Cp4.1LG07g09430 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTTCGCCGACACCTTCTCTCCCAAATCCGCCCCCTCCGCCGCCGTGGCCGACGCCGACGCCGCCGCCGAACACCCCCTTCTCGGCTTGGGTTTGATTTCCGACAACAATCTCACCCAATTAAAATCCCCCAATATTCTCGAATCCTCCTCTGTTTTGAAGCCTCTCTGTTCCTCGCCGGCGACCCCCCGGCAGGATCCCGGCGGAGTTGGTTTCCTCGACGCCGTTGGCGGTGGCGTTGATGGGTTGATGTCGTGTACCGAGAGCCTTGGATTTGAAAGCTCCGATGAACGATTGGTTAATGATGAGATGATGGGTGTGGAAAATGGGGGAGATAGTGGTGGTGGGTGTACGGTTCGGGTGCGGCGGAGGAGGGTGGTGGTGAGGAGGTTTCCGCCGCCGTTGACGTCGTTGAATCAACATGGTCATCCGAATTTTTATCTCCGGTCGGTTAGGAAGGATGGGAGGTTGGAGCTGACTGAGGTGAAGATCGAACGGACGGAGATTCTTCGCGCGTGTCGCGAAGATGGACGGTTGAGATTGCATCTTATTAAGGATGAGGACGAGGAAGAGGAGGATAGGATTGAAGAGGAAGAGGTAGAAGAAGATGGGTTTGTGAAAGAAGGGCAGGTGGAATTCCGGCGGTGTGTTGAGGTGGTGAACCACCAGCGCCGCCGTGAGCACCACCGTGGCCACCACCACCGGAATTTGGATGTGTGGAGGCAGCACTGCGTGACAACGAGTTAAGATTTTTATTTATTTTTTATTTTTTATTTTATTAAAATTCAGTCGGTAGAATTTAATGAAGCGGTGGGTGTGCATAAAATTGAGATAATTATTATTATTATTATTTGAATTTATGGGGAGTGTCAATTTATTTATTTATTTAAAAAAAAAAAGTAATTTTTGAAATGGAATATTCTGGAATGCAATTTCCAAGGAAAAAAATCCACTTGCATTTTAAGTTATTTTATGTTATTTATTATTATTATTATTATTATTATTTATTTAAAAAATAAAACTTTAATATATATATATATATATATATATATATATTCTTAGTTTTATAATAATAACCTATCATGAATGAAGAGTAGAAAAGAGCCTTTTTGAGTAGAAAAGAGCCTTTTTGAGAAGGCTTTGTACCACTGATCGAGGTGATAAACGACAAACGGTCGAGAATCACCTCGATCACGATCGAGAGATTCTCGTGAAGTTTTAG ATGTCCTTCGCCGACACCTTCTCTCCCAAATCCGCCCCCTCCGCCGCCGTGGCCGACGCCGACGCCGCCGCCGAACACCCCCTTCTCGGCTTGGGTTTGATTTCCGACAACAATCTCACCCAATTAAAATCCCCCAATATTCTCGAATCCTCCTCTGTTTTGAAGCCTCTCTGTTCCTCGCCGGCGACCCCCCGGCAGGATCCCGGCGGAGTTGGTTTCCTCGACGCCGTTGGCGGTGGCGTTGATGGGTTGATGTCGTGTACCGAGAGCCTTGGATTTGAAAGCTCCGATGAACGATTGGTTAATGATGAGATGATGGGTGTGGAAAATGGGGGAGATAGTGGTGGTGGGTGTACGGTTCGGGTGCGGCGGAGGAGGGTGGTGGTGAGGAGGTTTCCGCCGCCGTTGACGTCGTTGAATCAACATGGTCATCCGAATTTTTATCTCCGGTCGGTTAGGAAGGATGGGAGGTTGGAGCTGACTGAGAAAAGAGCCTTTTTGAGAAGGCTTTGTACCACTGATCGAGGTGATAAACGACAAACGGTCGAGAATCACCTCGATCACGATCGAGAGATTCTCGTGAAGTTTTAG ATGTCCTTCGCCGACACCTTCTCTCCCAAATCCGCCCCCTCCGCCGCCGTGGCCGACGCCGACGCCGCCGCCGAACACCCCCTTCTCGGCTTGGGTTTGATTTCCGACAACAATCTCACCCAATTAAAATCCCCCAATATTCTCGAATCCTCCTCTGTTTTGAAGCCTCTCTGTTCCTCGCCGGCGACCCCCCGGCAGGATCCCGGCGGAGTTGGTTTCCTCGACGCCGTTGGCGGTGGCGTTGATGGGTTGATGTCGTGTACCGAGAGCCTTGGATTTGAAAGCTCCGATGAACGATTGGTTAATGATGAGATGATGGGTGTGGAAAATGGGGGAGATAGTGGTGGTGGGTGTACGGTTCGGGTGCGGCGGAGGAGGGTGGTGGTGAGGAGGTTTCCGCCGCCGTTGACGTCGTTGAATCAACATGGTCATCCGAATTTTTATCTCCGGTCGGTTAGGAAGGATGGGAGGTTGGAGCTGACTGAGAAAAGAGCCTTTTTGAGAAGGCTTTGTACCACTGATCGAGGTGATAAACGACAAACGGTCGAGAATCACCTCGATCACGATCGAGAGATTCTCGTGAAGTTTTAG MSFADTFSPKSAPSAAVADADAAAEHPLLGLGLISDNNLTQLKSPNILESSSVLKPLCSSPATPRQDPGGVGFLDAVGGGVDGLMSCTESLGFESSDERLVNDEMMGVENGGDSGGGCTVRVRRRRVVVRRFPPPLTSLNQHGHPNFYLRSVRKDGRLELTEKRAFLRRLCTTDRGDKRQTVENHLDHDREILVKF
BLAST of Cp4.1LG07g09430 vs. TrEMBL
Match: A0A0A0LJH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020850 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.2e-47 Identity = 119/196 (60.71%), Postives = 138/196 (70.41%), Query Frame = 1
BLAST of Cp4.1LG07g09430 vs. TrEMBL
Match: W9SXK1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020661 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.1e-27 Identity = 89/195 (45.64%), Postives = 116/195 (59.49%), Query Frame = 1
BLAST of Cp4.1LG07g09430 vs. TrEMBL
Match: A9PJD2_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.1e-27 Identity = 77/179 (43.02%), Postives = 104/179 (58.10%), Query Frame = 1
BLAST of Cp4.1LG07g09430 vs. TrEMBL
Match: B9I7Z7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s02810g PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.7e-27 Identity = 77/179 (43.02%), Postives = 103/179 (57.54%), Query Frame = 1
BLAST of Cp4.1LG07g09430 vs. TrEMBL
Match: B9RF07_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1430130 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26 Identity = 82/175 (46.86%), Postives = 108/175 (61.71%), Query Frame = 1
BLAST of Cp4.1LG07g09430 vs. TAIR10
Match: AT1G54740.1 (AT1G54740.1 Protein of unknown function (DUF3049)) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 1
BLAST of Cp4.1LG07g09430 vs. NCBI nr
Match: gi|778666706|ref|XP_011648796.1| (PREDICTED: protein FANTASTIC FOUR 4 [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 4.5e-47 Identity = 119/196 (60.71%), Postives = 138/196 (70.41%), Query Frame = 1
BLAST of Cp4.1LG07g09430 vs. NCBI nr
Match: gi|659070471|ref|XP_008455263.1| (PREDICTED: protein FANTASTIC FOUR 1 [Cucumis melo]) HSP 1 Score: 196.1 bits (497), Expect = 5.9e-47 Identity = 116/196 (59.18%), Postives = 135/196 (68.88%), Query Frame = 1
BLAST of Cp4.1LG07g09430 vs. NCBI nr
Match: gi|703157979|ref|XP_010111868.1| (hypothetical protein L484_020661 [Morus notabilis]) HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27 Identity = 89/195 (45.64%), Postives = 116/195 (59.49%), Query Frame = 1
BLAST of Cp4.1LG07g09430 vs. NCBI nr
Match: gi|802757189|ref|XP_012089128.1| (PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas]) HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27 Identity = 84/164 (51.22%), Postives = 105/164 (64.02%), Query Frame = 1
BLAST of Cp4.1LG07g09430 vs. NCBI nr
Match: gi|118489361|gb|ABK96485.1| (unknown [Populus trichocarpa x Populus deltoides]) HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27 Identity = 77/179 (43.02%), Postives = 104/179 (58.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|