Cp4.1LG00g02840.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCTTTCAACTTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCACCAGCTGCATTTTCCTAACCCTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACCGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCGCCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACTGTGATTCTGAAATTGAGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTAGAGAGGATCTGAAGATTCCAAATGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGTTTAG ATGGGCCTTTCAACTTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCACCAGCTGCATTTTCCTAACCCTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACCGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCGCCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACTGTGATTCTGAAATTGAGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTAGAGAGGATCTGAAGATTCCAAATGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGTTTAG ATGGGCCTTTCAACTTCTTCTTCAACCTCAATTTCTAGGGCTCACTACAACATCCACAATCTCTTCCTCCTCTGCAACTACGTCCTCCTCGGCGCCGCCACCAGCTGCATTTTCCTAACCCTATCCCTCCGCCTCCTCCCTTCCGTTTGCGGTTTCTTCATCATCTTCCTCCACGCATTCACCATCGCCGGCGCTATCTCCGGCTGCGCCATGGCCTCTGCCGCCACCGGCCGCTGGTACGGCGTCCACATGGTCTTCACCGTCCTCGCCGCCATCTTCCAAGGCTCCCTCACGGTCCTGGTCTACACCAGAACAGCCAACTTCCTTGGCGAACTGAAATCGTACGTCCGGGAGGAAAGCGGAACTGTGATTCTGAAATTGAGCGGCGGATTGAGCGGCTTGATCTTCTGTCTGGAGTGGATCGTCCTGGTTCTTGCGTTTTGGTTGAAATACTATTTGTATGTTGAAGGAAATGGAAGTAGAGAGGATCTGAAGATTCCAAATGGGAAGGTTCAGCAGTTTGAAGATTCCAAATGGGCGCCGCCTTTCCCTGTTTAG MGLSTSSSTSISRAHYNIHNLFLLCNYVLLGAATSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAISGCAMASAATGRWYGVHMVFTVLAAIFQGSLTVLVYTRTANFLGELKSYVREESGTVILKLSGGLSGLIFCLEWIVLVLAFWLKYYLYVEGNGSREDLKIPNGKVQQFEDSKWAPPFPV
BLAST of Cp4.1LG00g02840.1 vs. TrEMBL
Match: A0A0A0LHB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G083760 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 2.7e-80 Identity = 157/185 (84.86%), Postives = 171/185 (92.43%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. TrEMBL
Match: D7ST03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.5e-59 Identity = 125/189 (66.14%), Postives = 150/189 (79.37%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. TrEMBL
Match: B9HYG6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2) HSP 1 Score: 233.4 bits (594), Expect = 2.2e-58 Identity = 120/183 (65.57%), Postives = 146/183 (79.78%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. TrEMBL
Match: G7KSF0_MEDTR (Adenosylhomocysteinase, putative OS=Medicago truncatula GN=MTR_7g080550 PE=2 SV=2) HSP 1 Score: 232.3 bits (591), Expect = 4.9e-58 Identity = 126/187 (67.38%), Postives = 148/187 (79.14%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. TrEMBL
Match: B7FNF9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 6.4e-58 Identity = 126/187 (67.38%), Postives = 147/187 (78.61%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. TAIR10
Match: AT5G16250.1 (AT5G16250.1 unknown protein) HSP 1 Score: 210.3 bits (534), Expect = 1.0e-54 Identity = 113/181 (62.43%), Postives = 135/181 (74.59%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. TAIR10
Match: AT3G02640.1 (AT3G02640.1 unknown protein) HSP 1 Score: 209.1 bits (531), Expect = 2.3e-54 Identity = 111/181 (61.33%), Postives = 135/181 (74.59%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. TAIR10
Match: AT5G36800.1 (AT5G36800.1 unknown protein) HSP 1 Score: 177.9 bits (450), Expect = 5.6e-45 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. TAIR10
Match: AT5G36710.1 (AT5G36710.1 unknown protein) HSP 1 Score: 177.9 bits (450), Expect = 5.6e-45 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. NCBI nr
Match: gi|449442239|ref|XP_004138889.1| (PREDICTED: uncharacterized protein LOC101217347 [Cucumis sativus]) HSP 1 Score: 306.2 bits (783), Expect = 3.8e-80 Identity = 157/185 (84.86%), Postives = 171/185 (92.43%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. NCBI nr
Match: gi|659082394|ref|XP_008441816.1| (PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo]) HSP 1 Score: 302.0 bits (772), Expect = 7.2e-79 Identity = 152/185 (82.16%), Postives = 168/185 (90.81%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. NCBI nr
Match: gi|225467749|ref|XP_002265070.1| (PREDICTED: uncharacterized protein LOC100267455 [Vitis vinifera]) HSP 1 Score: 237.3 bits (604), Expect = 2.2e-59 Identity = 125/189 (66.14%), Postives = 150/189 (79.37%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. NCBI nr
Match: gi|470132643|ref|XP_004302188.1| (PREDICTED: uncharacterized protein LOC101296972 [Fragaria vesca subsp. vesca]) HSP 1 Score: 236.5 bits (602), Expect = 3.7e-59 Identity = 127/193 (65.80%), Postives = 149/193 (77.20%), Query Frame = 1
BLAST of Cp4.1LG00g02840.1 vs. NCBI nr
Match: gi|566191522|ref|XP_002315113.2| (hypothetical protein POPTR_0010s18640g [Populus trichocarpa]) HSP 1 Score: 233.4 bits (594), Expect = 3.2e-58 Identity = 120/183 (65.57%), Postives = 146/183 (79.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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