CsaV3_2G004240 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G004240
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRibose-5-phosphate isomerase A
Locationchr2 : 2217511 .. 2219553 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTATATTTTTTCTTGGTCAGGGTTGCCTACCATAAGCAAAGAACGATTTGATCGAAAAACCGACCCCAATCTAACCTACATACACAAATATTTATTACAAGGCTAATTTAACAAAAAGGAAAAGCCTCCAAAGCCACCAAAATTGAATGAAGAGCTCCAACAACACCAAAAGTTTACCAACCCCAAATGTCCATTTCACAAACCACATCAAAACTAAAAAGTTCCATTCTTTTTTCCTTCATCTTTTTCAAAAACCTTTTATTAAAAAATCAAAAATCAAAAACCTATTTCTAAAAAATTGCAAAATTATTAGCCATTGAGAATTGGATAAGCAAAGTGAAGAGAAAAAGGAAGAACAAAGAACAAATTCTAAGAACACCAAAAGCGAAAAAAATCTCAAAACCCTATCCTTTTCTCATCAATGGCCTCCCTCTCCTTCATTTCTCCTCCTTCTATTTCCTCCTCTCGCCATGTTTCCTCCATAGCCAACCTTCTCCTCCGCTCCTCAAAACCCCTAAATCTCTCCACCCATTACCGCCCTCTCTCCGTCCACGCCCGCGTCTCCACTCTCACTCAAGACGACCTCAAGAAACTCGCCGCCGACAAAGCCGTCGAGTATGTCAAAAGCGGCATGGTCCTCGGCCTCGGCACCGGCTCCACTGCCGCCTTCGTCGTCGCTAAGATCGGCGAGCTTCTCAAGACTAATCAATTAACCGACATTGTAGGAATCCCCACCTCGAAACGAACGGAAGAACAAGCTAGGTCATTAGGAATTCCTCTCTCTGTATTAGACGACCATCCGCATCTCGATTTAGCTATCGATGGCGCTGATGAAGTCGATCCAGATCTGAATCTCGTCAAAGGCCGTGGCGGCGCTTTACTGCGTGAGAAGATGGTGGAGGCAGCATCCGATAAGTTCGTCGTCGTCGTTGATGACACTAAATTAGTCGATGGTCTAGGCGGGAGCGGTCTCGCGATGCCGGTTGAAGTTGTTCAATTTTGCTGGAAATACAATTTGGTGAGGCTTCAAGAGCTGTTTAAGGAGGAAGGTTGTGAGGCAAAACTCCGATTAGACGGCGACGAGAAGCCTTATGTTACCGATAACTCGAATTACATTGTGGATTTGTATTTCAAGACTCCGATTAAGGATGGATTGGCGGCCGGAAAAGAGATATCGTCGTTTGAAGGAGTGGTGGAGCATGGATTGTTTTTGGATATGGCGACCGCGGTGATCATCGCCGGAAAAGATGGGATTGATATCAAGAACAAATGATGATCTCTGTTTCCAGTAACTACTTCAATTGGTGAGTTCGTATGAAAAACTGTCACAATTTCTTCTTTGCAACTTTTTTGTTTTGTTTTTTGAGTTCATGATTTGTTGGTAAGAATGAGCTTGATTTCATCATTGTATTATAAGAAATGTTGTGGAAATTTTTGTTGATGGTGATGAAATGCTCAAAATTTGGGATGGGATAAATGTAAATTGTTAAATGAGGAAAGTAAAAACTATGGAATGTTATAAATTATATTGAAGGATAGAAGAATGAACAACATGAACATGAAGATGTGAGTATCAAATAATTGAATGAATTAATACTCAAATTATACTTTTCATCCAAGAATTGGTTAGTTTTACATTTAAAGTTAATGTCCCTTTTTTTCTTAATGAAAATGTCTTTTCCAAATTTCAAAAAAAAAAAAAAAGTTTTTAAAAGAACACTTTTTAAATATAGCAAAAATAAATAAATAAAACTATTTACAAAATAAAATTTTCATTTAACATGTATTTATCTTTTTCCTTTAAACATTTGACAAGAAGTGGGATTAATGAGTAGACAAGCAAATTAACCAATAAATTTCAATGGGTGGGTTGGCAACGTACTCATCATCCAAAGACAAATAAGTAATTTGTTCTTCACTAACACTTTACTTTCGATTTTAAAAGTAGTTTGAATTAATTTAAGAAAAAAGATTTTTTATTTAAACTTTTTAAATAAAAATTGTCTAAAACCTACCTAAAAAGCAATTCTTTTAAATGAAT

mRNA sequence

ATGGCCTCCCTCTCCTTCATTTCTCCTCCTTCTATTTCCTCCTCTCGCCATGTTTCCTCCATAGCCAACCTTCTCCTCCGCTCCTCAAAACCCCTAAATCTCTCCACCCATTACCGCCCTCTCTCCGTCCACGCCCGCGTCTCCACTCTCACTCAAGACGACCTCAAGAAACTCGCCGCCGACAAAGCCGTCGAGTATGTCAAAAGCGGCATGGTCCTCGGCCTCGGCACCGGCTCCACTGCCGCCTTCGTCGTCGCTAAGATCGGCGAGCTTCTCAAGACTAATCAATTAACCGACATTGTAGGAATCCCCACCTCGAAACGAACGGAAGAACAAGCTAGGTCATTAGGAATTCCTCTCTCTGTATTAGACGACCATCCGCATCTCGATTTAGCTATCGATGGCGCTGATGAAGTCGATCCAGATCTGAATCTCGTCAAAGGCCGTGGCGGCGCTTTACTGCGTGAGAAGATGGTGGAGGCAGCATCCGATAAGTTCGTCGTCGTCGTTGATGACACTAAATTAGTCGATGGTCTAGGCGGGAGCGGTCTCGCGATGCCGGTTGAAGTTGTTCAATTTTGCTGGAAATACAATTTGGTGAGGCTTCAAGAGCTGTTTAAGGAGGAAGGTTGTGAGGCAAAACTCCGATTAGACGGCGACGAGAAGCCTTATGTTACCGATAACTCGAATTACATTGTGGATTTGTATTTCAAGACTCCGATTAAGGATGGATTGGCGGCCGGAAAAGAGATATCGTCGTTTGAAGGAGTGGTGGAGCATGGATTGTTTTTGGATATGGCGACCGCGGTGATCATCGCCGGAAAAGATGGGATTGATATCAAGAACAAATGA

Coding sequence (CDS)

ATGGCCTCCCTCTCCTTCATTTCTCCTCCTTCTATTTCCTCCTCTCGCCATGTTTCCTCCATAGCCAACCTTCTCCTCCGCTCCTCAAAACCCCTAAATCTCTCCACCCATTACCGCCCTCTCTCCGTCCACGCCCGCGTCTCCACTCTCACTCAAGACGACCTCAAGAAACTCGCCGCCGACAAAGCCGTCGAGTATGTCAAAAGCGGCATGGTCCTCGGCCTCGGCACCGGCTCCACTGCCGCCTTCGTCGTCGCTAAGATCGGCGAGCTTCTCAAGACTAATCAATTAACCGACATTGTAGGAATCCCCACCTCGAAACGAACGGAAGAACAAGCTAGGTCATTAGGAATTCCTCTCTCTGTATTAGACGACCATCCGCATCTCGATTTAGCTATCGATGGCGCTGATGAAGTCGATCCAGATCTGAATCTCGTCAAAGGCCGTGGCGGCGCTTTACTGCGTGAGAAGATGGTGGAGGCAGCATCCGATAAGTTCGTCGTCGTCGTTGATGACACTAAATTAGTCGATGGTCTAGGCGGGAGCGGTCTCGCGATGCCGGTTGAAGTTGTTCAATTTTGCTGGAAATACAATTTGGTGAGGCTTCAAGAGCTGTTTAAGGAGGAAGGTTGTGAGGCAAAACTCCGATTAGACGGCGACGAGAAGCCTTATGTTACCGATAACTCGAATTACATTGTGGATTTGTATTTCAAGACTCCGATTAAGGATGGATTGGCGGCCGGAAAAGAGATATCGTCGTTTGAAGGAGTGGTGGAGCATGGATTGTTTTTGGATATGGCGACCGCGGTGATCATCGCCGGAAAAGATGGGATTGATATCAAGAACAAATGA

Protein sequence

MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK
Homology
[Close]
BLAST of CsaV3_2G004240 vs. NCBI nr
Match: XP_004139227.1 (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis sativus] >KGN60820.1 hypothetical protein Csa_2G011530 [Cucumis sativus])

HSP 1 Score: 550.1 bits (1416), Expect = 4.6e-153
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0 

Query: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAA 60
           MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAA
Sbjct: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAA 60

Query: 61  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL 120
           DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL
Sbjct: 61  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL 120

Query: 121 SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG 180
           SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG
Sbjct: 121 SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG 180

Query: 181 GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTP 240
           GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTP
Sbjct: 181 GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTP 240

Query: 241 IKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           IKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK
Sbjct: 241 IKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 283

[Close]
BLAST of CsaV3_2G004240 vs. NCBI nr
Match: XP_008455835.1 (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 540.4 bits (1391), Expect = 3.6e-150
Identity = 278/283 (98.23%), Postives = 281/283 (99.29%), Query Frame = 0 

Query: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAA 60
           MASLSFISPPS+SSSRHVSSIANLLLRSSKPLNLSTH RPLSVHARVSTLTQDDLKKLAA
Sbjct: 1   MASLSFISPPSLSSSRHVSSIANLLLRSSKPLNLSTHCRPLSVHARVSTLTQDDLKKLAA 60

Query: 61  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL 120
           DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL
Sbjct: 61  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL 120

Query: 121 SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG 180
           SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG
Sbjct: 121 SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG 180

Query: 181 GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTP 240
           GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRL+GD KPYVTDNSNYIVDLYFKTP
Sbjct: 181 GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLEGDGKPYVTDNSNYIVDLYFKTP 240

Query: 241 IKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           IKDGLAAGKEIS+FEGVVEHGLFLDMATAVIIAGKDGIDIKNK
Sbjct: 241 IKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 283

[Close]
BLAST of CsaV3_2G004240 vs. NCBI nr
Match: XP_023545552.1 (probable ribose-5-phosphate isomerase 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510.8 bits (1314), Expect = 3.1e-141
Identity = 265/284 (93.31%), Postives = 274/284 (96.48%), Query Frame = 0 

Query: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHAR-VSTLTQDDLKKLA 60
           MASLSFISPPS+SSSRHVSSIANLLLRS K +NLS H RPLSV AR VSTLTQDDLKKLA
Sbjct: 1   MASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRPLSVQARSVSTLTQDDLKKLA 60

Query: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIP 120
           ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+NQL DIVGIPTSKRTEEQARSLGIP
Sbjct: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQARSLGIP 120

Query: 121 LSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGL 180
           LSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVD+TKLVDGL
Sbjct: 121 LSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDETKLVDGL 180

Query: 181 GGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKT 240
           GGSGLAMPVEVVQFCWK+NLVRLQ+LFK+EGCEAKLRL+ D KPYVTDNSNYIVDLYFKT
Sbjct: 181 GGSGLAMPVEVVQFCWKHNLVRLQDLFKDEGCEAKLRLEADGKPYVTDNSNYIVDLYFKT 240

Query: 241 PIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           PIKDGLAAGKEIS+FEGVVEHGLFLDMATAVIIAGKDGIDIK K
Sbjct: 241 PIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 284

[Close]
BLAST of CsaV3_2G004240 vs. NCBI nr
Match: XP_022143009.1 (probable ribose-5-phosphate isomerase 3, chloroplastic [Momordica charantia])

HSP 1 Score: 509.6 bits (1311), Expect = 6.8e-141
Identity = 266/288 (92.36%), Postives = 276/288 (95.83%), Query Frame = 0 

Query: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLST----HYRPLSVHAR-VSTLTQDDL 60
           MASLS ISPPS+SSSRHVSSIANLLLRS KPLNLS     H RPLSVHAR VSTLTQDDL
Sbjct: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNPHHCRPLSVHARSVSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARS 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTN+L+DIVGIPTSKRTEEQAR+
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNELSDIVGIPTSKRTEEQARA 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDL 240
           V+GLGGSGLAMPVEVVQFCWKYNLVRLQ+LFK+EGCEAKLRLD D KPYVTDNSNYIVDL
Sbjct: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEGCEAKLRLDADGKPYVTDNSNYIVDL 240

Query: 241 YFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           YF++PIKDGLAAGKEIS+FEGVVEHGLFLDMATAVIIAGKDGIDIK K
Sbjct: 241 YFQSPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 288

[Close]
BLAST of CsaV3_2G004240 vs. NCBI nr
Match: XP_022946837.1 (probable ribose-5-phosphate isomerase 3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 509.2 bits (1310), Expect = 8.9e-141
Identity = 264/284 (92.96%), Postives = 273/284 (96.13%), Query Frame = 0 

Query: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHAR-VSTLTQDDLKKLA 60
           MASLSFISPPS+SSSRHVSSIANLLLRS K +NLS H RPLSV AR VSTLTQDDLKKLA
Sbjct: 1   MASLSFISPPSLSSSRHVSSIANLLLRSPKSINLSAHCRPLSVQARSVSTLTQDDLKKLA 60

Query: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIP 120
           ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+NQL DIVGIPTSKRTEEQARSLGIP
Sbjct: 61  ADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLRDIVGIPTSKRTEEQARSLGIP 120

Query: 121 LSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGL 180
           LSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVD+TKLVDGL
Sbjct: 121 LSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDETKLVDGL 180

Query: 181 GGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKT 240
           GGSGLAMPVEVVQFCWK+NLVRLQ+LFK+EGCEAKLRL+ D KPYVTDNSNYIVDLYFKT
Sbjct: 181 GGSGLAMPVEVVQFCWKHNLVRLQDLFKDEGCEAKLRLEADGKPYVTDNSNYIVDLYFKT 240

Query: 241 PIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           PIKDGLAAGKEIS+FEGVVEHGLFLDMAT VIIAGKDGIDIK K
Sbjct: 241 PIKDGLAAGKEISAFEGVVEHGLFLDMATVVIIAGKDGIDIKTK 284

[Close]
BLAST of CsaV3_2G004240 vs. TAIR10
Match: AT3G04790.1 (Ribose 5-phosphate isomerase, type A protein)

HSP 1 Score: 384.0 bits (985), Expect = 7.8e-107
Identity = 202/283 (71.38%), Postives = 232/283 (81.98%), Query Frame = 0 

Query: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAA 60
           MASLSF+S  S   +    SIA     SS   ++S      SV A+   L+QDDLKKLAA
Sbjct: 1   MASLSFVS--SSHLTLRTPSIALRSTGSSPRTSVS-----FSVKAQSVALSQDDLKKLAA 60

Query: 61  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL 120
           +KAVE +K GMVLGLGTGSTAAF V +IG+LL + +L DIVGIPTSKRTEEQARSLGIPL
Sbjct: 61  EKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQARSLGIPL 120

Query: 121 SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG 180
             LD HP +DLAIDGADEVDP+L+LVKGRGGALLREKMVEA +DKF+VV DDTKLV GLG
Sbjct: 121 VGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVADDTKLVTGLG 180

Query: 181 GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTP 240
           GSGLAMPVEVVQFCW +NL+RLQ+LFKE GCE+KLR+DGD KPYVTDNSNYI+DLYFKTP
Sbjct: 181 GSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCESKLRVDGDGKPYVTDNSNYIIDLYFKTP 240

Query: 241 IKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           +KDG AA KEI  F+GVVEHGLFL MAT+VIIAGK+G+++  K
Sbjct: 241 LKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNGVEVMTK 276

[Close]
BLAST of CsaV3_2G004240 vs. TAIR10
Match: AT2G01290.1 (ribose-5-phosphate isomerase 2)

HSP 1 Score: 295.4 bits (755), Expect = 3.7e-80
Identity = 150/234 (64.10%), Postives = 184/234 (78.63%), Query Frame = 0 

Query: 50  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRT 109
           LTQD+LK++AA KAVE+V+SGMVLGLGTGSTA   V +IGELL+  +L +IVGIPTSK+T
Sbjct: 31  LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKT 90

Query: 110 EEQARSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVV 169
           +EQA SLGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS KFVV+
Sbjct: 91  QEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVI 150

Query: 170 VDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNS 229
           VDD+K+V  +GGS LA+PVE+V FCWK+   +L+ L +  GCEA LRL    K +VTDN 
Sbjct: 151 VDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKAFVTDNG 210

Query: 230 NYIVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           NYIVD++ +  + D  A    I    GVVEHG+FLDMA+ VIIAG+ G+ IKNK
Sbjct: 211 NYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKIKNK 264

[Close]
BLAST of CsaV3_2G004240 vs. TAIR10
Match: AT1G71100.1 (Ribose 5-phosphate isomerase, type A protein)

HSP 1 Score: 292.4 bits (747), Expect = 3.1e-79
Identity = 151/242 (62.40%), Postives = 189/242 (78.10%), Query Frame = 0 

Query: 47  VSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTS 106
           +S LTQ++LKK+AA KAVE+V+SGMV+GLGTGSTA   VA+I ELL+  +L DI+GIPTS
Sbjct: 24  LSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTS 83

Query: 107 KRTEEQARSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKF 166
             T EQA SLGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS KF
Sbjct: 84  TTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGASKKF 143

Query: 167 VVVVDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRL----DGDE- 226
           VV+VD++KLV  +GGSGLA+PVEVV FC  +   +L+ELF++ GC AKLR+    +G+E 
Sbjct: 144 VVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNGEEA 203

Query: 227 KPYVTDNSNYIVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIK 284
            P VTDN NY+VDLY +  I D   A + I  F GVVEHG+FL MAT +I+AGK G+ +K
Sbjct: 204 APAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFGVTVK 263

[Close]
BLAST of CsaV3_2G004240 vs. TAIR10
Match: AT5G44520.1 (NagB/RpiA/CoA transferase-like superfamily protein)

HSP 1 Score: 104.8 bits (260), Expect = 9.2e-23
Identity = 69/222 (31.08%), Postives = 112/222 (50.45%), Query Frame = 0 

Query: 66  YVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPLSVLDD 125
           YVKSGM++GLG+G  + F +  +G+ L +  L ++VG+P S R+  +A   GIPL    D
Sbjct: 51  YVKSGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAAKYGIPLEYYRD 110

Query: 126 HPHLDLAIDGADEVDPD-LNLVKGRGGA------LLREKMVEAASDKFVVVVDDTKLVDG 185
              +D A   AD V+ + L  V GR  +      +L++K +   +D+ V ++ + +   G
Sbjct: 111 GVQIDFAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAVFMIKEEQYKAG 170

Query: 186 LGGSGLAMPVEVVQFCWKYNLVRLQELF-------KEEGCEAKLRLDGDEKPYVTDNSNY 245
           L GS   +PV V    W      + +L+       +    E +  L GD  P VT + + 
Sbjct: 171 LEGS---IPVLVQSLNWLAIAEEIDDLYLGDAEVWRRASVENEGPLGGD-FPIVTSDGHN 230

Query: 246 IVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIA 274
           I+D+ F TPI+        +   +GVV+HGL +     V+IA
Sbjct: 231 ILDVIFTTPIRSLADLATSLDKIDGVVDHGLIIKTRCTVVIA 268

[Close]
BLAST of CsaV3_2G004240 vs. Swiss-Prot
Match: sp|Q9S726|RPI3_ARATH (Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPI3 PE=1 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.4e-105
Identity = 202/283 (71.38%), Postives = 232/283 (81.98%), Query Frame = 0 

Query: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAA 60
           MASLSF+S  S   +    SIA     SS   ++S      SV A+   L+QDDLKKLAA
Sbjct: 1   MASLSFVS--SSHLTLRTPSIALRSTGSSPRTSVS-----FSVKAQSVALSQDDLKKLAA 60

Query: 61  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL 120
           +KAVE +K GMVLGLGTGSTAAF V +IG+LL + +L DIVGIPTSKRTEEQARSLGIPL
Sbjct: 61  EKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQARSLGIPL 120

Query: 121 SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG 180
             LD HP +DLAIDGADEVDP+L+LVKGRGGALLREKMVEA +DKF+VV DDTKLV GLG
Sbjct: 121 VGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVADDTKLVTGLG 180

Query: 181 GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTP 240
           GSGLAMPVEVVQFCW +NL+RLQ+LFKE GCE+KLR+DGD KPYVTDNSNYI+DLYFKTP
Sbjct: 181 GSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCESKLRVDGDGKPYVTDNSNYIIDLYFKTP 240

Query: 241 IKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           +KDG AA KEI  F+GVVEHGLFL MAT+VIIAGK+G+++  K
Sbjct: 241 LKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNGVEVMTK 276

[Close]
BLAST of CsaV3_2G004240 vs. Swiss-Prot
Match: sp|Q9ZU38|RPI2_ARATH (Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=RPI2 PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.6e-79
Identity = 150/234 (64.10%), Postives = 184/234 (78.63%), Query Frame = 0 

Query: 50  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRT 109
           LTQD+LK++AA KAVE+V+SGMVLGLGTGSTA   V +IGELL+  +L +IVGIPTSK+T
Sbjct: 31  LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKT 90

Query: 110 EEQARSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVV 169
           +EQA SLGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS KFVV+
Sbjct: 91  QEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVI 150

Query: 170 VDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNS 229
           VDD+K+V  +GGS LA+PVE+V FCWK+   +L+ L +  GCEA LRL    K +VTDN 
Sbjct: 151 VDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKAFVTDNG 210

Query: 230 NYIVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           NYIVD++ +  + D  A    I    GVVEHG+FLDMA+ VIIAG+ G+ IKNK
Sbjct: 211 NYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKIKNK 264

[Close]
BLAST of CsaV3_2G004240 vs. Swiss-Prot
Match: sp|Q9C998|RPI1_ARATH (Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=RPI1 PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.6e-78
Identity = 151/242 (62.40%), Postives = 189/242 (78.10%), Query Frame = 0 

Query: 47  VSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTS 106
           +S LTQ++LKK+AA KAVE+V+SGMV+GLGTGSTA   VA+I ELL+  +L DI+GIPTS
Sbjct: 24  LSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGIPTS 83

Query: 107 KRTEEQARSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKF 166
             T EQA SLGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS KF
Sbjct: 84  TTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGASKKF 143

Query: 167 VVVVDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRL----DGDE- 226
           VV+VD++KLV  +GGSGLA+PVEVV FC  +   +L+ELF++ GC AKLR+    +G+E 
Sbjct: 144 VVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNGEEA 203

Query: 227 KPYVTDNSNYIVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIK 284
            P VTDN NY+VDLY +  I D   A + I  F GVVEHG+FL MAT +I+AGK G+ +K
Sbjct: 204 APAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFGVTVK 263

[Close]
BLAST of CsaV3_2G004240 vs. Swiss-Prot
Match: sp|Q2JSC9|RPIA_SYNJA (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=rpiA PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.3e-54
Identity = 115/228 (50.44%), Postives = 158/228 (69.30%), Query Frame = 0 

Query: 53  DDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQ 112
           D+LK+ AA  A + V+SGMV+GLGTGSTAAF V  + + ++   L   +G+PTS+RT EQ
Sbjct: 5   DELKQAAAQAAAQKVQSGMVVGLGTGSTAAFAVGALAQRMQKEGL-QFIGVPTSERTAEQ 64

Query: 113 ARSLGIPLSVLDDHPHLDLAIDGADEVD-PDLNLVKGRGGALLREKMVEAASDKFVVVVD 172
           ARSLGIPL+ L++ P LDLAIDGADE++   LNL+KG GGALLREK+VEA++ + +++ D
Sbjct: 65  ARSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIAD 124

Query: 173 DTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNY 232
            +K V  L G+   +PVEVV+F WK  L R++ L    GC+A LR   +  PY+TD  +Y
Sbjct: 125 ASKKVAHL-GTRFPVPVEVVRFGWKTTLARVEAL----GCQAVLRRTAEGDPYLTDEQHY 184

Query: 233 IVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGID 280
           I+D  F  PI +     +++    GVVEHGLF+ MAT  IIAG +GI+
Sbjct: 185 ILDCQF-GPIANPAKLAEQLKGTVGVVEHGLFIGMATEAIIAGPEGIE 225

[Close]
BLAST of CsaV3_2G004240 vs. Swiss-Prot
Match: sp|B8FL28|RPIA_DESAA (Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) OX=439235 GN=rpiA PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 9.6e-54
Identity = 119/228 (52.19%), Postives = 154/228 (67.54%), Query Frame = 0 

Query: 51  TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTE 110
           +QD LKK AA+KAVEY++SGMV+GLG+GSTA F +  I  L+K  +L DIVGIP+S  TE
Sbjct: 3   SQDALKKQAAEKAVEYLESGMVVGLGSGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTE 62

Query: 111 EQARSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVV 170
           E ARSLGIPL   ++H  +D+ IDGADEVDPDLNL+KG GGALLREK+V  A+ K +++V
Sbjct: 63  EVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIV 122

Query: 171 DDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSN 230
           D++K+ D L G+  A+PVEVV F        L+ L    G +  +R +   K + TDN N
Sbjct: 123 DESKISDKL-GTIFALPVEVVPFATASETRFLESL----GAKVTVRENQLGKAFKTDNHN 182

Query: 231 YIVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGI 279
            I+D  F  P+ D +  G  +S   GVVEHGLFL     VI+AG DGI
Sbjct: 183 RILDADF-GPMDDAVKIGMALSQRAGVVEHGLFLGTTALVIVAGADGI 224

[Close]
BLAST of CsaV3_2G004240 vs. TrEMBL
Match: tr|A0A0A0LFJ4|A0A0A0LFJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011530 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 3.0e-153
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0 

Query: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAA 60
           MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAA
Sbjct: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAA 60

Query: 61  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL 120
           DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL
Sbjct: 61  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL 120

Query: 121 SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG 180
           SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG
Sbjct: 121 SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG 180

Query: 181 GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTP 240
           GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTP
Sbjct: 181 GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTP 240

Query: 241 IKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           IKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK
Sbjct: 241 IKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 283

[Close]
BLAST of CsaV3_2G004240 vs. TrEMBL
Match: tr|A0A1S3C1T5|A0A1S3C1T5_CUCME (probable ribose-5-phosphate isomerase 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495934 PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 2.4e-150
Identity = 278/283 (98.23%), Postives = 281/283 (99.29%), Query Frame = 0 

Query: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHYRPLSVHARVSTLTQDDLKKLAA 60
           MASLSFISPPS+SSSRHVSSIANLLLRSSKPLNLSTH RPLSVHARVSTLTQDDLKKLAA
Sbjct: 1   MASLSFISPPSLSSSRHVSSIANLLLRSSKPLNLSTHCRPLSVHARVSTLTQDDLKKLAA 60

Query: 61  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL 120
           DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL
Sbjct: 61  DKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARSLGIPL 120

Query: 121 SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG 180
           SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG
Sbjct: 121 SVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVDGLG 180

Query: 181 GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDLYFKTP 240
           GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRL+GD KPYVTDNSNYIVDLYFKTP
Sbjct: 181 GSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLEGDGKPYVTDNSNYIVDLYFKTP 240

Query: 241 IKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           IKDGLAAGKEIS+FEGVVEHGLFLDMATAVIIAGKDGIDIKNK
Sbjct: 241 IKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 283

[Close]
BLAST of CsaV3_2G004240 vs. TrEMBL
Match: tr|A0A2P5ENM2|A0A2P5ENM2_9ROSA (Ribose 5-phosphate isomerase, type A OS=Trema orientalis OX=63057 GN=TorRG33x02_170750 PE=3 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 3.6e-122
Identity = 233/294 (79.25%), Postives = 254/294 (86.39%), Query Frame = 0 

Query: 2   ASLSFISPPSISSSR-----------HVSSIANLLLRSSKPLNLSTHYRPLSVHAR-VST 61
           +SLS +SPPS+SS++                   +LR+ KPL+L TH RP+SV ++    
Sbjct: 4   SSLSLLSPPSLSSTQLHNXXXXXXXXXXXXXXXXILRTPKPLHLRTHRRPMSVRSQSAPV 63

Query: 62  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRT 121
           LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAK+G+LL + +LTDIVGIPTSKRT
Sbjct: 64  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKLGQLLSSGELTDIVGIPTSKRT 123

Query: 122 EEQARSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVV 181
           EEQAR LGIPLSVLDDHP LDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS+KFVVV
Sbjct: 124 EEQARELGIPLSVLDDHPRLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASEKFVVV 183

Query: 182 VDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNS 241
            D+TKLV GLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEG EAKLRLDGD KPYVTDNS
Sbjct: 184 ADETKLVSGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGVEAKLRLDGDGKPYVTDNS 243

Query: 242 NYIVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           NYIVDLYFKTPI+DGLAAGKEIS+ EGVVEHGLFLDMATAVIIAG  G+D+K K
Sbjct: 244 NYIVDLYFKTPIRDGLAAGKEISALEGVVEHGLFLDMATAVIIAGTTGVDVKTK 297

[Close]
BLAST of CsaV3_2G004240 vs. TrEMBL
Match: tr|A0A2P5DKN6|A0A2P5DKN6_PARAD (Ribose 5-phosphate isomerase, type A OS=Parasponia andersonii OX=3476 GN=PanWU01x14_054140 PE=3 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 5.2e-121
Identity = 231/294 (78.57%), Postives = 252/294 (85.71%), Query Frame = 0 

Query: 2   ASLSFISPPSISSSR-----------HVSSIANLLLRSSKPLNLSTHYRPLSVHAR-VST 61
           +SLS +SPPS+SS++                      + KPL+L TH+RP+SV ++    
Sbjct: 4   SSLSLLSPPSLSSTQLHNAXXXXXXXXXXXXXXXXXXTPKPLHLRTHHRPMSVRSQSAPV 63

Query: 62  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRT 121
           LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAK+G+LL + +LTDIVGIPTSKRT
Sbjct: 64  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKLGQLLSSGELTDIVGIPTSKRT 123

Query: 122 EEQARSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVV 181
           EEQAR LGIPLSVLDDHP LDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS+KFVVV
Sbjct: 124 EEQARELGIPLSVLDDHPRLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASEKFVVV 183

Query: 182 VDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNS 241
            D+TKLV GLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEG EAKLRLDGD KPYVTDNS
Sbjct: 184 ADETKLVSGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGVEAKLRLDGDGKPYVTDNS 243

Query: 242 NYIVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           NYIVDLYFKTPI+DGLAAGKEIS+ EGVVEHGLFLDMATAVIIAG  G+D+K K
Sbjct: 244 NYIVDLYFKTPIRDGLAAGKEISALEGVVEHGLFLDMATAVIIAGTTGVDVKTK 297

[Close]
BLAST of CsaV3_2G004240 vs. TrEMBL
Match: tr|F6HTS6|F6HTS6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0030g01900 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.8e-119
Identity = 235/288 (81.60%), Postives = 254/288 (88.19%), Query Frame = 0 

Query: 1   MASLSFISPP---SISSSRHVSSIANLLLRSSKPLNLSTHYRP-LSVHA-RVSTLTQDDL 60
           MA+LS +SPP   S+SS  H ++++   LR+S  L   T  RP LS+ A     LTQDDL
Sbjct: 1   MATLSLLSPPKSHSLSSLHHRNALS---LRTSSTLTPRT--RPLLSIRAFSAPALTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARS 120
           KKLAADKAV+YVKSGMVLGLGTGSTAAFVVAK+G LLKT QL+DIVG+PTSKRTEEQA S
Sbjct: 61  KKLAADKAVDYVKSGMVLGLGTGSTAAFVVAKLGHLLKTGQLSDIVGVPTSKRTEEQALS 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLD HP +DLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDHHPSIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDL 240
           V+GLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRL+ D KPYVTDNSNYIVDL
Sbjct: 181 VNGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLNPDGKPYVTDNSNYIVDL 240

Query: 241 YFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 284
           YFKTPIKD +AAGKEISSFEGVVEHGLFLDMATAVIIAGKDG+ +K K
Sbjct: 241 YFKTPIKDSIAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGVTVKTK 283

The following BLAST results are available for this feature:
BLAST of CsaV3_2G004240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139227.14.6e-153100.00PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis sativ... [more]
XP_008455835.13.6e-15098.23PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis melo][more]
XP_023545552.13.1e-14193.31probable ribose-5-phosphate isomerase 3, chloroplastic [Cucurbita pepo subsp. pe... [more]
XP_022143009.16.8e-14192.36probable ribose-5-phosphate isomerase 3, chloroplastic [Momordica charantia][more]
XP_022946837.18.9e-14192.96probable ribose-5-phosphate isomerase 3, chloroplastic [Cucurbita moschata][more]
BLAST of CsaV3_2G004240 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04790.17.8e-10771.38Ribose 5-phosphate isomerase, type A protein[more]
AT2G01290.13.7e-8064.10ribose-5-phosphate isomerase 2[more]
AT1G71100.13.1e-7962.40Ribose 5-phosphate isomerase, type A protein[more]
AT5G44520.19.2e-2331.08NagB/RpiA/CoA transferase-like superfamily protein[more]
BLAST of CsaV3_2G004240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9S726|RPI3_ARATH1.4e-10571.38Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana O... [more]
sp|Q9ZU38|RPI2_ARATH6.6e-7964.10Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=RPI2 ... [more]
sp|Q9C998|RPI1_ARATH5.6e-7862.40Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=RPI1 ... [more]
sp|Q2JSC9|RPIA_SYNJA3.3e-5450.44Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 ... [more]
sp|B8FL28|RPIA_DESAA9.6e-5452.19Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) ... [more]
BLAST of CsaV3_2G004240 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LFJ4|A0A0A0LFJ4_CUCSA3.0e-153100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G011530 PE=3 SV=1[more]
tr|A0A1S3C1T5|A0A1S3C1T5_CUCME2.4e-15098.23probable ribose-5-phosphate isomerase 3, chloroplastic OS=Cucumis melo OX=3656 G... [more]
tr|A0A2P5ENM2|A0A2P5ENM2_9ROSA3.6e-12279.25Ribose 5-phosphate isomerase, type A OS=Trema orientalis OX=63057 GN=TorRG33x02_... [more]
tr|A0A2P5DKN6|A0A2P5DKN6_PARAD5.2e-12178.57Ribose 5-phosphate isomerase, type A OS=Parasponia andersonii OX=3476 GN=PanWU01... [more]
tr|F6HTS6|F6HTS6_VITVI2.8e-11981.60Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0030g01900 PE=3 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009052pentose-phosphate shunt, non-oxidative branch
Vocabulary: Molecular Function
TermDefinition
GO:0004751ribose-5-phosphate isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR037171NagB/RpiA_transferase-like
IPR020672Ribose5P_isomerase_typA_subgr
IPR004788Ribose5P_isomerase_typA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015976 carbon utilization
biological_process GO:0009052 pentose-phosphate shunt, non-oxidative branch
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0019748 secondary metabolic process
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009735 response to cytokinin
biological_process GO:0009409 response to cold
biological_process GO:0010200 response to chitin
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0006546 glycine catabolic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0050832 defense response to fungus
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0000165 MAPK cascade
cellular_component GO:0005575 cellular_component
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0004751 ribose-5-phosphate isomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G004240.1CsaV3_2G004240.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.70.260coord: 178..261
e-value: 1.4E-79
score: 268.5
NoneNo IPR availableGENE3DG3DSA:3.40.50.1360coord: 56..177
e-value: 1.4E-79
score: 268.5
coord: 262..277
e-value: 1.4E-79
score: 268.5
NoneNo IPR availablePANTHERPTHR43748FAMILY NOT NAMEDcoord: 49..283
NoneNo IPR availablePANTHERPTHR43748:SF3RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATEDcoord: 49..283
NoneNo IPR availableSUPERFAMILYSSF75445D-ribose-5-phosphate isomerase (RpiA), lid domaincoord: 184..264
IPR004788Ribose 5-phosphate isomerase, type APFAMPF06026Rib_5-P_isom_Acoord: 102..277
e-value: 2.4E-62
score: 209.5
IPR004788Ribose 5-phosphate isomerase, type ATIGRFAMTIGR00021TIGR00021coord: 55..278
e-value: 2.4E-78
score: 260.4
IPR004788Ribose 5-phosphate isomerase, type ACDDcd01398RPI_Acoord: 55..274
e-value: 5.55392E-100
score: 293.609
IPR020672Ribose-5-phosphate isomerase, type A, subgroupHAMAPMF_00170Rib_5P_isom_Acoord: 52..281
score: 30.666
IPR037171NagB/RpiA transferase-likeSUPERFAMILYSSF100950NagB/RpiA/CoA transferase-likecoord: 51..193
coord: 224..234

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G004240CSPI02G03100Wild cucumber (PI 183967)cpicucB080
CsaV3_2G004240Cucsa.133370Cucumber (Gy14) v1cgycucB190
CsaV3_2G004240CmaCh12G011140Cucurbita maxima (Rimu)cmacucB0202
CsaV3_2G004240CmaCh05G011930Cucurbita maxima (Rimu)cmacucB0934
CsaV3_2G004240CmoCh05G012160Cucurbita moschata (Rifu)cmocucB0924
CsaV3_2G004240CmoCh12G011320Cucurbita moschata (Rifu)cmocucB0185
CsaV3_2G004240CsGy2G003210Cucumber (Gy14) v2cgybcucB064
CsaV3_2G004240Carg23443Silver-seed gourdcarcucB0330
CsaV3_2G004240Carg17590Silver-seed gourdcarcucB0754
CsaV3_2G004240Cla019816Watermelon (97103) v1cucwmB159
CsaV3_2G004240MELO3C004370Melon (DHL92) v3.5.1cucmeB141
CsaV3_2G004240ClCG02G016530Watermelon (Charleston Gray)cucwcgB137
CsaV3_2G004240Lsi11G004590Bottle gourd (USVL1VR-Ls)cuclsiB108
CsaV3_2G004240MELO3C004370.2Melon (DHL92) v3.6.1cucmedB134
CsaV3_2G004240Cla97C02G042310Watermelon (97103) v2cucwmbB123
CsaV3_2G004240Bhi06G001510Wax gourdcucwgoB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G004240Cucumber (Gy14) v2cgybcucB321
CsaV3_2G004240Cucurbita maxima (Rimu)cmacucB0131
CsaV3_2G004240Cucurbita maxima (Rimu)cmacucB0278
CsaV3_2G004240Cucurbita maxima (Rimu)cmacucB1044
CsaV3_2G004240Cucurbita moschata (Rifu)cmocucB0118
CsaV3_2G004240Cucurbita moschata (Rifu)cmocucB0419
CsaV3_2G004240Cucurbita moschata (Rifu)cmocucB1027
CsaV3_2G004240Cucurbita pepo (Zucchini)cpecucB0005
CsaV3_2G004240Cucurbita pepo (Zucchini)cpecucB0010
CsaV3_2G004240Cucurbita pepo (Zucchini)cpecucB0114
CsaV3_2G004240Cucurbita pepo (Zucchini)cpecucB0378
CsaV3_2G004240Cucurbita pepo (Zucchini)cpecucB1014
CsaV3_2G004240Wild cucumber (PI 183967)cpicucB389
CsaV3_2G004240Bottle gourd (USVL1VR-Ls)cuclsiB123
CsaV3_2G004240Melon (DHL92) v3.5.1cucmeB148
CsaV3_2G004240Melon (DHL92) v3.6.1cucmedB141
CsaV3_2G004240Watermelon (Charleston Gray)cucwcgB110
CsaV3_2G004240Watermelon (97103) v1cucwmB119
CsaV3_2G004240Watermelon (97103) v2cucwmbB172
CsaV3_2G004240Wax gourdcucwgoB213
CsaV3_2G004240Cucumber (Chinese Long) v3cuccucB072
CsaV3_2G004240Cucumber (Chinese Long) v3cuccucB103