CsaV3_2G012680 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G012680
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr2 : 10210713 .. 10211860 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAAAGAAGAAGAAGAAGAATTATTATGATTTAATGATACAGATAATATTGATAAAGGAGCAAAGTTGTGTTTCCTTATTGTAAAAAGAAAAGTTTGTGTCCCGAATTGCTAACTAATTTTGACAATAACATAACTAAGCATTAATTGGTCAAAAACTTAGTTAATTGACACTTCACATAATTAATTTCAAACAATAAAATAAAGTCTCTATCGTTCATAAATATAATCAACTATTCTCTATTTCATTTTTCATTTTCCCTTTACCTATAAATTCCCTCTCTTTTCCTCTCTTTTTCAATCATCCCTTTCCTCCTCCTCCTCCCCCTCCCCCATGGCTGATTTCGCCCGACCAACCCCCGCCGATCTCCACCATCTCCGTCCACTTCCAATTCCCGGCAGTCCTCTCGTCGCCTGCCGAATCTGCGACGCTGTCTTTTCCAGTAGCCAGGCCCTAATTAACCACATCGGAGCTCACGTCTCCGACGAAGGCGCCACCTCCAGACGACCAGTACAGGATCAACAACGACGGTTTCCGGCAGGTCCGGCGTTCTTAACGGCGCCAAGAGCGACGGCGGTGTTTCTGCCAAACAGATATTCATCCCCTAATGGGATTGGGTTTGAGGGGGCGGAATCGGTTTGGGGAAATCAAATCTCTCCATTCGGAAGAAGTGTGTTTAGAGAGGGAGTGGCGGCGCCGTATCCTCCCCCGGGCTTGATGGGTCAGTACTTCACGAATTTGATTGCGATGGAGGAGGGAGGAGGGGGTGATTGTACGAAGCCTTACATAAATCAATTGGAGAAATGTTTGCCGAAAGTGGGGAACGGAGGTGAAGAAGACGACTGCCGTCAACTGTATTTAAGCAAAATAGACCTCACCTTGAAGCTGTAAAATGTACCCACACAAAGAATAACCTTTTTTATTCTTTTAAAATATATATAATATATATATATATATATGTTATATTACTTTTACCTTTTCTTTTTCTTTTTGATAGTATTTTATTTCTAATTAACTTTTTTTTCATTATTTGATTTAATTTTGATTAATTTGGAATCAATTACAATATGGATACAGCTTGTTTTCAATTTACTTCATCACATAAATGTTTGTATCACCCTTCTCCTTTAAGATTATATTTTATTG

mRNA sequence

ATGGCTGATTTCGCCCGACCAACCCCCGCCGATCTCCACCATCTCCGTCCACTTCCAATTCCCGGCAGTCCTCTCGTCGCCTGCCGAATCTGCGACGCTGTCTTTTCCAGTAGCCAGGCCCTAATTAACCACATCGGAGCTCACGTCTCCGACGAAGGCGCCACCTCCAGACGACCAGTACAGGATCAACAACGACGGTTTCCGGCAGGTCCGGCGTTCTTAACGGCGCCAAGAGCGACGGCGGTGTTTCTGCCAAACAGATATTCATCCCCTAATGGGATTGGGTTTGAGGGGGCGGAATCGGTTTGGGGAAATCAAATCTCTCCATTCGGAAGAAGTGTGTTTAGAGAGGGAGTGGCGGCGCCGTATCCTCCCCCGGGCTTGATGGGTCAGTACTTCACGAATTTGATTGCGATGGAGGAGGGAGGAGGGGGTGATTGTACGAAGCCTTACATAAATCAATTGGAGAAATGTTTGCCGAAAGTGGGGAACGGAGGTGAAGAAGACGACTGCCGTCAACTGTATTTAAGCAAAATAGACCTCACCTTGAAGCTGTAA

Coding sequence (CDS)

ATGGCTGATTTCGCCCGACCAACCCCCGCCGATCTCCACCATCTCCGTCCACTTCCAATTCCCGGCAGTCCTCTCGTCGCCTGCCGAATCTGCGACGCTGTCTTTTCCAGTAGCCAGGCCCTAATTAACCACATCGGAGCTCACGTCTCCGACGAAGGCGCCACCTCCAGACGACCAGTACAGGATCAACAACGACGGTTTCCGGCAGGTCCGGCGTTCTTAACGGCGCCAAGAGCGACGGCGGTGTTTCTGCCAAACAGATATTCATCCCCTAATGGGATTGGGTTTGAGGGGGCGGAATCGGTTTGGGGAAATCAAATCTCTCCATTCGGAAGAAGTGTGTTTAGAGAGGGAGTGGCGGCGCCGTATCCTCCCCCGGGCTTGATGGGTCAGTACTTCACGAATTTGATTGCGATGGAGGAGGGAGGAGGGGGTGATTGTACGAAGCCTTACATAAATCAATTGGAGAAATGTTTGCCGAAAGTGGGGAACGGAGGTGAAGAAGACGACTGCCGTCAACTGTATTTAAGCAAAATAGACCTCACCTTGAAGCTGTAA

Protein sequence

MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGNQISPFGRSVFREGVAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLYLSKIDLTLKL

Homology

[Close]

BLAST of CsaV3_2G012680 vs. NCBI nr
Match: KGN61591.1 (hypothetical protein Csa_2G174080 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 8.5e-92
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPV 60
           MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPV
Sbjct: 1   MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPV 60

Query: 61  QDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGNQISPFGRSVFREGVA 120
           QDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGNQISPFGRSVFREGVA
Sbjct: 61  QDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGNQISPFGRSVFREGVA 120

Query: 121 APYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGE 168
           APYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKV  G E
Sbjct: 121 APYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVKGGTE 167

[Close]

BLAST of CsaV3_2G012680 vs. NCBI nr
Match: OAY55555.1 (hypothetical protein MANES_03G163100 [Manihot esculenta])

HSP 1 Score: 80.9 bits (198), Expect = 5.1e-12
Identity = 65/180 (36.11%), Postives = 87/180 (48.33%), Query Frame = 0


Query: 24  PLVACRICDAVFSSSQALINHIGAHVSDEGATSRRP--VQDQQRRFPAGPAFLTAPRATA 83
           P +ACRIC+ VF SSQALI HI +H++DE   SRRP  +   QR   A P+   +   T 
Sbjct: 19  PPIACRICNHVFMSSQALIEHIESHMADEDPNSRRPQNLISCQRNPFANPSSQASLPPTL 78

Query: 84  VFLPNRYSSPNGIGFEGAESVWGN--------------QISPFG-RSVFREGVAAPYPPP 143
            F PN YS      F+    ++ +              QIS  G R+ +   V  P+PP 
Sbjct: 79  PFTPNSYSQ-LASNFQERNPIFSSSPQMIVSMRPTSQPQISLMGVRNSWSHQV--PFPP- 138

Query: 144 GLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLP-KVGNGGEEDDCRQLYLSKIDLTLKL 186
               Q    ++ ME+    D TKP + QLEK  P K+   G  D+     L  +DLTLKL
Sbjct: 139 ----QLQRKMMMMEDPPSCDFTKPLLQQLEKPFPYKIELKGINDNRNSSDLDMLDLTLKL 190

[Close]

BLAST of CsaV3_2G012680 vs. NCBI nr
Match: KDP40350.1 (hypothetical protein JCGZ_02348 [Jatropha curcas])

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09
Identity = 61/198 (30.81%), Postives = 87/198 (43.94%), Query Frame = 0


Query: 19  PIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRR-----PVQDQQRRFPAGPAF 78
           P    P +ACRIC+ VF S+QALI+HI +H+++E + +RR     P    Q   PAG  F
Sbjct: 12  PYNSPPQIACRICNHVFMSTQALIDHIESHMTEEDSAARRQLPLPPPPLMQPSPPAGLNF 71

Query: 79  --------------LTAPRATAVFLPNRYSSPNGIGFEGAESVWGNQISP-----FGRSV 138
                         L++P     F PN Y+ P    F+   S      S        R  
Sbjct: 72  ISCHRRANSLTQLNLSSPTHPLPFNPNAYNLP--CNFQERNSSTNPMFSATPQMFSSRPT 131

Query: 139 FREGVAAPYPPPGLMGQYFT-----NLIAMEEGGGGDCTKPYINQLEKCLPKVGN--GGE 186
           F+  +++           F+       + M E   GDCTKP++ QLEK L    N   G 
Sbjct: 132 FQSPLSSMATKNSNYTMPFSLATSKKKLTMAEQASGDCTKPFLQQLEKPLTPYKNEFKGI 191

[Close]

BLAST of CsaV3_2G012680 vs. NCBI nr
Match: XP_008224336.1 (PREDICTED: uncharacterized protein LOC103324080 [Prunus mume])

HSP 1 Score: 70.9 bits (172), Expect = 5.3e-09
Identity = 63/202 (31.19%), Postives = 88/202 (43.56%), Query Frame = 0


Query: 17  PLPIP-GSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFPAGPAFLT 76
           P  +P GS  +ACRICD VF S+QALINHI +H+ D+G T+ R  Q  Q+     P    
Sbjct: 14  PASMPSGSTEIACRICDRVFMSTQALINHIESHIVDDGLTASRLRQLTQQTNTNPPI--- 73

Query: 77  APRATAVF-LPNRYSSPNGIGFEGAESVWGNQIS-----PFGRSVFREGVAAPYPPP--- 136
             R+  VF L N ++  N         V  NQI                  +PY  P   
Sbjct: 74  --RSNPVFPLSNPFNQRNPF-----HDVHNNQIGFAPPXXXXXXXXXXXXLSPYALPRNV 133

Query: 137 ------GLMGQYF----------TNLIAMEEGGGGDCTKPYINQLEKCLP-------KVG 186
                 G++G ++            + + E+    DCT P ++QLE+ LP       ++G
Sbjct: 134 NVNVNQGVVGSHYMVMQSANETAARMASEEDNLSSDCTMPLLSQLERPLPPVNYELDRLG 193

[Close]

BLAST of CsaV3_2G012680 vs. NCBI nr
Match: ONI26710.1 (hypothetical protein PRUPE_1G040800 [Prunus persica])

HSP 1 Score: 67.8 bits (164), Expect = 4.5e-08
Identity = 63/194 (32.47%), Postives = 86/194 (44.33%), Query Frame = 0


Query: 17  PLPIP-GSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRR-----FPAG 76
           P  +P GS  +ACRICD VF S+QALINHI +H+ D+G T+ R  Q  Q+          
Sbjct: 21  PASMPSGSTEIACRICDRVFMSTQALINHIESHIVDDGLTASRLRQLTQQTNTNPPIRGN 80

Query: 77  PAF-LTAPRATAVFLPNRYSSPNGIGF-----EGAESVWGNQISPFGR------SVFREG 136
           PAF L  P        + ++  N IGF               +SP+        +V +  
Sbjct: 81  PAFPLQNPFHQXXXXXDVHN--NQIGFAPPXXXXXXXXXXXXLSPYALPRNVNVNVNQGV 140

Query: 137 VAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKV-------GNGGEEDDC 186
           V + Y       Q    + + E+    DCT P ++QLE+ LP V       GN GE    
Sbjct: 141 VGSHYMVMQSANQTAARMASEEDDLSSDCTMPLLSQLERPLPPVNYELDHRGNIGEASS- 200

[Close]

BLAST of CsaV3_2G012680 vs. TrEMBL
Match: tr|A0A0A0LNN3|A0A0A0LNN3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G174080 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.7e-92
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPV 60
           MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPV
Sbjct: 1   MADFARPTPADLHHLRPLPIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPV 60

Query: 61  QDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGNQISPFGRSVFREGVA 120
           QDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGNQISPFGRSVFREGVA
Sbjct: 61  QDQQRRFPAGPAFLTAPRATAVFLPNRYSSPNGIGFEGAESVWGNQISPFGRSVFREGVA 120

Query: 121 APYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGE 168
           APYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKV  G E
Sbjct: 121 APYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVKGGTE 167

[Close]

BLAST of CsaV3_2G012680 vs. TrEMBL
Match: tr|A0A2C9W9J2|A0A2C9W9J2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G163100 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.4e-12
Identity = 65/180 (36.11%), Postives = 87/180 (48.33%), Query Frame = 0


Query: 24  PLVACRICDAVFSSSQALINHIGAHVSDEGATSRRP--VQDQQRRFPAGPAFLTAPRATA 83
           P +ACRIC+ VF SSQALI HI +H++DE   SRRP  +   QR   A P+   +   T 
Sbjct: 19  PPIACRICNHVFMSSQALIEHIESHMADEDPNSRRPQNLISCQRNPFANPSSQASLPPTL 78

Query: 84  VFLPNRYSSPNGIGFEGAESVWGN--------------QISPFG-RSVFREGVAAPYPPP 143
            F PN YS      F+    ++ +              QIS  G R+ +   V  P+PP 
Sbjct: 79  PFTPNSYSQ-LASNFQERNPIFSSSPQMIVSMRPTSQPQISLMGVRNSWSHQV--PFPP- 138

Query: 144 GLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLP-KVGNGGEEDDCRQLYLSKIDLTLKL 186
               Q    ++ ME+    D TKP + QLEK  P K+   G  D+     L  +DLTLKL
Sbjct: 139 ----QLQRKMMMMEDPPSCDFTKPLLQQLEKPFPYKIELKGINDNRNSSDLDMLDLTLKL 190

[Close]

BLAST of CsaV3_2G012680 vs. TrEMBL
Match: tr|A0A2N9E7H8|A0A2N9E7H8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2799 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.9e-10
Identity = 62/187 (33.16%), Postives = 87/187 (46.52%), Query Frame = 0


Query: 26  VACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRRFP--------AGP-----A 85
           +ACR+CD VF S+QALINHI +H+ +E ATSR  +Q +  R P        A P     A
Sbjct: 26  IACRLCDNVFMSTQALINHIESHMGEEEATSR--MQHRTNRLPIPSQRDICANPFQPNFA 85

Query: 86  FLTAPRATAVFLPNR------YSSPNGIGFEGAESVWGNQ------ISPFGRSVFREGVA 145
               PR T     NR       + P    F G   +   +      +SP  R+ F     
Sbjct: 86  LPIPPRETQQLFENRLPVMQPLAPPERHPFYGLNRMIVPRPTLPPLVSPMARNNF----- 145

Query: 146 APYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKVGNGGEEDDCRQLY--LSK 186
              PP  ++         +EE   GDCTKPY+NQL+  + K+ +  + +D       L+K
Sbjct: 146 -AVPPQFILSAEQAQRRMVEE-PSGDCTKPYLNQLDHPIMKLVDVTDSNDDNNSISGLNK 203

[Close]

BLAST of CsaV3_2G012680 vs. TrEMBL
Match: tr|A0A067L769|A0A067L769_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02348 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 7.1e-10
Identity = 61/198 (30.81%), Postives = 87/198 (43.94%), Query Frame = 0


Query: 19  PIPGSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRR-----PVQDQQRRFPAGPAF 78
           P    P +ACRIC+ VF S+QALI+HI +H+++E + +RR     P    Q   PAG  F
Sbjct: 12  PYNSPPQIACRICNHVFMSTQALIDHIESHMTEEDSAARRQLPLPPPPLMQPSPPAGLNF 71

Query: 79  --------------LTAPRATAVFLPNRYSSPNGIGFEGAESVWGNQISP-----FGRSV 138
                         L++P     F PN Y+ P    F+   S      S        R  
Sbjct: 72  ISCHRRANSLTQLNLSSPTHPLPFNPNAYNLP--CNFQERNSSTNPMFSATPQMFSSRPT 131

Query: 139 FREGVAAPYPPPGLMGQYFT-----NLIAMEEGGGGDCTKPYINQLEKCLPKVGN--GGE 186
           F+  +++           F+       + M E   GDCTKP++ QLEK L    N   G 
Sbjct: 132 FQSPLSSMATKNSNYTMPFSLATSKKKLTMAEQASGDCTKPFLQQLEKPLTPYKNEFKGI 191

[Close]

BLAST of CsaV3_2G012680 vs. TrEMBL
Match: tr|M5XVD2|M5XVD2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G040800 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.0e-08
Identity = 63/194 (32.47%), Postives = 86/194 (44.33%), Query Frame = 0


Query: 17  PLPIP-GSPLVACRICDAVFSSSQALINHIGAHVSDEGATSRRPVQDQQRR-----FPAG 76
           P  +P GS  +ACRICD VF S+QALINHI +H+ D+G T+ R  Q  Q+          
Sbjct: 21  PASMPSGSTEIACRICDRVFMSTQALINHIESHIVDDGLTASRLRQLTQQTNTNPPIRGN 80

Query: 77  PAF-LTAPRATAVFLPNRYSSPNGIGF-----EGAESVWGNQISPFGR------SVFREG 136
           PAF L  P        + ++  N IGF               +SP+        +V +  
Sbjct: 81  PAFPLQNPFHQXXXXXDVHN--NQIGFAPPXXXXXXXXXXXXLSPYALPRNVNVNVNQGV 140

Query: 137 VAAPYPPPGLMGQYFTNLIAMEEGGGGDCTKPYINQLEKCLPKV-------GNGGEEDDC 186
           V + Y       Q    + + E+    DCT P ++QLE+ LP V       GN GE    
Sbjct: 141 VGSHYMVMQSANQTAARMASEEDDLSSDCTMPLLSQLERPLPPVNYELDHRGNIGEASS- 200

The following BLAST results are available for this feature:

BLAST of CsaV3_2G012680 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61591.1	8.5e-92	98.20	hypothetical protein Csa_2G174080 [Cucumis sativus]	[more]
OAY55555.1	5.1e-12	36.11	hypothetical protein MANES_03G163100 [Manihot esculenta]	[more]
KDP40350.1	1.1e-09	30.81	hypothetical protein JCGZ_02348 [Jatropha curcas]	[more]
XP_008224336.1	5.3e-09	31.19	PREDICTED: uncharacterized protein LOC103324080 [Prunus mume]	[more]
ONI26710.1	4.5e-08	32.47	hypothetical protein PRUPE_1G040800 [Prunus persica]	[more]

BLAST of CsaV3_2G012680 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G012680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G012680 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LNN3\|A0A0A0LNN3_CUCSA	5.7e-92	98.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G174080 PE=4 SV=1	[more]
tr\|A0A2C9W9J2\|A0A2C9W9J2_MANES	3.4e-12	36.11	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G163100 PE=4 SV=...	[more]
tr\|A0A2N9E7H8\|A0A2N9E7H8_FAGSY	1.9e-10	33.16	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2799 PE=4 SV=1	[more]
tr\|A0A067L769\|A0A067L769_JATCU	7.1e-10	30.81	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02348 PE=4 SV=1	[more]
tr\|M5XVD2\|M5XVD2_PRUPE	3.0e-08	32.47	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G040800 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013087	Znf_C2H2_type

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G012680.1	CsaV3_2G012680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 28..48
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 26..53 score: 8.954

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G012680	CSPI02G10250	Wild cucumber (PI 183967)	cpicucB080
CsaV3_2G012680	CmaCh17G001560	Cucurbita maxima (Rimu)	cmacucB0418
CsaV3_2G012680	Cp4.1LG12g01330	Cucurbita pepo (Zucchini)	cpecucB0145
CsaV3_2G012680	Cla007595	Watermelon (97103) v1	cucwmB184
CsaV3_2G012680	MELO3C023008	Melon (DHL92) v3.5.1	cucmeB143
CsaV3_2G012680	Lsi09G012260	Bottle gourd (USVL1VR-Ls)	cuclsiB098
CsaV3_2G012680	MELO3C023008.2	Melon (DHL92) v3.6.1	cucmedB136
CsaV3_2G012680	Cla97C06G116770	Watermelon (97103) v2	cucwmbB148
CsaV3_2G012680	Bhi12G001418	Wax gourd	cucwgoB129

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G012680	Cucumber (Chinese Long) v3	cuccucB067
CsaV3_2G012680	Silver-seed gourd	carcucB0258
CsaV3_2G012680	Silver-seed gourd	carcucB0265
CsaV3_2G012680	Silver-seed gourd	carcucB0786
CsaV3_2G012680	Silver-seed gourd	carcucB0814
CsaV3_2G012680	Silver-seed gourd	carcucB1001
CsaV3_2G012680	Silver-seed gourd	carcucB1123
CsaV3_2G012680	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G012680	Cucumber (Gy14) v2	cgybcucB109
CsaV3_2G012680	Cucumber (Gy14) v1	cgycucB384
CsaV3_2G012680	Cucumber (Gy14) v1	cgycucB581
CsaV3_2G012680	Cucurbita maxima (Rimu)	cmacucB0277
CsaV3_2G012680	Cucurbita maxima (Rimu)	cmacucB0611
CsaV3_2G012680	Cucurbita maxima (Rimu)	cmacucB0698
CsaV3_2G012680	Cucurbita moschata (Rifu)	cmocucB0595
CsaV3_2G012680	Cucurbita maxima (Rimu)	cmacucB0964
CsaV3_2G012680	Cucurbita maxima (Rimu)	cmacucB1043
CsaV3_2G012680	Cucurbita moschata (Rifu)	cmocucB0267
CsaV3_2G012680	Cucurbita moschata (Rifu)	cmocucB0413
CsaV3_2G012680	Cucurbita moschata (Rifu)	cmocucB0683
CsaV3_2G012680	Cucurbita moschata (Rifu)	cmocucB0952
CsaV3_2G012680	Cucurbita moschata (Rifu)	cmocucB1026
CsaV3_2G012680	Cucurbita pepo (Zucchini)	cpecucB0295
CsaV3_2G012680	Cucurbita pepo (Zucchini)	cpecucB0377
CsaV3_2G012680	Cucurbita pepo (Zucchini)	cpecucB0746
CsaV3_2G012680	Cucurbita pepo (Zucchini)	cpecucB0889
CsaV3_2G012680	Cucurbita pepo (Zucchini)	cpecucB1045
CsaV3_2G012680	Wild cucumber (PI 183967)	cpicucB134
CsaV3_2G012680	Bottle gourd (USVL1VR-Ls)	cuclsiB139
CsaV3_2G012680	Bottle gourd (USVL1VR-Ls)	cuclsiB140
CsaV3_2G012680	Melon (DHL92) v3.5.1	cucmeB128
CsaV3_2G012680	Melon (DHL92) v3.5.1	cucmeB147
CsaV3_2G012680	Melon (DHL92) v3.6.1	cucmedB122
CsaV3_2G012680	Melon (DHL92) v3.6.1	cucmedB140
CsaV3_2G012680	Watermelon (Charleston Gray)	cucwcgB148
CsaV3_2G012680	Watermelon (Charleston Gray)	cucwcgB161
CsaV3_2G012680	Watermelon (Charleston Gray)	cucwcgB168
CsaV3_2G012680	Watermelon (97103) v1	cucwmB130
CsaV3_2G012680	Watermelon (97103) v1	cucwmB136
CsaV3_2G012680	Watermelon (97103) v2	cucwmbB155
CsaV3_2G012680	Watermelon (97103) v2	cucwmbB134
CsaV3_2G012680	Wax gourd	cucwgoB150
CsaV3_2G012680	Wax gourd	cucwgoB155