CsaV3_2G005080 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G005080
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionE3 ubiquitin-protein ligase ATL6
Locationchr2 : 2774605 .. 2775744 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCTCTCTCACCGCCCCCCATGGCCTTCCTCTCTTCCTCCTCCTCTTCCTCTTCCTCTTCTCCTCCGTCTCCGCCCAGTCCCAGCCCTCCCCCGACCCCAGGTCAGACCCTTACCAGTACCGCCTCAGCGGTTCCATGGCCGTCATCATCGTCATCCTCATCGCCGCCCTTTTCTTCATGGCTTTCTTCTCCGTCTACATCCGTCACTGCAACGATTCACAATCCAACACCATCCGCCCTATCACCGTAGCCGCCGGCCGCTCCCGTCGCGCAACCCGCGGTCTCGATCCGGCGGTAATTGAAACATTTCCGACTCTGATTTACTCCGATGTGAAAGAGCATAAAATTGGTAAAAGTGCCCTAGAATGCGCTGTTTGTTTGAATGAATTTGAAGATGATGAAACGCTGCGTTTGATCCCTAAATGTGACCATGTGTTTCACCCTGAATGTATTGATGCTTGGTTGGCTTCTCACTCTACTTGCCCTGTTTGTCGAGCTAATTTGTCTCCTCAACTCACTGAGTCCGTCCACCGAGTTGACGATTCCAACGCTGTGGTTAACTCGGATACTGACGGAGGTGATATTGAAGCTCAGTCCACTGACGTCGTTTTAGAGACAACGGCTCCACCTACGGTTCAGATACAAACGGAATCAGAGCTCACTACCACGACAGGTAACAAGGCCTTGAATCGGACACGTACACGAGGATCCCGATCCAATAGATTGCGGTGGCTATTTCCCCGGTCTCACTCGACCGGACACTCCTTGGTTCAGCCTGGGGAAGACACTGAGCGGTTTACTCTCCGGTTGCCAGTGGAGATAAGAAAGCAAGTTGTGAACCGGAAGCTGAACCGGGCGATGAGTATGGTGGTTTTGGCCAGGCAGAGCAGTTCGATGAGAGGATACAGGTTTGGTTCAGGTGAAGGGAGTAGTCGAGGGAAGTATTACCGGAGGCTCGAGCGGTTGGACCGAACATCGAAGTCGGACCGGTGGGTGTTGTCAATGACACCGCCGTTTTTCACGCGTATGTCGTCGATGAAGACTCCACGTGGAGGGAGTAACCGCGGTGAACCCGGTTCGGGCCGAGAACTTGGACAGGGAAATACCGCTGTCGAATCAAGTATGCTTCCGGTCTGA

mRNA sequence

ATGCCCTCTCTCACCGCCCCCCATGGCCTTCCTCTCTTCCTCCTCCTCTTCCTCTTCCTCTTCTCCTCCGTCTCCGCCCAGTCCCAGCCCTCCCCCGACCCCAGGTCAGACCCTTACCAGTACCGCCTCAGCGGTTCCATGGCCGTCATCATCGTCATCCTCATCGCCGCCCTTTTCTTCATGGCTTTCTTCTCCGTCTACATCCGTCACTGCAACGATTCACAATCCAACACCATCCGCCCTATCACCGTAGCCGCCGGCCGCTCCCGTCGCGCAACCCGCGGTCTCGATCCGGCGGTAATTGAAACATTTCCGACTCTGATTTACTCCGATGTGAAAGAGCATAAAATTGGTAAAAGTGCCCTAGAATGCGCTGTTTGTTTGAATGAATTTGAAGATGATGAAACGCTGCGTTTGATCCCTAAATGTGACCATGTGTTTCACCCTGAATGTATTGATGCTTGGTTGGCTTCTCACTCTACTTGCCCTGTTTGTCGAGCTAATTTGTCTCCTCAACTCACTGAGTCCGTCCACCGAGTTGACGATTCCAACGCTGTGGTTAACTCGGATACTGACGGAGGTGATATTGAAGCTCAGTCCACTGACGTCGTTTTAGAGACAACGGCTCCACCTACGGTTCAGATACAAACGGAATCAGAGCTCACTACCACGACAGGTAACAAGGCCTTGAATCGGACACGTACACGAGGATCCCGATCCAATAGATTGCGGTGGCTATTTCCCCGGTCTCACTCGACCGGACACTCCTTGGTTCAGCCTGGGGAAGACACTGAGCGGTTTACTCTCCGGTTGCCAGTGGAGATAAGAAAGCAAGTTGTGAACCGGAAGCTGAACCGGGCGATGAGTATGGTGGTTTTGGCCAGGCAGAGCAGTTCGATGAGAGGATACAGGTTTGGTTCAGGTGAAGGGAGTAGTCGAGGGAAGTATTACCGGAGGCTCGAGCGGTTGGACCGAACATCGAAGTCGGACCGGTGGGTGTTGTCAATGACACCGCCGTTTTTCACGCGTATGTCGTCGATGAAGACTCCACGTGGAGGGAGTAACCGCGGTGAACCCGGTTCGGGCCGAGAACTTGGACAGGGAAATACCGCTGTCGAATCAAGTATGCTTCCGGTCTGA

Coding sequence (CDS)

ATGCCCTCTCTCACCGCCCCCCATGGCCTTCCTCTCTTCCTCCTCCTCTTCCTCTTCCTCTTCTCCTCCGTCTCCGCCCAGTCCCAGCCCTCCCCCGACCCCAGGTCAGACCCTTACCAGTACCGCCTCAGCGGTTCCATGGCCGTCATCATCGTCATCCTCATCGCCGCCCTTTTCTTCATGGCTTTCTTCTCCGTCTACATCCGTCACTGCAACGATTCACAATCCAACACCATCCGCCCTATCACCGTAGCCGCCGGCCGCTCCCGTCGCGCAACCCGCGGTCTCGATCCGGCGGTAATTGAAACATTTCCGACTCTGATTTACTCCGATGTGAAAGAGCATAAAATTGGTAAAAGTGCCCTAGAATGCGCTGTTTGTTTGAATGAATTTGAAGATGATGAAACGCTGCGTTTGATCCCTAAATGTGACCATGTGTTTCACCCTGAATGTATTGATGCTTGGTTGGCTTCTCACTCTACTTGCCCTGTTTGTCGAGCTAATTTGTCTCCTCAACTCACTGAGTCCGTCCACCGAGTTGACGATTCCAACGCTGTGGTTAACTCGGATACTGACGGAGGTGATATTGAAGCTCAGTCCACTGACGTCGTTTTAGAGACAACGGCTCCACCTACGGTTCAGATACAAACGGAATCAGAGCTCACTACCACGACAGGTAACAAGGCCTTGAATCGGACACGTACACGAGGATCCCGATCCAATAGATTGCGGTGGCTATTTCCCCGGTCTCACTCGACCGGACACTCCTTGGTTCAGCCTGGGGAAGACACTGAGCGGTTTACTCTCCGGTTGCCAGTGGAGATAAGAAAGCAAGTTGTGAACCGGAAGCTGAACCGGGCGATGAGTATGGTGGTTTTGGCCAGGCAGAGCAGTTCGATGAGAGGATACAGGTTTGGTTCAGGTGAAGGGAGTAGTCGAGGGAAGTATTACCGGAGGCTCGAGCGGTTGGACCGAACATCGAAGTCGGACCGGTGGGTGTTGTCAATGACACCGCCGTTTTTCACGCGTATGTCGTCGATGAAGACTCCACGTGGAGGGAGTAACCGCGGTGAACCCGGTTCGGGCCGAGAACTTGGACAGGGAAATACCGCTGTCGAATCAAGTATGCTTCCGGTCTGA

Protein sequence

MPSLTAPHGLPLFLLLFLFLFSSVSAQSQPSPDPRSDPYQYRLSGSMAVIIVILIAALFFMAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPGSGRELGQGNTAVESSMLPV
Homology
[Close]
BLAST of CsaV3_2G005080 vs. NCBI nr
Match: XP_004139190.1 (PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis sativus])

HSP 1 Score: 646.4 bits (1666), Expect = 6.2e-182
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0 

Query: 1   MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 60
           MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF
Sbjct: 1   MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 61  MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180

Query: 181 DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS 240
           DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG
Sbjct: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG 360

Query: 361 SGRELGQGNTAVESSMLPV 380
           SGRELGQGNTAVESSMLPV
Sbjct: 361 SGRELGQGNTAVESSMLPV 379

[Close]
BLAST of CsaV3_2G005080 vs. NCBI nr
Match: KGN60885.1 (hypothetical protein Csa_2G021560 [Cucumis sativus])

HSP 1 Score: 646.4 bits (1666), Expect = 6.2e-182
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0 

Query: 1   MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 60
           MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF
Sbjct: 97  MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 156

Query: 61  MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 157 MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 216

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV
Sbjct: 217 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 276

Query: 181 DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS 240
           DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS
Sbjct: 277 DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS 336

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM
Sbjct: 337 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM 396

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG
Sbjct: 397 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG 456

Query: 361 SGRELGQGNTAVESSMLPV 380
           SGRELGQGNTAVESSMLPV
Sbjct: 457 SGRELGQGNTAVESSMLPV 475

[Close]
BLAST of CsaV3_2G005080 vs. NCBI nr
Match: XP_008454907.2 (PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis melo] >AAO45753.1 RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 595.9 bits (1535), Expect = 9.7e-167
Identity = 354/379 (93.40%), Postives = 358/379 (94.46%), Query Frame = 0 

Query: 1   MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 60
           MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF
Sbjct: 1   MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDS SNT+RPIT AAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T+SVHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS 240
           DDSNAVVNSDTDGGDIEAQS DVV ETTAPPTVQ            NKALNRTRTRGSRS
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETTAPPTVQXXXXXXXXXXXSNKALNRTRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RA SMVVLARQSSSM
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQSSSM 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR EPG
Sbjct: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRAEPG 360

Query: 361 SGRELGQGNTAVESSMLPV 380
           SGRELGQGNTAV+SS LPV
Sbjct: 361 SGRELGQGNTAVDSSRLPV 379

[Close]
BLAST of CsaV3_2G005080 vs. NCBI nr
Match: XP_022946284.1 (E3 ubiquitin-protein ligase ATL6-like [Cucurbita moschata])

HSP 1 Score: 552.0 bits (1421), Expect = 1.6e-153
Identity = 282/327 (86.24%), Postives = 300/327 (91.74%), Query Frame = 0 

Query: 57  ALFFMAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHK 116
           ALFF+AFFSVY+RHCNDSQSN++RP+T AA RSRRA RGLDPAVIETFPTLIYSDVK+HK
Sbjct: 54  ALFFVAFFSVYLRHCNDSQSNSVRPVT-AAARSRRAARGLDPAVIETFPTLIYSDVKQHK 113

Query: 117 IGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTES 176
           IGKS LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRANLSPQLTES
Sbjct: 114 IGKSTLECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTES 173

Query: 177 VHRVDDSNAVVNSDTDGGDIEAQSTDVVLE---TTAPPTVQIQTESEL-TTTTGNKALNR 236
           VHRV+DS AVV+SD + GDIEAQ+ DVV E   T APP +QI  ESEL TTT  NK+LNR
Sbjct: 174 VHRVEDSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPAESELNTTTAANKSLNR 233

Query: 237 TRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVV 296
            RTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLP+EIRKQVVNRKLNRA SMV+
Sbjct: 234 NRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVI 293

Query: 297 LARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRG 356
           LARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRG
Sbjct: 294 LARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRG 353

Query: 357 GSNRGEPGSGRELGQGNTAVESSMLPV 380
           GS  GEPG GRELGQG++  ESS LPV
Sbjct: 354 GSIHGEPGLGRELGQGSSTAESSRLPV 379

[Close]
BLAST of CsaV3_2G005080 vs. NCBI nr
Match: XP_023545580.1 (E3 ubiquitin-protein ligase ATL6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.0 bits (1421), Expect = 1.6e-153
Identity = 282/327 (86.24%), Postives = 300/327 (91.74%), Query Frame = 0 

Query: 57  ALFFMAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHK 116
           ALFF+AFFSVY+RHCNDSQSN++RP+T AA RSRRA RGLDPAVIETFPTLIYSDVK+HK
Sbjct: 52  ALFFVAFFSVYLRHCNDSQSNSVRPVT-AAARSRRAARGLDPAVIETFPTLIYSDVKQHK 111

Query: 117 IGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTES 176
           IGKS LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRANLSPQLTES
Sbjct: 112 IGKSTLECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHTTCPVCRANLSPQLTES 171

Query: 177 VHRVDDSNAVVNSDTDGGDIEAQSTDVVLE---TTAPPTVQIQTESEL-TTTTGNKALNR 236
           VHRV+DS AVV+SD + GDIEAQ+ DVV E   T APP +QI  ESEL TTT  NK+LNR
Sbjct: 172 VHRVEDSAAVVDSDENRGDIEAQNNDVVSETNPTAAPPPIQIPVESELNTTTAANKSLNR 231

Query: 237 TRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVV 296
            RTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLP+EIRKQVVNRKLNRA SMV+
Sbjct: 232 NRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPLEIRKQVVNRKLNRATSMVI 291

Query: 297 LARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRG 356
           LARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRG
Sbjct: 292 LARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRG 351

Query: 357 GSNRGEPGSGRELGQGNTAVESSMLPV 380
           GS  GEPG GRELGQG++  ESS LPV
Sbjct: 352 GSIHGEPGLGRELGQGSSTAESSRLPV 377

[Close]
BLAST of CsaV3_2G005080 vs. TAIR10
Match: AT3G05200.1 (RING/U-box superfamily protein)

HSP 1 Score: 228.4 bits (581), Expect = 7.4e-60
Identity = 145/324 (44.75%), Postives = 184/324 (56.79%), Query Frame = 0 

Query: 57  ALFFMAFFSVYIRHCNDSQSNTIRPITVAAGRS--RRATRGLDPAVIETFPTLIYSDVKE 116
           ALFFM FFS+Y RHC+      + P   A  R+    A RGLD +V+ETFPT +YSDVK 
Sbjct: 59  ALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKT 118

Query: 117 HKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLT 176
            K+GK  LECA+CLNEFEDDETLRL+PKCDHVFHP CIDAWL +H TCPVCRANL+ Q+ 
Sbjct: 119 QKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVA 178

Query: 177 ESVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTR 236
           E         +V    T+  D+E Q   V  E    P V      +L T+     ++  R
Sbjct: 179 E-------GESVEPGGTE-PDLELQQVVVNPE----PVVTAPVPEQLVTS----EVDSRR 238

Query: 237 TRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVV-NRKLNRAMSMVVL 296
             G   +  R  F RSH+TGHS+VQPGE TERFTLRLP ++RK+++ + KLNR  S++VL
Sbjct: 239 LPGVPVDLKRVKFSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVL 298

Query: 297 ARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRT-SKSDRWVLSMTPPFFTRMSSMKTPRG 356
            R  SS RG                  + +DR+ ++SDRW+   TP F  R        G
Sbjct: 299 PRGGSSRRG------------------KPIDRSRARSDRWLFRKTPSFLWR----SRDDG 344

Query: 357 GSNRGEPGSGRELGQGNTAVESSM 377
               G  GS R     N+    S+
Sbjct: 359 SIRLGATGSVRASAVPNSTGSDSV 344

[Close]
BLAST of CsaV3_2G005080 vs. TAIR10
Match: AT5G27420.1 (carbon/nitrogen insensitive 1)

HSP 1 Score: 218.8 bits (556), Expect = 5.8e-57
Identity = 137/305 (44.92%), Postives = 168/305 (55.08%), Query Frame = 0 

Query: 60  FMAFFSVYIRHCNDSQSNTIRPITVAAGRSRRAT--RGLDPAVIETFPTLIYSDVKEHKI 119
           FM FF+VYIRHC  +   ++ P   A  R   AT  RGLD   IETFPT +YS+VK  KI
Sbjct: 58  FMGFFTVYIRHCTGAVDGSVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKI 117

Query: 120 GKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESV 179
           GK ALECA+CLNEFEDDETLRL+PKCDHVFHP CI AWL  H TCPVCR NL+ Q  E  
Sbjct: 118 GKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPE-- 177

Query: 180 HRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRG 239
                   VV +     D+EAQ    V      P V++                      
Sbjct: 178 -----PEVVVET-----DLEAQQQSAV----PVPVVELP--------------------- 237

Query: 240 SRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVV-NRKLNRAMSMVVLARQ 299
                 R  FPRSH+TGHS+V PGE T+RFTLR+P E+RK+++ N KLNR+ S+ VL R 
Sbjct: 238 ------RVKFPRSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRG 297

Query: 300 SSSMRGYRFGSGEGSSRGKYYRRLERLDRT-SKSDRWVLSMTPPFFTRM---SSMKTPRG 358
            SS  G                  +++DR+ +KSDRW+   TP F  R     S++    
Sbjct: 298 GSSRSG------------------KQVDRSRAKSDRWLFRKTPSFLWRNRDDGSIRLGGT 301

[Close]
BLAST of CsaV3_2G005080 vs. TAIR10
Match: AT1G72200.1 (RING/U-box superfamily protein)

HSP 1 Score: 190.3 bits (482), Expect = 2.2e-48
Identity = 133/314 (42.36%), Postives = 172/314 (54.78%), Query Frame = 0 

Query: 59  FFMAFFSVYIRHCNDSQSNTIRPITVAAGR----SRRATRGLDPAVIETFPTLIYSDVKE 118
           FF+ FFSVYIR C +            AG     +R+  RGLD ++IETFPT  YS VK 
Sbjct: 75  FFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKT 134

Query: 119 HKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLT 178
            +IGK ALEC+VCLNEFEDDETLRLIPKC HVFHP CIDAWL SH+TCP+CRA+L P   
Sbjct: 135 LRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPG 194

Query: 179 ESVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTR 238
           ES+  +     V  +D  G D         + +   P  ++     LT        N++ 
Sbjct: 195 ESIVSIQIPGLV--NDPPGSDPNGDR----IRSLGSPDARLIESVALT-------CNQSM 254

Query: 239 TRGSRSN--RLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVV 298
            R S S    L  +F  S  TG    Q  E+ +RFTLRLP +I  ++VN  L++    V 
Sbjct: 255 PRRSMSTGWNLAGMFTNSDRTG----QHSENLDRFTLRLPQDIHNKLVNPNLSKV--HVA 314

Query: 299 LARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRG 358
           L +  SS RGYR GS  GS R  +Y   ER D+  + DR   S+TPP+ T   +  +P G
Sbjct: 315 LPQVMSSTRGYRTGS-LGSERNYFY--YERFDQDGRLDRRPFSITPPYRTSSINHMSPGG 366

Query: 359 -GSNRGEPGSGREL 366
            G ++    S + L
Sbjct: 375 SGGDKVRASSPKSL 366

[Close]
BLAST of CsaV3_2G005080 vs. TAIR10
Match: AT1G22500.1 (RING/U-box superfamily protein)

HSP 1 Score: 175.3 bits (443), Expect = 7.4e-44
Identity = 123/301 (40.86%), Postives = 163/301 (54.15%), Query Frame = 0 

Query: 59  FFMAFFSVYIRHC------NDSQSNTIRPITVAAGRSRRATR-GLDPAVIETFPTLIYSD 118
           F +   SVY+R C       DS       + V     R+ T  GLD +VIETFPT  YS 
Sbjct: 51  FALGCISVYMRRCLQHALGMDSGGGPGNWLNV-----RQTTEPGLDASVIETFPTFPYST 110

Query: 119 VKEHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSP 178
           VK  +IGK ALEC VCLNEFEDDETLRLIP+C HVFHP CIDAWL S +TCP+CRANL P
Sbjct: 111 VKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVP 170

Query: 179 QLTESVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALN 238
              ESV       A    +T    +     D        P  ++    +    TGN+++ 
Sbjct: 171 VPGESVSSEIPGLA---RETGQNSLRTPIDDNRKRVLTSPDERL---IDSVAWTGNQSMP 230

Query: 239 RTRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNR--AMS 298
           R      +S    W     +S   S  QP E+ +R+TLRLP EI  Q+VN  L +  +  
Sbjct: 231 R------KSMSTGWKLAELYSPASSPGQPEENLDRYTLRLPQEIHDQLVNSSLGKQGSKG 290

Query: 299 MVVLARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKT 351
            + L ++ SS+RG+R GS  G+ +  +Y   ER D+  + DR   S+TPP+ TR  S+++
Sbjct: 291 QLALPQERSSVRGFRTGS-LGTEKNYFY--FERFDQDGRLDRRPFSITPPYHTR--SIQS 329

[Close]
BLAST of CsaV3_2G005080 vs. TAIR10
Match: AT2G35000.1 (RING/U-box superfamily protein)

HSP 1 Score: 175.3 bits (443), Expect = 7.4e-44
Identity = 130/305 (42.62%), Postives = 178/305 (58.36%), Query Frame = 0 

Query: 63  FFSVYIRHCND--SQSNTIRPITVAAG----RSRRAT-RGLDPAVIETFPTLIYSDVKEH 122
           F S++ R  N   S+S+  R     A     R RR T RGLD   IETFPT +YS+VK  
Sbjct: 67  FGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAV 126

Query: 123 KIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTE 182
           +IGK  +ECAVCL EFEDDETLRL+P C HVFH +C+D WL+ HSTCP+CRA+    L  
Sbjct: 127 RIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRAD----LVL 186

Query: 183 SVHRVDDSNAVVNSDTDGGDIEAQSTD----VVLETTAPPTVQIQTESELTTTTGNKALN 242
           +    DD +    S TD G I + STD    +VLE++    +   T S    T       
Sbjct: 187 NQQGDDDDSTESYSGTDPGTI-SSSTDPERGMVLESSDAHLLDAVTWSNSNITP------ 246

Query: 243 RTRTRGSRSNRLRW-LFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSM 302
           R+++ G  S ++   LFPRSHSTGHSL+QP  + +RFTLRLP ++R+Q++  K +R M  
Sbjct: 247 RSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM--KTSRTMGH 306

Query: 303 VVLARQSSSMR-GYRFGSGEGSSRGKY-YRRLERLDRTSKSDRWVLSMTPPFFTRMSSMK 354
           V L  Q+ S R GYR GS  GS R  + Y R     +++ ++R + S++  F  R  S++
Sbjct: 307 VALLPQARSSRSGYRSGS-VGSERSAFPYGR-----KSNNNNRRLHSLSFSFSFRSGSVR 352

[Close]
BLAST of CsaV3_2G005080 vs. Swiss-Prot
Match: sp|Q8RXX9|ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-58
Identity = 145/324 (44.75%), Postives = 184/324 (56.79%), Query Frame = 0 

Query: 57  ALFFMAFFSVYIRHCNDSQSNTIRPITVAAGRS--RRATRGLDPAVIETFPTLIYSDVKE 116
           ALFFM FFS+Y RHC+      + P   A  R+    A RGLD +V+ETFPT +YSDVK 
Sbjct: 59  ALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKT 118

Query: 117 HKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLT 176
            K+GK  LECA+CLNEFEDDETLRL+PKCDHVFHP CIDAWL +H TCPVCRANL+ Q+ 
Sbjct: 119 QKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVA 178

Query: 177 ESVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTR 236
           E         +V    T+  D+E Q   V  E    P V      +L T+     ++  R
Sbjct: 179 E-------GESVEPGGTE-PDLELQQVVVNPE----PVVTAPVPEQLVTS----EVDSRR 238

Query: 237 TRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVV-NRKLNRAMSMVVL 296
             G   +  R  F RSH+TGHS+VQPGE TERFTLRLP ++RK+++ + KLNR  S++VL
Sbjct: 239 LPGVPVDLKRVKFSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVL 298

Query: 297 ARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRT-SKSDRWVLSMTPPFFTRMSSMKTPRG 356
            R  SS RG                  + +DR+ ++SDRW+   TP F  R        G
Sbjct: 299 PRGGSSRRG------------------KPIDRSRARSDRWLFRKTPSFLWR----SRDDG 344

Query: 357 GSNRGEPGSGRELGQGNTAVESSM 377
               G  GS R     N+    S+
Sbjct: 359 SIRLGATGSVRASAVPNSTGSDSV 344

[Close]
BLAST of CsaV3_2G005080 vs. Swiss-Prot
Match: sp|Q8LGA5|ATL31_ARATH (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-55
Identity = 137/305 (44.92%), Postives = 168/305 (55.08%), Query Frame = 0 

Query: 60  FMAFFSVYIRHCNDSQSNTIRPITVAAGRSRRAT--RGLDPAVIETFPTLIYSDVKEHKI 119
           FM FF+VYIRHC  +   ++ P   A  R   AT  RGLD   IETFPT +YS+VK  KI
Sbjct: 58  FMGFFTVYIRHCTGAVDGSVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKI 117

Query: 120 GKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESV 179
           GK ALECA+CLNEFEDDETLRL+PKCDHVFHP CI AWL  H TCPVCR NL+ Q  E  
Sbjct: 118 GKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPE-- 177

Query: 180 HRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRG 239
                   VV +     D+EAQ    V      P V++                      
Sbjct: 178 -----PEVVVET-----DLEAQQQSAV----PVPVVELP--------------------- 237

Query: 240 SRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVV-NRKLNRAMSMVVLARQ 299
                 R  FPRSH+TGHS+V PGE T+RFTLR+P E+RK+++ N KLNR+ S+ VL R 
Sbjct: 238 ------RVKFPRSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRG 297

Query: 300 SSSMRGYRFGSGEGSSRGKYYRRLERLDRT-SKSDRWVLSMTPPFFTRM---SSMKTPRG 358
            SS  G                  +++DR+ +KSDRW+   TP F  R     S++    
Sbjct: 298 GSSRSG------------------KQVDRSRAKSDRWLFRKTPSFLWRNRDDGSIRLGGT 301

[Close]
BLAST of CsaV3_2G005080 vs. Swiss-Prot
Match: sp|Q84W40|ATL11_ARATH (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 4.0e-47
Identity = 133/314 (42.36%), Postives = 172/314 (54.78%), Query Frame = 0 

Query: 59  FFMAFFSVYIRHCNDSQSNTIRPITVAAGR----SRRATRGLDPAVIETFPTLIYSDVKE 118
           FF+ FFSVYIR C +            AG     +R+  RGLD ++IETFPT  YS VK 
Sbjct: 75  FFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKT 134

Query: 119 HKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLT 178
            +IGK ALEC+VCLNEFEDDETLRLIPKC HVFHP CIDAWL SH+TCP+CRA+L P   
Sbjct: 135 LRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPG 194

Query: 179 ESVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTR 238
           ES+  +     V  +D  G D         + +   P  ++     LT        N++ 
Sbjct: 195 ESIVSIQIPGLV--NDPPGSDPNGDR----IRSLGSPDARLIESVALT-------CNQSM 254

Query: 239 TRGSRSN--RLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVV 298
            R S S    L  +F  S  TG    Q  E+ +RFTLRLP +I  ++VN  L++    V 
Sbjct: 255 PRRSMSTGWNLAGMFTNSDRTG----QHSENLDRFTLRLPQDIHNKLVNPNLSKV--HVA 314

Query: 299 LARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRG 358
           L +  SS RGYR GS  GS R  +Y   ER D+  + DR   S+TPP+ T   +  +P G
Sbjct: 315 LPQVMSSTRGYRTGS-LGSERNYFY--YERFDQDGRLDRRPFSITPPYRTSSINHMSPGG 366

Query: 359 -GSNRGEPGSGREL 366
            G ++    S + L
Sbjct: 375 SGGDKVRASSPKSL 366

[Close]
BLAST of CsaV3_2G005080 vs. Swiss-Prot
Match: sp|Q9SK92|ATL15_ARATH (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.3e-42
Identity = 123/301 (40.86%), Postives = 163/301 (54.15%), Query Frame = 0 

Query: 59  FFMAFFSVYIRHC------NDSQSNTIRPITVAAGRSRRATR-GLDPAVIETFPTLIYSD 118
           F +   SVY+R C       DS       + V     R+ T  GLD +VIETFPT  YS 
Sbjct: 51  FALGCISVYMRRCLQHALGMDSGGGPGNWLNV-----RQTTEPGLDASVIETFPTFPYST 110

Query: 119 VKEHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSP 178
           VK  +IGK ALEC VCLNEFEDDETLRLIP+C HVFHP CIDAWL S +TCP+CRANL P
Sbjct: 111 VKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVP 170

Query: 179 QLTESVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALN 238
              ESV       A    +T    +     D        P  ++    +    TGN+++ 
Sbjct: 171 VPGESVSSEIPGLA---RETGQNSLRTPIDDNRKRVLTSPDERL---IDSVAWTGNQSMP 230

Query: 239 RTRTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNR--AMS 298
           R      +S    W     +S   S  QP E+ +R+TLRLP EI  Q+VN  L +  +  
Sbjct: 231 R------KSMSTGWKLAELYSPASSPGQPEENLDRYTLRLPQEIHDQLVNSSLGKQGSKG 290

Query: 299 MVVLARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKT 351
            + L ++ SS+RG+R GS  G+ +  +Y   ER D+  + DR   S+TPP+ TR  S+++
Sbjct: 291 QLALPQERSSVRGFRTGS-LGTEKNYFY--FERFDQDGRLDRRPFSITPPYHTR--SIQS 329

[Close]
BLAST of CsaV3_2G005080 vs. Swiss-Prot
Match: sp|O64763|ATL9_ARATH (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.3e-42
Identity = 130/305 (42.62%), Postives = 178/305 (58.36%), Query Frame = 0 

Query: 63  FFSVYIRHCND--SQSNTIRPITVAAG----RSRRAT-RGLDPAVIETFPTLIYSDVKEH 122
           F S++ R  N   S+S+  R     A     R RR T RGLD   IETFPT +YS+VK  
Sbjct: 67  FGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAV 126

Query: 123 KIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTE 182
           +IGK  +ECAVCL EFEDDETLRL+P C HVFH +C+D WL+ HSTCP+CRA+    L  
Sbjct: 127 RIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRAD----LVL 186

Query: 183 SVHRVDDSNAVVNSDTDGGDIEAQSTD----VVLETTAPPTVQIQTESELTTTTGNKALN 242
           +    DD +    S TD G I + STD    +VLE++    +   T S    T       
Sbjct: 187 NQQGDDDDSTESYSGTDPGTI-SSSTDPERGMVLESSDAHLLDAVTWSNSNITP------ 246

Query: 243 RTRTRGSRSNRLRW-LFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSM 302
           R+++ G  S ++   LFPRSHSTGHSL+QP  + +RFTLRLP ++R+Q++  K +R M  
Sbjct: 247 RSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM--KTSRTMGH 306

Query: 303 VVLARQSSSMR-GYRFGSGEGSSRGKY-YRRLERLDRTSKSDRWVLSMTPPFFTRMSSMK 354
           V L  Q+ S R GYR GS  GS R  + Y R     +++ ++R + S++  F  R  S++
Sbjct: 307 VALLPQARSSRSGYRSGS-VGSERSAFPYGR-----KSNNNNRRLHSLSFSFSFRSGSVR 352

[Close]
BLAST of CsaV3_2G005080 vs. TrEMBL
Match: tr|A0A0A0LFQ4|A0A0A0LFQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021560 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 4.1e-182
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0 

Query: 1   MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 60
           MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF
Sbjct: 97  MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 156

Query: 61  MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 157 MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 216

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV
Sbjct: 217 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 276

Query: 181 DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS 240
           DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS
Sbjct: 277 DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS 336

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM
Sbjct: 337 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM 396

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG
Sbjct: 397 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG 456

Query: 361 SGRELGQGNTAVESSMLPV 380
           SGRELGQGNTAVESSMLPV
Sbjct: 457 SGRELGQGNTAVESSMLPV 475

[Close]
BLAST of CsaV3_2G005080 vs. TrEMBL
Match: tr|A0A1S3C0V4|A0A1S3C0V4_CUCME (E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo OX=3656 GN=LOC103495208 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 6.4e-167
Identity = 354/379 (93.40%), Postives = 358/379 (94.46%), Query Frame = 0 

Query: 1   MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 60
           MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF
Sbjct: 1   MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDS SNT+RPIT AAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T+SVHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS 240
           DDSNAVVNSDTDGGDIEAQS DVV ETTAPPTVQ            NKALNRTRTRGSRS
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETTAPPTVQXXXXXXXXXXXSNKALNRTRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RA SMVVLARQSSSM
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQSSSM 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR EPG
Sbjct: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRAEPG 360

Query: 361 SGRELGQGNTAVESSMLPV 380
           SGRELGQGNTAV+SS LPV
Sbjct: 361 SGRELGQGNTAVDSSRLPV 379

[Close]
BLAST of CsaV3_2G005080 vs. TrEMBL
Match: tr|Q84KA9|Q84KA9_CUCME (RING/c3HC4/PHD zinc finger-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 6.4e-167
Identity = 354/379 (93.40%), Postives = 358/379 (94.46%), Query Frame = 0 

Query: 1   MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 60
           MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF
Sbjct: 1   MPSLTAPHGLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDS SNT+RPIT AAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T+SVHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 DDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQIQTESELTTTTGNKALNRTRTRGSRS 240
           DDSNAVVNSDTDGGDIEAQS DVV ETTAPPTVQ            NKALNRTRTRGSRS
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETTAPPTVQXXXXXXXXXXXSNKALNRTRTRGSRS 240

Query: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQSSSM 300
           NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RA SMVVLARQSSSM
Sbjct: 241 NRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQSSSM 300

Query: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRGEPG 360
           RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR EPG
Sbjct: 301 RGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNRAEPG 360

Query: 361 SGRELGQGNTAVESSMLPV 380
           SGRELGQGNTAV+SS LPV
Sbjct: 361 SGRELGQGNTAVDSSRLPV 379

[Close]
BLAST of CsaV3_2G005080 vs. TrEMBL
Match: tr|A0A251NZ83|A0A251NZ83_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G329500 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.8e-95
Identity = 199/314 (63.38%), Postives = 235/314 (74.84%), Query Frame = 0 

Query: 57  ALFFMAFFSVYIRHCNDSQSNTIRPITVAAGRSRR-ATRGLDPAVIETFPTLIYSDVKEH 116
           ALF M FFS+YIRHC+D+QS +IR      GRSRR A+RGLD AVI+TFPTL YS VK  
Sbjct: 57  ALFLMGFFSIYIRHCSDAQSASIRAGGTHTGRSRRGASRGLDAAVIDTFPTLEYSAVKGL 116

Query: 117 KIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTE 176
           KIGK ALECAVCLNEFED ETLRLIPKCDHVFHPECID WLASH+TCPVCRANL PQ ++
Sbjct: 117 KIGKGALECAVCLNEFEDVETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPQPSD 176

Query: 177 SVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQ--IQTESELTTTTGNKALNRT 236
            + ++     V+NS+    D+EAQ+  V    +AP T +   +T  +    + N+ LNR 
Sbjct: 177 PITQL----TVLNSEHVPVDVEAQNDAV---ESAPETDEGCQETVEQPELLSLNQTLNRN 236

Query: 237 RTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVL 296
           RTRGSRSNRLR LFPRSHSTGHS++QPGEDTERFTLRLPVE+RKQ++NRKLNR++S++VL
Sbjct: 237 RTRGSRSNRLRRLFPRSHSTGHSVIQPGEDTERFTLRLPVEVRKQIMNRKLNRSVSLLVL 296

Query: 297 ARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGG 356
            R+ SS RG R G   GS+R   YRRLERLDR  KSDRWV S TP F TRMSS+ +PR  
Sbjct: 297 PREGSSRRGPRMGESGGSNRLMNYRRLERLDRGFKSDRWVFSRTPSFLTRMSSLLSPRVA 356

Query: 357 SNRG----EPGSGR 364
           +N G    EPG  R
Sbjct: 357 ANDGEKAVEPGMSR 363

[Close]
BLAST of CsaV3_2G005080 vs. TrEMBL
Match: tr|M5WBV6|M5WBV6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa008615mg PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.8e-95
Identity = 199/314 (63.38%), Postives = 235/314 (74.84%), Query Frame = 0 

Query: 57  ALFFMAFFSVYIRHCNDSQSNTIRPITVAAGRSRR-ATRGLDPAVIETFPTLIYSDVKEH 116
           ALF M FFS+YIRHC+D+QS +IR      GRSRR A+RGLD AVI+TFPTL YS VK  
Sbjct: 11  ALFLMGFFSIYIRHCSDAQSASIRAGGTHTGRSRRGASRGLDAAVIDTFPTLEYSAVKGL 70

Query: 117 KIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTE 176
           KIGK ALECAVCLNEFED ETLRLIPKCDHVFHPECID WLASH+TCPVCRANL PQ ++
Sbjct: 71  KIGKGALECAVCLNEFEDVETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLVPQPSD 130

Query: 177 SVHRVDDSNAVVNSDTDGGDIEAQSTDVVLETTAPPTVQ--IQTESELTTTTGNKALNRT 236
            + ++     V+NS+    D+EAQ+  V    +AP T +   +T  +    + N+ LNR 
Sbjct: 131 PITQL----TVLNSEHVPVDVEAQNDAV---ESAPETDEGCQETVEQPELLSLNQTLNRN 190

Query: 237 RTRGSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVL 296
           RTRGSRSNRLR LFPRSHSTGHS++QPGEDTERFTLRLPVE+RKQ++NRKLNR++S++VL
Sbjct: 191 RTRGSRSNRLRRLFPRSHSTGHSVIQPGEDTERFTLRLPVEVRKQIMNRKLNRSVSLLVL 250

Query: 297 ARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGG 356
            R+ SS RG R G   GS+R   YRRLERLDR  KSDRWV S TP F TRMSS+ +PR  
Sbjct: 251 PREGSSRRGPRMGESGGSNRLMNYRRLERLDRGFKSDRWVFSRTPSFLTRMSSLLSPRVA 310

Query: 357 SNRG----EPGSGR 364
           +N G    EPG  R
Sbjct: 311 ANDGEKAVEPGMSR 317

The following BLAST results are available for this feature:
BLAST of CsaV3_2G005080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139190.16.2e-182100.00PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis sativus][more]
KGN60885.16.2e-182100.00hypothetical protein Csa_2G021560 [Cucumis sativus][more]
XP_008454907.29.7e-16793.40PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis melo] >AAO45753.1 RING/c3HC... [more]
XP_022946284.11.6e-15386.24E3 ubiquitin-protein ligase ATL6-like [Cucurbita moschata][more]
XP_023545580.11.6e-15386.24E3 ubiquitin-protein ligase ATL6-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_2G005080 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G05200.17.4e-6044.75RING/U-box superfamily protein[more]
AT5G27420.15.8e-5744.92carbon/nitrogen insensitive 1[more]
AT1G72200.12.2e-4842.36RING/U-box superfamily protein[more]
AT1G22500.17.4e-4440.86RING/U-box superfamily protein[more]
AT2G35000.17.4e-4442.62RING/U-box superfamily protein[more]
BLAST of CsaV3_2G005080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8RXX9|ATL6_ARATH1.3e-5844.75E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV... [more]
sp|Q8LGA5|ATL31_ARATH1.1e-5544.92E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 ... [more]
sp|Q84W40|ATL11_ARATH4.0e-4742.36RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2[more]
sp|Q9SK92|ATL15_ARATH1.3e-4240.86E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ... [more]
sp|O64763|ATL9_ARATH1.3e-4242.62E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV... [more]
BLAST of CsaV3_2G005080 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LFQ4|A0A0A0LFQ4_CUCSA4.1e-182100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021560 PE=4 SV=1[more]
tr|A0A1S3C0V4|A0A1S3C0V4_CUCME6.4e-16793.40E3 ubiquitin-protein ligase ATL6 OS=Cucumis melo OX=3656 GN=LOC103495208 PE=4 SV... [more]
tr|Q84KA9|Q84KA9_CUCME6.4e-16793.40RING/c3HC4/PHD zinc finger-like protein OS=Cucumis melo subsp. melo OX=412675 PE... [more]
tr|A0A251NZ83|A0A251NZ83_PRUPE3.8e-9563.38Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G329500 PE=4 SV=1[more]
tr|M5WBV6|M5WBV6_PRUPE3.8e-9563.38Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa008615mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G005080.1CsaV3_2G005080.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 124..165
e-value: 4.4E-6
score: 36.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 123..166
e-value: 2.6E-14
score: 53.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 124..166
score: 12.873
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 85..172
e-value: 3.1E-21
score: 76.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..379
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 16..238
NoneNo IPR availablePANTHERPTHR14155:SF263E3 UBIQUITIN-PROTEIN LIGASE ATL31-RELATEDcoord: 16..238
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 123..166
e-value: 4.5308E-21
score: 84.2839
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 123..172