CmoCh12G010000 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G010000
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(AT5g16250/T21H19_170) (At5g16250/T21H19_170)
Location	Cmo_Chr12 : 9335560 .. 9336114 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTCTCACCATCTTCACCATCACCCTCAATTTCCAGGTCACATTACAACATCCACAAGCTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCTCCTGCATTTTCCTAACTCTATCACTCCGCCTCATCCCCTCCGTATGCGGCTTCTTCATAATCTTCCTACACGCATTCACAATCGCCGGCGCTGTCTCCGGCTGCGCCATGGCTGCCGCCGCAACCGGGCGCTGGTTCGGCGTCCATATGGTCTTCACCGTCCTGACCGCCATATTTCAAGGCTCTGTTGCGGTTCTGATTTTCACCAGAACTAGCGATTTCCTTGGGGAACTGAAATCGTACGTCCGGGAGGAAGATGGGTCGGTGATTTTGAAATTGGGCGGCGGATTGAGCTGCTTGATCTTCGGTTTGGAGTGGGTTGTGCTGGTTTTGGCGTTCTGTTTGAAGTATTACTTTTATGTTGAGGGAAATGGAAGTGGTGAGCAGAGAAGTGCTAAGGTTCAACAGTTTGAAGATTCGAAGTGGGCGGCGGCGCCATTCCCAGTTTGA

mRNA sequence

ATGGGTCTCTCACCATCTTCACCATCACCCTCAATTTCCAGGTCACATTACAACATCCACAAGCTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCTCCTGCATTTTCCTAACTCTATCACTCCGCCTCATCCCCTCCGTATGCGGCTTCTTCATAATCTTCCTACACGCATTCACAATCGCCGGCGCTGTCTCCGGCTGCGCCATGGCTGCCGCCGCAACCGGGCGCTGGTTCGGCGTCCATATGGTCTTCACCGTCCTGACCGCCATATTTCAAGGCTCTGTTGCGGTTCTGATTTTCACCAGAACTAGCGATTTCCTTGGGGAACTGAAATCGTACGTCCGGGAGGAAGATGGGTCGGTGATTTTGAAATTGGGCGGCGGATTGAGCTGCTTGATCTTCGGTTTGGAGTGGGTTGTGCTGGTTTTGGCGTTCTGTTTGAAGTATTACTTTTATGTTGAGGGAAATGGAAGTGGTGAGCAGAGAAGTGCTAAGGTTCAACAGTTTGAAGATTCGAAGTGGGCGGCGGCGCCATTCCCAGTTTGA

Coding sequence (CDS)

ATGGGTCTCTCACCATCTTCACCATCACCCTCAATTTCCAGGTCACATTACAACATCCACAAGCTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCTCCTGCATTTTCCTAACTCTATCACTCCGCCTCATCCCCTCCGTATGCGGCTTCTTCATAATCTTCCTACACGCATTCACAATCGCCGGCGCTGTCTCCGGCTGCGCCATGGCTGCCGCCGCAACCGGGCGCTGGTTCGGCGTCCATATGGTCTTCACCGTCCTGACCGCCATATTTCAAGGCTCTGTTGCGGTTCTGATTTTCACCAGAACTAGCGATTTCCTTGGGGAACTGAAATCGTACGTCCGGGAGGAAGATGGGTCGGTGATTTTGAAATTGGGCGGCGGATTGAGCTGCTTGATCTTCGGTTTGGAGTGGGTTGTGCTGGTTTTGGCGTTCTGTTTGAAGTATTACTTTTATGTTGAGGGAAATGGAAGTGGTGAGCAGAGAAGTGCTAAGGTTCAACAGTTTGAAGATTCGAAGTGGGCGGCGGCGCCATTCCCAGTTTGA

Homology

[Close]

BLAST of CmoCh12G010000 vs. TrEMBL
Match: A0A0A0LHB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G083760 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 9.8e-83
Identity = 168/186 (90.32%), Postives = 175/186 (94.09%), Query Frame = 1


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSS S SIS SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHA
Sbjct: 1   MGLSPSS-STSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV VL+FTRT+DFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWA 180
           DGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVEGNG+GE  +RSAKVQQFEDS W 
Sbjct: 121 DGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTW- 180

Query: 181 AAPFPV 185
           AAPFPV
Sbjct: 181 AAPFPV 184

[Close]

BLAST of CmoCh12G010000 vs. TrEMBL
Match: D7ST03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.0e-64
Identity = 135/189 (71.43%), Postives = 152/189 (80.42%), Query Frame = 1


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLS  + S S++ SHY+ HK+FL CNYILLGAASSCIFLTLSLRL+PSVCGFF+I LH 
Sbjct: 1   MGLSIHNQSSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLHI 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
            TI GAVSGCA A+  T RW+  HMV TVLTAIFQGSV+VLIFTRTSDFLG+LKSYVREE
Sbjct: 61  LTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE-----QRSAKVQQFEDS 180
           DG+VILKL GGLS LIF LEWVV++LAF LKYY YVEG+G G      ++SAKVQQ ED 
Sbjct: 121 DGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSAKVQQEEDL 180

Query: 181 KWAAAPFPV 185
           K    PF V
Sbjct: 181 KDWPWPFQV 189

[Close]

BLAST of CmoCh12G010000 vs. TrEMBL
Match: B9HYG6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2)

HSP 1 Score: 242.7 bits (618), Expect = 3.6e-61
Identity = 131/183 (71.58%), Postives = 147/183 (80.33%), Query Frame = 1


Query: 7   SPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGA 66
           S + S+S+SHY+ H++FL CNYILLGAASSCIFLTLSLRL+PS+CGFF+I LH FTIAGA
Sbjct: 106 STNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILLHVFTIAGA 165

Query: 67  VSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREEDGSVIL 126
           VSGCA A++ T RW+  HMV TVLTAIFQGSV+VLIFTRT DFLG LKSYVREEDG VIL
Sbjct: 166 VSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVREEDGDVIL 225

Query: 127 KLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEG--NGSGE---QRSAKVQQFEDSKWAAAP 185
           KL GGL  +IF LEWVVL LAF LKYY YVEG  N  G+   +RSAKVQQ ED K    P
Sbjct: 226 KLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDEDLKDWPWP 285

[Close]

BLAST of CmoCh12G010000 vs. TrEMBL
Match: A0A0A0L253_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G045140 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.6e-61
Identity = 134/188 (71.28%), Postives = 151/188 (80.32%), Query Frame = 1


Query: 1   MGLS-PSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLH 60
           MG S  S+PS S++RSHY+ HKLFL  NYILLGAASSCIFLTLSLRL+PS+CG  +IFLH
Sbjct: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60

Query: 61  AFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVRE 120
             TIA AVSGCAMAAA++ RWFGVHMVFTVLTAIFQGSVA+L++TRT DFL ELKSYVRE
Sbjct: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120

Query: 121 EDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVE---GNGSGEQRSAKVQQFEDSK 180
           EDG+VILKL GGLS ++F LEWVVL LAF L+YY +VE    N     RSAKVQQ ED K
Sbjct: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK 180

Query: 181 WAAAPFPV 185
               PF V
Sbjct: 181 DWPWPFQV 188

[Close]

BLAST of CmoCh12G010000 vs. TrEMBL
Match: G7KSF0_MEDTR (Adenosylhomocysteinase, putative OS=Medicago truncatula GN=MTR_7g080550 PE=2 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 8.0e-61
Identity = 134/187 (71.66%), Postives = 147/187 (78.61%), Query Frame = 1


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLS ++P  +I+  HYNIHKLFL CNY+LLGAASSCIFLTLSLRL+PSVCGFF+I LH 
Sbjct: 1   MGLSMNNPPATITPRHYNIHKLFLFCNYVLLGAASSCIFLTLSLRLVPSVCGFFLILLHI 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCA  A    RW+  HMV TVLTAIFQGSV+VL+FTRTSDFLGEL+SYVREE
Sbjct: 61  FTIAGAVSGCA--AVGANRWYSAHMVATVLTAIFQGSVSVLVFTRTSDFLGELQSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQ---RSAKVQQFEDSKW 180
           DGSVILKL GGL+ LIF LEWVVL LAF LKYY  VEG  +       SAKVQQ ED K 
Sbjct: 121 DGSVILKLSGGLAILIFCLEWVVLTLAFFLKYYACVEGGNTCRTVVLGSAKVQQDEDLKD 180

Query: 181 AAAPFPV 185
              PF V
Sbjct: 181 WPWPFQV 185

[Close]

BLAST of CmoCh12G010000 vs. TAIR10
Match: AT5G16250.1 (AT5G16250.1 unknown protein)

HSP 1 Score: 219.2 bits (557), Expect = 2.2e-57
Identity = 121/180 (67.22%), Postives = 138/180 (76.67%), Query Frame = 1


Query: 6   SSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAG 65
           SS SP +  SHY+ HK+FL  NYILLGAASSCIFLTLSLRLIPS+CGF +I LHA TIA 
Sbjct: 5   SSSSP-VEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTIAA 64

Query: 66  AVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREEDGSVI 125
           AVSGCA A+    RW+  HMV TVLTAIFQGSV+VLIFT TS FLG LKSYVREED +VI
Sbjct: 65  AVSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAAVI 124

Query: 126 LKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVE-GNGSGEQRSAKVQQFEDSKWAAAPFPV 185
           LKLGGGL  +IF L+W+VLV AF LKYY YV+ G+G   +R+ KVQ  E+ K    PF V
Sbjct: 125 LKLGGGLCIVIFCLDWIVLVCAFFLKYYAYVDGGDGVAMKRTGKVQSEENPKDWPWPFQV 183

[Close]

BLAST of CmoCh12G010000 vs. TAIR10
Match: AT3G02640.1 (AT3G02640.1 unknown protein)

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-56
Identity = 120/183 (65.57%), Postives = 138/183 (75.41%), Query Frame = 1


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGL P  P  SI  SHY  HKLFL  NY+LLGA+SSCIFLTLSLRLIPS+CGFF+I LHA
Sbjct: 1   MGLIPQ-PQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
            TIA AVSGCA A+    RW+  HM+ TVLTAIFQGSV+VLIFT TS+FL  L SYVRE+
Sbjct: 61  TTIAAAVSGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREK 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEG--NGSGEQRSAKVQQFE---DS 179
           + S+ILKL GGL  +IF LEW+VLVLAF LKYY YV+G  NG   +R+ KVQ  E   +S
Sbjct: 121 EASMILKLAGGLCVVIFCLEWIVLVLAFFLKYYAYVDGDNNGVAMKRTGKVQSEETLKNS 180

[Close]

BLAST of CmoCh12G010000 vs. TAIR10
Match: AT5G36800.1 (AT5G36800.1 unknown protein)

HSP 1 Score: 184.5 bits (467), Expect = 5.9e-47
Identity = 107/177 (60.45%), Postives = 130/177 (73.45%), Query Frame = 1


Query: 12  ISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCA 71
           +S+S  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 72  MAAAATG-----RWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREEDGSVIL 131
           + A++T      R +G HMV TVLTAIFQG+V+VLIFTRT DFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 132 KLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSK-WAAAPF 183
           KL GGL  L+F LEW+VLVLAF LKY  Y++ +   +      +Q ED K W + PF
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRRQEEDLKDWPSYPF 179

[Close]

BLAST of CmoCh12G010000 vs. TAIR10
Match: AT5G36710.1 (AT5G36710.1 unknown protein)

HSP 1 Score: 184.5 bits (467), Expect = 5.9e-47
Identity = 107/177 (60.45%), Postives = 130/177 (73.45%), Query Frame = 1


Query: 12  ISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCA 71
           +S+S  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 72  MAAAATG-----RWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREEDGSVIL 131
           + A++T      R +G HMV TVLTAIFQG+V+VLIFTRT DFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 132 KLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSK-WAAAPF 183
           KL GGL  L+F LEW+VLVLAF LKY  Y++ +   +      +Q ED K W + PF
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRRQEEDLKDWPSYPF 179

[Close]

BLAST of CmoCh12G010000 vs. NCBI nr
Match: gi|449442239|ref|XP_004138889.1| (PREDICTED: uncharacterized protein LOC101217347 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 1.4e-82
Identity = 168/186 (90.32%), Postives = 175/186 (94.09%), Query Frame = 1


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSS S SIS SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHA
Sbjct: 1   MGLSPSS-STSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV VL+FTRT+DFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWA 180
           DGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVEGNG+GE  +RSAKVQQFEDS W 
Sbjct: 121 DGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTW- 180

Query: 181 AAPFPV 185
           AAPFPV
Sbjct: 181 AAPFPV 184

[Close]

BLAST of CmoCh12G010000 vs. NCBI nr
Match: gi|659082394|ref|XP_008441816.1| (PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo])

HSP 1 Score: 312.4 bits (799), Expect = 5.3e-82
Identity = 167/187 (89.30%), Postives = 173/187 (92.51%), Query Frame = 1


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSS S S+SRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHA
Sbjct: 1   MGLSPSS-STSVSRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV VL+FTRT DFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVE---GNGSGEQRSAKVQQFEDSKW 180
           DGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVE   GNG G +RSAKVQQFEDS W
Sbjct: 121 DGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGGNGEGLKRSAKVQQFEDSTW 180

Query: 181 AAAPFPV 185
            AAPFPV
Sbjct: 181 -AAPFPV 185

[Close]

BLAST of CmoCh12G010000 vs. NCBI nr
Match: gi|225467749|ref|XP_002265070.1| (PREDICTED: uncharacterized protein LOC100267455 [Vitis vinifera])

HSP 1 Score: 251.9 bits (642), Expect = 8.5e-64
Identity = 135/189 (71.43%), Postives = 152/189 (80.42%), Query Frame = 1


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLS  + S S++ SHY+ HK+FL CNYILLGAASSCIFLTLSLRL+PSVCGFF+I LH 
Sbjct: 1   MGLSIHNQSSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLHI 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
            TI GAVSGCA A+  T RW+  HMV TVLTAIFQGSV+VLIFTRTSDFLG+LKSYVREE
Sbjct: 61  LTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE-----QRSAKVQQFEDS 180
           DG+VILKL GGLS LIF LEWVV++LAF LKYY YVEG+G G      ++SAKVQQ ED 
Sbjct: 121 DGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSAKVQQEEDL 180

Query: 181 KWAAAPFPV 185
           K    PF V
Sbjct: 181 KDWPWPFQV 189

[Close]

BLAST of CmoCh12G010000 vs. NCBI nr
Match: gi|470132643|ref|XP_004302188.1| (PREDICTED: uncharacterized protein LOC101296972 [Fragaria vesca subsp. vesca])

HSP 1 Score: 247.7 bits (631), Expect = 1.6e-62
Identity = 137/191 (71.73%), Postives = 148/191 (77.49%), Query Frame = 1


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           +GL+ +      S SHY+ HK+FLLCNYILLGAASSCIFLTLSLRL+PSVCGFF+I LH 
Sbjct: 3   IGLNSNPSVAGASPSHYHTHKVFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFVILLHF 62

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTI GAVSGCA A+A TG+W+G HMV TVLTAIFQGSVAVLIFTRT DFLGELKSYVREE
Sbjct: 63  FTIVGAVSGCAAASAGTGKWYGAHMVATVLTAIFQGSVAVLIFTRTGDFLGELKSYVREE 122

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVE-------GNGSGEQRSAKVQQFE 180
           D SVILKLGGGLS LIF LEWVVL LAF LKYY  VE       GN     RS+KVQQ E
Sbjct: 123 DASVILKLGGGLSILIFCLEWVVLTLAFFLKYYASVEGDHIQLGGNSRAAMRSSKVQQEE 182

Query: 181 DSKWAAAPFPV 185
           D K    PF V
Sbjct: 183 DLKDWPWPFQV 193

[Close]

BLAST of CmoCh12G010000 vs. NCBI nr
Match: gi|659096260|ref|XP_008449000.1| (PREDICTED: uncharacterized protein LOC103491004 [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 8.0e-62
Identity = 136/189 (71.96%), Postives = 154/189 (81.48%), Query Frame = 1


Query: 1   MGLS-PSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLH 60
           MG S  S+PS S++RSHY+ HKLFL  NYILLGAASSCIFLTLSLRL+PS+CG  +IFLH
Sbjct: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60

Query: 61  AFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVRE 120
             TIA AVSGCAMAAA++ RWFGVHMVFTVLTAIFQGSVA+L++TRT DFL ELKSYVRE
Sbjct: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLLELKSYVRE 120

Query: 121 EDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE----QRSAKVQQFEDS 180
           EDG+VILKL GGLS ++F LEWVVL LAF L+YY +VEG+GS       RSAKVQQ ED 
Sbjct: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEGDGSNNNGAAMRSAKVQQDEDL 180

Query: 181 KWAAAPFPV 185
           K    PF V
Sbjct: 181 KDWPWPFQV 189

The following BLAST results are available for this feature:

BLAST of CmoCh12G010000 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh12G010000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHB3_CUCSA	9.8e-83	90.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G083760 PE=4 SV=1	[more]
D7ST03_VITVI	6.0e-64	71.43	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=...	[more]
B9HYG6_POPTR	3.6e-61	71.58	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2	[more]
A0A0A0L253_CUCSA	3.6e-61	71.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G045140 PE=4 SV=1	[more]
G7KSF0_MEDTR	8.0e-61	71.66	Adenosylhomocysteinase, putative OS=Medicago truncatula GN=MTR_7g080550 PE=2 SV=...	[more]

BLAST of CmoCh12G010000 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16250.1	2.2e-57	67.22	unknown protein	[more]
AT3G02640.1	2.4e-56	65.57	unknown protein	[more]
AT5G36800.1	5.9e-47	60.45	unknown protein	[more]
AT5G36710.1	5.9e-47	60.45	unknown protein	[more]

BLAST of CmoCh12G010000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442239\|ref\|XP_004138889.1\|	1.4e-82	90.32	PREDICTED: uncharacterized protein LOC101217347 [Cucumis sativus]	[more]
gi\|659082394\|ref\|XP_008441816.1\|	5.3e-82	89.30	PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo]	[more]
gi\|225467749\|ref\|XP_002265070.1\|	8.5e-64	71.43	PREDICTED: uncharacterized protein LOC100267455 [Vitis vinifera]	[more]
gi\|470132643\|ref\|XP_004302188.1\|	1.6e-62	71.73	PREDICTED: uncharacterized protein LOC101296972 [Fragaria vesca subsp. vesca]	[more]
gi\|659096260\|ref\|XP_008449000.1\|	8.0e-62	71.96	PREDICTED: uncharacterized protein LOC103491004 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G010000.1	CmoCh12G010000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34124	FAMILY NOT NAMED	coord: 1..184 score: 2.6
None	No IPR available	PANTHER	PTHR34124:SF2	F16B3.27 PROTEIN	coord: 1..184 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G010000	Cucsa.277650	Cucumber (Gy14) v1	cgycmoB0767
CmoCh12G010000	CmaCh12G009900	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G010000	CmaCh05G007820	Cucurbita maxima (Rimu)	cmacmoB764
CmoCh12G010000	Csa2G083760	Cucumber (Chinese Long) v2	cmocuB150
CmoCh12G010000	MELO3C008682	Melon (DHL92) v3.5.1	cmomeB163
CmoCh12G010000	ClCG11G010020	Watermelon (Charleston Gray)	cmowcgB135
CmoCh12G010000	CSPI02G07850	Wild cucumber (PI 183967)	cmocpiB151
CmoCh12G010000	Lsi11G009250	Bottle gourd (USVL1VR-Ls)	cmolsiB143
CmoCh12G010000	MELO3C008682.2	Melon (DHL92) v3.6.1	cmomedB179
CmoCh12G010000	CsaV3_2G010270	Cucumber (Chinese Long) v3	cmocucB0177
CmoCh12G010000	Cla97C11G216310	Watermelon (97103) v2	cmowmbB157
CmoCh12G010000	CsGy2G008110	Cucumber (Gy14) v2	cgybcmoB161
CmoCh12G010000	Carg23472	Silver-seed gourd	carcmoB0652

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G010000	Wax gourd	cmowgoB0180
CmoCh12G010000	Cucurbita moschata (Rifu)	cmocmoB149
CmoCh12G010000	Melon (DHL92) v3.5.1	cmomeB167
CmoCh12G010000	Cucurbita pepo (Zucchini)	cmocpeB175
CmoCh12G010000	Melon (DHL92) v3.6.1	cmomedB184