CsaV3_2G017140 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G017140
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Synechocystis YCF37-like protein
Location	chr2 : 14333309 .. 14334528 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCATTACATCATCGTATTGAAAGGATTAGAAAAAGCTATGGCTTCCACAGCAATCTCTCCCGCTCTCCAAATCCTCCGACCACGATGCCGATTAAGCAACACCGTCCGCGCCGCTGCAGTGAAATCTCCGTCGGAGTCTCTCTCCGCTAGCAGAACGCGGCGACAGACACTATTGTTTCTGACGGCGACGGCGACGGCGGCGGTTGTGGGGAGAGAGAATCCGTCAATGGCGGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGAAGAAAGTGGAGGAGGAGGCGGAGGAGATCGTGAGAGAAGGATTTGAAGCGGCGGAGAAAGGACTTGAGACGGCGGAGAGAGGGATTGTGACTGCAGAGAAGGGGATTATTGCGGCGGAGAGAGAGATTGAAACGGCGGAGAAAGAAATTGAAACGGCAGTGAATTTCGGAGCGCTGTCGCAAGCCGGGGCGGTGGCCGGAGCTGAGGTCGTTGGAGTGCTCATTGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAAAGTTAAATGTGTATTTTTATGAAATTTAGTTTTTTCATTGCTTTCTTGTGATTATAAGTATTAATTAACTAAATGTTGTAATAATGTTTGGTGAATAATTATTAAATTCAGTGAAAATTTGAAGTTAATCTACCCGTTAACTTAGTAAAGCAAACATGAGAGAAAAACTGCAACAAAATGTAATTTTAGGACATTATTAATGGATCGAATTTTCATTTGGTCTTTTAAGTATCGTAATGTTACATTTTGAGATTTGTTTTCTACGTTATTTATCCATAGTTTCTAATGGTGGAATAATTTTATCGGAAGCAATCAAATGTTTGGGAGAAAATTGGTACATTCCCTTCTTATTCTTTTTAATTTTTGTTCTTAGTCCGTAAATTTATTACAGTGTGATTGACGTTCTGAATTGAATTAATTGTTTGTGTTTAACTTTCAAGTGTGATATATTTTTGTATTTGTGATGAGTTGAGTTGGTCTAAGAAGGAAGTGCTAAATTCACTTGGATTGAGTTGTGATTTATTGGGTAGTTTTTGTCTAATATAAAAACTATAATTTTTTAAAAGTTGAAGTAAGGTACTAAGAAAACCTACTCAAAAGGAACCAACTATTTGGAAGCTAGGCGGGAAGTGAAGATAAAAGAGAGGAAACAAAGAAAGTGGGAAGCAAGGAATAAG

mRNA sequence

ATGGCTTCCACAGCAATCTCTCCCGCTCTCCAAATCCTCCGACCACGATGCCGATTAAGCAACACCGTCCGCGCCGCTGCAGTGAAATCTCCGTCGGAGTCTCTCTCCGCTAGCAGAACGCGGCGACAGACACTATTGTTTCTGACGGCGACGGCGACGGCGGCGGTTGTGGGGAGAGAGAATCCGTCAATGGCGGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGAAGAAAGTGGAGGAGGAGGCGGAGGAGATCGTGAGAGAAGGATTTGAAGCGGCGGAGAAAGGACTTGAGACGGCGGAGAGAGGGATTGTGACTGCAGAGAAGGGGATTATTGCGGCGGAGAGAGAGATTGAAACGGCGGAGAAAGAAATTGAAACGGCAGTGAATTTCGGAGCGCTGTCGCAAGCCGGGGCGGTGGCCGGAGCTGAGGTCGTTGGAGTGCTCATTGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA

Coding sequence (CDS)

ATGGCTTCCACAGCAATCTCTCCCGCTCTCCAAATCCTCCGACCACGATGCCGATTAAGCAACACCGTCCGCGCCGCTGCAGTGAAATCTCCGTCGGAGTCTCTCTCCGCTAGCAGAACGCGGCGACAGACACTATTGTTTCTGACGGCGACGGCGACGGCGGCGGTTGTGGGGAGAGAGAATCCGTCAATGGCGGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGAAGAAAGTGGAGGAGGAGGCGGAGGAGATCGTGAGAGAAGGATTTGAAGCGGCGGAGAAAGGACTTGAGACGGCGGAGAGAGGGATTGTGACTGCAGAGAAGGGGATTATTGCGGCGGAGAGAGAGATTGAAACGGCGGAGAAAGAAATTGAAACGGCAGTGAATTTCGGAGCGCTGTCGCAAGCCGGGGCGGTGGCCGGAGCTGAGGTCGTTGGAGTGCTCATTGCTACGTCGATTGTTAACGGTATTTTGGGTCCTGAAGGGCAGAGTTAA

Protein sequence

MASTAISPALQILRPRCRLSNTVRAAAVKSPSESLSASRTRRQTLLFLTATATAAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIIAAEREIETAEKEIETAVNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS

Homology

[Close]

BLAST of CsaV3_2G017140 vs. NCBI nr
Match: XP_004148045.1 (PREDICTED: uncharacterized protein LOC101208092 [Cucumis sativus] >KGN62038.1 hypothetical protein Csa_2G292190 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60
           MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 168
           XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
Sbjct: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 167

[Close]

BLAST of CsaV3_2G017140 vs. NCBI nr
Match: XP_008457854.1 (PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 3.1e-32
Identity = 145/167 (86.83%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60
           MASTAISPALQILRPRCRLSNTVRAAAVK PSES                    AVVGRE
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKPPSES--LSASRTRRQTLLFLTATAAVVGRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 168
           XXXXXXXXXXX+FGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
Sbjct: 121 XXXXXXXXXXXSFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 165

[Close]

BLAST of CsaV3_2G017140 vs. NCBI nr
Match: XP_022971729.1 (uncharacterized protein LOC111470397 [Cucurbita maxima])

HSP 1 Score: 130.2 bits (326), Expect = 6.7e-27
Identity = 154/167 (92.22%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60
           MAST ISP LQIL+PRCRL+ TVRAA+VK P   XXXXXXXXXXXXXXXXXXXXAVVGRE
Sbjct: 1   MAST-ISPILQILQPRCRLNITVRAASVKPPXXXXXXXXXXXXXXXXXXXXXXXAVVGRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NPSMAE+IPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  NPSMAENIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 168
           XXXXXXXXXX NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Sbjct: 121 XXXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 166

[Close]

BLAST of CsaV3_2G017140 vs. NCBI nr
Match: XP_022928047.1 (uncharacterized protein LOC111434949 [Cucurbita moschata] >XP_023512058.1 uncharacterized protein LOC111776892 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 128.3 bits (321), Expect = 2.5e-26
Identity = 153/166 (92.17%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60
           MAST ISP LQIL+PRCRL+ TVRAA+VK P   XXXXXXXXXXXXXXXXXXXXAVVGRE
Sbjct: 1   MAST-ISPILQILQPRCRLNITVRAASVKPPXXXXXXXXXXXXXXXXXXXXXXXAVVGRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 167
           XXXXXXXXXX NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Sbjct: 121 XXXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 165

[Close]

BLAST of CsaV3_2G017140 vs. NCBI nr
Match: XP_022158696.1 (uncharacterized protein LOC111025160 [Momordica charantia])

HSP 1 Score: 124.4 bits (311), Expect = 3.7e-25
Identity = 132/167 (79.04%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60
           MAST+ SP LQILRPRCR++ TVRAA VK   ES                    A+  RE
Sbjct: 1   MASTS-SPILQILRPRCRVNTTVRAAVVKLQPES--LSAGTTRRQALLFFTATAAIAARE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 168
           XXXXXXXXXX NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPEGQS
Sbjct: 121 XXXXXXXXXXLNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQS 164

[Close]

BLAST of CsaV3_2G017140 vs. TAIR10
Match: AT2G23670.1 (homolog of Synechocystis YCF37)

HSP 1 Score: 63.2 bits (152), Expect = 1.8e-10
Identity = 93/172 (54.07%), Postives = 104/172 (60.47%), Query Frame = 0


Query: 1   MASTA----ISPALQILRPRCRLSNTV--RAAAVKSPSESXXXXXXXXXXXXXXXXXXXX 60
           MAST     +S     L+ RC  +  V  RAA    P+ S                    
Sbjct: 1   MASTVSLSLLSGGSGALQARCARTAHVSPRAAHSNKPALSSFSLTGASRRNLLFSLTAAT 60

Query: 61  AVVGRENPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            V G +  SMAE+IPLFG+RKKLKK E             XXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VVTGLQPASMAENIPLFGIRKKLKKAE-------EEAVEIXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 167
           XXXXXXXXXXXXXXXX +F  L+QAGAV  AE VGVL+ATS+VNGILGPE Q
Sbjct: 121 XXXXXXXXXXXXXXXXVSFNGLTQAGAVVAAEFVGVLVATSVVNGILGPEAQ 165

[Close]

BLAST of CsaV3_2G017140 vs. TrEMBL
Match: tr|A0A0A0LJU7|A0A0A0LJU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292190 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.5e-35
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60
           MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 168
           XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
Sbjct: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 167

[Close]

BLAST of CsaV3_2G017140 vs. TrEMBL
Match: tr|A0A1S3C6G5|A0A1S3C6G5_CUCME (uncharacterized protein LOC103497439 OS=Cucumis melo OX=3656 GN=LOC103497439 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.0e-32
Identity = 145/167 (86.83%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60
           MASTAISPALQILRPRCRLSNTVRAAAVK PSES                    AVVGRE
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKPPSES--LSASRTRRQTLLFLTATAAVVGRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 168
           XXXXXXXXXXX+FGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS
Sbjct: 121 XXXXXXXXXXXSFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 165

[Close]

BLAST of CsaV3_2G017140 vs. TrEMBL
Match: tr|A0A2N9IEZ3|A0A2N9IEZ3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50511 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.5e-11
Identity = 101/167 (60.48%), Postives = 109/167 (65.27%), Query Frame = 0


Query: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60
           MAST ISP  Q L  R     + +A A K                         A+  RE
Sbjct: 1   MASTIISPLFQTLSLRRAPPTSCKAHASKPALAPRTATVISNRRQLLFLLTASTALTSRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            PS+AEDIPLFG RKKLKK E          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LPSVAEDIPLFGFRKKLKKAE-------EEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQS 168
           XXXXXXXXXXX+FG L+QAG VAGAE VGVL+ATSIVNGILGPE Q+
Sbjct: 121 XXXXXXXXXXXSFGGLAQAGVVAGAEFVGVLVATSIVNGILGPEAQN 160

[Close]

BLAST of CsaV3_2G017140 vs. TrEMBL
Match: tr|A0A2P2P5R5|A0A2P2P5R5_RHIMU (Uncharacterized protein LOC105639624 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.4e-11
Identity = 84/111 (75.68%), Postives = 93/111 (83.78%), Query Frame = 0


Query: 56  VVGRENPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 115
           +V RE+ S+AEDIPLFGLRKKL+K E           XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 56  LVSRESASVAEDIPLFGLRKKLRKAEEAAEEIVREGFXXXXXXXXXXXXXXXXXXXXXXX 115

Query: 116 XXXXXXXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 167
           XXXXXXXXXXXXXXX +FG L+QAG V GAE+VGVL+ATS+VNGILGPEGQ
Sbjct: 116 XXXXXXXXXXXXXXXLSFGGLAQAGVVVGAELVGVLVATSVVNGILGPEGQ 166

[Close]

BLAST of CsaV3_2G017140 vs. TrEMBL
Match: tr|A0A2K1ZNN3|A0A2K1ZNN3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G034300v3 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.9e-10
Identity = 90/111 (81.08%), Postives = 98/111 (88.29%), Query Frame = 0


Query: 55  AVVGRENPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 114
           A+  RE  S+A+DIPLFGLRKKLK+ E     XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 54  ALALREPSSLAQDIPLFGLRKKLKRAEEEAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 113

Query: 115 XXXXXXXXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEG 166
           XXXXXXXXXXXXXXXX +FG L+QAGAVAGAE VGVL+AT+IVNGILGPEG
Sbjct: 114 XXXXXXXXXXXXXXXXVSFGGLAQAGAVAGAEAVGVLVATAIVNGILGPEG 164

The following BLAST results are available for this feature:

BLAST of CsaV3_2G017140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148045.1	1.1e-34	100.00	PREDICTED: uncharacterized protein LOC101208092 [Cucumis sativus] >KGN62038.1 hy...	[more]
XP_008457854.1	3.1e-32	86.83	PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo]	[more]
XP_022971729.1	6.7e-27	92.22	uncharacterized protein LOC111470397 [Cucurbita maxima]	[more]
XP_022928047.1	2.5e-26	92.17	uncharacterized protein LOC111434949 [Cucurbita moschata] >XP_023512058.1 unchar...	[more]
XP_022158696.1	3.7e-25	79.04	uncharacterized protein LOC111025160 [Momordica charantia]	[more]

BLAST of CsaV3_2G017140 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23670.1	1.8e-10	54.07	homolog of Synechocystis YCF37	[more]

BLAST of CsaV3_2G017140 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G017140 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJU7\|A0A0A0LJU7_CUCSA	7.5e-35	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292190 PE=4 SV=1	[more]
tr\|A0A1S3C6G5\|A0A1S3C6G5_CUCME	2.0e-32	86.83	uncharacterized protein LOC103497439 OS=Cucumis melo OX=3656 GN=LOC103497439 PE=...	[more]
tr\|A0A2N9IEZ3\|A0A2N9IEZ3_FAGSY	1.5e-11	60.48	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50511 PE=4 SV=1	[more]
tr\|A0A2P2P5R5\|A0A2P2P5R5_RHIMU	4.4e-11	75.68	Uncharacterized protein LOC105639624 OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|A0A2K1ZNN3\|A0A2K1ZNN3_POPTR	4.9e-10	81.08	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G034300v3 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G017140.1	CsaV3_2G017140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..133
None	No IPR available	COILS	Coil	Coil	coord: 70..90
None	No IPR available	PANTHER	PTHR36734	FAMILY NOT NAMED	coord: 9..166

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G017140	CSPI02G14590	Wild cucumber (PI 183967)	cpicucB080
CsaV3_2G017140	Cucsa.366560	Cucumber (Gy14) v1	cgycucB557
CsaV3_2G017140	CmaCh20G011410	Cucurbita maxima (Rimu)	cmacucB0652
CsaV3_2G017140	CmoCh20G011740	Cucurbita moschata (Rifu)	cmocucB0638
CsaV3_2G017140	Cp4.1LG16g00440	Cucurbita pepo (Zucchini)	cpecucB0335
CsaV3_2G017140	Carg20930	Silver-seed gourd	carcucB1036
CsaV3_2G017140	Cla020164	Watermelon (97103) v1	cucwmB153
CsaV3_2G017140	MELO3C020917	Melon (DHL92) v3.5.1	cucmeB102
CsaV3_2G017140	ClCG02G013060	Watermelon (Charleston Gray)	cucwcgB134
CsaV3_2G017140	Lsi10G005940	Bottle gourd (USVL1VR-Ls)	cuclsiB104
CsaV3_2G017140	MELO3C020917.2	Melon (DHL92) v3.6.1	cucmedB095
CsaV3_2G017140	Cla97C02G038730	Watermelon (97103) v2	cucwmbB120
CsaV3_2G017140	Bhi10G001800	Wax gourd	cucwgoB181

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G017140	Cucumber (Gy14) v2	cgybcucB068
CsaV3_2G017140	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G017140	Cucumber (Gy14) v2	cgybcucB264
CsaV3_2G017140	Cucurbita maxima (Rimu)	cmacucB0697
CsaV3_2G017140	Cucurbita maxima (Rimu)	cmacucB0777
CsaV3_2G017140	Cucurbita moschata (Rifu)	cmocucB0682
CsaV3_2G017140	Cucurbita moschata (Rifu)	cmocucB0685
CsaV3_2G017140	Cucurbita pepo (Zucchini)	cpecucB0890
CsaV3_2G017140	Melon (DHL92) v3.5.1	cucmeB156
CsaV3_2G017140	Cucumber (Chinese Long) v3	cuccucB093
CsaV3_2G017140	Silver-seed gourd	carcucB1103