CsaV3_2G009300 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G009300
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Protein ASYMMETRIC LEAVES 2
Location	chr2 : 5807886 .. 5809971 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCACTCTATCATCCCGTCAATAAAAAGCTATCTTATTTTTCTAATTTATATATCTAAAATTTCAAGCTTGAAACTTCTTAAATGTGTTCAAAGTTCAAGATTTAGGGTGGGCACAGGTGTCTCCAGACATAGGGGAAGGAAAACTCCAACTCATTCTTATAGAATAACAATAATTAATAATCTAATATATTTTGCTCTAAAACTCATGTGAAAGCAAAAATATTTAAAAAGAAAAAGAAAGAAAAAGGAAAGAATTTTTCATGCATGCATGGATGTAATGTAAGTAATTAGATATTATAAGTTTTTTTTAAAAAGGTGTTTGGAAATCCCGAGACATTGACAAAGAAGAAGAAGAAAAAAAGAGAGAAAAGATTGAGAGATCTCTCCCACAAGTTGAAGTCAAAGAATGATGGAGACAACTCTGTTTAGTCATTCTTATTCTCTTTTGCCTTCTCTCCTTTTTAGGAAAAATCCTTTAAATTTATCCCTTCTTCTCTCTTTCAACCCCCTTTTCTTATTATTATTATTAATTTTTATTTAACATTTACTGGAAAAATGGGACTGTACTTAAATATTTTCAACCAGATCTTCTTCTTCTTCTTCCCCCTCTCTTCCATGTTTTCTTATTATACTATTCATCGATCACAGTGAACCAAAAAAAAAATACTTTTCTCTCTCTCTCTCTCTCTCTCTAAAAACCCATCTTCCTTTTTGCTTCTCTTTTCTTCTTCACGAGATCCAACTTCTCAAAACCCACTTGTAAAAGGGTAAGATTTTGATTTCCCCCTCTTTTTCCTCTTTGGTTTCTGCATTTTTCTTCTCTCTCTCCTCTCACTTTGGTCTAAGGTATACGGTTCCTATCTTTTCCTTTGTTTTCACAAACCCATCTTTGGATTCAACCAAACCTTCTGCTCCTACTTTGTTTCGTCAATGGAAAAACAACCATGAAAATCAAGATTATTTTGTTCTATAGAGATATTCTCTGTATAAAAGAAAAATATTTCCTCACATAATCCTCTTTTGATTCAATTCCAATTCAGAAATAACTTTGCTCTTTAATCCCATGTGTTTTCCATATCCACAATTTATAGGGTAAATCTTTCCTATAGACAGCGTTATATGGAAATTTTCTTCTTTCTCTTGTAAACAGACAGACAAACAAAGCAAACAAGTCAAGTGCATAACATGTATAACAGTTCTCTAATCCAGATTTTTCTTCTCTTTTTTCTTAATGATGATTTTGAGTCTATTGTTTGATTGAAAAGCAAGCAGTCAAGTACATAACATGATAGTTGTTTAGTTCATAGTGATTTTTCCCCTTTTTGTGAACGAGTTTTTTTAGTGTATGTGCTTGATTGGTTATGTTGAAGTCTAATAGAGTGTTCTTACAGAGGAGGAATTGGAAGATGGCTTCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAGCCGGAATGTGTTTTTGCGCCGTATTTTCCACCGGATCAGCCTCAGAAATTCGCAAATGTTCACAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTACATCCTCACCAGAGAGAAGACGCTGTCAATTCCCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTACGGCTGTGTTGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACTTAGGGATTGGTAACCACGCTACCCTGATTTCGCCGCCTTCCACCCTTTCTACCGTCCCTCATGGACAGAGAAACCACCAGCCGGCGTTCAATTTCGCTCGAGATCAACCGCATAGTCTTTATCACGACCAATTTTTCCCTCGAGATCAACAACAACCACAGATGATGCTACGACGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAGGGTTTCGTTTTGTTTCTCTT

mRNA sequence

ATGGCTTCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAGCCGGAATGTGTTTTTGCGCCGTATTTTCCACCGGATCAGCCTCAGAAATTCGCAAATGTTCACAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTACATCCTCACCAGAGAGAAGACGCTGTCAATTCCCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTACGGCTGTGTTGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACTTAGGGATTGGTAACCACGCTACCCTGATTTCGCCGCCTTCCACCCTTTCTACCGTCCCTCATGGACAGAGAAACCACCAGCCGGCGTTCAATTTCGCTCGAGATCAACCGCATAGTCTTTATCACGACCAATTTTTCCCTCGAGATCAACAACAACCACAGATGATGCTACGACGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG

Coding sequence (CDS)

ATGGCTTCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAGCCGGAATGTGTTTTTGCGCCGTATTTTCCACCGGATCAGCCTCAGAAATTCGCAAATGTTCACAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTACATCCTCACCAGAGAGAAGACGCTGTCAATTCCCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTACGGCTGTGTTGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACTTAGGGATTGGTAACCACGCTACCCTGATTTCGCCGCCTTCCACCCTTTCTACCGTCCCTCATGGACAGAGAAACCACCAGCCGGCGTTCAATTTCGCTCGAGATCAACCGCATAGTCTTTATCACGACCAATTTTTCCCTCGAGATCAACAACAACCACAGATGATGCTACGACGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG

Protein sequence

MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS

Homology

[Close]

BLAST of CsaV3_2G009300 vs. NCBI nr
Match: XP_004152887.1 (PREDICTED: LOB domain-containing protein 6 [Cucumis sativus] >XP_011648980.1 PREDICTED: LOB domain-containing protein 6 [Cucumis sativus] >KGN61226.1 hypothetical protein Csa_2G070920 [Cucumis sativus])

HSP 1 Score: 452.2 bits (1162), Expect = 1.0e-123
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180
           ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180

Query: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 218

[Close]

BLAST of CsaV3_2G009300 vs. NCBI nr
Match: XP_008441920.1 (PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441922.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 6.1e-113
Identity = 205/220 (93.18%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD--QQQPQMMLRRNFDGG 180
           ATLISPPS LSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD              DGG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDXXXXXXXXXXXXXXDGG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 220

[Close]

BLAST of CsaV3_2G009300 vs. NCBI nr
Match: XP_022149820.1 (LOB domain-containing protein 6 isoform X1 [Momordica charantia])

HSP 1 Score: 397.9 bits (1021), Expect = 2.2e-107
Identity = 197/219 (89.95%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 17  MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 76

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 77  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 136

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180
           A LISPPS      HG R++QPAFNF RDQPHSLYHDQ FPRDQQQ QMM+R  FDGGSN
Sbjct: 137 AALISPPSAAVATAHGPRSNQPAFNFVRDQPHSLYHDQIFPRDQQQ-QMMIRSGFDGGSN 196

Query: 181 YD-GLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           YD GLLAVNVT SI NL HQFQQ RAAAG DRRGTLDHS
Sbjct: 197 YDAGLLAVNVTPSIANLGHQFQQPRAAAGVDRRGTLDHS 234

[Close]

BLAST of CsaV3_2G009300 vs. NCBI nr
Match: XP_022149821.1 (LOB domain-containing protein 6 isoform X2 [Momordica charantia])

HSP 1 Score: 397.9 bits (1021), Expect = 2.2e-107
Identity = 197/219 (89.95%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180
           A LISPPS      HG R++QPAFNF RDQPHSLYHDQ FPRDQQQ QMM+R  FDGGSN
Sbjct: 121 AALISPPSAAVATAHGPRSNQPAFNFVRDQPHSLYHDQIFPRDQQQ-QMMIRSGFDGGSN 180

Query: 181 YD-GLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           YD GLLAVNVT SI NL HQFQQ RAAAG DRRGTLDHS
Sbjct: 181 YDAGLLAVNVTPSIANLGHQFQQPRAAAGVDRRGTLDHS 218

[Close]

BLAST of CsaV3_2G009300 vs. NCBI nr
Match: XP_023546811.1 (LOB domain-containing protein 6 [Cucurbita pepo subsp. pepo] >XP_023546812.1 LOB domain-containing protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.4 bits (921), Expect = 8.8e-96
Identity = 182/220 (82.73%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLT AKSELSKY+ LGIGN 
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD--QQQPQMMLRRNFDGG 180
           A LIS PS L+     QRNHQP FNF RDQPHSL +DQFFPRD             FDGG
Sbjct: 121 AALISSPSPLT----AQRNHQPTFNFGRDQPHSLCYDQFFPRDXXXXXXXXXXXXXFDGG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           +NYDGLLAVNVT  +GNL+H FQQ+RAAAGDDRRGTLDHS
Sbjct: 181 TNYDGLLAVNVT--VGNLTHPFQQSRAAAGDDRRGTLDHS 214

[Close]

BLAST of CsaV3_2G009300 vs. TAIR10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 257.7 bits (657), Expect = 6.5e-69
Identity = 147/220 (66.82%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 121 NHATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGG 180
            H +L    + L+    G           RD  H   H QFFPR+    QM    +   G
Sbjct: 121 THQSL--GINLLAGAADG------TATAVRDHYH---HHQFFPRE----QMFGGLDVPAG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of CsaV3_2G009300 vs. TAIR10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.3e-45
Identity = 85/114 (74.56%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 1   MASSSS--NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELH 60
           MASSS+  NSPCAACKFLRRKC P C+FAPYFPP++P KFANVHK+FGASNVTKLLNEL 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKY 113
           PHQREDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+ +LQ +L  A ++L+ Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

[Close]

BLAST of CsaV3_2G009300 vs. TAIR10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 174.9 bits (442), Expect = 5.6e-44
Identity = 91/132 (68.94%), Postives = 103/132 (78.03%), Query Frame = 0


Query: 4   SSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQRE 63
           +SS+SPCAACKFLRRKC  ECVFAPYFPPDQPQKFA VHKVFGASNV KLLNEL  +QRE
Sbjct: 2   ASSSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQRE 61

Query: 64  DAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHATL 123
           DAVNSL YEA+ RLRDPVYGCVG+IS+LQH+L ++  DL  AK EL+ Y    +G  A L
Sbjct: 62  DAVNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY----VGPQAML 121

Query: 124 -ISPPSTLSTVP 135
            I  P  +S  P
Sbjct: 122 PILQPHFMSLPP 129

[Close]

BLAST of CsaV3_2G009300 vs. TAIR10
Match: AT3G27650.1 (LOB domain-containing protein 25)

HSP 1 Score: 168.3 bits (425), Expect = 5.2e-42
Identity = 75/110 (68.18%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 3   SSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR 62
           S+ +NSPCAACKFLRRKC  +CVFAPYFPP++P KFANVH++FGASNV+K+L+E+ PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 63  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKY 113
           EDAVNSLAYEA+ RL+DPVYGCVG IS+LQ Q+ +LQ +L    ++L +Y
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRY 142

[Close]

BLAST of CsaV3_2G009300 vs. TAIR10
Match: AT2G23660.1 (LOB domain-containing protein 10)

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-39
Identity = 74/107 (69.16%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 6   SNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDA 65
           +++PCAACK LRRKC  ECVFAPYFPP  PQKF  VH+VFGASNVTK+LN+L P QRED 
Sbjct: 2   ASTPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDT 61

Query: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKY 113
           VNSL YEA+ R+RDP+YGCVG+IS LQ  L K+Q DL  AK EL  Y
Sbjct: 62  VNSLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVGY 108

[Close]

BLAST of CsaV3_2G009300 vs. Swiss-Prot
Match: sp|O04479|AS2_ARATH (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67
Identity = 147/220 (66.82%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 121 NHATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGG 180
            H +L    + L+    G           RD  H   H QFFPR+    QM    +   G
Sbjct: 121 THQSL--GINLLAGAADG------TATAVRDHYH---HHQFFPRE----QMFGGLDVPAG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of CsaV3_2G009300 vs. Swiss-Prot
Match: sp|Q32SG3|LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.0e-50
Identity = 107/183 (58.47%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 6   SNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDA 65
           + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDA 89

Query: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHATLIS 125
           VNSLAYEADMRLRDPVYGCVGVIS+LQH L +LQ DL  AK ELSKYQ     + +T  +
Sbjct: 90  VNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASXSTAPT 149

Query: 126 PPSTL-----STVPHGQRN-----HQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNF 179
            P  +     + +P+G  N     H  A                F ++Q     ML R++
Sbjct: 150 GPQAMAEFIGNAMPNGAHNFINIGHSAALGSLGGSA------SVFGQEQFGNAQMLSRSY 206

[Close]

BLAST of CsaV3_2G009300 vs. Swiss-Prot
Match: sp|A1YKY7|IAL1_MAIZE (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 7.2e-49
Identity = 103/184 (55.98%), Postives = 123/184 (66.85%), Query Frame = 0


Query: 6   SNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDA 65
           + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF  VH+VFGASNVTKL+NE+HP QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDA 89

Query: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHATLIS 125
           +NSLAYEADMR+RDPVYGCVGVIS+LQH L +LQ DL  AK ELSKYQ     + +T  +
Sbjct: 90  MNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASXSTAPT 149

Query: 126 PPSTL-----STVPHGQRN------HQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRN 179
            P  +     S +P+G  +      H  A              + F  + Q    ML R+
Sbjct: 150 GPQAMAEFIGSAMPNGAAHNFINLGHSAALGSLGGSTAMFGQQEQFGSNAQ----MLSRS 209

[Close]

BLAST of CsaV3_2G009300 vs. Swiss-Prot
Match: sp|A2WXT0|LBD6_ORYSI (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-47
Identity = 89/106 (83.96%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVN 67
           SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+QREDAVN
Sbjct: 37  SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVN 96

Query: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQ 114
           SLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKYQ
Sbjct: 97  SLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQ 142

[Close]

BLAST of CsaV3_2G009300 vs. Swiss-Prot
Match: sp|Q8LQH4|LBD6_ORYSJ (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-47
Identity = 89/106 (83.96%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVN 67
           SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+QREDAVN
Sbjct: 37  SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVN 96

Query: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQ 114
           SLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKYQ
Sbjct: 97  SLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQ 142

[Close]

BLAST of CsaV3_2G009300 vs. TrEMBL
Match: tr|A0A0A0LML7|A0A0A0LML7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 6.6e-124
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180
           ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180

Query: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 218

[Close]

BLAST of CsaV3_2G009300 vs. TrEMBL
Match: tr|A0A1S3B5A0|A0A1S3B5A0_CUCME (LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.0e-113
Identity = 205/220 (93.18%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD--QQQPQMMLRRNFDGG 180
           ATLISPPS LSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD              DGG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDXXXXXXXXXXXXXXDGG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 220

[Close]

BLAST of CsaV3_2G009300 vs. TrEMBL
Match: tr|A0A2I4G2A8|A0A2I4G2A8_9ROSI (LOB domain-containing protein 6-like OS=Juglans regia OX=51240 GN=LOC109004073 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 8.2e-74
Identity = 154/217 (70.97%), Postives = 165/217 (76.04%), Query Frame = 0


Query: 3   SSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR 62
           +SSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR
Sbjct: 2   ASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR 61

Query: 63  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAT 122
           EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQMDL+CAKSELSKYQNLGI +H  
Sbjct: 62  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKSELSKYQNLGITSHGL 121

Query: 123 LISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSNYD 182
           +                                   FFPRD    Q M+ R+FD G+NYD
Sbjct: 122 IAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPRDHIHQQQMI-RSFDSGNNYD 181

Query: 183 -GLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
             LLA+NV+ASIG LS QFQQTRAAAGDDRR T+D S
Sbjct: 182 ASLLAMNVSASIGQLS-QFQQTRAAAGDDRR-TIDPS 215

[Close]

BLAST of CsaV3_2G009300 vs. TrEMBL
Match: tr|A0A1Q3CNS9|A0A1Q3CNS9_CEPFO (DUF260 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_25373 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.5e-71
Identity = 152/216 (70.37%), Postives = 160/216 (74.07%), Query Frame = 0


Query: 3   SSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR 62
           +SSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP QR
Sbjct: 2   ASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQR 61

Query: 63  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAT 122
           EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQMDL+CAKSELSKYQNLGI  HA 
Sbjct: 62  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKSELSKYQNLGITGHAG 121

Query: 123 LIS-----PPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDG 182
           LI+                                     QFFPRDQQ     + R FD 
Sbjct: 122 LIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFFPRDQQH----MIRGFDA 181

Query: 183 GSNYD-GLLAVNVTASIGNLSHQFQQTRAAAGDDRR 213
            SNYD  LLA+NV+AS+G LS QFQQ RAAAGDDRR
Sbjct: 182 SSNYDASLLAMNVSASLGQLS-QFQQPRAAAGDDRR 212

[Close]

BLAST of CsaV3_2G009300 vs. TrEMBL
Match: tr|A0A2I4HMC8|A0A2I4HMC8_9ROSI (LOB domain-containing protein 6-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109019432 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.4e-70
Identity = 152/217 (70.05%), Postives = 163/217 (75.12%), Query Frame = 0


Query: 3   SSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR 62
           +SSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELH HQR
Sbjct: 2   ASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHSHQR 61

Query: 63  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAT 122
           EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQMDL+CAKSELSKYQNLGI +H  
Sbjct: 62  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKSELSKYQNLGITSHG- 121

Query: 123 LISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSNYD 182
           LI+                                  FPRDQQQ    + R+FD G+NYD
Sbjct: 122 LIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPRDQQQ----MIRSFDSGNNYD 181

Query: 183 -GLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
             LLA+NV+ASIG LS QFQQ R A GDDRR T+D S
Sbjct: 182 ASLLAMNVSASIGQLS-QFQQPRTATGDDRR-TIDPS 211

The following BLAST results are available for this feature:

BLAST of CsaV3_2G009300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152887.1	1.0e-123	100.00	PREDICTED: LOB domain-containing protein 6 [Cucumis sativus] >XP_011648980.1 PRE...	[more]
XP_008441920.1	6.1e-113	93.18	PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDIC...	[more]
XP_022149820.1	2.2e-107	89.95	LOB domain-containing protein 6 isoform X1 [Momordica charantia]	[more]
XP_022149821.1	2.2e-107	89.95	LOB domain-containing protein 6 isoform X2 [Momordica charantia]	[more]
XP_023546811.1	8.8e-96	82.73	LOB domain-containing protein 6 [Cucurbita pepo subsp. pepo] >XP_023546812.1 LOB...	[more]

BLAST of CsaV3_2G009300 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65620.1	6.5e-69	66.82	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.2	2.3e-45	74.56	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G66870.1	5.6e-44	68.94	ASYMMETRIC LEAVES 2-like 1	[more]
AT3G27650.1	5.2e-42	68.18	LOB domain-containing protein 25	[more]
AT2G23660.1	4.1e-39	69.16	LOB domain-containing protein 10	[more]

BLAST of CsaV3_2G009300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04479\|AS2_ARATH	1.2e-67	66.82	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
sp\|Q32SG3\|LBD6_MAIZE	1.0e-50	58.47	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
sp\|A1YKY7\|IAL1_MAIZE	7.2e-49	55.98	Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1	[more]
sp\|A2WXT0\|LBD6_ORYSI	1.8e-47	83.96	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
sp\|Q8LQH4\|LBD6_ORYSJ	1.8e-47	83.96	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of CsaV3_2G009300 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LML7\|A0A0A0LML7_CUCSA	6.6e-124	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=4 SV=1	[more]
tr\|A0A1S3B5A0\|A0A1S3B5A0_CUCME	4.0e-113	93.18	LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=4 SV=...	[more]
tr\|A0A2I4G2A8\|A0A2I4G2A8_9ROSI	8.2e-74	70.97	LOB domain-containing protein 6-like OS=Juglans regia OX=51240 GN=LOC109004073 P...	[more]
tr\|A0A1Q3CNS9\|A0A1Q3CNS9_CEPFO	8.5e-71	70.37	DUF260 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_2...	[more]
tr\|A0A2I4HMC8\|A0A2I4HMC8_9ROSI	1.4e-70	70.05	LOB domain-containing protein 6-like isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009943	adaxial/abaxial axis specification
biological_process	GO:0048441	petal development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0009954	proximal/distal pattern formation
biological_process	GO:0009799	specification of symmetry
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G009300.1	CsaV3_2G009300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 9..106 e-value: 1.5E-43 score: 147.2
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 8..109 score: 27.116
None	No IPR available	PANTHER	PTHR31301:SF5	LOB DOMAIN-CONTAINING PROTEIN 6	coord: 3..218
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 3..218

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G009300	CSPI02G06890	Wild cucumber (PI 183967)	cpicucB080
CsaV3_2G009300	Cucsa.178830	Cucumber (Gy14) v1	cgycucB287
CsaV3_2G009300	CmaCh05G007420	Cucurbita maxima (Rimu)	cmacucB0928
CsaV3_2G009300	CmoCh05G007810	Cucurbita moschata (Rifu)	cmocucB0920
CsaV3_2G009300	Cp4.1LG11g06540	Cucurbita pepo (Zucchini)	cpecucB0108
CsaV3_2G009300	CsGy2G007070	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G009300	Carg19827	Silver-seed gourd	carcucB0191
CsaV3_2G009300	Cla005759	Watermelon (97103) v1	cucwmB175
CsaV3_2G009300	MELO3C008779	Melon (DHL92) v3.5.1	cucmeB141
CsaV3_2G009300	MELO3C008779.2	Melon (DHL92) v3.6.1	cucmedB134
CsaV3_2G009300	Bhi06G001037	Wax gourd	cucwgoB140

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G009300	Silver-seed gourd	carcucB0005
CsaV3_2G009300	Cucurbita maxima (Rimu)	cmacucB0193
CsaV3_2G009300	Cucurbita moschata (Rifu)	cmocucB0177
CsaV3_2G009300	Cucurbita pepo (Zucchini)	cpecucB1005
CsaV3_2G009300	Bottle gourd (USVL1VR-Ls)	cuclsiB108
CsaV3_2G009300	Watermelon (Charleston Gray)	cucwcgB119
CsaV3_2G009300	Watermelon (97103) v2	cucwmbB114