Cla019872 (gene) Watermelon (97103) v1

Overview
NameCla019872
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRing H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
LocationChr2 : 26292900 .. 26294042 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTCTCTCACCGCCGCCCATGCCGCTCTCTTCTTCTTCCTCCTCCTCTTCTTCTCCGTCTCCGCCCAGTCCCAACTCCCCCCCGACCCCAGATCCGACCCTTACCAGTACCGTCTCAGCGGCTCCATGGCCGTCATCATCGTTATCCTCATCGCCGCCCTCTTCTTCATGGCCTTCTTCTCCGTCTACATCCGCCACTGCAACGATTCCCAATCCAACACTGTCCGCCCTATCTCCACCGCCGCCGCCCGCTCCCGTCGCGCTACTCGCGGCCTCGATCCGGCCGTAATCGAAACGTTTCCGACTCTAATTTACTCCGACGTGAAAGAGCATAAAATTGGTAAAAGTGCCCTAGAATGCGCCGTTTGTTTGAATGAATTTGAAGATGATGAAACGCTGCGTTTAATCCCTAAATGTGACCATGTGTTTCATCCCGAGTGTATTGACGCTTGGTTGGCTTCTCACTCTACTTGCCCTGTTTGTCGAGCTAATTTGTCTCCTCAACTCACTGAGACCGTCCACCGAGTTGACGATTCCAACGCCGTGGTCAACTCGGACACCGACGGAGGAGATATTGAAGCTCAGTCCAACGATGTCGTTTCCGAGACTAATTTACCGACGATGACTCCATCTCCGGTTCAGATACAAACGGAATCGGAGTTCAATACAACGACGGCCAACAAGGCGTTGAATCGGACCCGTACACGTGGATCCCGATCCAACAGATTCCGGTGGCTATTCCCCCGGTCTCACTCGACCGGGCACTCCTTGGTCCAGCCTGGGGAAGACACCGAGCGGTTTACTCTCCGGTTGCCAGTTGAGATAAGGAAGCAAGTGGTGAACCGGAAGCTGAACCGGGCGACGAGTATGGTGGTTTTGGCAAGGCAGAGCAGCTCGATGAGAGGATACCGGTTCGGTTCAGGGGAAGGGAGTAGTCGAGGGAAGTATTACCGGAGGCTGGAGCGGTTGGACCGGACATCGAAGTCGGACCGGTGGGTGTTGTCAATTACACCGCCGTTTTTTACACGTATGTCGTCGATGAAGACTCCTCGGGGAGGGAGTAACCACGGTGAATCCGGTTCGGGCCGAGAACTTGGACAGGAGACTTGTAGGGTCGATTCAAGTAGGCTTCCGGTCTGA

mRNA sequence

ATGTCCTCTCTCACCGCCGCCCATGCCGCTCTCTTCTTCTTCCTCCTCCTCTTCTTCTCCGTCTCCGCCCAGTCCCAACTCCCCCCCGACCCCAGATCCGACCCTTACCAGTACCGTCTCAGCGGCTCCATGGCCGTCATCATCGTTATCCTCATCGCCGCCCTCTTCTTCATGGCCTTCTTCTCCGTCTACATCCGCCACTGCAACGATTCCCAATCCAACACTGTCCGCCCTATCTCCACCGCCGCCGCCCGCTCCCGTCGCGCTACTCGCGGCCTCGATCCGGCCGTAATCGAAACGTTTCCGACTCTAATTTACTCCGACGTGAAAGAGCATAAAATTGGTAAAAGTGCCCTAGAATGCGCCGTTTGTTTGAATGAATTTGAAGATGATGAAACGCTGCGTTTAATCCCTAAATGTGACCATGTGTTTCATCCCGAGTGTATTGACGCTTGGTTGGCTTCTCACTCTACTTGCCCTGTTTGTCGAGCTAATTTGTCTCCTCAACTCACTGAGACCGTCCACCGAGTTGACGATTCCAACGCCGTGGTCAACTCGGACACCGACGGAGGAGATATTGAAGCTCAGTCCAACGATGTCGTTTCCGAGACTAATTTACCGACGATGACTCCATCTCCGGTTCAGATACAAACGGAATCGGAGTTCAATACAACGACGGCCAACAAGGCGTTGAATCGGACCCGTACACGTGGATCCCGATCCAACAGATTCCGGTGGCTATTCCCCCGGTCTCACTCGACCGGGCACTCCTTGGTCCAGCCTGGGGAAGACACCGAGCGGTTTACTCTCCGGTTGCCAGTTGAGATAAGGAAGCAAGTGGTGAACCGGAAGCTGAACCGGGCGACGAGTATGGTGGTTTTGGCAAGGCAGAGCAGCTCGATGAGAGGATACCGGTTCGGTTCAGGGGAAGGGAGTAGTCGAGGGAAGTATTACCGGAGGCTGGAGCGGTTGGACCGGACATCGAAGTCGGACCGGTGGGTGTTGTCAATTACACCGCCGTTTTTTACACGTATGTCGTCGATGAAGACTCCTCGGGGAGGGAGTAACCACGGTGAATCCGGTTCGGGCCGAGAACTTGGACAGGAGACTTGTAGGGTCGATTCAAGTAGGCTTCCGGTCTGA

Coding sequence (CDS)

ATGTCCTCTCTCACCGCCGCCCATGCCGCTCTCTTCTTCTTCCTCCTCCTCTTCTTCTCCGTCTCCGCCCAGTCCCAACTCCCCCCCGACCCCAGATCCGACCCTTACCAGTACCGTCTCAGCGGCTCCATGGCCGTCATCATCGTTATCCTCATCGCCGCCCTCTTCTTCATGGCCTTCTTCTCCGTCTACATCCGCCACTGCAACGATTCCCAATCCAACACTGTCCGCCCTATCTCCACCGCCGCCGCCCGCTCCCGTCGCGCTACTCGCGGCCTCGATCCGGCCGTAATCGAAACGTTTCCGACTCTAATTTACTCCGACGTGAAAGAGCATAAAATTGGTAAAAGTGCCCTAGAATGCGCCGTTTGTTTGAATGAATTTGAAGATGATGAAACGCTGCGTTTAATCCCTAAATGTGACCATGTGTTTCATCCCGAGTGTATTGACGCTTGGTTGGCTTCTCACTCTACTTGCCCTGTTTGTCGAGCTAATTTGTCTCCTCAACTCACTGAGACCGTCCACCGAGTTGACGATTCCAACGCCGTGGTCAACTCGGACACCGACGGAGGAGATATTGAAGCTCAGTCCAACGATGTCGTTTCCGAGACTAATTTACCGACGATGACTCCATCTCCGGTTCAGATACAAACGGAATCGGAGTTCAATACAACGACGGCCAACAAGGCGTTGAATCGGACCCGTACACGTGGATCCCGATCCAACAGATTCCGGTGGCTATTCCCCCGGTCTCACTCGACCGGGCACTCCTTGGTCCAGCCTGGGGAAGACACCGAGCGGTTTACTCTCCGGTTGCCAGTTGAGATAAGGAAGCAAGTGGTGAACCGGAAGCTGAACCGGGCGACGAGTATGGTGGTTTTGGCAAGGCAGAGCAGCTCGATGAGAGGATACCGGTTCGGTTCAGGGGAAGGGAGTAGTCGAGGGAAGTATTACCGGAGGCTGGAGCGGTTGGACCGGACATCGAAGTCGGACCGGTGGGTGTTGTCAATTACACCGCCGTTTTTTACACGTATGTCGTCGATGAAGACTCCTCGGGGAGGGAGTAACCACGGTGAATCCGGTTCGGGCCGAGAACTTGGACAGGAGACTTGTAGGGTCGATTCAAGTAGGCTTCCGGTCTGA

Protein sequence

MSSLTAAHAALFFFLLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFFMAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKEHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRVDDSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPSPVQIQTESEFNTTTANKALNRTRTRGSRSNRFRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSNHGESGSGRELGQETCRVDSSRLPV
Homology
[Close]
BLAST of Cla019872 vs. Swiss-Prot
Match: ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6 PE=1 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 3.5e-72
Identity = 159/339 (46.90%), Postives = 199/339 (58.70%), Query Frame = 1 

Query: 11  LFFFLLLFFSVSAQSQLPPDPRSDPYQY-RLSGSMAVIIVILIAALFFMAFFSVYIRHCN 70
           + F L+L  +  A SQ  P P + PY Y RLS +MAVI+VILIAALFFM FFS+Y RHC+
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 71  DSQSNTVRPISTAAARS--RRATRGLDPAVIETFPTLIYSDVKEHKIGKSALECAVCLNE 130
                 V P   A +R+    A RGLD +V+ETFPT +YSDVK  K+GK  LECA+CLNE
Sbjct: 75  GVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNE 134

Query: 131 FEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRVDDSNAVVNSD 190
           FEDDETLRL+PKCDHVFHP CIDAWL +H TCPVCRANL+ Q+ E               
Sbjct: 135 FEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAE--------------- 194

Query: 191 TDGGDIEAQSNDVVSETNLPTMTPSPVQIQTESEFNTTTANKALNRTRTRGSRSNRFRWL 250
             G  +E    +   E     + P PV      E   T+    ++  R  G   +  R  
Sbjct: 195 --GESVEPGGTEPDLELQQVVVNPEPVVTAPVPEQLVTS---EVDSRRLPGVPVDLKRVK 254

Query: 251 FPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVV-NRKLNRATSMVVLARQSSSMRGYRF 310
           F RSH+TGHS+VQPGE TERFTLRLP ++RK+++ + KLNR  S++VL R  SS RG   
Sbjct: 255 FSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRG--- 314

Query: 311 GSGEGSSRGKYYRRLERLDRT-SKSDRWVLSITPPFFTR 345
                          + +DR+ ++SDRW+   TP F  R
Sbjct: 315 ---------------KPIDRSRARSDRWLFRKTPSFLWR 315

[Close]
BLAST of Cla019872 vs. Swiss-Prot
Match: ATL31_ARATH (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31 PE=1 SV=2)

HSP 1 Score: 251.9 bits (642), Expect = 1.1e-65
Identity = 160/355 (45.07%), Postives = 194/355 (54.65%), Query Frame = 1 

Query: 15  LLLFFSVSAQSQLPPDPRSDPYQYR--LSGSMAVIIVILIAALFFMAFFSVYIRHCNDSQ 74
           L L  SVSA     PD R DPY Y   LS +MAV++V++IAALFFM FF+VYIRHC  + 
Sbjct: 14  LFLLLSVSAGQPGTPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAV 73

Query: 75  SNTVRPISTAAARSRRAT--RGLDPAVIETFPTLIYSDVKEHKIGKSALECAVCLNEFED 134
             +V P   A  R   AT  RGLD   IETFPT +YS+VK  KIGK ALECA+CLNEFED
Sbjct: 74  DGSVTPAGGARRRVTNATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFED 133

Query: 135 DETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRVDDSNAVVNSDTDG 194
           DETLRL+PKCDHVFHP CI AWL  H TCPVCR NL+ Q  E          VV +    
Sbjct: 134 DETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPE-------PEVVVET---- 193

Query: 195 GDIEAQSNDVVSETNLPTMTPSPVQIQTESEFNTTTANKALNRTRTRGSRSNRFRWLFPR 254
            D+EAQ    V         P PV                +   R +  RS+        
Sbjct: 194 -DLEAQQQSAV---------PVPV----------------VELPRVKFPRSH-------- 253

Query: 255 SHSTGHSLVQPGEDTERFTLRLPVEIRKQVV-NRKLNRATSMVVLARQSSSMRGYRFGSG 314
             +TGHS+V PGE T+RFTLR+P E+RK+++ N KLNR+ S+ VL R  SS  G      
Sbjct: 254 --TTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLNRSNSVFVLPRGGSSRSG------ 303

Query: 315 EGSSRGKYYRRLERLDRT-SKSDRWVLSITPPFFTRM---SSMKTPRGGSNHGES 361
                       +++DR+ +KSDRW+   TP F  R     S++    GS  G S
Sbjct: 314 ------------KQVDRSRAKSDRWLFRKTPSFLWRNRDDGSIRLGGTGSVRGNS 303

[Close]
BLAST of Cla019872 vs. Swiss-Prot
Match: ATL11_ARATH (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 4.8e-53
Identity = 134/323 (41.49%), Postives = 175/323 (54.18%), Query Frame = 1 

Query: 39  RLSGSMAVIIVILIAALFFMAFFSVYIRHCNDS----QSNTVRPISTAAARSRRATRGLD 98
           R   +MA+++++L++  FF+ FFSVYIR C +                 A +R+  RGLD
Sbjct: 58  RFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLD 117

Query: 99  PAVIETFPTLIYSDVKEHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLA 158
            ++IETFPT  YS VK  +IGK ALEC+VCLNEFEDDETLRLIPKC HVFHP CIDAWL 
Sbjct: 118 ASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLR 177

Query: 159 SHSTCPVCRANLSPQLTETVHRVDDSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPSPV 218
           SH+TCP+CRA+L P   E++  +     V  +D  G D    + D +     P       
Sbjct: 178 SHTTCPLCRADLIPVPGESIVSIQIPGLV--NDPPGSD---PNGDRIRSLGSPD------ 237

Query: 219 QIQTESEFNTTTANKALNRTRTRGSRSNRFRW----LFPRSHSTGHSLVQPGEDTERFTL 278
                 E    T N+++ R      RS    W    +F  S  TG    Q  E+ +RFTL
Sbjct: 238 --ARLIESVALTCNQSMPR------RSMSTGWNLAGMFTNSDRTG----QHSENLDRFTL 297

Query: 279 RLPVEIRKQVVNRKLNRATSMVVLARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKS 338
           RLP +I  ++VN  L++    V L +  SS RGYR GS  GS R  +Y   ER D+  + 
Sbjct: 298 RLPQDIHNKLVNPNLSKV--HVALPQVMSSTRGYRTGS-LGSERNYFY--YERFDQDGRL 352

Query: 339 DRWVLSITPPFFTRMSSMKTPRG 354
           DR   SITPP+ T   +  +P G
Sbjct: 358 DRRPFSITPPYRTSSINHMSPGG 352

[Close]
BLAST of Cla019872 vs. Swiss-Prot
Match: ATL9_ARATH (E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-49
Identity = 146/385 (37.92%), Postives = 199/385 (51.69%), Query Frame = 1 

Query: 2   SSLTAAHAALFFFLLLFFSV------SAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAAL 61
           SS    H  LF  LLL            Q+  P   ++ P     +  + V+I +L   +
Sbjct: 8   SSRWIPHNLLFLLLLLLLQSVPYGFGQTQTTPPGTTKTKP-----NDPVVVVITVLFLVI 67

Query: 62  FFMAFFSVYIRHCND--SQSNTVRPISTAA----ARSRRAT-RGLDPAVIETFPTLIYSD 121
           FFM F S++ R  N   S+S+  R     A     R RR T RGLD   IETFPT +YS+
Sbjct: 68  FFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSE 127

Query: 122 VKEHKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSP 181
           VK  +IGK  +ECAVCL EFEDDETLRL+P C HVFH +C+D WL+ HSTCP+CRA+   
Sbjct: 128 VKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRAD--- 187

Query: 182 QLTETVHRVDDSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPSPVQIQTESEFNTTTAN 241
            L       DD +    S TD G I + S D      L +     +   T S  N T   
Sbjct: 188 -LVLNQQGDDDDSTESYSGTDPGTI-SSSTDPERGMVLESSDAHLLDAVTWSNSNITP-- 247

Query: 242 KALNRTRTRGSRSNRFRW-LFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNR 301
               R+++ G  S +    LFPRSHSTGHSL+QP  + +RFTLRLP ++R+Q++  K +R
Sbjct: 248 ----RSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQLM--KTSR 307

Query: 302 ATSMVVLARQSSSMR-GYRFGSGEGSSRGKY-YRRLERLDRTSKSDRWVLSITPPFFTRM 361
               V L  Q+ S R GYR GS  GS R  + Y R     +++ ++R + S++  F  R 
Sbjct: 308 TMGHVALLPQARSSRSGYRSGS-VGSERSAFPYGR-----KSNNNNRRLHSLSFSFSFRS 367

Query: 362 SSMKTPRGGSNHGESGSGRELGQET 371
            S+++   G       +  E G+ +
Sbjct: 368 GSVRSTFSGDAPKNLPTSIEAGERS 368

[Close]
BLAST of Cla019872 vs. Swiss-Prot
Match: ATL15_ARATH (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-49
Identity = 136/345 (39.42%), Postives = 185/345 (53.62%), Query Frame = 1 

Query: 13  FFLLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFFMAFFSVYIRHCNDSQ 72
           F LLL   V A S+   + R+       S + A+I+++L++  F +   SVY+R C    
Sbjct: 13  FLLLLLEVVVASSEFDDEGRTS-----FSPTTAIIMIVLVSVFFALGCISVYMRRCLQHA 72

Query: 73  SNTVRPISTAAARSRRATR--GLDPAVIETFPTLIYSDVKEHKIGKSALECAVCLNEFED 132
                        + R T   GLD +VIETFPT  YS VK  +IGK ALEC VCLNEFED
Sbjct: 73  LGMDSGGGPGNWLNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFED 132

Query: 133 DETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRVDDSNAVVNSDTDG 192
           DETLRLIP+C HVFHP CIDAWL S +TCP+CRANL P   E+          V+S+  G
Sbjct: 133 DETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGES----------VSSEIPG 192

Query: 193 GDIEAQSNDVVS--ETNLPTMTPSPVQIQTESEFNTTTANKALNRTRTRGSRSNRFRWLF 252
              E   N + +  + N   +  SP +   +S     T N+++ R      +S    W  
Sbjct: 193 LARETGQNSLRTPIDDNRKRVLTSPDERLIDSV--AWTGNQSMPR------KSMSTGWKL 252

Query: 253 PRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATS--MVVLARQSSSMRGYRF 312
              +S   S  QP E+ +R+TLRLP EI  Q+VN  L +  S   + L ++ SS+RG+R 
Sbjct: 253 AELYSPASSPGQPEENLDRYTLRLPQEIHDQLVNSSLGKQGSKGQLALPQERSSVRGFRT 312

Query: 313 GSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTP 352
           GS  G+ +  +Y   ER D+  + DR   SITPP+ TR  S+++P
Sbjct: 313 GS-LGTEKNYFY--FERFDQDGRLDRRPFSITPPYHTR--SIQSP 329

[Close]
BLAST of Cla019872 vs. TrEMBL
Match: A0A0A0LFQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021560 PE=4 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 7.2e-189
Identity = 341/383 (89.03%), Postives = 346/383 (90.34%), Query Frame = 1 

Query: 1   MSSLTAAHAA---LFFFLLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA H     L  FL LF SVSAQSQ  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 97  MPSLTAPHGLPLFLLLFLFLFSSVSAQSQPSPDPRSDPYQYRLSGSMAVIIVILIAALFF 156

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDSQSNT+RPI+ AA RSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 157 MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 216

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTE+VHRV
Sbjct: 217 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 276

Query: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPSPVQIQTESEFNTTTANKALNRTRTR 240
           DDSNAVVNSDTDGGDIEAQS DVV ET      P  VQIQTESE  TTT NKALNRTRTR
Sbjct: 277 DDSNAVVNSDTDGGDIEAQSTDVVLETT----APPTVQIQTESELTTTTGNKALNRTRTR 336

Query: 241 GSRSNRFRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNR RWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRA SMVVLARQ
Sbjct: 337 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQ 396

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSNH 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRGGSN 
Sbjct: 397 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR 456

Query: 361 GESGSGRELGQETCRVDSSRLPV 381
           GE GSGRELGQ    V+SS LPV
Sbjct: 457 GEPGSGRELGQGNTAVESSMLPV 475

[Close]
BLAST of Cla019872 vs. TrEMBL
Match: Q84KA9_CUCME (RING/c3HC4/PHD zinc finger-like protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 666.0 bits (1717), Expect = 2.7e-188
Identity = 342/383 (89.30%), Postives = 349/383 (91.12%), Query Frame = 1 

Query: 1   MSSLTAAHAA-LFFFLLLFF--SVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA H   LF FLLLF   SVSAQ Q  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDS SNTVRPI+ AA RSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T++VHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPSPVQIQTESEFNTTTANKALNRTRTR 240
           DDSNAVVNSDTDGGDIEAQSNDVVSET      P  VQIQTESE +TTT+NKALNRTRTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETT----APPTVQIQTESELSTTTSNKALNRTRTR 240

Query: 241 GSRSNRFRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNR RWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RATSMVVLARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSNH 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRGGSN 
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR 360

Query: 361 GESGSGRELGQETCRVDSSRLPV 381
            E GSGRELGQ    VDSSRLPV
Sbjct: 361 AEPGSGRELGQGNTAVDSSRLPV 379

[Close]
BLAST of Cla019872 vs. TrEMBL
Match: A0A061FA85_THECC (RING/U-box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_026596 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 8.1e-116
Identity = 229/388 (59.02%), Postives = 279/388 (71.91%), Query Frame = 1 

Query: 3   SLTAAH---AALFFFLLLFFSVSAQSQLPPDPRSDPYQY-RLSGSMAVIIVILIAALFFM 62
           S TA H   + L FFL +  S    +  P +   + Y Y R S SMA+I+V+LIAALFFM
Sbjct: 2   SCTAKHGIVSLLLFFLFVLLSPPPSAAQPINQSDERYSYARFSPSMAIIVVVLIAALFFM 61

Query: 63  AFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKEHKIGKSA 122
             FS+YIR+C+DS +N+VRP++  A RSRR TRGL+ +VIETFPT++YS+VK HKIGK A
Sbjct: 62  GLFSIYIRNCSDSNANSVRPVAAGAGRSRRGTRGLEASVIETFPTMVYSEVKVHKIGKGA 121

Query: 123 LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRVD 182
           LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRANL+PQ  + V +  
Sbjct: 122 LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHNTCPVCRANLAPQPGDPVSQPT 181

Query: 183 DSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPS----PVQIQTESEFNTTTANKALNRT 242
           +    +N+     D+EAQ++D  SET+      +     V+ Q   E    + N+ LNR 
Sbjct: 182 E----LNNTAAEVDLEAQNDDGESETDEERRRNNNVNCDVEAQVAPEVEVISLNRTLNRN 241

Query: 243 RTRGSRSNRFRWL-FPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVV 302
           RTRGSRS+R R L FPRSHSTGHSLVQPGE+T+RFTLRLP E+RKQ + R+LNRA SMVV
Sbjct: 242 RTRGSRSSRARKLFFPRSHSTGHSLVQPGENTDRFTLRLPAEVRKQFMKRELNRALSMVV 301

Query: 303 LARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRG 362
           L R+ SS RGYR G   GS RGK +RRLERLD+  KSDRWV S+TPPFF+R SSMK+P+ 
Sbjct: 302 LPRERSSRRGYRTGEDGGSGRGKSFRRLERLDQGVKSDRWVFSMTPPFFSRASSMKSPKV 361

Query: 363 GSNHGE-SGSGRELGQETCRVDSSRLPV 381
            +N GE S S   +G      DSSR PV
Sbjct: 362 AANDGEGSSSSSPVGPVG---DSSRPPV 382

[Close]
BLAST of Cla019872 vs. TrEMBL
Match: A0A0D2PHR8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G243000 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 9.6e-109
Identity = 218/387 (56.33%), Postives = 275/387 (71.06%), Query Frame = 1 

Query: 5   TAAHAALF-FFLLLFFSVSAQSQLPPDPRSDPYQY-RLSGSMAVIIVILIAALFFMAFFS 64
           TA H  +F  FLLLF S    +  P DP +D Y Y R + SMA+I+V+LI+ALFFM FFS
Sbjct: 4   TAKHGIVFVLFLLLFLSPPPSTAQPTDPNNDRYPYARFTPSMAIIVVVLISALFFMGFFS 63

Query: 65  VYIRHCNDSQSN--TVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKEHKIGKSALE 124
           +Y+R+C+++ +N   VRP +    RSRR  RGL+P+VIETFPT++YS+VK HKIGK ALE
Sbjct: 64  IYLRNCSEANANGSVVRPFNGETGRSRRGMRGLEPSVIETFPTMVYSEVKVHKIGKGALE 123

Query: 125 CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRVDDS 184
           CAVCLNEFED+ETLRLIPKCDHVFHP+CIDAWLASH+TCPVCRANL+PQ  + +      
Sbjct: 124 CAVCLNEFEDEETLRLIPKCDHVFHPDCIDAWLASHTTCPVCRANLAPQPGDPL----SQ 183

Query: 185 NAVVNSDTDGGDIEAQSNDVVSETN-----LPTMTPSPVQIQTESEFNTTTANKALNRTR 244
            A +++ T   D+EAQ++D  SE        P    S  + Q   E      N+ LNR R
Sbjct: 184 PAELDNTTTELDLEAQNHDDDSELEEERRINPNNINSDAEAQVAPEVEVIDLNRTLNRNR 243

Query: 245 TRGSRSNRFR-WLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVL 304
           TRGS S+R R + F RSH+TGHSLVQPGE+T+RFTLRLPV++RKQ++NRKLNRATS+ VL
Sbjct: 244 TRGSISSRTRKFFFLRSHTTGHSLVQPGENTDRFTLRLPVDVRKQLINRKLNRATSL-VL 303

Query: 305 ARQSSSMRGYRFG-SGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRG 364
            R+ SS RGYR G  G GSSRGK +R L++ D   KSDRWV S+TPPFF+R+SS K+P+ 
Sbjct: 304 PRERSSRRGYRTGEDGGGSSRGKLFRSLDKSDGGVKSDRWVFSMTPPFFSRVSSTKSPKV 363

Query: 365 GSNHGESGSGRELGQETCRVDSSRLPV 381
            +N+GE  S   +       DSSR PV
Sbjct: 364 TANNGEDTSSSPVEPAG---DSSRPPV 382

[Close]
BLAST of Cla019872 vs. TrEMBL
Match: A0A059D403_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01999 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.5e-103
Identity = 217/401 (54.11%), Postives = 275/401 (68.58%), Query Frame = 1 

Query: 3   SLTAAHAALFFFLLLFFSVS------AQSQLPPDPRSDPYQY-RLSGSMAVIIVILIAAL 62
           +L+ + ++L   LLL+   S      AQ+  PPD  + PY Y R S SMAVIIV+LIAAL
Sbjct: 6   NLSPSRSSLALLLLLWSCASSAPFAAAQANPPPDSEN-PYNYTRFSPSMAVIIVVLIAAL 65

Query: 63  FFMAFFSVYIRHCNDSQSNTVRP----ISTAAARSRRATRGLDPAVIETFPTLIYSDVKE 122
           FFMAFFS+YIRHC+D+ S ++R     + T  +R   A+RGLDPAVI TFPTL+Y+DVK 
Sbjct: 66  FFMAFFSIYIRHCSDANSASIRTGGGVVGTGRSRRGGASRGLDPAVIATFPTLVYADVKG 125

Query: 123 HKIGKSALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLT 182
            KIGK ALECAVCLNEF+DDETLRLIPKCDHVFHPEC+DAWLASH+TCPVCRANL PQ  
Sbjct: 126 LKIGKGALECAVCLNEFQDDETLRLIPKCDHVFHPECVDAWLASHTTCPVCRANLVPQPG 185

Query: 183 ETVHRVDDSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPSPV-QIQTESEFNTTTA--- 242
           E    + +      S+  G D E Q+ D   E  + T+      +++ E   +   A   
Sbjct: 186 EGPFELPELTR--RSELAGEDEENQNRDGDLERAIATLEREDADEVEVEVAVDRQAAEPP 245

Query: 243 ------NKALNRTRTR-GSRSNRFRW--LFPRSHSTGHSLVQPGEDTERFTLRLPVEIRK 302
                 +K LNR RTR GSRS+R  W  LFPRSHSTGHSLVQPGEDTERF LRLP E+RK
Sbjct: 246 PEAEDPSKTLNRNRTRGGSRSSRMAWRLLFPRSHSTGHSLVQPGEDTERFKLRLPAEVRK 305

Query: 303 QVVNRKLNRATSMVVLARQSSSMRGYRFGSGEGSSR-GKY--YRRLERLDRTSKSDRWVL 362
           Q++NR+LNRA SMVVL R+SSS RGYR G+GEGSSR G++  +RRL+R +  +KSDRW  
Sbjct: 306 QIMNRQLNRAMSMVVLPRESSSRRGYRAGAGEGSSRFGRHFSFRRLDRSEPGAKSDRWFF 365

Query: 363 SITPPFFTRMSSMKTPRGGSNHGESGSGRELGQETCRVDSS 377
            + PP F+R SS+++PR  +   + GS   +G    R++++
Sbjct: 366 GMVPPLFSRASSLRSPRVAAASDDGGS---VGSRRSRMEAA 400

[Close]
BLAST of Cla019872 vs. NCBI nr
Match: gi|449442843|ref|XP_004139190.1| (PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis sativus])

HSP 1 Score: 667.9 bits (1722), Expect = 1.0e-188
Identity = 341/383 (89.03%), Postives = 346/383 (90.34%), Query Frame = 1 

Query: 1   MSSLTAAHAA---LFFFLLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA H     L  FL LF SVSAQSQ  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLLLFLFLFSSVSAQSQPSPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDSQSNT+RPI+ AA RSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 61  MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTE+VHRV
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 180

Query: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPSPVQIQTESEFNTTTANKALNRTRTR 240
           DDSNAVVNSDTDGGDIEAQS DVV ET      P  VQIQTESE  TTT NKALNRTRTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSTDVVLETT----APPTVQIQTESELTTTTGNKALNRTRTR 240

Query: 241 GSRSNRFRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNR RWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRA SMVVLARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSNH 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRGGSN 
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR 360

Query: 361 GESGSGRELGQETCRVDSSRLPV 381
           GE GSGRELGQ    V+SS LPV
Sbjct: 361 GEPGSGRELGQGNTAVESSMLPV 379

[Close]
BLAST of Cla019872 vs. NCBI nr
Match: gi|700205766|gb|KGN60885.1| (hypothetical protein Csa_2G021560 [Cucumis sativus])

HSP 1 Score: 667.9 bits (1722), Expect = 1.0e-188
Identity = 341/383 (89.03%), Postives = 346/383 (90.34%), Query Frame = 1 

Query: 1   MSSLTAAHAA---LFFFLLLFFSVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA H     L  FL LF SVSAQSQ  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 97  MPSLTAPHGLPLFLLLFLFLFSSVSAQSQPSPDPRSDPYQYRLSGSMAVIIVILIAALFF 156

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDSQSNT+RPI+ AA RSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 157 MAFFSVYIRHCNDSQSNTIRPITVAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 216

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTE+VHRV
Sbjct: 217 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTESVHRV 276

Query: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPSPVQIQTESEFNTTTANKALNRTRTR 240
           DDSNAVVNSDTDGGDIEAQS DVV ET      P  VQIQTESE  TTT NKALNRTRTR
Sbjct: 277 DDSNAVVNSDTDGGDIEAQSTDVVLETT----APPTVQIQTESELTTTTGNKALNRTRTR 336

Query: 241 GSRSNRFRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNR RWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRA SMVVLARQ
Sbjct: 337 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRAMSMVVLARQ 396

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSNH 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRGGSN 
Sbjct: 397 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR 456

Query: 361 GESGSGRELGQETCRVDSSRLPV 381
           GE GSGRELGQ    V+SS LPV
Sbjct: 457 GEPGSGRELGQGNTAVESSMLPV 475

[Close]
BLAST of Cla019872 vs. NCBI nr
Match: gi|28558782|gb|AAO45753.1| (RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 666.0 bits (1717), Expect = 3.9e-188
Identity = 342/383 (89.30%), Postives = 349/383 (91.12%), Query Frame = 1 

Query: 1   MSSLTAAHAA-LFFFLLLFF--SVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA H   LF FLLLF   SVSAQ Q  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 1   MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 60

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDS SNTVRPI+ AA RSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 61  MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T++VHR 
Sbjct: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 180

Query: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPSPVQIQTESEFNTTTANKALNRTRTR 240
           DDSNAVVNSDTDGGDIEAQSNDVVSET      P  VQIQTESE +TTT+NKALNRTRTR
Sbjct: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETT----APPTVQIQTESELSTTTSNKALNRTRTR 240

Query: 241 GSRSNRFRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNR RWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RATSMVVLARQ
Sbjct: 241 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQ 300

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSNH 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRGGSN 
Sbjct: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR 360

Query: 361 GESGSGRELGQETCRVDSSRLPV 381
            E GSGRELGQ    VDSSRLPV
Sbjct: 361 AEPGSGRELGQGNTAVDSSRLPV 379

[Close]
BLAST of Cla019872 vs. NCBI nr
Match: gi|659070406|ref|XP_008454907.1| (PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis melo])

HSP 1 Score: 666.0 bits (1717), Expect = 3.9e-188
Identity = 342/383 (89.30%), Postives = 349/383 (91.12%), Query Frame = 1 

Query: 1   MSSLTAAHAA-LFFFLLLFF--SVSAQSQLPPDPRSDPYQYRLSGSMAVIIVILIAALFF 60
           M SLTA H   LF FLLLF   SVSAQ Q  PDPRSDPYQYRLSGSMAVIIVILIAALFF
Sbjct: 88  MPSLTAPHGLPLFLFLLLFLFSSVSAQFQPAPDPRSDPYQYRLSGSMAVIIVILIAALFF 147

Query: 61  MAFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 120
           MAFFSVYIRHCNDS SNTVRPI+ AA RSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS
Sbjct: 148 MAFFSVYIRHCNDSPSNTVRPITAAAGRSRRATRGLDPAVIETFPTLIYSDVKEHKIGKS 207

Query: 121 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRV 180
           ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQ T++VHR 
Sbjct: 208 ALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQPTDSVHRA 267

Query: 181 DDSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPSPVQIQTESEFNTTTANKALNRTRTR 240
           DDSNAVVNSDTDGGDIEAQSNDVVSET      P  VQIQTESE +TTT+NKALNRTRTR
Sbjct: 268 DDSNAVVNSDTDGGDIEAQSNDVVSETT----APPTVQIQTESELSTTTSNKALNRTRTR 327

Query: 241 GSRSNRFRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVVLARQ 300
           GSRSNR RWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKL+RATSMVVLARQ
Sbjct: 328 GSRSNRLRWLFPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLHRATSMVVLARQ 387

Query: 301 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRGGSNH 360
           SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLS+TPPFFTRMSSMKTPRGGSN 
Sbjct: 388 SSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSMTPPFFTRMSSMKTPRGGSNR 447

Query: 361 GESGSGRELGQETCRVDSSRLPV 381
            E GSGRELGQ    VDSSRLPV
Sbjct: 448 AEPGSGRELGQGNTAVDSSRLPV 466

[Close]
BLAST of Cla019872 vs. NCBI nr
Match: gi|590643830|ref|XP_007030911.1| (RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 425.2 bits (1092), Expect = 1.2e-115
Identity = 229/388 (59.02%), Postives = 279/388 (71.91%), Query Frame = 1 

Query: 3   SLTAAH---AALFFFLLLFFSVSAQSQLPPDPRSDPYQY-RLSGSMAVIIVILIAALFFM 62
           S TA H   + L FFL +  S    +  P +   + Y Y R S SMA+I+V+LIAALFFM
Sbjct: 2   SCTAKHGIVSLLLFFLFVLLSPPPSAAQPINQSDERYSYARFSPSMAIIVVVLIAALFFM 61

Query: 63  AFFSVYIRHCNDSQSNTVRPISTAAARSRRATRGLDPAVIETFPTLIYSDVKEHKIGKSA 122
             FS+YIR+C+DS +N+VRP++  A RSRR TRGL+ +VIETFPT++YS+VK HKIGK A
Sbjct: 62  GLFSIYIRNCSDSNANSVRPVAAGAGRSRRGTRGLEASVIETFPTMVYSEVKVHKIGKGA 121

Query: 123 LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHSTCPVCRANLSPQLTETVHRVD 182
           LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASH+TCPVCRANL+PQ  + V +  
Sbjct: 122 LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLASHNTCPVCRANLAPQPGDPVSQPT 181

Query: 183 DSNAVVNSDTDGGDIEAQSNDVVSETNLPTMTPS----PVQIQTESEFNTTTANKALNRT 242
           +    +N+     D+EAQ++D  SET+      +     V+ Q   E    + N+ LNR 
Sbjct: 182 E----LNNTAAEVDLEAQNDDGESETDEERRRNNNVNCDVEAQVAPEVEVISLNRTLNRN 241

Query: 243 RTRGSRSNRFRWL-FPRSHSTGHSLVQPGEDTERFTLRLPVEIRKQVVNRKLNRATSMVV 302
           RTRGSRS+R R L FPRSHSTGHSLVQPGE+T+RFTLRLP E+RKQ + R+LNRA SMVV
Sbjct: 242 RTRGSRSSRARKLFFPRSHSTGHSLVQPGENTDRFTLRLPAEVRKQFMKRELNRALSMVV 301

Query: 303 LARQSSSMRGYRFGSGEGSSRGKYYRRLERLDRTSKSDRWVLSITPPFFTRMSSMKTPRG 362
           L R+ SS RGYR G   GS RGK +RRLERLD+  KSDRWV S+TPPFF+R SSMK+P+ 
Sbjct: 302 LPRERSSRRGYRTGEDGGSGRGKSFRRLERLDQGVKSDRWVFSMTPPFFSRASSMKSPKV 361

Query: 363 GSNHGE-SGSGRELGQETCRVDSSRLPV 381
            +N GE S S   +G      DSSR PV
Sbjct: 362 AANDGEGSSSSSPVGPVG---DSSRPPV 382

The following BLAST results are available for this feature:
BLAST of Cla019872 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL6_ARATH3.5e-7246.90E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6 PE=1 SV=2[more]
ATL31_ARATH1.1e-6545.07E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31 PE=1 SV=2[more]
ATL11_ARATH4.8e-5341.49RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2 SV=2[more]
ATL9_ARATH1.1e-4937.92E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9 PE=1 SV=1[more]
ATL15_ARATH1.1e-4939.42E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15 PE=1 SV=1[more]
BLAST of Cla019872 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFQ4_CUCSA7.2e-18989.03Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021560 PE=4 SV=1[more]
Q84KA9_CUCME2.7e-18889.30RING/c3HC4/PHD zinc finger-like protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A061FA85_THECC8.1e-11659.02RING/U-box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_026... [more]
A0A0D2PHR8_GOSRA9.6e-10956.33Uncharacterized protein OS=Gossypium raimondii GN=B456_004G243000 PE=4 SV=1[more]
A0A059D403_EUCGR3.5e-10354.11Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01999 PE=4 SV=1[more]
BLAST of Cla019872 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442843|ref|XP_004139190.1|1.0e-18889.03PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis sativus][more]
gi|700205766|gb|KGN60885.1|1.0e-18889.03hypothetical protein Csa_2G021560 [Cucumis sativus][more]
gi|28558782|gb|AAO45753.1|3.9e-18889.30RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo][more]
gi|659070406|ref|XP_008454907.1|3.9e-18889.30PREDICTED: E3 ubiquitin-protein ligase ATL6 [Cucumis melo][more]
gi|590643830|ref|XP_007030911.1|1.2e-11559.02RING/U-box superfamily protein, putative isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU46078watermelon EST collection version 2.0transcribed_cluster
WMU65684watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla019872Cla019872.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU65684WMU65684transcribed_cluster
WMU46078WMU46078transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 120..163
score: 7.4
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 121..162
score: 4.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 121..163
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 118..166
score: 1.5
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 14..188
score: 2.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 120..169
score: 1.19