Carg20930 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20930
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Synechocystis YCF37
Location	Cucurbita_argyrosperma_scaffold_141 : 591010 .. 591504 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCACAATCTCACCCATTCTCCAAATCCTCCAACCACGATGCCGATTAAACATCACCGTCCGCGCCGCCTCAGTGAAACCACCGCCGGAATCTCTCTCTGCCGCCAGAACTCGGCGACAGACACTGTTGATTCTTACGGCGACGGGGGCGGTAGTGGGGAGAGAGAATCCGTCAATGGCAGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGAAGAAGGTGGAAGAGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATCGTTACGGCGGAGAAGGGCATTATAACGGCGGAGAGAGGGATCGAAACGGCGGAGAAAGAAATCGAATCAGCGGTGAATTTCGGAGCTCTGTCGCAGGCCGGAGCGGTCGCTGGAGCTGAGGTCGTCGGAGTGCTTGTTGCTACTTCAATTGTTAATGGTATTTTGGGTCCTGAAGCGCAGAGATAA

mRNA sequence

ATGGCTTCCACAATCTCACCCATTCTCCAAATCCTCCAACCACGATGCCGATTAAACATCACCGTCCGCGCCGCCTCAGTGAAACCACCGCCGGAATCTCTCTCTGCCGCCAGAACTCGGCGACAGACACTGTTGATTCTTACGGCGACGGGGGCGGTAGTGGGGAGAGAGAATCCGTCAATGGCAGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGAAGAAGGTGGAAGAGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATCGTTACGGCGGAGAAGGGCATTATAACGGCGGAGAGAGGGATCGAAACGGCGGAGAAAGAAATCGAATCAGCGGTGAATTTCGGAGCTCTGTCGCAGGCCGGAGCGGTCGCTGGAGCTGAGGTCGTCGGAGTGCTTGTTGCTACTTCAATTGTTAATGGTATTTTGGGTCCTGAAGCGCAGAGATAA

Coding sequence (CDS)

ATGGCTTCCACAATCTCACCCATTCTCCAAATCCTCCAACCACGATGCCGATTAAACATCACCGTCCGCGCCGCCTCAGTGAAACCACCGCCGGAATCTCTCTCTGCCGCCAGAACTCGGCGACAGACACTGTTGATTCTTACGGCGACGGGGGCGGTAGTGGGGAGAGAGAATCCGTCAATGGCAGAGGACATTCCTCTGTTCGGGCTGAGGAAGAAGCTGAAGAAGGTGGAAGAGGAGGCGGAGGAGATCGTGAGGGAAGGATTCGAGGCGGCGGAGAAAGGACTTGAGACGGCGGAGCGAGGGATCGTTACGGCGGAGAAGGGCATTATAACGGCGGAGAGAGGGATCGAAACGGCGGAGAAAGAAATCGAATCAGCGGTGAATTTCGGAGCTCTGTCGCAGGCCGGAGCGGTCGCTGGAGCTGAGGTCGTCGGAGTGCTTGTTGCTACTTCAATTGTTAATGGTATTTTGGGTCCTGAAGCGCAGAGATAA

Protein sequence

MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATGAVVGRENPSMAEDIPLFGLRKKLKKVEEEAEEIVREGFEAAEKGLETAERGIVTAEKGIITAERGIETAEKEIESAVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR

Homology

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BLAST of Carg20930 vs. NCBI nr
Match: XP_008457854.1 (PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 2.4e-37
Identity = 150/164 (91.46%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 1   MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATGAVVGRENP 60
           MAST ISP LQIL+PRCRL+ TVRAA+VKPP ESLSA+RTRRQTLL LTAT AVVGRENP
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKPPSESLSASRTRRQTLLFLTATAAVVGRENP 60

Query: 61  SMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           SMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  SMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 164
           XXXXXXXX +FGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Sbjct: 121 XXXXXXXXXSFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 164

[Close]

BLAST of Carg20930 vs. NCBI nr
Match: XP_022158696.1 (uncharacterized protein LOC111025160 [Momordica charantia])

HSP 1 Score: 158.3 bits (399), Expect = 2.2e-35
Identity = 145/163 (88.96%), Postives = 149/163 (91.41%), Query Frame = 0


Query: 1   MASTISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATGAVVGRENPS 60
           MAST SPILQIL+PRCR+N TVRAA VK  PESLSA  TRRQ LL  TAT A+  RENPS
Sbjct: 1   MASTSSPILQILRPRCRVNTTVRAAVVKLQPESLSAGTTRRQALLFFTATAAIAARENPS 60

Query: 61  MAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           MAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  MAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 164
           XXXXXXX+NFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Sbjct: 121 XXXXXXXLNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ 163

[Close]

BLAST of Carg20930 vs. NCBI nr
Match: XP_022928047.1 (uncharacterized protein LOC111434949 [Cucurbita moschata] >XP_023512058.1 uncharacterized protein LOC111776892 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.1 bits (362), Expect = 4.3e-31
Identity = 143/166 (86.14%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1   MASTISPILQILQPRCRLNITVRAASVKPP--PESLSAARTRRQTLLILTATGAVVGREN 60
           MASTISPILQILQPRCRLNITVRAASVKPP                       AVVGREN
Sbjct: 1   MASTISPILQILQPRCRLNITVRAASVKPPXXXXXXXXXXXXXXXXXXXXXXXAVVGREN 60

Query: 61  PSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           PSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  PSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR 165
           XXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR
Sbjct: 121 XXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR 166

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BLAST of Carg20930 vs. NCBI nr
Match: XP_022971729.1 (uncharacterized protein LOC111470397 [Cucurbita maxima])

HSP 1 Score: 138.3 bits (347), Expect = 2.4e-29
Identity = 140/165 (84.85%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 1   MASTISPILQILQPRCRLNITVRAASVKPP--PESLSAARTRRQTLLILTATGAVVGREN 60
           MASTISPILQILQPRCRLNITVRAASVKPP                       AVVGREN
Sbjct: 1   MASTISPILQILQPRCRLNITVRAASVKPPXXXXXXXXXXXXXXXXXXXXXXXAVVGREN 60

Query: 61  PSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           PSMAE+IPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  PSMAENIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 164
           XXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPE Q
Sbjct: 121 XXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEGQ 165

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BLAST of Carg20930 vs. NCBI nr
Match: XP_004148045.1 (PREDICTED: uncharacterized protein LOC101208092 [Cucumis sativus] >KGN62038.1 hypothetical protein Csa_2G292190 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 2.1e-25
Identity = 135/166 (81.33%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 1   MAST-ISPILQILQPRCRLNITVRAASVKPPPES--LSAARTRRQTLLILTATGAVVGRE 60
           MAST ISP LQIL+PRCRL+ TVRAA+VK P ES                    AVVGRE
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 164
           XXXXXXXXXX NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Sbjct: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 166

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BLAST of Carg20930 vs. TAIR10
Match: AT2G23670.1 (homolog of Synechocystis YCF37)

HSP 1 Score: 80.9 bits (198), Expect = 8.2e-16
Identity = 106/173 (61.27%), Postives = 118/173 (68.21%), Query Frame = 0


Query: 1   MASTISPIL-----QILQPRC--RLNITVRAA-SVKPPPESLS-AARTRRQTLLILTATG 60
           MAST+S  L       LQ RC    +++ RAA S KP   S S    +RR  L  LTA  
Sbjct: 1   MASTVSLSLLSGGSGALQARCARTAHVSPRAAHSNKPALSSFSLTGASRRNLLFSLTAAT 60

Query: 61  AVVGRENPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            V G +  SMAE+IPLFG+RKKLKK E             XXXXXXXXXXXXXXXXXXXX
Sbjct: 61  VVTGLQPASMAENIPLFGIRKKLKKAE-------EEAVEIXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQR 165
           XXXXXXXXXXXXXXXXV+F  L+QAGAV  AE VGVLVATS+VNGILGPEAQ+
Sbjct: 121 XXXXXXXXXXXXXXXXVSFNGLTQAGAVVAAEFVGVLVATSVVNGILGPEAQK 166

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BLAST of Carg20930 vs. TrEMBL
Match: tr|A0A1S3C6G5|A0A1S3C6G5_CUCME (uncharacterized protein LOC103497439 OS=Cucumis melo OX=3656 GN=LOC103497439 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-37
Identity = 150/164 (91.46%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 1   MAST-ISPILQILQPRCRLNITVRAASVKPPPESLSAARTRRQTLLILTATGAVVGRENP 60
           MAST ISP LQIL+PRCRL+ TVRAA+VKPP ESLSA+RTRRQTLL LTAT AVVGRENP
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKPPSESLSASRTRRQTLLFLTATAAVVGRENP 60

Query: 61  SMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           SMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  SMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 164
           XXXXXXXX +FGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Sbjct: 121 XXXXXXXXXSFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 164

[Close]

BLAST of Carg20930 vs. TrEMBL
Match: tr|A0A0A0LJU7|A0A0A0LJU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292190 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25
Identity = 135/166 (81.33%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 1   MAST-ISPILQILQPRCRLNITVRAASVKPPPES--LSAARTRRQTLLILTATGAVVGRE 60
           MAST ISP LQIL+PRCRL+ TVRAA+VK P ES                    AVVGRE
Sbjct: 1   MASTAISPALQILRPRCRLSNTVRAAAVKSPSESXXXXXXXXXXXXXXXXXXXXAVVGRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 164
           XXXXXXXXXX NFGALSQAGAVAGAEVVGVL+ATSIVNGILGPE Q
Sbjct: 121 XXXXXXXXXXXNFGALSQAGAVAGAEVVGVLIATSIVNGILGPEGQ 166

[Close]

BLAST of Carg20930 vs. TrEMBL
Match: tr|A0A2C9URE4|A0A2C9URE4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G132100 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 9.0e-17
Identity = 114/166 (68.67%), Postives = 124/166 (74.70%), Query Frame = 0


Query: 1   MASTISPILQILQPRCRLNITVRAASVKPPPESLSAAR---TRRQTLLILTATGAVVGRE 60
           MASTISP LQ L  R       RA +  PPP      +   +RRQ L +LTA  A+  RE
Sbjct: 1   MASTISPTLQALSLR-------RACNAHPPPCKAHCPKSFASRRQLLFLLTAIPALTVRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           + S AEDIPLFGLRKKLKK E        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  SASNAEDIPLFGLRKKLKKAE-------EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 164
           XXXXXXXXXXV+FG L+QAGAVAGAEVVGVLVATS+VNGILG EA+
Sbjct: 121 XXXXXXXXXXVSFGGLAQAGAVAGAEVVGVLVATSVVNGILGSEAK 152

[Close]

BLAST of Carg20930 vs. TrEMBL
Match: tr|A0A2N9IEZ3|A0A2N9IEZ3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50511 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.6e-16
Identity = 110/166 (66.27%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 1   MAST-ISPILQILQPRCRLNITVRAASVKP--PPESLSAARTRRQTLLILTATGAVVGRE 60
           MAST ISP+ Q L  R     + +A + KP   P + +    RRQ L +LTA+ A+  RE
Sbjct: 1   MASTIISPLFQTLSLRRAPPTSCKAHASKPALAPRTATVISNRRQLLFLLTASTALTSRE 60

Query: 61  NPSMAEDIPLFGLRKKLKKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            PS+AEDIPLFG RKKLKK E          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LPSVAEDIPLFGFRKKLKKAE-------EEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXVNFGALSQAGAVAGAEVVGVLVATSIVNGILGPEAQ 164
           XXXXXXXXXX +FG L+QAG VAGAE VGVLVATSIVNGILGPEAQ
Sbjct: 121 XXXXXXXXXXXSFGGLAQAGVVAGAEFVGVLVATSIVNGILGPEAQ 159

[Close]

BLAST of Carg20930 vs. TrEMBL
Match: tr|A0A2P4KIH3|A0A2P4KIH3_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_06799 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.4e-16
Identity = 99/141 (70.21%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 24  AASVKPPPESLSAARTRRQTLLILTATGAVVGRENPSMAEDIPLFGLRKKLKKVEXXXXX 83
           A+   PPP S +    RRQ L +LTA+ A+  R  PS+AEDIPLFGLRKKLKK E     
Sbjct: 29  ASKPAPPPRSTTFLSGRRQLLFLLTASPALTARGPPSLAEDIPLFGLRKKLKKAE----- 88

Query: 84  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNFGALSQAGAVAGAE 143
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  V+FG L+QAGAVAG E
Sbjct: 89  --EEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVSFGGLAQAGAVAGVE 148

Query: 144 VVGVLVATSIVNGILGPEAQR 165
           VV +LVATSIVNGILGPEAQ+
Sbjct: 149 VVAILVATSIVNGILGPEAQK 162

The following BLAST results are available for this feature:

BLAST of Carg20930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457854.1	2.4e-37	91.46	PREDICTED: uncharacterized protein LOC103497439 [Cucumis melo]	[more]
XP_022158696.1	2.2e-35	88.96	uncharacterized protein LOC111025160 [Momordica charantia]	[more]
XP_022928047.1	4.3e-31	86.14	uncharacterized protein LOC111434949 [Cucurbita moschata] >XP_023512058.1 unchar...	[more]
XP_022971729.1	2.4e-29	84.85	uncharacterized protein LOC111470397 [Cucurbita maxima]	[more]
XP_004148045.1	2.1e-25	81.33	PREDICTED: uncharacterized protein LOC101208092 [Cucumis sativus] >KGN62038.1 hy...	[more]

BLAST of Carg20930 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23670.1	8.2e-16	61.27	homolog of Synechocystis YCF37	[more]

BLAST of Carg20930 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg20930 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C6G5\|A0A1S3C6G5_CUCME	1.6e-37	91.46	uncharacterized protein LOC103497439 OS=Cucumis melo OX=3656 GN=LOC103497439 PE=...	[more]
tr\|A0A0A0LJU7\|A0A0A0LJU7_CUCSA	1.4e-25	81.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292190 PE=4 SV=1	[more]
tr\|A0A2C9URE4\|A0A2C9URE4_MANES	9.0e-17	68.67	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G132100 PE=4 SV=...	[more]
tr\|A0A2N9IEZ3\|A0A2N9IEZ3_FAGSY	2.6e-16	66.27	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50511 PE=4 SV=1	[more]
tr\|A0A2P4KIH3\|A0A2P4KIH3_QUESU	3.4e-16	70.21	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_06799 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20930-RA	Carg20930-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..87
None	No IPR available	PANTHER	PTHR36734	FAMILY NOT NAMED	coord: 2..163

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20930	Cla020164	Watermelon (97103) v1	carwmB0993
Carg20930	Csa2G292190	Cucumber (Chinese Long) v2	carcuB1006
Carg20930	MELO3C020917	Melon (DHL92) v3.5.1	carmeB0967
Carg20930	ClCG02G013060	Watermelon (Charleston Gray)	carwcgB0967
Carg20930	CSPI02G14590	Wild cucumber (PI 183967)	carcpiB1030
Carg20930	Cucsa.366560	Cucumber (Gy14) v1	carcgyB1111
Carg20930	CmaCh20G011410	Cucurbita maxima (Rimu)	carcmaB1374
Carg20930	CmoCh20G011740	Cucurbita moschata (Rifu)	carcmoB1331
Carg20930	Cp4.1LG16g00440	Cucurbita pepo (Zucchini)	carcpeB1378
Carg20930	MELO3C020917.2	Melon (DHL92) v3.6.1	carmedB0977
Carg20930	CsaV3_2G017140	Cucumber (Chinese Long) v3	carcucB1036
Carg20930	Cla97C02G038730	Watermelon (97103) v2	carwmbB1045
Carg20930	Bhi10G001800	Wax gourd	carwgoB1163

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20930	Watermelon (97103) v2	carwmbB1047
Carg20930	Wax gourd	carwgoB1162
Carg20930	Cucumber (Gy14) v2	carcgybB0979
Carg20930	Cucurbita maxima (Rimu)	carcmaB1371