CsaV3_2G010270 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G010270
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Transmembrane protein
Location	chr2 : 7053255 .. 7054298 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAATTCAAAAGCCAAAAACATAAATCACATCTTTCAAGAAACAAACAAATAAAAAGTAGCTGTTATTAACCTCATTTTATTCCAATCATTCCCATTCTAACGTCTCTCAAATTTTAAATATGAACATAGAAAAGAAAAATGACCGTTGCCCCCTAAACCTTCAAATCCCTATAAACTTCCATTTCCCCTTCTCCTTCCTTCACATCCTCAATCTCATCATCTCCATCTCTTCTTCAATCTAAAAATCCCCCAAAATTTCCTTCTCTCCCCCTCAACAAATGGGTCTTTCACCTTCATCTTCAACCTCAATTTCTAGCTCACACTACAACATCCACAAGCTCTTCCTCCTCTGTAACTACATCCTCCTCGGCGCTGCCTCCAGCTGCATTTTCCTCACCCTCTCCCTCCGTCTTCTCCCTTCCGTTTGCGGCTTCTTCATCATCTTCCTCCACGCCTTCACCATTGCCGGCGCCGTCTCTGGCTGCGCCATGGCATCCGCCTCTACCGGCCGCTGGTTCGGCGTCCACATGGTCTTCACCGTCCTTACCGCCATCTTCCAAGGCTCCGTCACCGTCCTCGTCTTCACTAGAACCGCCGACTTCCTGGGTGAATTGAAATCATATGTCCGAGAGGAAGATGGATCGGTGATTTTGAAGTTGGGCGGCGGATTGAGTGGATTGATCTTTTGTTTGGAGTGGGTTGTTCTTGTTCTTGCGTTTTGTTTGAAGTATTATATGTATGTCGAAGGGAATGGAAATGGTGAGGGTTTGAAGAGAAGTGCTAAGGTTCAGCAATTTGAAGATTCAACTTGGGCAGCACCATTTCCTGTTTAGAAACACAAATCAACACACATTTTTATTTCTCATTCTTAATTTAAACTTTGTTTGATGATTCAATTTGTGAGTCATATTCATATATGTATTCTTTCTTATTGATTTTTATATGTTTGTTAATGTATGTTTCGGAATTAAATTATGGCTTCTATATTGAAGGGGTTATTCATTCAAATAATATAATATACTATACATTACTTTTGTGTCTT

mRNA sequence

ATGGGTCTTTCACCTTCATCTTCAACCTCAATTTCTAGCTCACACTACAACATCCACAAGCTCTTCCTCCTCTGTAACTACATCCTCCTCGGCGCTGCCTCCAGCTGCATTTTCCTCACCCTCTCCCTCCGTCTTCTCCCTTCCGTTTGCGGCTTCTTCATCATCTTCCTCCACGCCTTCACCATTGCCGGCGCCGTCTCTGGCTGCGCCATGGCATCCGCCTCTACCGGCCGCTGGTTCGGCGTCCACATGGTCTTCACCGTCCTTACCGCCATCTTCCAAGGCTCCGTCACCGTCCTCGTCTTCACTAGAACCGCCGACTTCCTGGGTGAATTGAAATCATATGTCCGAGAGGAAGATGGATCGGTGATTTTGAAGTTGGGCGGCGGATTGAGTGGATTGATCTTTTGTTTGGAGTGGGTTGTTCTTGTTCTTGCGTTTTGTTTGAAGTATTATATGTATGTCGAAGGGAATGGAAATGGTGAGGGTTTGAAGAGAAGTGCTAAGGTTCAGCAATTTGAAGATTCAACTTGGGCAGCACCATTTCCTGTTTAG

Coding sequence (CDS)

ATGGGTCTTTCACCTTCATCTTCAACCTCAATTTCTAGCTCACACTACAACATCCACAAGCTCTTCCTCCTCTGTAACTACATCCTCCTCGGCGCTGCCTCCAGCTGCATTTTCCTCACCCTCTCCCTCCGTCTTCTCCCTTCCGTTTGCGGCTTCTTCATCATCTTCCTCCACGCCTTCACCATTGCCGGCGCCGTCTCTGGCTGCGCCATGGCATCCGCCTCTACCGGCCGCTGGTTCGGCGTCCACATGGTCTTCACCGTCCTTACCGCCATCTTCCAAGGCTCCGTCACCGTCCTCGTCTTCACTAGAACCGCCGACTTCCTGGGTGAATTGAAATCATATGTCCGAGAGGAAGATGGATCGGTGATTTTGAAGTTGGGCGGCGGATTGAGTGGATTGATCTTTTGTTTGGAGTGGGTTGTTCTTGTTCTTGCGTTTTGTTTGAAGTATTATATGTATGTCGAAGGGAATGGAAATGGTGAGGGTTTGAAGAGAAGTGCTAAGGTTCAGCAATTTGAAGATTCAACTTGGGCAGCACCATTTCCTGTTTAG

Protein sequence

MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAAPFPV

Homology

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BLAST of CsaV3_2G010270 vs. NCBI nr
Match: XP_004138889.1 (PREDICTED: uncharacterized protein LOC101217347 [Cucumis sativus] >KGN61330.1 hypothetical protein Csa_2G083760 [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 3.3e-96
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120
           TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120

Query: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA 180
           GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA 180

Query: 181 PFPV 185
           PFPV
Sbjct: 181 PFPV 184

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BLAST of CsaV3_2G010270 vs. NCBI nr
Match: XP_008441816.1 (PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 2.6e-93
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLSPSSSTS+S SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSVSRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAF 60

Query: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120
           TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRT DFLGELKSYVREED
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLGELKSYVREED 120

Query: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGN-GNGEGLKRSAKVQQFEDSTWA 180
           GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGN GNGEGLKRSAKVQQFEDSTWA
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGGNGEGLKRSAKVQQFEDSTWA 180

Query: 181 APFPV 185
           APFPV
Sbjct: 181 APFPV 185

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BLAST of CsaV3_2G010270 vs. NCBI nr
Match: XP_022996789.1 (uncharacterized protein LOC111491920 [Cucurbita maxima])

HSP 1 Score: 327.4 bits (838), Expect = 3.1e-86
Identity = 163/184 (88.59%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTSIS +HYNIH LFLLCNY+LLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVLTAIFQGS+TVLV+TRTA+FLGELKSYVREE 
Sbjct: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120

Query: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA 180
           G+VILKL GGLSGLIFCLEW+VLVLAFCLKYY+YVEGNG+GE LKRS KVQQFEDS WA 
Sbjct: 121 GTVILKLSGGLSGLIFCLEWIVLVLAFCLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180

Query: 181 PFPV 185
           PFPV
Sbjct: 181 PFPV 184

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BLAST of CsaV3_2G010270 vs. NCBI nr
Match: XP_022933163.1 (uncharacterized protein LOC111440012 [Cucurbita moschata])

HSP 1 Score: 325.5 bits (833), Expect = 1.2e-85
Identity = 163/184 (88.59%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTSIS +HYNIH LFLLCNY+LLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVLTAIFQGS+TVLV+TRTA+FLGELKSYVREE 
Sbjct: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLTAIFQGSLTVLVYTRTANFLGELKSYVREES 120

Query: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA 180
           G+VILKLGGGLSGLIFCLEW+VLVLAF LKYY+YVEGNG+GE LKRS KVQQFEDS WA 
Sbjct: 121 GTVILKLGGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSGEDLKRSGKVQQFEDSKWAP 180

Query: 181 PFPV 185
           PFPV
Sbjct: 181 PFPV 184

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BLAST of CsaV3_2G010270 vs. NCBI nr
Match: XP_022965972.1 (uncharacterized protein LOC111465691 [Cucurbita maxima])

HSP 1 Score: 318.2 bits (814), Expect = 1.9e-83
Identity = 170/186 (91.40%), Postives = 175/186 (94.09%), Query Frame = 0


Query: 1   MGLSPSS-STSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHA 60
           MGLSPSS S SIS SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHA
Sbjct: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREE 120
           FTIAGAVSGCAMASA+TGRWFGVHMVFTVLTAIFQGSV VL+FTRT+DFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTW- 180
           DGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVEGNG+GE  KRSAKVQQFEDS W 
Sbjct: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--KRSAKVQQFEDSKWA 180

Query: 181 AAPFPV 185
           AAPFPV
Sbjct: 181 AAPFPV 184

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BLAST of CsaV3_2G010270 vs. TAIR10
Match: AT5G16250.1 (unknown protein)

HSP 1 Score: 231.1 bits (588), Expect = 5.5e-61
Identity = 121/180 (67.22%), Postives = 141/180 (78.33%), Query Frame = 0


Query: 6   SSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGA 65
           SSS+ +  SHY+ HK+FL  NYILLGAASSCIFLTLSLRL+PS+CGF +I LHA TIA A
Sbjct: 5   SSSSPVEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTIAAA 64

Query: 66  VSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREEDGSVIL 125
           VSGCA AS    RW+  HMV TVLTAIFQGSV+VL+FT T+ FLG LKSYVREED +VIL
Sbjct: 65  VSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAAVIL 124

Query: 126 KLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFED-STWAAPFPV 185
           KLGGGL  +IFCL+W+VLV AF LKYY YV+G G+G  +KR+ KVQ  E+   W  PF V
Sbjct: 125 KLGGGLCIVIFCLDWIVLVCAFFLKYYAYVDG-GDGVAMKRTGKVQSEENPKDWPWPFQV 183

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BLAST of CsaV3_2G010270 vs. TAIR10
Match: AT3G02640.1 (unknown protein)

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-60
Identity = 119/182 (65.38%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGL P    SI  SHY  HKLFL  NY+LLGA+SSCIFLTLSLRL+PS+CGFF+I LHA 
Sbjct: 1   MGLIPQPQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHAT 60

Query: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120
           TIA AVSGCA AS    RW+  HM+ TVLTAIFQGSV+VL+FT T++FL  L SYVRE++
Sbjct: 61  TIAAAVSGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKE 120

Query: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFE---DST 180
            S+ILKL GGL  +IFCLEW+VLVLAF LKYY YV+G+ NG  +KR+ KVQ  E   +S 
Sbjct: 121 ASMILKLAGGLCVVIFCLEWIVLVLAFFLKYYAYVDGDNNGVAMKRTGKVQSEETLKNSP 180

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BLAST of CsaV3_2G010270 vs. TAIR10
Match: AT5G36800.1 (unknown protein)

HSP 1 Score: 182.2 bits (461), Expect = 2.9e-46
Identity = 100/151 (66.23%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 11  ISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAVSGCA 70
           +S S  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 71  MASASTG-----RWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREEDGSVIL 130
           + ++ST      R +G HMV TVLTAIFQG+V+VL+FTRT DFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 131 KLGGGLSGLIFCLEWVVLVLAFCLKYYMYVE 157
           KL GGL  L+FCLEW+VLVLAF LKY  Y++
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLD 153

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BLAST of CsaV3_2G010270 vs. TAIR10
Match: AT5G36710.1 (unknown protein)

HSP 1 Score: 182.2 bits (461), Expect = 2.9e-46
Identity = 100/151 (66.23%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 11  ISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAVSGCA 70
           +S S  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 71  MASASTG-----RWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREEDGSVIL 130
           + ++ST      R +G HMV TVLTAIFQG+V+VL+FTRT DFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 131 KLGGGLSGLIFCLEWVVLVLAFCLKYYMYVE 157
           KL GGL  L+FCLEW+VLVLAF LKY  Y++
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLD 153

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BLAST of CsaV3_2G010270 vs. TrEMBL
Match: tr|A0A0A0LHB3|A0A0A0LHB3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G083760 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.2e-96
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120
           TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120

Query: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA 180
           GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAA 180

Query: 181 PFPV 185
           PFPV
Sbjct: 181 PFPV 184

[Close]

BLAST of CsaV3_2G010270 vs. TrEMBL
Match: tr|A0A1S3B526|A0A1S3B526_CUCME (uncharacterized protein LOC103485869 OS=Cucumis melo OX=3656 GN=LOC103485869 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.7e-93
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLSPSSSTS+S SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSVSRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAF 60

Query: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120
           TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRT DFLGELKSYVREED
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLGELKSYVREED 120

Query: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGN-GNGEGLKRSAKVQQFEDSTWA 180
           GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGN GNGEGLKRSAKVQQFEDSTWA
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGGNGEGLKRSAKVQQFEDSTWA 180

Query: 181 APFPV 185
           APFPV
Sbjct: 181 APFPV 185

[Close]

BLAST of CsaV3_2G010270 vs. TrEMBL
Match: tr|D7ST03|D7ST03_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0499g00020 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 5.3e-66
Identity = 137/189 (72.49%), Postives = 156/189 (82.54%), Query Frame = 0


Query: 1   MGLS-PSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHA 60
           MGLS  + S+S++ SHY+ HK+FL CNYILLGAASSCIFLTLSLRLLPSVCGFF+I LH 
Sbjct: 1   MGLSIHNQSSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLHI 60

Query: 61  FTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREE 120
            TI GAVSGCA AS  T RW+  HMV TVLTAIFQGSV+VL+FTRT+DFLG+LKSYVREE
Sbjct: 61  LTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVREE 120

Query: 121 DGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNG---NGEGLKRSAKVQQFED- 180
           DG+VILKL GGLS LIFCLEWVV++LAF LKYY YVEG+G   +G  +K+SAKVQQ ED 
Sbjct: 121 DGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSAKVQQEEDL 180

Query: 181 STWAAPFPV 185
             W  PF V
Sbjct: 181 KDWPWPFQV 189

[Close]

BLAST of CsaV3_2G010270 vs. TrEMBL
Match: tr|A0A200Q3X1|A0A200Q3X1_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8895g23 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-64
Identity = 133/186 (71.51%), Postives = 155/186 (83.33%), Query Frame = 0


Query: 1   MGLS-PSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHA 60
           MGLS  + S+S++ SHY  HK+FLLCNYILLGAASSCIFLTLSLRL+PS+CGFF+I LH 
Sbjct: 1   MGLSVDNGSSSVTESHYRTHKIFLLCNYILLGAASSCIFLTLSLRLIPSLCGFFLILLHI 60

Query: 61  FTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREE 120
           FTIA A+SGCA+AS  T RW+  HMV TVLTAIFQGSV+VL+FTRT+DFLGELKSYVREE
Sbjct: 61  FTIAAAISGCAVASGKTSRWYATHMVATVLTAIFQGSVSVLIFTRTSDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFED-STW 180
           DGS+IL+L GGL+  IFCLEWVVL LAF L+YY YVEG  +G  +KRSAKVQ+ ED + W
Sbjct: 121 DGSMILRLAGGLTISIFCLEWVVLSLAFALRYYAYVEGT-DGNSMKRSAKVQEAEDMNDW 180

Query: 181 AAPFPV 185
             PF V
Sbjct: 181 PWPFQV 185

[Close]

BLAST of CsaV3_2G010270 vs. TrEMBL
Match: tr|A0A2K1YW08|A0A2K1YW08_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G179300v3 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-64
Identity = 132/183 (72.13%), Postives = 150/183 (81.97%), Query Frame = 0


Query: 6   SSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGA 65
           S+++S+S SHY+ H++FL CNYILLGAASSCIFLTLSLRL+PS+CGFF+I LH FTIAGA
Sbjct: 61  STNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILLHVFTIAGA 120

Query: 66  VSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREEDGSVIL 125
           VSGCA AS+ T RW+  HMV TVLTAIFQGSV+VL+FTRT DFLG LKSYVREEDG VIL
Sbjct: 121 VSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVREEDGDVIL 180

Query: 126 KLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEG---LKRSAKVQQFED-STWAAP 185
           KL GGL  +IFCLEWVVL LAF LKYY YVEG+ N  G   ++RSAKVQQ ED   W  P
Sbjct: 181 KLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDEDLKDWPWP 240

The following BLAST results are available for this feature:

BLAST of CsaV3_2G010270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138889.1	3.3e-96	100.00	PREDICTED: uncharacterized protein LOC101217347 [Cucumis sativus] >KGN61330.1 hy...	[more]
XP_008441816.1	2.6e-93	97.30	PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo]	[more]
XP_022996789.1	3.1e-86	88.59	uncharacterized protein LOC111491920 [Cucurbita maxima]	[more]
XP_022933163.1	1.2e-85	88.59	uncharacterized protein LOC111440012 [Cucurbita moschata]	[more]
XP_022965972.1	1.9e-83	91.40	uncharacterized protein LOC111465691 [Cucurbita maxima]	[more]

BLAST of CsaV3_2G010270 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16250.1	5.5e-61	67.22	unknown protein	[more]
AT3G02640.1	1.6e-60	65.38	unknown protein	[more]
AT5G36800.1	2.9e-46	66.23	unknown protein	[more]
AT5G36710.1	2.9e-46	66.23	unknown protein	[more]

BLAST of CsaV3_2G010270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G010270 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LHB3\|A0A0A0LHB3_CUCSA	2.2e-96	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G083760 PE=4 SV=1	[more]
tr\|A0A1S3B526\|A0A1S3B526_CUCME	1.7e-93	97.30	uncharacterized protein LOC103485869 OS=Cucumis melo OX=3656 GN=LOC103485869 PE=...	[more]
tr\|D7ST03\|D7ST03_VITVI	5.3e-66	72.49	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0499g00020 PE=4 SV=...	[more]
tr\|A0A200Q3X1\|A0A200Q3X1_9MAGN	1.3e-64	71.51	Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8895g23 PE=4 SV=1	[more]
tr\|A0A2K1YW08\|A0A2K1YW08_POPTR	1.3e-64	72.13	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G179300v3 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G010270.1	CsaV3_2G010270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34124	FAMILY NOT NAMED	coord: 6..182
None	No IPR available	PANTHER	PTHR34124:SF2	F16B3.27 PROTEIN	coord: 6..182

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G010270	CSPI02G07850	Wild cucumber (PI 183967)	cpicucB080
CsaV3_2G010270	Cucsa.277650	Cucumber (Gy14) v1	cgycucB426
CsaV3_2G010270	CmaCh05G007820	Cucurbita maxima (Rimu)	cmacucB0928
CsaV3_2G010270	CmaCh12G009900	Cucurbita maxima (Rimu)	cmacucB0193
CsaV3_2G010270	CmoCh12G010000	Cucurbita moschata (Rifu)	cmocucB0177
CsaV3_2G010270	CmoCh05G008280	Cucurbita moschata (Rifu)	cmocucB0926
CsaV3_2G010270	Cp4.1LG00g02840	Cucurbita pepo (Zucchini)	cpecucB0008
CsaV3_2G010270	CsGy2G008110	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G010270	Carg23472	Silver-seed gourd	carcucB0519
CsaV3_2G010270	MELO3C008682	Melon (DHL92) v3.5.1	cucmeB138
CsaV3_2G010270	ClCG11G010020	Watermelon (Charleston Gray)	cucwcgB119
CsaV3_2G010270	Lsi11G009250	Bottle gourd (USVL1VR-Ls)	cuclsiB108
CsaV3_2G010270	MELO3C008682.2	Melon (DHL92) v3.6.1	cucmedB131
CsaV3_2G010270	Cla97C11G216310	Watermelon (97103) v2	cucwmbB114

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G010270	Cucurbita moschata (Rifu)	cmocucB0920
CsaV3_2G010270	Cucurbita pepo (Zucchini)	cpecucB1005
CsaV3_2G010270	Melon (DHL92) v3.5.1	cucmeB141
CsaV3_2G010270	Melon (DHL92) v3.5.1	cucmeB144
CsaV3_2G010270	Melon (DHL92) v3.6.1	cucmedB134
CsaV3_2G010270	Melon (DHL92) v3.6.1	cucmedB137
CsaV3_2G010270	Wax gourd	cucwgoB146