CmaCh05G007420 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh05G007420
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionLOB domain protein 6
LocationCma_Chr05 : 4237544 .. 4238197 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCACCTCCTCCAATTCGCCCTGTGCTGCTTGCAAATTCCTCCGCCGTAAATGTCAACCGGAATGTGTTTTCGCGCCCTATTTCCCGCCGGATCAGCCTCAGAAATTCGCGAATGTTCATAAGGTATTTGGCGCTAGTAATGTCACTAAACTTCTCAACGAATTGCATCCTCACCAGCGCGAAGACGCTGTTAATTCTCTCGCTTATGAAGCCGATATGCGTCTCCGTGATCCTGTTTATGGCTGTGTTGGAGTAATTTCTCTGCTTCAACATCAACTCTGTAAACTCCAAATGGATCTCACTTCCGCTAAATCCGAACTCTCTAAGTATAAAACCCTAGGCATTGGGAACCCCGCCGCCCTGATTTCCTCGCCTTCTTCTCTTACTGCACAGCGGAACCACCAGCCGACGTTTAATTTTGGTAGAGATCAACCTCATAGTCTCTGTTACGATCAATTTTTCCCTCGCGATCAACAACAACAACAACAACAACAACAACAGATGATGCTCCGACGAAACTTCGACGGTGGTACTAACTACGATGGACTTTTGGCCGTCAATGTCACCGTCGGTAACCTTACCCACCCGTTCCAGCAATCTCGCGCCGCTGCTGGAGACGATCGTCGCGGAACTCTCGACCATTCTTAG

mRNA sequence

ATGGCATCCACCTCCTCCAATTCGCCCTGTGCTGCTTGCAAATTCCTCCGCCGTAAATGTCAACCGGAATGTGTTTTCGCGCCCTATTTCCCGCCGGATCAGCCTCAGAAATTCGCGAATGTTCATAAGGTATTTGGCGCTAGTAATGTCACTAAACTTCTCAACGAATTGCATCCTCACCAGCGCGAAGACGCTGTTAATTCTCTCGCTTATGAAGCCGATATGCGTCTCCGTGATCCTGTTTATGGCTGTGTTGGAGTAATTTCTCTGCTTCAACATCAACTCTGTAAACTCCAAATGGATCTCACTTCCGCTAAATCCGAACTCTCTAAGTATAAAACCCTAGGCATTGGGAACCCCGCCGCCCTGATTTCCTCGCCTTCTTCTCTTACTGCACAGCGGAACCACCAGCCGACGTTTAATTTTGGTAGAGATCAACCTCATAGTCTCTGTTACGATCAATTTTTCCCTCGCGATCAACAACAACAACAACAACAACAACAACAGATGATGCTCCGACGAAACTTCGACGGTGGTACTAACTACGATGGACTTTTGGCCGTCAATGTCACCGTCGGTAACCTTACCCACCCGTTCCAGCAATCTCGCGCCGCTGCTGGAGACGATCGTCGCGGAACTCTCGACCATTCTTAG

Coding sequence (CDS)

ATGGCATCCACCTCCTCCAATTCGCCCTGTGCTGCTTGCAAATTCCTCCGCCGTAAATGTCAACCGGAATGTGTTTTCGCGCCCTATTTCCCGCCGGATCAGCCTCAGAAATTCGCGAATGTTCATAAGGTATTTGGCGCTAGTAATGTCACTAAACTTCTCAACGAATTGCATCCTCACCAGCGCGAAGACGCTGTTAATTCTCTCGCTTATGAAGCCGATATGCGTCTCCGTGATCCTGTTTATGGCTGTGTTGGAGTAATTTCTCTGCTTCAACATCAACTCTGTAAACTCCAAATGGATCTCACTTCCGCTAAATCCGAACTCTCTAAGTATAAAACCCTAGGCATTGGGAACCCCGCCGCCCTGATTTCCTCGCCTTCTTCTCTTACTGCACAGCGGAACCACCAGCCGACGTTTAATTTTGGTAGAGATCAACCTCATAGTCTCTGTTACGATCAATTTTTCCCTCGCGATCAACAACAACAACAACAACAACAACAACAGATGATGCTCCGACGAAACTTCGACGGTGGTACTAACTACGATGGACTTTTGGCCGTCAATGTCACCGTCGGTAACCTTACCCACCCGTTCCAGCAATCTCGCGCCGCTGCTGGAGACGATCGTCGCGGAACTCTCGACCATTCTTAG

Protein sequence

MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPAALISSPSSLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMMLRRNFDGGTNYDGLLAVNVTVGNLTHPFQQSRAAAGDDRRGTLDHS
Homology
[Close]
BLAST of CmaCh05G007420 vs. Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.2e-64
Identity = 142/217 (65.44%), Postives = 157/217 (72.35%), Query Frame = 1 

Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+ AKSELSKY++LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI--L 120

Query: 121 AALISSPSSLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMMLRRNFDGGT 180
           AA   S            T    RD  H   + QFFPR+Q         M    +   G 
Sbjct: 121 AATHQSLGINLLAGAADGTATAVRDHYH---HHQFFPREQ---------MFGGLDVPAGN 180

Query: 181 NYDGLLAVNVTVGNLTHPFQQSRAAAGDDRRGTLDHS 218
           NYDG +   + +G +T  FQQ RAAAGDD R T+D S
Sbjct: 181 NYDGGI---LAIGQITQ-FQQPRAAAGDDGRRTVDPS 199

[Close]
BLAST of CmaCh05G007420 vs. Swiss-Prot
Match: LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.5e-48
Identity = 108/185 (58.38%), Postives = 123/185 (66.49%), Query Frame = 1 

Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A   + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP Q
Sbjct: 26  AVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQ 85

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPA 121
           REDAVNSLAYEADMRLRDPVYGCVGVIS+LQH L +LQ DL  AK ELSKY+     + +
Sbjct: 86  REDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASAS 145

Query: 122 ALISSPSSL-----TAQRNHQPTF-NFGRDQPHSLCYDQF-FPRDQQQQQQQQQQMMLRR 180
              + P ++      A  N    F N G    HS              Q+Q     ML R
Sbjct: 146 TAPTGPQAMAEFIGNAMPNGAHNFINIG----HSAALGSLGGSASVFGQEQFGNAQMLSR 205

[Close]
BLAST of CmaCh05G007420 vs. Swiss-Prot
Match: LBD6_ORYSI (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica GN=LBD6 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.5e-48
Identity = 92/125 (73.60%), Postives = 103/125 (82.40%), Query Frame = 1 

Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A+  + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPA 121
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKY+       A
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150

Query: 122 ALISS 127
           A  S+
Sbjct: 151 ASAST 155

[Close]
BLAST of CmaCh05G007420 vs. Swiss-Prot
Match: LBD6_ORYSJ (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=LBD6 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.5e-48
Identity = 92/125 (73.60%), Postives = 103/125 (82.40%), Query Frame = 1 

Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A+  + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPA 121
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKY+       A
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150

Query: 122 ALISS 127
           A  S+
Sbjct: 151 ASAST 155

[Close]
BLAST of CmaCh05G007420 vs. Swiss-Prot
Match: IAL1_MAIZE (Protein IAL1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-46
Identity = 101/181 (55.80%), Postives = 122/181 (67.40%), Query Frame = 1 

Query: 6   SNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDA 65
           + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF  VH+VFGASNVTKL+NE+HP QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDA 89

Query: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPAALIS 125
           +NSLAYEADMR+RDPVYGCVGVIS+LQH L +LQ DL  AK ELSKY+     + +   +
Sbjct: 90  MNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPT 149

Query: 126 SPSSLT----AQRNHQPTFNFGRDQPHSLCYDQFFPRDQ---QQQQQQQQQMMLRRNFDG 180
            P ++     +   +    NF  +  HS              QQ+Q      ML R++DG
Sbjct: 150 GPQAMAEFIGSAMPNGAAHNF-INLGHSAALGSLGGSTAMFGQQEQFGSNAQMLSRSYDG 209

[Close]
BLAST of CmaCh05G007420 vs. TrEMBL
Match: A0A0A0LML7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070920 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.3e-102
Identity = 192/223 (86.10%), Postives = 201/223 (90.13%), Query Frame = 1 

Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLT AKSELSKY+ LGIGN 
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 AALISSPSSLT----AQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMMLRRNF 180
           A LIS PS+L+     QRNHQP FNF RDQPHSL +DQFFPRD     QQQ QMMLRRNF
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD-----QQQPQMMLRRNF 180

Query: 181 DGGTNYDGLLAVNVT--VGNLTHPFQQSRAAAGDDRRGTLDHS 218
           DGG+NYDGLLAVNVT  +GNL+H FQQ+RAAAGDDRRGTLDHS
Sbjct: 181 DGGSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 218

[Close]
BLAST of CmaCh05G007420 vs. TrEMBL
Match: M5W2T3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa027059mg PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.5e-69
Identity = 158/246 (64.23%), Postives = 174/246 (70.73%), Query Frame = 1 

Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           +S+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ
Sbjct: 4   SSSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 63

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPA 121
           REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQMDLT AKSELSKY+ L  G  A
Sbjct: 64  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSKYQNLQHGLTA 123

Query: 122 A--LISSPSSLTAQRNHQPTF-----------NFGRDQPHSLCY----------DQFFPR 181
           +  LI++ ++  A   H P             N       +L             QFFPR
Sbjct: 124 SHGLIAAAAAAAAAHTHHPLHLQSSSSTLHNNNNNLGMGINLISGGGGGRDHYPHQFFPR 183

Query: 182 DQQQQQQQQQQMMLRRNFDGGTNYD-GLLAVNVTV------GNLTHPFQQSRAAAGDDRR 218
           D+  Q QQQ   M+ R+FD G NYD  LLA+NV+       G LTH FQQ RAAAGDDRR
Sbjct: 184 DRDHQHQQQ---MMIRSFDAGNNYDASLLAMNVSAAAGGIHGQLTHQFQQPRAAAGDDRR 243

[Close]
BLAST of CmaCh05G007420 vs. TrEMBL
Match: W9S4E0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003750 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-68
Identity = 151/230 (65.65%), Postives = 168/230 (73.04%), Query Frame = 1 

Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQMDLT AKSELSKY++LG+   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSKYQSLGLVTA 120

Query: 121 ---------AALISSPSSLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMM 180
                      +       +A R+H   ++      H   + QFFPRDQ       QQ M
Sbjct: 121 HHHHQNVGINLIGGGGGGASAARDHHGHYH----HHHGGAHYQFFPRDQAAAAAAAQQ-M 180

Query: 181 LRRNFDGGT-NYD---GLLAVNVTVGNLTHPFQQSRAAAGDDRRGTLDHS 218
           +R  FD  T NYD   GL +   ++G L+  FQQSRAAAGDDRR T+D S
Sbjct: 181 IRSTFDAATANYDAASGLFSAAASIGQLSQ-FQQSRAAAGDDRRTTIDPS 224

[Close]
BLAST of CmaCh05G007420 vs. TrEMBL
Match: A7L4B2_CARPA (Asymmetric leaves 2 OS=Carica papaya PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.8e-68
Identity = 148/215 (68.84%), Postives = 165/215 (76.74%), Query Frame = 1 

Query: 3   STSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR 62
           ++SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP QR
Sbjct: 2   ASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQR 61

Query: 63  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPAA 122
           EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQMDL+ AKSELSKY+ LGI + A 
Sbjct: 62  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKSELSKYQNLGITSHAG 121

Query: 123 LISSPSSLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMMLRRNFDGGTNY 182
           LI++ ++  A  NH      G  + H   + QFFPRD    QQQ    MLR  F+    Y
Sbjct: 122 LIAAAAA--ASHNHHQNIGGGAVRDHHY-HHQFFPRDHHHHQQQ----MLRTTFEAAGGY 181

Query: 183 DGLLAVNVTVGNLTHPFQQSRAAAGDDRRGTLDHS 218
           DG  A  + +G L+  FQ SRAAAGDDRR T+D S
Sbjct: 182 DG--ASLLAIGQLSQ-FQPSRAAAGDDRR-TIDPS 205

[Close]
BLAST of CmaCh05G007420 vs. TrEMBL
Match: A0A059CS33_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02148 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.8e-68
Identity = 144/217 (66.36%), Postives = 161/217 (74.19%), Query Frame = 1 

Query: 3   STSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR 62
           ++SS SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR
Sbjct: 2   ASSSTSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR 61

Query: 63  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPAA 122
           EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQMDLT AKSELSKY++LG+     
Sbjct: 62  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSKYQSLGLAAGHG 121

Query: 123 LISSPSSLTAQRNHQPTFNF-----GRDQPHSLCYDQFFPRDQQQQQQQQQQMMLRRNFD 182
           LI++ ++     NH              + H   + QFFPRD Q Q        + R FD
Sbjct: 122 LIAAAAAAATTHNHPQNLGINLLGPASSRDHHHYHHQFFPRDHQHQ--------MIRGFD 181

Query: 183 GGTNYD-GLLAVNV--TVGNLTHPFQQSRAAAGDDRR 212
            G+NYD  LLA+NV  ++G L   F Q RAAAGDDRR
Sbjct: 182 AGSNYDASLLAMNVSASIGQLGQ-FHQPRAAAGDDRR 209

[Close]
BLAST of CmaCh05G007420 vs. TAIR10
Match: AT1G65620.1 (AT1G65620.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 247.7 bits (631), Expect = 6.7e-66
Identity = 142/217 (65.44%), Postives = 157/217 (72.35%), Query Frame = 1 

Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+ AKSELSKY++LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI--L 120

Query: 121 AALISSPSSLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMMLRRNFDGGT 180
           AA   S            T    RD  H   + QFFPR+Q         M    +   G 
Sbjct: 121 AATHQSLGINLLAGAADGTATAVRDHYH---HHQFFPREQ---------MFGGLDVPAGN 180

Query: 181 NYDGLLAVNVTVGNLTHPFQQSRAAAGDDRRGTLDHS 218
           NYDG +   + +G +T  FQQ RAAAGDD R T+D S
Sbjct: 181 NYDGGI---LAIGQITQ-FQQPRAAAGDDGRRTVDPS 199

[Close]
BLAST of CmaCh05G007420 vs. TAIR10
Match: AT5G63090.2 (AT5G63090.2 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 181.4 bits (459), Expect = 5.9e-46
Identity = 89/138 (64.49%), Postives = 106/138 (76.81%), Query Frame = 1 

Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           +S S NSPCAACKFLRRKC P C+FAPYFPP++P KFANVHK+FGASNVTKLLNEL PHQ
Sbjct: 4   SSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQ 63

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKY----KTLGI 121
           REDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+ +LQ +L +A ++L+ Y       G 
Sbjct: 64  REDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAGA 123

Query: 122 -GNPAALISSPSSLTAQR 135
            GN   L+  P  L +Q+
Sbjct: 124 PGNVVDLVFQPQPLPSQQ 141

[Close]
BLAST of CmaCh05G007420 vs. TAIR10
Match: AT5G66870.1 (AT5G66870.1 ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 174.1 bits (440), Expect = 9.4e-44
Identity = 100/169 (59.17%), Postives = 116/169 (68.64%), Query Frame = 1 

Query: 5   SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQRED 64
           SS+SPCAACKFLRRKC  ECVFAPYFPPDQPQKFA VHKVFGASNV KLLNEL  +QRED
Sbjct: 3   SSSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQRED 62

Query: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPAAL- 124
           AVNSL YEA+ RLRDPVYGCVG+IS+LQH+L ++  DL +AK EL+ Y    +G  A L 
Sbjct: 63  AVNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY----VGPQAMLP 122

Query: 125 ISSPSSLT----AQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQ 169
           I  P  ++     QR    + +      H+L      P  Q   QQQQQ
Sbjct: 123 ILQPHFMSLPPQPQRPSSSSASVLTQHHHNLLPMMAIPTGQLYHQQQQQ 167

[Close]
BLAST of CmaCh05G007420 vs. TAIR10
Match: AT3G27650.1 (AT3G27650.1 LOB domain-containing protein 25)

HSP 1 Score: 169.9 bits (429), Expect = 1.8e-42
Identity = 75/110 (68.18%), Postives = 94/110 (85.45%), Query Frame = 1 

Query: 3   STSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQR 62
           S  +NSPCAACKFLRRKC  +CVFAPYFPP++P KFANVH++FGASNV+K+L+E+ PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 63  EDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKY 113
           EDAVNSLAYEA+ RL+DPVYGCVG IS+LQ Q+ +LQ +L    ++L +Y
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRY 142

[Close]
BLAST of CmaCh05G007420 vs. TAIR10
Match: AT2G23660.1 (AT2G23660.1 LOB domain-containing protein 10)

HSP 1 Score: 162.2 bits (409), Expect = 3.7e-40
Identity = 81/135 (60.00%), Postives = 95/135 (70.37%), Query Frame = 1 

Query: 6   SNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDA 65
           +++PCAACK LRRKC  ECVFAPYFPP  PQKF  VH+VFGASNVTK+LN+L P QRED 
Sbjct: 2   ASTPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDT 61

Query: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPAALIS 125
           VNSL YEA+ R+RDP+YGCVG+IS LQ  L K+Q DL +AK EL     +G   P A+I 
Sbjct: 62  VNSLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEEL-----VGYLGPDAVIP 121

Query: 126 SPSSLTAQRNHQPTF 141
            P       N  P F
Sbjct: 122 PPYLPPIGNNPPPNF 131

[Close]
BLAST of CmaCh05G007420 vs. NCBI nr
Match: gi|659082586|ref|XP_008441920.1| (PREDICTED: LOB domain-containing protein 6 [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 3.4e-104
Identity = 195/223 (87.44%), Postives = 204/223 (91.48%), Query Frame = 1 

Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLT AKSELSKY+ LGIGN 
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 AALISSPSSLT----AQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMMLRRNF 180
           A LIS PS+L+     QRNHQP FNF RDQPHSL +DQFFPRD   QQQQQQQMMLRRNF
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD---QQQQQQQMMLRRNF 180

Query: 181 DGGTNYDGLLAVNVT--VGNLTHPFQQSRAAAGDDRRGTLDHS 218
           DGG+NYDGLLAVNVT  +GNL+H FQQ+RAAAGDDRRGTLDHS
Sbjct: 181 DGGSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 220

[Close]
BLAST of CmaCh05G007420 vs. NCBI nr
Match: gi|449470364|ref|XP_004152887.1| (PREDICTED: LOB domain-containing protein 6 [Cucumis sativus])

HSP 1 Score: 380.6 bits (976), Expect = 1.9e-102
Identity = 192/223 (86.10%), Postives = 201/223 (90.13%), Query Frame = 1 

Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLT AKSELSKY+ LGIGN 
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 AALISSPSSLT----AQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMMLRRNF 180
           A LIS PS+L+     QRNHQP FNF RDQPHSL +DQFFPRD     QQQ QMMLRRNF
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD-----QQQPQMMLRRNF 180

Query: 181 DGGTNYDGLLAVNVT--VGNLTHPFQQSRAAAGDDRRGTLDHS 218
           DGG+NYDGLLAVNVT  +GNL+H FQQ+RAAAGDDRRGTLDHS
Sbjct: 181 DGGSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 218

[Close]
BLAST of CmaCh05G007420 vs. NCBI nr
Match: gi|645223256|ref|XP_008218544.1| (PREDICTED: LOB domain-containing protein 6 [Prunus mume])

HSP 1 Score: 273.1 bits (697), Expect = 4.2e-70
Identity = 158/249 (63.45%), Postives = 177/249 (71.08%), Query Frame = 1 

Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           +S+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ
Sbjct: 5   SSSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 64

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPA 121
           REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQMDLT AKSELSKY+ L  G  A
Sbjct: 65  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSKYQNLQHGLTA 124

Query: 122 A--LISSPSSLTAQRNHQP--------TFNFGRDQPHSLCY----------------DQF 181
           +  LI++ ++  A   H P        T +   +  ++L                   QF
Sbjct: 125 SHGLIAAAAAAAAAHTHHPLHLQSSSSTLHNNNNNNNNLGMGINLISGGGGGRDHYPHQF 184

Query: 182 FPRDQQQQQQQQQQMMLRRNFDGGTNYD-GLLAVNVTV------GNLTHPFQQSRAAAGD 218
           FPRD+  Q QQQ   M+ R+FD G NYD  LLA+NV+       G LTH FQQ RAAAGD
Sbjct: 185 FPRDRDHQHQQQ---MMIRSFDAGNNYDASLLAMNVSAAAGGIHGQLTHQFQQPRAAAGD 244

[Close]
BLAST of CmaCh05G007420 vs. NCBI nr
Match: gi|595834307|ref|XP_007206843.1| (hypothetical protein PRUPE_ppa027059mg [Prunus persica])

HSP 1 Score: 270.8 bits (691), Expect = 2.1e-69
Identity = 158/246 (64.23%), Postives = 174/246 (70.73%), Query Frame = 1 

Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           +S+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ
Sbjct: 4   SSSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 63

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPA 121
           REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQMDLT AKSELSKY+ L  G  A
Sbjct: 64  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSKYQNLQHGLTA 123

Query: 122 A--LISSPSSLTAQRNHQPTF-----------NFGRDQPHSLCY----------DQFFPR 181
           +  LI++ ++  A   H P             N       +L             QFFPR
Sbjct: 124 SHGLIAAAAAAAAAHTHHPLHLQSSSSTLHNNNNNLGMGINLISGGGGGRDHYPHQFFPR 183

Query: 182 DQQQQQQQQQQMMLRRNFDGGTNYD-GLLAVNVTV------GNLTHPFQQSRAAAGDDRR 218
           D+  Q QQQ   M+ R+FD G NYD  LLA+NV+       G LTH FQQ RAAAGDDRR
Sbjct: 184 DRDHQHQQQ---MMIRSFDAGNNYDASLLAMNVSAAAGGIHGQLTHQFQQPRAAAGDDRR 243

[Close]
BLAST of CmaCh05G007420 vs. NCBI nr
Match: gi|703151548|ref|XP_010110147.1| (hypothetical protein L484_003750 [Morus notabilis])

HSP 1 Score: 267.3 bits (682), Expect = 2.3e-68
Identity = 151/230 (65.65%), Postives = 168/230 (73.04%), Query Frame = 1 

Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQMDLT AKSELSKY++LG+   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSKYQSLGLVTA 120

Query: 121 ---------AALISSPSSLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMM 180
                      +       +A R+H   ++      H   + QFFPRDQ       QQ M
Sbjct: 121 HHHHQNVGINLIGGGGGGASAARDHHGHYH----HHHGGAHYQFFPRDQAAAAAAAQQ-M 180

Query: 181 LRRNFDGGT-NYD---GLLAVNVTVGNLTHPFQQSRAAAGDDRRGTLDHS 218
           +R  FD  T NYD   GL +   ++G L+  FQQSRAAAGDDRR T+D S
Sbjct: 181 IRSTFDAATANYDAASGLFSAAASIGQLSQ-FQQSRAAAGDDRRTTIDPS 224

The following BLAST results are available for this feature:
BLAST of CmaCh05G007420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD6_ARATH1.2e-6465.44LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1[more]
LBD6_MAIZE3.5e-4858.38LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1[more]
LBD6_ORYSI3.5e-4873.60LOB domain-containing protein 6 OS=Oryza sativa subsp. indica GN=LBD6 PE=3 SV=1[more]
LBD6_ORYSJ3.5e-4873.60LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=LBD6 PE=2 SV=... [more]
IAL1_MAIZE1.1e-4655.80Protein IAL1 OS=Zea mays PE=2 SV=1[more]
BLAST of CmaCh05G007420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LML7_CUCSA1.3e-10286.10Uncharacterized protein OS=Cucumis sativus GN=Csa_2G070920 PE=4 SV=1[more]
M5W2T3_PRUPE1.5e-6964.23Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa027059mg PE=4 SV=1[more]
W9S4E0_9ROSA1.6e-6865.65Uncharacterized protein OS=Morus notabilis GN=L484_003750 PE=4 SV=1[more]
A7L4B2_CARPA2.8e-6868.84Asymmetric leaves 2 OS=Carica papaya PE=4 SV=1[more]
A0A059CS33_EUCGR2.8e-6866.36Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02148 PE=4 SV=1[more]
BLAST of CmaCh05G007420 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G65620.16.7e-6665.44 Lateral organ boundaries (LOB) domain family protein[more]
AT5G63090.25.9e-4664.49 Lateral organ boundaries (LOB) domain family protein[more]
AT5G66870.19.4e-4459.17 ASYMMETRIC LEAVES 2-like 1[more]
AT3G27650.11.8e-4268.18 LOB domain-containing protein 25[more]
AT2G23660.13.7e-4060.00 LOB domain-containing protein 10[more]
BLAST of CmaCh05G007420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082586|ref|XP_008441920.1|3.4e-10487.44PREDICTED: LOB domain-containing protein 6 [Cucumis melo][more]
gi|449470364|ref|XP_004152887.1|1.9e-10286.10PREDICTED: LOB domain-containing protein 6 [Cucumis sativus][more]
gi|645223256|ref|XP_008218544.1|4.2e-7063.45PREDICTED: LOB domain-containing protein 6 [Prunus mume][more]
gi|595834307|ref|XP_007206843.1|2.1e-6964.23hypothetical protein PRUPE_ppa027059mg [Prunus persica][more]
gi|703151548|ref|XP_010110147.1|2.3e-6865.65hypothetical protein L484_003750 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009943 adaxial/abaxial axis specification
biological_process GO:0048441 petal development
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0009954 proximal/distal pattern formation
biological_process GO:0009799 specification of symmetry
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G007420.1CmaCh05G007420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 9..106
score: 3.6
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 8..109
score: 27
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 3..172
score: 2.0
NoneNo IPR availablePANTHERPTHR31301:SF5LOB DOMAIN-CONTAINING PROTEIN 10-RELATEDcoord: 3..172
score: 2.0