CsaV3_2G004840 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G004840
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	protein FANTASTIC FOUR 1
Location	chr2 : 2633234 .. 2634810 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATATATTATTATTTATTCCAAATCTTTTGGGCATGTCAAGTGGGACCTGTCACCCTTTCCTCATCACTCCAGCTCAATCCTCTTCACCATAGCCCATAACTTCTACTACAATTTATTTTCTCATATAAAATATTTTATTTGCCATGAGCCAAATTTTAATTGGAGAATTTTGATATCACCTTAGTTTTTCTTTTTTTCTAGATATATATATATATATAGCCAACTTCTTCTCAGATTTATTCATTTCTTTCTTTTCAAATTACAAGGAATGACGACGATGATGAGTTTTTACAAAAAGAGTCTCCACTCATTCTTATCCTTCACCGACAACCTTTCTTCCAAAACTTCACCACCTTTCAATAACTCTAATCCCCACCTTGAATTACACCATGCCTTAGGCTTAGGATTGATTAACTCCGATCATACCAATGCCACGCAATTCAATAAATCTCCAAATATTCTTGAATCTTCCTCCCTCATTAAACCTTCTCTTTCCTCGTCCAGAAAAGACCCCGGTGGGGTCGGTTTCATCGACGATGTTGGCGGCGGCGTCGACGGGTTGATGTCGTGCACTGAGAGCCTTGGATTTGAGAGCTCCGATGAGAGATTGGTGAATGATGAATTGACGACGATGGAGGATAATTGCGGCGGGTGGTGTATGTCGAGGGTGCGGCGGAGGAAGGTGGTGGCGGAAGAGAGGAAGTTTCCACCACCGTTGACGTCGCTGAATCAACATGGACATCCGAATTTTTATCTCCGGTCAGTGAGGAAAGATGGGAGATTGGAGCTGACGGAGGTTAGGATCGAACGGACCGAGATTCTTCGAGCGTGTCGTGGAGATGGACGGTTGAGATTGCATCTTATCAAAGATGAAGAACAAGGAGAAAAAGATGGCGGCGACAGGGAGAAGGAAGGTGGGATTGAAGAGGAGGAGGAGAAAGACGAAAAGGAAGAGGAAGAAGAAGAAGTGGAGGGGTTAGTGAAGGAAGGAAAAATGGAATTTAGGCGATGTGTGGAGATGATAAAGCACCAGCGTCGCCATGAGCACCACCGTAGCCACCACCAGCATTTGGATGTGTGGAGACAGCACTGCGTTACAACAAGTTAAGAATTATTTTTTATAAGTTAAGTCGGTAGAATTAAGTAATTAATGAAAGCGGTGGGTGTGCATAAACAATGAGAAATTATTATTATTATTATTATCATCATCATCATTATTATTATTAATTTGTGTGGAATGTCAATTTACCAATATCTTTACATTCCTTTTCTTCTTTTAAAAAATGTCATTTTTTTTCCTTCTTCTTGGCTCTAGATAATTGGAATATCATGTAATGCAAACTCCAAGATGAAATTCCCCCACTTGCATTTTTTATTTTCTTTGTAGGTTAAAATGATAAAGATTGATAAATATATCAATTAGATAATTACGATTGCTTTTATCAAAAAATTAAATAAAAGGGGAAACGTGGGTTTTTATTGGTTGAATTCAATTTTGACTGTGTGTTGTTAGAGGGGATTTGGATTGACTTTAGCTAATAAGAATAAGAATATAAATAACCAAAGCAATGGAGA

mRNA sequence

ATGACGACGATGATGAGTTTTTACAAAAAGAGTCTCCACTCATTCTTATCCTTCACCGACAACCTTTCTTCCAAAACTTCACCACCTTTCAATAACTCTAATCCCCACCTTGAATTACACCATGCCTTAGGCTTAGGATTGATTAACTCCGATCATACCAATGCCACGCAATTCAATAAATCTCCAAATATTCTTGAATCTTCCTCCCTCATTAAACCTTCTCTTTCCTCGTCCAGAAAAGACCCCGGTGGGGTCGGTTTCATCGACGATGTTGGCGGCGGCGTCGACGGGTTGATGTCGTGCACTGAGAGCCTTGGATTTGAGAGCTCCGATGAGAGATTGGTGAATGATGAATTGACGACGATGGAGGATAATTGCGGCGGGTGGTGTATGTCGAGGGTGCGGCGGAGGAAGGTGGTGGCGGAAGAGAGGAAGTTTCCACCACCGTTGACGTCGCTGAATCAACATGGACATCCGAATTTTTATCTCCGGTCAGTGAGGAAAGATGGGAGATTGGAGCTGACGGAGGTTAGGATCGAACGGACCGAGATTCTTCGAGCGTGTCGTGGAGATGGACGGTTGAGATTGCATCTTATCAAAGATGAAGAACAAGGAGAAAAAGATGGCGGCGACAGGGAGAAGGAAGGTGGGATTGAAGAGGAGGAGGAGAAAGACGAAAAGGAAGAGGAAGAAGAAGAAGTGGAGGGGTTAGTGAAGGAAGGAAAAATGGAATTTAGGCGATGTGTGGAGATGATAAAGCACCAGCGTCGCCATGAGCACCACCGTAGCCACCACCAGCATTTGGATGTGTGGAGACAGCACTGCGTTACAACAAGTTAA

Coding sequence (CDS)

ATGACGACGATGATGAGTTTTTACAAAAAGAGTCTCCACTCATTCTTATCCTTCACCGACAACCTTTCTTCCAAAACTTCACCACCTTTCAATAACTCTAATCCCCACCTTGAATTACACCATGCCTTAGGCTTAGGATTGATTAACTCCGATCATACCAATGCCACGCAATTCAATAAATCTCCAAATATTCTTGAATCTTCCTCCCTCATTAAACCTTCTCTTTCCTCGTCCAGAAAAGACCCCGGTGGGGTCGGTTTCATCGACGATGTTGGCGGCGGCGTCGACGGGTTGATGTCGTGCACTGAGAGCCTTGGATTTGAGAGCTCCGATGAGAGATTGGTGAATGATGAATTGACGACGATGGAGGATAATTGCGGCGGGTGGTGTATGTCGAGGGTGCGGCGGAGGAAGGTGGTGGCGGAAGAGAGGAAGTTTCCACCACCGTTGACGTCGCTGAATCAACATGGACATCCGAATTTTTATCTCCGGTCAGTGAGGAAAGATGGGAGATTGGAGCTGACGGAGGTTAGGATCGAACGGACCGAGATTCTTCGAGCGTGTCGTGGAGATGGACGGTTGAGATTGCATCTTATCAAAGATGAAGAACAAGGAGAAAAAGATGGCGGCGACAGGGAGAAGGAAGGTGGGATTGAAGAGGAGGAGGAGAAAGACGAAAAGGAAGAGGAAGAAGAAGAAGTGGAGGGGTTAGTGAAGGAAGGAAAAATGGAATTTAGGCGATGTGTGGAGATGATAAAGCACCAGCGTCGCCATGAGCACCACCGTAGCCACCACCAGCATTTGGATGTGTGGAGACAGCACTGCGTTACAACAAGTTAA

Protein sequence

MTTMMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHALGLGLINSDHTNATQFNKSPNILESSSLIKPSLSSSRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDELTTMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIERTEILRACRGDGRLRLHLIKDEEQGEKDGGDREKEGGIEEEEEKDEKEEEEEEVEGLVKEGKMEFRRCVEMIKHQRRHEHHRSHHQHLDVWRQHCVTTS

Homology

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BLAST of CsaV3_2G004840 vs. NCBI nr
Match: XP_011648796.1 (PREDICTED: protein FANTASTIC FOUR 4 [Cucumis sativus] >KGN60862.1 hypothetical protein Csa_2G020850 [Cucumis sativus])

HSP 1 Score: 479.6 bits (1233), Expect = 7.5e-132
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MTTMMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHALGLGLINSDHTNATQFNK 60
           MTTMMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHALGLGLINSDHTNATQFNK
Sbjct: 1   MTTMMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHALGLGLINSDHTNATQFNK 60

Query: 61  SPNILESSSLIKPSLSSSRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDELT 120
           SPNILESSSLIKPSLSSSRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDELT
Sbjct: 61  SPNILESSSLIKPSLSSSRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDELT 120

Query: 121 TMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIE 180
           TMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIE
Sbjct: 121 TMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIE 180

Query: 181 RTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKE 240
           RTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKE
Sbjct: 181 RTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKE 240

Query: 241 GKMEFRRCVEMIKHQRRHEXXXXXXXHLDVWRQHCVTTS 280
           GKMEFRRCVEMIKHQRRHEXXXXXXXHLDVWRQHCVTTS
Sbjct: 241 GKMEFRRCVEMIKHQRRHEXXXXXXXHLDVWRQHCVTTS 279

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BLAST of CsaV3_2G004840 vs. NCBI nr
Match: XP_008455263.1 (PREDICTED: protein FANTASTIC FOUR 1 [Cucumis melo])

HSP 1 Score: 404.1 bits (1037), Expect = 4.0e-109
Identity = 255/295 (86.44%), Postives = 256/295 (86.78%), Query Frame = 0


Query: 1   MTTMMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHA-LGLGLINSDHTNATQFN 60
           MT MMSFYKKSLHSFLSFTDNLSSK SPPFNNSNPHLELHHA  GLGLINSDH NA Q N
Sbjct: 1   MTMMMSFYKKSLHSFLSFTDNLSSKPSPPFNNSNPHLELHHASSGLGLINSDHNNAMQSN 60

Query: 61  KSPNILESSSLIKPSLSSSRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDEL 120
           KSPNILESSSLIKP LSSSRKDPGGVGF+DDVGGGVDGLMSCTESLGFESSDERLVNDEL
Sbjct: 61  KSPNILESSSLIKPPLSSSRKDPGGVGFMDDVGGGVDGLMSCTESLGFESSDERLVNDEL 120

Query: 121 TTMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRI 180
           TTMEDNCGGWCMSRVRRRKVV EERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRI
Sbjct: 121 TTMEDNCGGWCMSRVRRRKVVTEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRI 180

Query: 181 ERTEILRACRGDGRLRLHLIKDEEQGE-----------XXXXXXXXXXXXXXXXXXXXXX 240
           ERTEILRACRGDGRLRLHLIKDEEQGE           XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 ERTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXLVKEGKMEFRRCVEMI----KHQRRHEXXXXXXXHLDVWRQHCVTTS 280
           XXXXXXXX       EFRRCVEMI           XXXXXXX LDVWRQHCVTTS
Sbjct: 241 XXXXXXXXXXXXXXXEFRRCVEMIXXXXXXXXXXXXXXXXXXXLDVWRQHCVTTS 295

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BLAST of CsaV3_2G004840 vs. NCBI nr
Match: XP_022965897.1 (uncharacterized protein LOC111465645 [Cucurbita maxima])

HSP 1 Score: 231.9 bits (590), Expect = 2.7e-57
Identity = 155/279 (55.56%), Postives = 178/279 (63.80%), Query Frame = 0


Query: 4   MMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHALGLGLINSDHTNATQFNKSPN 63
           M++ Y+KSL+SF+SF D  S K++     S+   E H  LGLGLI+ +  N TQF KSPN
Sbjct: 1   MINLYRKSLYSFMSFADTFSPKSA-----SSAAAE-HPLLGLGLISDN--NLTQF-KSPN 60

Query: 64  ILESSSLIKPSLSS---SRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDELT 123
           ILESSS++KP  SS    R+DPGGVGF+D VGGGVDGLMSCTESLGFESSDERLVNDE+ 
Sbjct: 61  ILESSSVLKPLCSSPATPRQDPGGVGFLDAVGGGVDGLMSCTESLGFESSDERLVNDEMM 120

Query: 124 TMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIE 183
            +E+                     FPPPLTSLNQHGHPNFYLRSVRKDGRLELTEV+IE
Sbjct: 121 GVENGGDSXXXXXXXXXXXXXXXXXFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVKIE 180

Query: 184 RTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKE 243
           RTEI                DE++                  XXXXXXXXXXXXXX    
Sbjct: 181 RTEIXXXXXXXXXXXXXXXXDEDE------------------XXXXXXXXXXXXXXXXXX 240

Query: 244 GKMEFRRCVEMIKHQRRHEXXXXXXXHLDVWRQHCVTTS 280
              EFRRCVE++ HQRR E       +LDVWRQHCVTTS
Sbjct: 241 XXXEFRRCVEVVNHQRRREHHRGHHRNLDVWRQHCVTTS 252

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BLAST of CsaV3_2G004840 vs. NCBI nr
Match: XP_022937985.1 (uncharacterized protein LOC111444206 [Cucurbita moschata])

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 155/280 (55.36%), Postives = 178/280 (63.57%), Query Frame = 0


Query: 4   MMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHALGLGLINSDHTNATQFNKSPN 63
           M++ Y+KSL+SF+SF D  S K++P   ++      H  LGLGLI+ D  N TQF KSPN
Sbjct: 1   MINLYRKSLYSFMSFADTFSPKSAP---SAAAAAAEHPLLGLGLISDD--NLTQF-KSPN 60

Query: 64  ILESSSLIKPSLSS---SRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDELT 123
           ILESSS++KP  SS    R+DPGGVGF+D VGGGVDGLMSCTESLGFESSDERLVNDE+ 
Sbjct: 61  ILESSSVLKPLCSSPATPRQDPGGVGFLDAVGGGVDGLMSCTESLGFESSDERLVNDEMM 120

Query: 124 TMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIE 183
            +E+                        PLTSLNQHGHPNFYLRSVRKDGRLELTEV+IE
Sbjct: 121 GVENGGXXXXXXXXXXXXXXXXXXXXXXPLTSLNQHGHPNFYLRSVRKDGRLELTEVKIE 180

Query: 184 RTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKE 243
           RTEI                D ++                 XXXXXXXXXXXXXXX    
Sbjct: 181 RTEIXXXXXXXXXXXXXXXXDXDE-----------------XXXXXXXXXXXXXXXXXXX 240

Query: 244 GKMEFRRCVEMIKHQ-RRHEXXXXXXXHLDVWRQHCVTTS 280
              EFRRCVE++ HQ     XXXXXX +LDVWRQHCVTTS
Sbjct: 241 XXXEFRRCVEVVNHQXXXXXXXXXXXRNLDVWRQHCVTTS 257

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BLAST of CsaV3_2G004840 vs. NCBI nr
Match: XP_023521579.1 (uncharacterized protein LOC111785403 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.1 bits (536), Expect = 4.9e-51
Identity = 154/281 (54.80%), Postives = 178/281 (63.35%), Query Frame = 0


Query: 4   MMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHH-ALGLGLINSDHTNATQFNKSP 63
           M++ Y+KSL+SF+SF D  S K++P    ++      H  LGLGLI+ +  N TQF KSP
Sbjct: 1   MINLYRKSLYSFMSFADTFSPKSAPSAAVADADAAAEHPLLGLGLISDN--NLTQF-KSP 60

Query: 64  NILESSSLIKPSLSS---SRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDEL 123
           NILESSS++KP  SS    R+DPGGVGF+D VGGGVDGLMSCTESLGFESSDERLVNDE+
Sbjct: 61  NILESSSVLKPLCSSPATPRQDPGGVGFLDAVGGGVDGLMSCTESLGFESSDERLVNDEM 120

Query: 124 TTMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRI 183
             +E+                        PLTSLNQHGHPNFYLRSVRKDGRLELTEV+I
Sbjct: 121 MGVENGGXXXXXXXXXXXXXXXXXXXXXXPLTSLNQHGHPNFYLRSVRKDGRLELTEVKI 180

Query: 184 ERTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVK 243
           ERTEI                D ++                 XXXXXXXXXXXXXXX   
Sbjct: 181 ERTEIXXXXXXXXXXXXXXXXDXDE-----------------XXXXXXXXXXXXXXXXXX 240

Query: 244 EGKMEFRRCVEMIKHQ-RRHEXXXXXXXHLDVWRQHCVTTS 280
               EFRRCVE++ HQ     XXXXXX +LDVWRQHCVTTS
Sbjct: 241 XXXXEFRRCVEVVNHQXXXXXXXXXXXRNLDVWRQHCVTTS 261

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BLAST of CsaV3_2G004840 vs. TAIR10
Match: AT1G54740.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 99.4 bits (246), Expect = 3.8e-21
Identity = 57/115 (49.57%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 97  GLMSCTESLGFESSDERLVNDELTTMEDNCGGWCMSRV--RRRK------VVAEERKFPP 156
           GLM CTE LGFES D R+ ++E+             RV  +RRK      V A++++FPP
Sbjct: 35  GLMLCTEYLGFESYDMRMSDNEVENKMTCHAEVETERVEAKRRKTKENVVVQAQKKQFPP 94

Query: 157 PLTSLNQHGHPNFYLRSVRKDGRLELTEVRIERTEILRACRGDGRLRLHLIKDEE 204
           PL+SLN  G   FYLR VRKDGRLELT+V ++R EI    R DGRLRLH +   E
Sbjct: 95  PLSSLNSRGQRYFYLRPVRKDGRLELTQVMVDRPEIFHVSRVDGRLRLHFVDGVE 149

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BLAST of CsaV3_2G004840 vs. TAIR10
Match: AT3G63020.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 53.1 bits (126), Expect = 3.1e-07
Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 135 RRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIERTEILRACRGDGRL 194
           RR + V  +R  PP LT+L+ +G P F+ R VR +GRLE+  V ++  EI+ + RG   L
Sbjct: 122 RRGRSVTRKRDLPPFLTTLDCNGRPRFHHRRVRSEGRLEIASVAVDSPEIV-SVRGREGL 181

Query: 195 RLHLIKDEEQGE 207
           R+  ++  +Q +
Sbjct: 182 RIGTVRISQQND 192

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BLAST of CsaV3_2G004840 vs. TAIR10
Match: AT5G19260.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 0


Query: 98  LMSCTESLGFESSDERLVNDELTTME---DNCGGWCMS--RVRRRKVVAEERKFPPPLTS 157
           L  CTE+LG ES  +    DEL +++    N G        ++ RK        PPPLT+
Sbjct: 113 LALCTENLGSESGSDVTDIDELFSLDVQTKNLGETTTETRTLKSRKRSVSPSDLPPPLTT 172

Query: 158 LNQHGHPNFYLRSVRKDGRLELTEVRI-ERTEILRACRGDGRLRLHLIKDEEQ 205
           +   G     +R  R++GRL +T      R    +A R +GRLRL ++KD  +
Sbjct: 173 M--RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILKDSNE 223

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BLAST of CsaV3_2G004840 vs. TAIR10
Match: AT1G22110.1 (structural constituent of ribosome)

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-05
Identity = 27/61 (44.26%), Postives = 34/61 (55.74%), Query Frame = 0


Query: 144 RKFPPPLTSLNQHGH-----PNFYLRSVRKDGRLELTEVRIERTEILRACRGDGRLRLHL 200
           R+FPPP+  L Q G+     P    R V  DGRL L E ++   E  RA R +GRL LHL
Sbjct: 100 REFPPPIPLLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHL 159

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BLAST of CsaV3_2G004840 vs. TAIR10
Match: AT5G22390.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 46.2 bits (108), Expect = 3.8e-05
Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 136 RRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIERTEILRACRGDGRL 195
           RRK   E +++PP +T ++         ++ RK+GRL L EVRI R E LRA R DGRL
Sbjct: 128 RRK---ERKEYPPAMTRMS--------FKTYRKEGRLVLEEVRIPRREFLRASREDGRL 175

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BLAST of CsaV3_2G004840 vs. Swiss-Prot
Match: sp|Q6NMR8|FAF3_ARATH (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-05
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 0


Query: 98  LMSCTESLGFESSDERLVNDELTTME---DNCGGWCMS--RVRRRKVVAEERKFPPPLTS 157
           L  CTE+LG ES  +    DEL +++    N G        ++ RK        PPPLT+
Sbjct: 113 LALCTENLGSESGSDVTDIDELFSLDVQTKNLGETTTETRTLKSRKRSVSPSDLPPPLTT 172

Query: 158 LNQHGHPNFYLRSVRKDGRLELTEVRI-ERTEILRACRGDGRLRLHLIKDEEQ 205
           +   G     +R  R++GRL +T      R    +A R +GRLRL ++KD  +
Sbjct: 173 M--RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILKDSNE 223

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BLAST of CsaV3_2G004840 vs. TrEMBL
Match: tr|A0A0A0LJH1|A0A0A0LJH1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020850 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 4.9e-132
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MTTMMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHALGLGLINSDHTNATQFNK 60
           MTTMMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHALGLGLINSDHTNATQFNK
Sbjct: 1   MTTMMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHALGLGLINSDHTNATQFNK 60

Query: 61  SPNILESSSLIKPSLSSSRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDELT 120
           SPNILESSSLIKPSLSSSRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDELT
Sbjct: 61  SPNILESSSLIKPSLSSSRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDELT 120

Query: 121 TMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIE 180
           TMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIE
Sbjct: 121 TMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRIE 180

Query: 181 RTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKE 240
           RTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKE
Sbjct: 181 RTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKE 240

Query: 241 GKMEFRRCVEMIKHQRRHEXXXXXXXHLDVWRQHCVTTS 280
           GKMEFRRCVEMIKHQRRHEXXXXXXXHLDVWRQHCVTTS
Sbjct: 241 GKMEFRRCVEMIKHQRRHEXXXXXXXHLDVWRQHCVTTS 279

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BLAST of CsaV3_2G004840 vs. TrEMBL
Match: tr|A0A1S3C034|A0A1S3C034_CUCME (protein FANTASTIC FOUR 1 OS=Cucumis melo OX=3656 GN=LOC103495465 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 2.6e-109
Identity = 255/295 (86.44%), Postives = 256/295 (86.78%), Query Frame = 0


Query: 1   MTTMMSFYKKSLHSFLSFTDNLSSKTSPPFNNSNPHLELHHA-LGLGLINSDHTNATQFN 60
           MT MMSFYKKSLHSFLSFTDNLSSK SPPFNNSNPHLELHHA  GLGLINSDH NA Q N
Sbjct: 1   MTMMMSFYKKSLHSFLSFTDNLSSKPSPPFNNSNPHLELHHASSGLGLINSDHNNAMQSN 60

Query: 61  KSPNILESSSLIKPSLSSSRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVNDEL 120
           KSPNILESSSLIKP LSSSRKDPGGVGF+DDVGGGVDGLMSCTESLGFESSDERLVNDEL
Sbjct: 61  KSPNILESSSLIKPPLSSSRKDPGGVGFMDDVGGGVDGLMSCTESLGFESSDERLVNDEL 120

Query: 121 TTMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRI 180
           TTMEDNCGGWCMSRVRRRKVV EERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRI
Sbjct: 121 TTMEDNCGGWCMSRVRRRKVVTEERKFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEVRI 180

Query: 181 ERTEILRACRGDGRLRLHLIKDEEQGE-----------XXXXXXXXXXXXXXXXXXXXXX 240
           ERTEILRACRGDGRLRLHLIKDEEQGE           XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 ERTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXLVKEGKMEFRRCVEMI----KHQRRHEXXXXXXXHLDVWRQHCVTTS 280
           XXXXXXXX       EFRRCVEMI           XXXXXXX LDVWRQHCVTTS
Sbjct: 241 XXXXXXXXXXXXXXXEFRRCVEMIXXXXXXXXXXXXXXXXXXXLDVWRQHCVTTS 295

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BLAST of CsaV3_2G004840 vs. TrEMBL
Match: tr|W9SXK1|W9SXK1_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_020661 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.7e-44
Identity = 159/306 (51.96%), Postives = 195/306 (63.73%), Query Frame = 0


Query: 4   MMSFYKKSLHSFLSFT-DNLSSKTSPPFNNSNPHLELHHALGLGLINSDHTNATQFNKSP 63
           MMSF +KS+HS L  T  ++ +    P N  NP  +      LGL+ +  T+      SP
Sbjct: 1   MMSFCRKSVHSLLGLTAASVDAADHRPHNVLNPPWKCQ---ALGLVTA--TSEIIRRPSP 60

Query: 64  NILESSSLIK-----PSLSSSRKDPGGVGFIDDVGGGVDGLMSCTESLGFESSDERLVND 123
           N+LESSS+I      PS  + +KDP G+GFIDD+GGGVDGLMSCTESLGFESSDER V+D
Sbjct: 61  NVLESSSMISQNSPPPSPPTRKKDPRGIGFIDDIGGGVDGLMSCTESLGFESSDERRVDD 120

Query: 124 ---ELTTMEDNCGGWCMSRVRRRKVVA----EERKFPPPLTSLNQHGHPNFYLRSVRKDG 183
              E + + ++   W   +V+ RK ++    E ++FPP L+SLN++G P+F+LR VRKDG
Sbjct: 121 DEEEFSLVSNDERPWTSKKVKWRKRMSGSSKEVKRFPPLLSSLNRNGQPSFFLRPVRKDG 180

Query: 184 RLELTEVRIERTEILRACRGDGRLRLHLIKDEEQGEXXXXXXXXXXXXXXXXXXXXXXXX 243
           RLELTEVRI R EILRA RGDGRLRLHLI+D     XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RLELTEVRINRPEILRAYRGDGRLRLHLIRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 244 XXXXXXLV-----------KEGKME-------FRRCVEMIKHQRRHEXXXXXXXHLDVWR 279
           XXXXXX             +E K+        FRRC ++  H            HL VWR
Sbjct: 241 XXXXXXXXXXXXXXXXVNGEEWKIPVSSTGDGFRRCHDVANHHH----------HLHVWR 291

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BLAST of CsaV3_2G004840 vs. TrEMBL
Match: tr|A9PJD2|A9PJD2_9ROSI (Uncharacterized protein OS=Populus trichocarpa x Populus deltoides OX=3695 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.8e-42
Identity = 112/225 (49.78%), Postives = 141/225 (62.67%), Query Frame = 0


Query: 4   MMSFYKKSLHSFLSFTDN-LSSKTSPPFNNS--NPHLELH------HALGLGLINSDHTN 63
           MMSF KKS++SFL+ T + +S      +N+S   P  +         A G GLI +  T 
Sbjct: 1   MMSFCKKSVYSFLALTYHPMSVSIDGEYNSSVEKPSCKCQGVCSSPPAGGAGLITA--TT 60

Query: 64  ATQFNKSPNILESSSLIKPSLSSS----------------RKDPGGVGFIDDVGGGVDGL 123
               +K+PNILES++ IKPS  S+                +KDP G+GF+DD+GGG+DGL
Sbjct: 61  CDPIHKTPNILESTT-IKPSSPSTTPPHSPSPPSSIASIFKKDPRGIGFLDDIGGGIDGL 120

Query: 124 MSCTESLGFESSDERLVNDELTTMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGH 183
           MSCTESLGFESSDER  +DE+             + R+     E +KFPPPL+SLN +G 
Sbjct: 121 MSCTESLGFESSDERRFDDEIELCSRERSTITKVKCRKPGEKKEAKKFPPPLSSLNHNGQ 180

Query: 184 PNFYLRSVRKDGRLELTEVRIERTEILRACRGDGRLRLHLIKDEE 204
           PNF+L+SVRKDGRLELTEVRI R EILRA R DGRLRLH + DEE
Sbjct: 181 PNFFLKSVRKDGRLELTEVRIHRHEILRASRQDGRLRLHFVADEE 222

[Close]

BLAST of CsaV3_2G004840 vs. TrEMBL
Match: tr|A0A2K1Y025|A0A2K1Y025_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G027100v3 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 110/224 (49.11%), Postives = 141/224 (62.95%), Query Frame = 0


Query: 4   MMSFYKKSLHSFLSFTDN-LSSKTSPPFNNS--NPHLELH------HALGLGLINSDHTN 63
           MMSF KKS++SFL+ T + +S      +N+S   P  +         A G GL+ +  T 
Sbjct: 1   MMSFCKKSVYSFLALTYHPMSVSLDGEYNSSVEKPSCKCQGVCSSPPAGGAGLMTA--TT 60

Query: 64  ATQFNKSPNILESSSLIKPSLSSS----------------RKDPGGVGFIDDVGGGVDGL 123
               +K+PNILES++ IKPS  S+                +KDP G+GF+DD+GGG+DGL
Sbjct: 61  CDPIHKTPNILESTT-IKPSSPSTTPPHSPSPPSSIASIFKKDPRGIGFLDDIGGGIDGL 120

Query: 124 MSCTESLGFESSDERLVNDELTTMEDNCGGWCMSRVRRRKVVAEERKFPPPLTSLNQHGH 183
           MSCTESLGFESSDER  +DE+             + R+     E +KFPPPL+SLN +G 
Sbjct: 121 MSCTESLGFESSDERRFDDEIELCSRERSKITKVKCRKLGEKKEAKKFPPPLSSLNHNGQ 180

Query: 184 PNFYLRSVRKDGRLELTEVRIERTEILRACRGDGRLRLHLIKDE 203
           PNF+L+SVRKDGRLELTEVRI+R EILRA R DGRLRLH + DE
Sbjct: 181 PNFFLKSVRKDGRLELTEVRIDRHEILRASRQDGRLRLHFVADE 221

The following BLAST results are available for this feature:

BLAST of CsaV3_2G004840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648796.1	7.5e-132	100.00	PREDICTED: protein FANTASTIC FOUR 4 [Cucumis sativus] >KGN60862.1 hypothetical p...	[more]
XP_008455263.1	4.0e-109	86.44	PREDICTED: protein FANTASTIC FOUR 1 [Cucumis melo]	[more]
XP_022965897.1	2.7e-57	55.56	uncharacterized protein LOC111465645 [Cucurbita maxima]	[more]
XP_022937985.1	1.3e-51	55.36	uncharacterized protein LOC111444206 [Cucurbita moschata]	[more]
XP_023521579.1	4.9e-51	54.80	uncharacterized protein LOC111785403 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_2G004840 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54740.1	3.8e-21	49.57	Protein of unknown function (DUF3049)	[more]
AT3G63020.1	3.1e-07	37.50	Protein of unknown function (DUF3049)	[more]
AT5G19260.1	1.6e-06	32.74	Protein of unknown function (DUF3049)	[more]
AT1G22110.1	1.7e-05	44.26	structural constituent of ribosome	[more]
AT5G22390.1	3.8e-05	45.76	Protein of unknown function (DUF3049)	[more]

BLAST of CsaV3_2G004840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NMR8\|FAF3_ARATH	2.8e-05	32.74	Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1	[more]

BLAST of CsaV3_2G004840 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJH1\|A0A0A0LJH1_CUCSA	4.9e-132	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020850 PE=4 SV=1	[more]
tr\|A0A1S3C034\|A0A1S3C034_CUCME	2.6e-109	86.44	protein FANTASTIC FOUR 1 OS=Cucumis melo OX=3656 GN=LOC103495465 PE=4 SV=1	[more]
tr\|W9SXK1\|W9SXK1_9ROSA	1.7e-44	51.96	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_020661 PE=4 SV=1	[more]
tr\|A9PJD2\|A9PJD2_9ROSI	2.8e-42	49.78	Uncharacterized protein OS=Populus trichocarpa x Populus deltoides OX=3695 PE=2 ...	[more]
tr\|A0A2K1Y025\|A0A2K1Y025_POPTR	1.4e-41	49.11	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G027100v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G004840.1	CsaV3_2G004840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 220..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..238
None	No IPR available	PANTHER	PTHR33155:SF10	SUBFAMILY NOT NAMED	coord: 46..267
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 46..267
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 145..198 e-value: 6.9E-20 score: 70.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G004840	Cucsa.091850	Cucumber (Gy14) v1	cgycucB097
CsaV3_2G004840	CmaCh12G010910	Cucurbita maxima (Rimu)	cmacucB0202
CsaV3_2G004840	CmoCh12G011080	Cucurbita moschata (Rifu)	cmocucB0185
CsaV3_2G004840	Cp4.1LG07g09430	Cucurbita pepo (Zucchini)	cpecucB1014
CsaV3_2G004840	Carg17564	Silver-seed gourd	carcucB0754
CsaV3_2G004840	Cla019853	Watermelon (97103) v1	cucwmB159
CsaV3_2G004840	MELO3C004314	Melon (DHL92) v3.5.1	cucmeB141
CsaV3_2G004840	ClCG02G016130	Watermelon (Charleston Gray)	cucwcgB137
CsaV3_2G004840	Lsi11G005020	Bottle gourd (USVL1VR-Ls)	cuclsiB108
CsaV3_2G004840	MELO3C004314.2	Melon (DHL92) v3.6.1	cucmedB134
CsaV3_2G004840	Cla97C02G041970	Watermelon (97103) v2	cucwmbB123
CsaV3_2G004840	Bhi06G001464	Wax gourd	cucwgoB144

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G004840	Cucurbita maxima (Rimu)	cmacucB0934
CsaV3_2G004840	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G004840	Cucurbita moschata (Rifu)	cmocucB0924
CsaV3_2G004840	Cucurbita pepo (Zucchini)	cpecucB0010
CsaV3_2G004840	Cucurbita pepo (Zucchini)	cpecucB0114
CsaV3_2G004840	Wild cucumber (PI 183967)	cpicucB080