Cp4.1LG00g02840 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g02840
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	JHL23J11.5 protein
Location	Cp4.1LG00 : 8752051 .. 8752608 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCTTTCAACTTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCACCAGCTGCATTTTCCTAACCCTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACCGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCGCCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACTGTGATTCTGAAATTGAGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTAGAGAGGATCTGAAGATTCCAAATGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGTTTAG

mRNA sequence

ATGGGCCTTTCAACTTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCACCAGCTGCATTTTCCTAACCCTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACCGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCGCCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACTGTGATTCTGAAATTGAGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTAGAGAGGATCTGAAGATTCCAAATGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGTTTAG

Coding sequence (CDS)

ATGGGCCTTTCAACTTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCACCAGCTGCATTTTCCTAACCCTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACCGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCGCCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACTGTGATTCTGAAATTGAGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTAGAGAGGATCTGAAGATTCCAAATGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGTTTAG

Protein sequence

MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREESGTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSREDLKIPNGKVQQFEDSKWAPPFPV

Homology

[Close]

BLAST of Cp4.1LG00g02840 vs. TrEMBL
Match: A0A0A0LHB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G083760 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 2.7e-80
Identity = 157/185 (84.86%), Postives = 171/185 (92.43%), Query Frame = 1


Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTSIS +HYNIH LFLLCNY+LLGAA+SCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVL AIFQGS+TVLV+TRTA+FLGELKSYVREE 
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120

Query: 121 GTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSREDLKIPNGKVQQFEDSKWA 180
           G+VILKL GGLSGLIFCLEW+VLVLAF LKYY+YVEGNG+ E LK  + KVQQFEDS WA
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLK-RSAKVQQFEDSTWA 180

Query: 181 PPFPV 186
            PFPV
Sbjct: 181 APFPV 184

[Close]

BLAST of Cp4.1LG00g02840 vs. TrEMBL
Match: D7ST03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.5e-59
Identity = 125/189 (66.14%), Postives = 150/189 (79.37%), Query Frame = 1


Query: 1   MGLST-SSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHA 60
           MGLS  + S+S++ +HY+ H +FL CNY+LLGAA+SCIFLTLSLRLLPSVCGFF+I LH 
Sbjct: 1   MGLSIHNQSSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLHI 60

Query: 61  FTIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREE 120
            TI GA+SGCA AS  T RWY  HMV TVL AIFQGS++VL++TRT++FLG+LKSYVREE
Sbjct: 61  LTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVREE 120

Query: 121 SGTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGN--GSREDLKIPNGKVQQFEDS 180
            G VILKL+GGLS LIFCLEW+V++LAF+LKYY YVEG+  GS       + KVQQ ED 
Sbjct: 121 DGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSAKVQQEEDL 180

Query: 181 K-WAPPFPV 186
           K W  PF V
Sbjct: 181 KDWPWPFQV 189

[Close]

BLAST of Cp4.1LG00g02840 vs. TrEMBL
Match: B9HYG6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2)

HSP 1 Score: 233.4 bits (594), Expect = 2.2e-58
Identity = 120/183 (65.57%), Postives = 146/183 (79.78%), Query Frame = 1


Query: 6   SSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGA 65
           S+++S+S++HY+ H +FL CNY+LLGAA+SCIFLTLSLRL+PS+CGFF+I LH FTIAGA
Sbjct: 106 STNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILLHVFTIAGA 165

Query: 66  ISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 125
           +SGCA AS+ T RWY  HMV TVL AIFQGS++VL++TRT +FLG LKSYVREE G VIL
Sbjct: 166 VSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVREEDGDVIL 225

Query: 126 KLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEG--NGSREDLKIPNGKVQQFEDSK-WAPP 185
           KL+GGL  +IFCLEW+VL LAF+LKYY YVEG  N   +     + KVQQ ED K W  P
Sbjct: 226 KLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDEDLKDWPWP 285

[Close]

BLAST of Cp4.1LG00g02840 vs. TrEMBL
Match: G7KSF0_MEDTR (Adenosylhomocysteinase, putative OS=Medicago truncatula GN=MTR_7g080550 PE=2 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 4.9e-58
Identity = 126/187 (67.38%), Postives = 148/187 (79.14%), Query Frame = 1


Query: 1   MGLSTSSS-TSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHA 60
           MGLS ++   +I+  HYNIH LFL CNYVLLGAA+SCIFLTLSLRL+PSVCGFF+I LH 
Sbjct: 1   MGLSMNNPPATITPRHYNIHKLFLFCNYVLLGAASSCIFLTLSLRLVPSVCGFFLILLHI 60

Query: 61  FTIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREE 120
           FTIAGA+SGCA   A   RWY  HMV TVL AIFQGS++VLV+TRT++FLGEL+SYVREE
Sbjct: 61  FTIAGAVSGCAAVGA--NRWYSAHMVATVLTAIFQGSVSVLVFTRTSDFLGELQSYVREE 120

Query: 121 SGTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSREDLKIPNGKVQQFEDSK- 180
            G+VILKLSGGL+ LIFCLEW+VL LAF+LKYY  VEG  +   + + + KVQQ ED K 
Sbjct: 121 DGSVILKLSGGLAILIFCLEWVVLTLAFFLKYYACVEGGNTCRTVVLGSAKVQQDEDLKD 180

Query: 181 WAPPFPV 186
           W  PF V
Sbjct: 181 WPWPFQV 185

[Close]

BLAST of Cp4.1LG00g02840 vs. TrEMBL
Match: B7FNF9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 6.4e-58
Identity = 126/187 (67.38%), Postives = 147/187 (78.61%), Query Frame = 1


Query: 1   MGLSTSSS-TSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHA 60
           MGLS +    +I+  HYNIH LFL CNYVLLGAA+SCIFLTLSLRL+PSVCGFF+I LH 
Sbjct: 1   MGLSMNDPPATITPRHYNIHKLFLFCNYVLLGAASSCIFLTLSLRLVPSVCGFFLILLHI 60

Query: 61  FTIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREE 120
           FTIAGA+SGCA   A   RWY  HMV TVL AIFQGS++VLV+TRT++FLGEL+SYVREE
Sbjct: 61  FTIAGAVSGCAAVGA--NRWYSAHMVATVLTAIFQGSVSVLVFTRTSDFLGELQSYVREE 120

Query: 121 SGTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSREDLKIPNGKVQQFEDSK- 180
            G+VILKLSGGL+ LIFCLEW+VL LAF+LKYY  VEG  +   + + + KVQQ ED K 
Sbjct: 121 DGSVILKLSGGLAILIFCLEWVVLTLAFFLKYYACVEGGNTCRTVVLGSAKVQQDEDLKD 180

Query: 181 WAPPFPV 186
           W  PF V
Sbjct: 181 WPWPFQV 185

[Close]

BLAST of Cp4.1LG00g02840 vs. TAIR10
Match: AT5G16250.1 (AT5G16250.1 unknown protein)

HSP 1 Score: 210.3 bits (534), Expect = 1.0e-54
Identity = 113/181 (62.43%), Postives = 135/181 (74.59%), Query Frame = 1


Query: 6   SSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGA 65
           SSS+ +  +HY+ H +FL  NY+LLGAA+SCIFLTLSLRL+PS+CGF +I LHA TIA A
Sbjct: 5   SSSSPVEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTIAAA 64

Query: 66  ISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 125
           +SGCA AS    RWY  HMV TVL AIFQGS++VL++T T+ FLG LKSYVREE   VIL
Sbjct: 65  VSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAAVIL 124

Query: 126 KLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSREDLKIPNGKVQQFEDSK-WAPPFP 185
           KL GGL  +IFCL+WIVLV AF+LKYY YV+G G    +K   GKVQ  E+ K W  PF 
Sbjct: 125 KLGGGLCIVIFCLDWIVLVCAFFLKYYAYVDG-GDGVAMK-RTGKVQSEENPKDWPWPFQ 183

[Close]

BLAST of Cp4.1LG00g02840 vs. TAIR10
Match: AT3G02640.1 (AT3G02640.1 unknown protein)

HSP 1 Score: 209.1 bits (531), Expect = 2.3e-54
Identity = 111/181 (61.33%), Postives = 135/181 (74.59%), Query Frame = 1


Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGL      SI  +HY  H LFL  NYVLLGA++SCIFLTLSLRL+PS+CGFF+I LHA 
Sbjct: 1   MGLIPQPQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHAT 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIA A+SGCA AS    RWY  HM+ TVL AIFQGS++VL++T T+NFL  L SYVRE+ 
Sbjct: 61  TIAAAVSGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKE 120

Query: 121 GTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSREDLKIPNGKVQQFEDSKWA 180
            ++ILKL+GGL  +IFCLEWIVLVLAF+LKYY YV+G+ +   +K   GKVQ  E  K +
Sbjct: 121 ASMILKLAGGLCVVIFCLEWIVLVLAFFLKYYAYVDGDNNGVAMK-RTGKVQSEETLKNS 180

Query: 181 P 182
           P
Sbjct: 181 P 180

[Close]

BLAST of Cp4.1LG00g02840 vs. TAIR10
Match: AT5G36800.1 (AT5G36800.1 unknown protein)

HSP 1 Score: 177.9 bits (450), Expect = 5.6e-45
Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 1


Query: 11  ISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCA 70
           +S++  N HN+FLLCNY+LLG+A+SCIFLT+SLRL PS+ G  +IFL+  TIA A+SGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 71  MASAATG-----RWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 130
           + +++T      R YG HMV TVL AIFQG+++VL++TRT +FL  LKSYVREE G VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 131 KLSGGLSGLIFCLEWIVLVLAFWLKYYLYV-EGNGSREDLKIPNGKVQQFEDSKWAPPFP 185
           KLSGGL  L+FCLEWIVLVLAF LKY  Y+ E     +D K+     +Q ED K  P +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVR----RQEEDLKDWPSYP 178

[Close]

BLAST of Cp4.1LG00g02840 vs. TAIR10
Match: AT5G36710.1 (AT5G36710.1 unknown protein)

HSP 1 Score: 177.9 bits (450), Expect = 5.6e-45
Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 1


Query: 11  ISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCA 70
           +S++  N HN+FLLCNY+LLG+A+SCIFLT+SLRL PS+ G  +IFL+  TIA A+SGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 71  MASAATG-----RWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 130
           + +++T      R YG HMV TVL AIFQG+++VL++TRT +FL  LKSYVREE G VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 131 KLSGGLSGLIFCLEWIVLVLAFWLKYYLYV-EGNGSREDLKIPNGKVQQFEDSKWAPPFP 185
           KLSGGL  L+FCLEWIVLVLAF LKY  Y+ E     +D K+     +Q ED K  P +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVR----RQEEDLKDWPSYP 178

[Close]

BLAST of Cp4.1LG00g02840 vs. NCBI nr
Match: gi|449442239|ref|XP_004138889.1| (PREDICTED: uncharacterized protein LOC101217347 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 3.8e-80
Identity = 157/185 (84.86%), Postives = 171/185 (92.43%), Query Frame = 1


Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTSIS +HYNIH LFLLCNY+LLGAA+SCIFLTLSLRLLPSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVL AIFQGS+TVLV+TRTA+FLGELKSYVREE 
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREED 120

Query: 121 GTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSREDLKIPNGKVQQFEDSKWA 180
           G+VILKL GGLSGLIFCLEW+VLVLAF LKYY+YVEGNG+ E LK  + KVQQFEDS WA
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLK-RSAKVQQFEDSTWA 180

Query: 181 PPFPV 186
            PFPV
Sbjct: 181 APFPV 184

[Close]

BLAST of Cp4.1LG00g02840 vs. NCBI nr
Match: gi|659082394|ref|XP_008441816.1| (PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo])

HSP 1 Score: 302.0 bits (772), Expect = 7.2e-79
Identity = 152/185 (82.16%), Postives = 168/185 (90.81%), Query Frame = 1


Query: 1   MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAF 60
           MGLS SSSTS+SR+HYNIH LFLLCNY+LLGAA+SCIFLTLSLRL+PSVCGFFIIFLHAF
Sbjct: 1   MGLSPSSSTSVSRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHAF 60

Query: 61  TIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREES 120
           TIAGA+SGCAMASA+TGRW+GVHMVFTVL AIFQGS+TVLV+TRT +FLGELKSYVREE 
Sbjct: 61  TIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLGELKSYVREED 120

Query: 121 GTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSREDLKIPNGKVQQFEDSKWA 180
           G+VILKL GGLSGLIFCLEW+VLVLAF LKYY+YVEGNG   +    + KVQQFEDS WA
Sbjct: 121 GSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGGNGEGLKRSAKVQQFEDSTWA 180

Query: 181 PPFPV 186
            PFPV
Sbjct: 181 APFPV 185

[Close]

BLAST of Cp4.1LG00g02840 vs. NCBI nr
Match: gi|225467749|ref|XP_002265070.1| (PREDICTED: uncharacterized protein LOC100267455 [Vitis vinifera])

HSP 1 Score: 237.3 bits (604), Expect = 2.2e-59
Identity = 125/189 (66.14%), Postives = 150/189 (79.37%), Query Frame = 1


Query: 1   MGLST-SSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHA 60
           MGLS  + S+S++ +HY+ H +FL CNY+LLGAA+SCIFLTLSLRLLPSVCGFF+I LH 
Sbjct: 1   MGLSIHNQSSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLHI 60

Query: 61  FTIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREE 120
            TI GA+SGCA AS  T RWY  HMV TVL AIFQGS++VL++TRT++FLG+LKSYVREE
Sbjct: 61  LTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVREE 120

Query: 121 SGTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGN--GSREDLKIPNGKVQQFEDS 180
            G VILKL+GGLS LIFCLEW+V++LAF+LKYY YVEG+  GS       + KVQQ ED 
Sbjct: 121 DGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSAKVQQEEDL 180

Query: 181 K-WAPPFPV 186
           K W  PF V
Sbjct: 181 KDWPWPFQV 189

[Close]

BLAST of Cp4.1LG00g02840 vs. NCBI nr
Match: gi|470132643|ref|XP_004302188.1| (PREDICTED: uncharacterized protein LOC101296972 [Fragaria vesca subsp. vesca])

HSP 1 Score: 236.5 bits (602), Expect = 3.7e-59
Identity = 127/193 (65.80%), Postives = 149/193 (77.20%), Query Frame = 1


Query: 1   MGLSTSSSTSISRA---HYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFL 60
           MG+  +S+ S++ A   HY+ H +FLLCNY+LLGAA+SCIFLTLSLRLLPSVCGFF+I L
Sbjct: 1   MGIGLNSNPSVAGASPSHYHTHKVFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFVILL 60

Query: 61  HAFTIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVR 120
           H FTI GA+SGCA ASA TG+WYG HMV TVL AIFQGS+ VL++TRT +FLGELKSYVR
Sbjct: 61  HFFTIVGAVSGCAAASAGTGKWYGAHMVATVLTAIFQGSVAVLIFTRTGDFLGELKSYVR 120

Query: 121 EESGTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGN----GSREDLKIPNGKVQQ 180
           EE  +VILKL GGLS LIFCLEW+VL LAF+LKYY  VEG+    G      + + KVQQ
Sbjct: 121 EEDASVILKLGGGLSILIFCLEWVVLTLAFFLKYYASVEGDHIQLGGNSRAAMRSSKVQQ 180

Query: 181 FEDSK-WAPPFPV 186
            ED K W  PF V
Sbjct: 181 EEDLKDWPWPFQV 193

[Close]

BLAST of Cp4.1LG00g02840 vs. NCBI nr
Match: gi|566191522|ref|XP_002315113.2| (hypothetical protein POPTR_0010s18640g [Populus trichocarpa])

HSP 1 Score: 233.4 bits (594), Expect = 3.2e-58
Identity = 120/183 (65.57%), Postives = 146/183 (79.78%), Query Frame = 1


Query: 6   SSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGA 65
           S+++S+S++HY+ H +FL CNY+LLGAA+SCIFLTLSLRL+PS+CGFF+I LH FTIAGA
Sbjct: 106 STNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILLHVFTIAGA 165

Query: 66  ISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREESGTVIL 125
           +SGCA AS+ T RWY  HMV TVL AIFQGS++VL++TRT +FLG LKSYVREE G VIL
Sbjct: 166 VSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVREEDGDVIL 225

Query: 126 KLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEG--NGSREDLKIPNGKVQQFEDSK-WAPP 185
           KL+GGL  +IFCLEW+VL LAF+LKYY YVEG  N   +     + KVQQ ED K W  P
Sbjct: 226 KLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDEDLKDWPWP 285

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g02840 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG00g02840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHB3_CUCSA	2.7e-80	84.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G083760 PE=4 SV=1	[more]
D7ST03_VITVI	1.5e-59	66.14	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=...	[more]
B9HYG6_POPTR	2.2e-58	65.57	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2	[more]
G7KSF0_MEDTR	4.9e-58	67.38	Adenosylhomocysteinase, putative OS=Medicago truncatula GN=MTR_7g080550 PE=2 SV=...	[more]
B7FNF9_MEDTR	6.4e-58	67.38	Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]

BLAST of Cp4.1LG00g02840 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16250.1	1.0e-54	62.43	unknown protein	[more]
AT3G02640.1	2.3e-54	61.33	unknown protein	[more]
AT5G36800.1	5.6e-45	57.22	unknown protein	[more]
AT5G36710.1	5.6e-45	57.22	unknown protein	[more]

BLAST of Cp4.1LG00g02840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442239\|ref\|XP_004138889.1\|	3.8e-80	84.86	PREDICTED: uncharacterized protein LOC101217347 [Cucumis sativus]	[more]
gi\|659082394\|ref\|XP_008441816.1\|	7.2e-79	82.16	PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo]	[more]
gi\|225467749\|ref\|XP_002265070.1\|	2.2e-59	66.14	PREDICTED: uncharacterized protein LOC100267455 [Vitis vinifera]	[more]
gi\|470132643\|ref\|XP_004302188.1\|	3.7e-59	65.80	PREDICTED: uncharacterized protein LOC101296972 [Fragaria vesca subsp. vesca]	[more]
gi\|566191522\|ref\|XP_002315113.2\|	3.2e-58	65.57	hypothetical protein POPTR_0010s18640g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g02840.1	Cp4.1LG00g02840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34124	FAMILY NOT NAMED	coord: 1..185 score: 8.8
None	No IPR available	PANTHER	PTHR34124:SF2	F16B3.27 PROTEIN	coord: 1..185 score: 8.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG00g02840	Lsi11G009250	Bottle gourd (USVL1VR-Ls)	cpelsiB006
Cp4.1LG00g02840	CsaV3_2G010270	Cucumber (Chinese Long) v3	cpecucB0008
Cp4.1LG00g02840	CsGy2G008110	Cucumber (Gy14) v2	cgybcpeB153

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g02840	Wax gourd	cpewgoB0009