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.2e-05 Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. TrEMBL
Match: tr|A0A2P5G0Y4|A0A2P5G0Y4_9ROSA (Phytosulfokine OS=Trema orientalis OX=63057 GN=TorRG33x02_000220 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 8.8e-05 Identity = 34/83 (40.96%), Postives = 45/83 (54.22%), Query Frame = 0
BLAST of CsaV3_2G025970 vs. TrEMBL
Match: tr|A0A2J6K3U5|A0A2J6K3U5_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_5X117161 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 8.8e-05 Identity = 25/73 (34.25%), Postives = 43/73 (58.90%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |