CmoCh12G011320 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G011320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Chloroplast ribose-5-phosphate isomerase
Location	Cmo_Chr12 : 10327124 .. 10327990 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCTCTCTCTCATCTCCCCTCCTTCTCTCTCTTCCTCCCGCCATGTTTCCTCCATAGCCAACCTTCTTCTCCGATCACCAAAGCCTCTTAATCTTTCCGCTCATAACCACCACCGCTGCCGTCCTCTCTCCGTTCAAGCCCGCTCCGTCTCCACTCTCACTCAAGACGACCTCAAGAAGCTTGCTGCCGACAAGGCTGTTGAGTATGTCAAGAGTGGAATGGTTCTCGGCCTCGGCACTGGCTCCACCGCCGCTTTCGTTGTCGCTAAGATTGGCGAACTTCTCAAGAGTAATCAATTGAGTGACATTGTTGGAATCCCTACCTCCAAGCGGACGGAGGAGCAAGCTAGGGCATTAGGAATTCCTCTCTCTGTTCTTGATGATCATCCGCATCTCGATTTGGCTATCGATGGCGCTGATGAGGTCGATCCAGATCTGAATCTCGTTAAAGGCCGCGGCGGCGCTTTGTTGCGTGAGAAAATGGTTGAGGCTGCTTCCGATAAATTCGTCGTCGTCGTCGATGATACTAAATTAGTTGACGGCCTCGGCGGAAGCGGTCTCGCGATGCCGGTGGAAGTCGTTCAGTTCTGCTGGAAATACAATTTGGTGAGGCTTCAAGACCTATTCAAGGACGAAGATTGCGAGGCCAAGCTCCGATTGGACGCCGATGGGAAGCCATACGTCACCGATAATTCAAATTACATAGTCGATTTATATTTCAAGACTCCAATCAAAGACGGATTAGCCGCCGGAAAAGAGATTTCAGCGTTTGAAGGAGTGGTGGAGCACGGGCTCTTCTTGGACATGGCGACCGCCGTAATCATCGCCGGAAAAGATGGAATCGACATCAAGACCAAATGA

mRNA sequence

ATGGCTTCCCTCTCTCTCATCTCCCCTCCTTCTCTCTCTTCCTCCCGCCATGTTTCCTCCATAGCCAACCTTCTTCTCCGATCACCAAAGCCTCTTAATCTTTCCGCTCATAACCACCACCGCTGCCGTCCTCTCTCCGTTCAAGCCCGCTCCGTCTCCACTCTCACTCAAGACGACCTCAAGAAGCTTGCTGCCGACAAGGCTGTTGAGTATGTCAAGAGTGGAATGGTTCTCGGCCTCGGCACTGGCTCCACCGCCGCTTTCGTTGTCGCTAAGATTGGCGAACTTCTCAAGAGTAATCAATTGAGTGACATTGTTGGAATCCCTACCTCCAAGCGGACGGAGGAGCAAGCTAGGGCATTAGGAATTCCTCTCTCTGTTCTTGATGATCATCCGCATCTCGATTTGGCTATCGATGGCGCTGATGAGGTCGATCCAGATCTGAATCTCGTTAAAGGCCGCGGCGGCGCTTTGTTGCGTGAGAAAATGGTTGAGGCTGCTTCCGATAAATTCGTCGTCGTCGTCGATGATACTAAATTAGTTGACGGCCTCGGCGGAAGCGGTCTCGCGATGCCGGTGGAAGTCGTTCAGTTCTGCTGGAAATACAATTTGGTGAGGCTTCAAGACCTATTCAAGGACGAAGATTGCGAGGCCAAGCTCCGATTGGACGCCGATGGGAAGCCATACGTCACCGATAATTCAAATTACATAGTCGATTTATATTTCAAGACTCCAATCAAAGACGGATTAGCCGCCGGAAAAGAGATTTCAGCGTTTGAAGGAGTGGTGGAGCACGGGCTCTTCTTGGACATGGCGACCGCCGTAATCATCGCCGGAAAAGATGGAATCGACATCAAGACCAAATGA

Coding sequence (CDS)

ATGGCTTCCCTCTCTCTCATCTCCCCTCCTTCTCTCTCTTCCTCCCGCCATGTTTCCTCCATAGCCAACCTTCTTCTCCGATCACCAAAGCCTCTTAATCTTTCCGCTCATAACCACCACCGCTGCCGTCCTCTCTCCGTTCAAGCCCGCTCCGTCTCCACTCTCACTCAAGACGACCTCAAGAAGCTTGCTGCCGACAAGGCTGTTGAGTATGTCAAGAGTGGAATGGTTCTCGGCCTCGGCACTGGCTCCACCGCCGCTTTCGTTGTCGCTAAGATTGGCGAACTTCTCAAGAGTAATCAATTGAGTGACATTGTTGGAATCCCTACCTCCAAGCGGACGGAGGAGCAAGCTAGGGCATTAGGAATTCCTCTCTCTGTTCTTGATGATCATCCGCATCTCGATTTGGCTATCGATGGCGCTGATGAGGTCGATCCAGATCTGAATCTCGTTAAAGGCCGCGGCGGCGCTTTGTTGCGTGAGAAAATGGTTGAGGCTGCTTCCGATAAATTCGTCGTCGTCGTCGATGATACTAAATTAGTTGACGGCCTCGGCGGAAGCGGTCTCGCGATGCCGGTGGAAGTCGTTCAGTTCTGCTGGAAATACAATTTGGTGAGGCTTCAAGACCTATTCAAGGACGAAGATTGCGAGGCCAAGCTCCGATTGGACGCCGATGGGAAGCCATACGTCACCGATAATTCAAATTACATAGTCGATTTATATTTCAAGACTCCAATCAAAGACGGATTAGCCGCCGGAAAAGAGATTTCAGCGTTTGAAGGAGTGGTGGAGCACGGGCTCTTCTTGGACATGGCGACCGCCGTAATCATCGCCGGAAAAGATGGAATCGACATCAAGACCAAATGA

Homology

[Close]

BLAST of CmoCh12G011320 vs. Swiss-Prot
Match: RPI3_ARATH (Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana GN=RPI3 PE=1 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 5.4e-105
Identity = 201/289 (69.55%), Postives = 234/289 (80.97%), Query Frame = 1


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPK-PLNLSAHNHHRCRPLSVQARSVSTLTQDD 60
           MASLS +S             ++L LR+P   L  +  +       SV+A+SV  L+QDD
Sbjct: 1   MASLSFVSS------------SHLTLRTPSIALRSTGSSPRTSVSFSVKAQSV-ALSQDD 60

Query: 61  LKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQAR 120
           LKKLAA+KAVE +K GMVLGLGTGSTAAF V +IG+LL S +L DIVGIPTSKRTEEQAR
Sbjct: 61  LKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQAR 120

Query: 121 ALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTK 180
           +LGIPL  LD HP +DLAIDGADEVDP+L+LVKGRGGALLREKMVEA +DKF+VV DDTK
Sbjct: 121 SLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVADDTK 180

Query: 181 LVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVD 240
           LV GLGGSGLAMPVEVVQFCW +NL+RLQDLFK+  CE+KLR+D DGKPYVTDNSNYI+D
Sbjct: 181 LVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCESKLRVDGDGKPYVTDNSNYIID 240

Query: 241 LYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           LYFKTP+KDG AA KEI  F+GVVEHGLFL MAT+VIIAGK+G+++ TK
Sbjct: 241 LYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNGVEVMTK 276

[Close]

BLAST of CmoCh12G011320 vs. Swiss-Prot
Match: RPI2_ARATH (Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana GN=RPI2 PE=1 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 3.3e-78
Identity = 148/234 (63.25%), Postives = 183/234 (78.21%), Query Frame = 1


Query: 55  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRT 114
           LTQD+LK++AA KAVE+V+SGMVLGLGTGSTA   V +IGELL+  +L +IVGIPTSK+T
Sbjct: 31  LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKT 90

Query: 115 EEQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVV 174
           +EQA +LGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS KFVV+
Sbjct: 91  QEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVI 150

Query: 175 VDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNS 234
           VDD+K+V  +GGS LA+PVE+V FCWK+   +L+ L +   CEA LRL   GK +VTDN 
Sbjct: 151 VDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKAFVTDNG 210

Query: 235 NYIVDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           NYIVD++ +  + D  A    I    GVVEHG+FLDMA+ VIIAG+ G+ IK K
Sbjct: 211 NYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKIKNK 264

[Close]

BLAST of CmoCh12G011320 vs. Swiss-Prot
Match: RPI1_ARATH (Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana GN=RPI1 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.3e-76
Identity = 148/245 (60.41%), Postives = 185/245 (75.51%), Query Frame = 1


Query: 49  ARSVSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGI 108
           A  +S LTQ++LKK+AA KAVE+V+SGMV+GLGTGSTA   VA+I ELL+  +L DI+GI
Sbjct: 21  APPLSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGI 80

Query: 109 PTSKRTEEQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS 168
           PTS  T EQA +LGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS
Sbjct: 81  PTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGAS 140

Query: 169 DKFVVVVDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRL-----D 228
            KFVV+VD++KLV  +GGSGLA+PVEVV FC  +   +L++LF+D  C AKLR+      
Sbjct: 141 KKFVVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNG 200

Query: 229 ADGKPYVTDNSNYIVDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGI 288
            +  P VTDN NY+VDLY +  I D   A + I  F GVVEHG+FL MAT +I+AGK G+
Sbjct: 201 EEAAPAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFGV 260

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BLAST of CmoCh12G011320 vs. Swiss-Prot
Match: RPIA_SYNJA (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpiA PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.3e-54
Identity = 115/228 (50.44%), Postives = 159/228 (69.74%), Query Frame = 1


Query: 58  DDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQ 117
           D+LK+ AA  A + V+SGMV+GLGTGSTAAF V  + + ++   L   +G+PTS+RT EQ
Sbjct: 5   DELKQAAAQAAAQKVQSGMVVGLGTGSTAAFAVGALAQRMQKEGL-QFIGVPTSERTAEQ 64

Query: 118 ARALGIPLSVLDDHPHLDLAIDGADEVD-PDLNLVKGRGGALLREKMVEAASDKFVVVVD 177
           AR+LGIPL+ L++ P LDLAIDGADE++   LNL+KG GGALLREK+VEA++ + +++ D
Sbjct: 65  ARSLGIPLATLEEQPRLDLAIDGADEIEVGSLNLIKGAGGALLREKLVEASAAELIIIAD 124

Query: 178 DTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNY 237
            +K V  L G+   +PVEVV+F WK  L R++ L     C+A LR  A+G PY+TD  +Y
Sbjct: 125 ASKKVAHL-GTRFPVPVEVVRFGWKTTLARVEAL----GCQAVLRRTAEGDPYLTDEQHY 184

Query: 238 IVDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGID 285
           I+D  F  PI +     +++    GVVEHGLF+ MAT  IIAG +GI+
Sbjct: 185 ILDCQF-GPIANPAKLAEQLKGTVGVVEHGLFIGMATEAIIAGPEGIE 225

[Close]

BLAST of CmoCh12G011320 vs. Swiss-Prot
Match: RPIA_DESAA (Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rpiA PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-53
Identity = 118/228 (51.75%), Postives = 154/228 (67.54%), Query Frame = 1


Query: 56  TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTE 115
           +QD LKK AA+KAVEY++SGMV+GLG+GSTA F +  I  L+K  +L DIVGIP+S  TE
Sbjct: 3   SQDALKKQAAEKAVEYLESGMVVGLGSGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTE 62

Query: 116 EQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVV 175
           E AR+LGIPL   ++H  +D+ IDGADEVDPDLNL+KG GGALLREK+V  A+ K +++V
Sbjct: 63  EVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIV 122

Query: 176 DDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSN 235
           D++K+ D L G+  A+PVEVV F        L+ L      +  +R +  GK + TDN N
Sbjct: 123 DESKISDKL-GTIFALPVEVVPFATASETRFLESL----GAKVTVRENQLGKAFKTDNHN 182

Query: 236 YIVDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGI 284
            I+D  F  P+ D +  G  +S   GVVEHGLFL     VI+AG DGI
Sbjct: 183 RILDADF-GPMDDAVKIGMALSQRAGVVEHGLFLGTTALVIVAGADGI 224

[Close]

BLAST of CmoCh12G011320 vs. TrEMBL
Match: A0A0A0LFJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011530 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 2.1e-140
Identity = 267/288 (92.71%), Postives = 274/288 (95.14%), Query Frame = 1


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTLTQDDL 60
           MASLS ISPPS+SSSRHVSSIANLLLRS KPLNLS H     RPLSV AR VSTLTQDDL
Sbjct: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHY----RPLSVHAR-VSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+NQL+DIVGIPTSKRTEEQAR+
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARS 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDL 240
           VDGLGGSGLAMPVEVVQFCWKYNLVRLQ+LFK+E CEAKLRLD D KPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDL 240

Query: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YFKTPIKDGLAAGKEIS+FEGVVEHGLFLDMATAVIIAGKDGIDIK K
Sbjct: 241 YFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 283

[Close]

BLAST of CmoCh12G011320 vs. TrEMBL
Match: W9RQW9_9ROSA (Putative ribose-5-phosphate isomerase OS=Morus notabilis GN=L484_024593 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.5e-122
Identity = 234/293 (79.86%), Postives = 259/293 (88.40%), Query Frame = 1


Query: 2   ASLSLISPPSLSSSRH------VSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTL 61
           +SLSL+SPPSLSS+ H       S    L+LR+P+PLN+      R    + +A+SV  L
Sbjct: 3   SSLSLLSPPSLSSTHHHYNASSSSFTTRLILRTPRPLNV------RTPTSTTRAQSVPAL 62

Query: 62  TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTE 121
           TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAK+G+LL + QLSDIVGIPTSKRTE
Sbjct: 63  TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKLGQLLSTGQLSDIVGIPTSKRTE 122

Query: 122 EQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVV 181
           EQAR+LGIPLSVLDDHP LDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVV 
Sbjct: 123 EQARSLGIPLSVLDDHPCLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVA 182

Query: 182 DDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSN 241
           D+TKLV+GLGGSGLAMPVEVVQFCWKYNLVRLQ+LFK+E  +AKLRLD+DGKPYVTDNSN
Sbjct: 183 DETKLVEGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGVDAKLRLDSDGKPYVTDNSN 242

Query: 242 YIVDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YIVDLYFKTPIKD +AAGKEISA EGVVEHGLFLDMATAVIIAG +G+D++TK
Sbjct: 243 YIVDLYFKTPIKDAIAAGKEISALEGVVEHGLFLDMATAVIIAGTNGVDVQTK 289

[Close]

BLAST of CmoCh12G011320 vs. TrEMBL
Match: F6HTS6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01900 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 5.4e-120
Identity = 234/292 (80.14%), Postives = 257/292 (88.01%), Query Frame = 1


Query: 1   MASLSLISPP---SLSSSRHVSSIANLLLRSPKPLNLSAHNHHRCRPL-SVQARSVSTLT 60
           MA+LSL+SPP   SLSS  H ++++   LR+   L        R RPL S++A S   LT
Sbjct: 1   MATLSLLSPPKSHSLSSLHHRNALS---LRTSSTLT------PRTRPLLSIRAFSAPALT 60

Query: 61  QDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEE 120
           QDDLKKLAADKAV+YVKSGMVLGLGTGSTAAFVVAK+G LLK+ QLSDIVG+PTSKRTEE
Sbjct: 61  QDDLKKLAADKAVDYVKSGMVLGLGTGSTAAFVVAKLGHLLKTGQLSDIVGVPTSKRTEE 120

Query: 121 QARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVD 180
           QA +LGIPLSVLD HP +DLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVD
Sbjct: 121 QALSLGIPLSVLDHHPSIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVD 180

Query: 181 DTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNY 240
           DTKLV+GLGGSGLAMPVEVVQFCWKYNLVRLQ+LFK+E CEAKLRL+ DGKPYVTDNSNY
Sbjct: 181 DTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLNPDGKPYVTDNSNY 240

Query: 241 IVDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           IVDLYFKTPIKD +AAGKEIS+FEGVVEHGLFLDMATAVIIAGKDG+ +KTK
Sbjct: 241 IVDLYFKTPIKDSIAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGVTVKTK 283

[Close]

BLAST of CmoCh12G011320 vs. TrEMBL
Match: M5VZJ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009739mg PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 7.0e-120
Identity = 226/287 (78.75%), Postives = 255/287 (88.85%), Query Frame = 1


Query: 2   ASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTLTQDDLK 61
           +SLSL+SP       H +S  +LLLR+PK  NL + ++   RP+S++AR+V  LTQD+LK
Sbjct: 3   SSLSLLSP-------HNASTTHLLLRTPKTPNLRSSSY---RPMSIKARTVPALTQDELK 62

Query: 62  KLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARAL 121
           KLAADKAVEYVKSGMVLGLGTGSTAAFVV+K+GELLKS +L +IVG+PTSKRTE+QAR L
Sbjct: 63  KLAADKAVEYVKSGMVLGLGTGSTAAFVVSKLGELLKSGELQNIVGVPTSKRTEDQARQL 122

Query: 122 GIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLV 181
           GIPLSVLDDHP +DLAIDGADEVDP+L+LVKGRGGALLREKMVEAASDKFVVV D+TKLV
Sbjct: 123 GIPLSVLDDHPKIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAASDKFVVVADETKLV 182

Query: 182 DGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDLY 241
            GLGGSGLAMPVEVVQFCWKYNLVRLQ+LF +E  EAKLRLD DGKPY+TDN NYIVDLY
Sbjct: 183 TGLGGSGLAMPVEVVQFCWKYNLVRLQELFNEEGVEAKLRLDGDGKPYITDNFNYIVDLY 242

Query: 242 FKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           FK+PIKDG AAGKEIS FEGVVEHGLFLDMATAVIIAGKDG+D+KTK
Sbjct: 243 FKSPIKDGPAAGKEISKFEGVVEHGLFLDMATAVIIAGKDGVDVKTK 279

[Close]

BLAST of CmoCh12G011320 vs. TrEMBL
Match: V5N8M2_PHAVU (Putative ribose-5-phosphate isomerase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 5.9e-119
Identity = 230/288 (79.86%), Postives = 250/288 (86.81%), Query Frame = 1


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTLTQDDL 60
           MASLSL SPPSLSS+ H +S   L+LR+P  L L      R  P S+ A    TLTQDDL
Sbjct: 1   MASLSLSSPPSLSSAHHNAS-TRLILRTPNSLKL------RTPPHSLPAIRAITLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARA 120
           K+LAADKAVE VKSGMVLGLGTGSTAAFVVAK+G LL S QLSDI+G+PTSKRTEEQAR+
Sbjct: 61  KRLAADKAVESVKSGMVLGLGTGSTAAFVVAKLGALLASGQLSDIIGVPTSKRTEEQARS 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDD+P LDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKF+VVVDDTKL
Sbjct: 121 LGIPLSVLDDNPRLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFIVVVDDTKL 180

Query: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDL 240
           VDGLGGSGLAMPVEVVQFCWKYNL RLQ LFK+E C+AKLRLD  GKPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKYNLDRLQQLFKEEGCDAKLRLDESGKPYVTDNSNYIVDL 240

Query: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YFKTPI+D LAAG EISA EGVVEHGLFL+MAT+VIIAGK G+++K K
Sbjct: 241 YFKTPIRDSLAAGAEISALEGVVEHGLFLNMATSVIIAGKSGVEVKNK 281

[Close]

BLAST of CmoCh12G011320 vs. TAIR10
Match: AT3G04790.1 (AT3G04790.1 Ribose 5-phosphate isomerase, type A protein)

HSP 1 Score: 382.1 bits (980), Expect = 3.0e-106
Identity = 201/289 (69.55%), Postives = 234/289 (80.97%), Query Frame = 1


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPK-PLNLSAHNHHRCRPLSVQARSVSTLTQDD 60
           MASLS +S             ++L LR+P   L  +  +       SV+A+SV  L+QDD
Sbjct: 1   MASLSFVSS------------SHLTLRTPSIALRSTGSSPRTSVSFSVKAQSV-ALSQDD 60

Query: 61  LKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQAR 120
           LKKLAA+KAVE +K GMVLGLGTGSTAAF V +IG+LL S +L DIVGIPTSKRTEEQAR
Sbjct: 61  LKKLAAEKAVEAIKPGMVLGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQAR 120

Query: 121 ALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTK 180
           +LGIPL  LD HP +DLAIDGADEVDP+L+LVKGRGGALLREKMVEA +DKF+VV DDTK
Sbjct: 121 SLGIPLVGLDTHPRIDLAIDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVADDTK 180

Query: 181 LVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVD 240
           LV GLGGSGLAMPVEVVQFCW +NL+RLQDLFK+  CE+KLR+D DGKPYVTDNSNYI+D
Sbjct: 181 LVTGLGGSGLAMPVEVVQFCWNFNLIRLQDLFKEFGCESKLRVDGDGKPYVTDNSNYIID 240

Query: 241 LYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           LYFKTP+KDG AA KEI  F+GVVEHGLFL MAT+VIIAGK+G+++ TK
Sbjct: 241 LYFKTPLKDGFAAAKEIGKFQGVVEHGLFLGMATSVIIAGKNGVEVMTK 276

[Close]

BLAST of CmoCh12G011320 vs. TAIR10
Match: AT2G01290.1 (AT2G01290.1 ribose-5-phosphate isomerase 2)

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-79
Identity = 148/234 (63.25%), Postives = 183/234 (78.21%), Query Frame = 1


Query: 55  LTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRT 114
           LTQD+LK++AA KAVE+V+SGMVLGLGTGSTA   V +IGELL+  +L +IVGIPTSK+T
Sbjct: 31  LTQDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKT 90

Query: 115 EEQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVV 174
           +EQA +LGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS KFVV+
Sbjct: 91  QEQALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVI 150

Query: 175 VDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNS 234
           VDD+K+V  +GGS LA+PVE+V FCWK+   +L+ L +   CEA LRL   GK +VTDN 
Sbjct: 151 VDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKAFVTDNG 210

Query: 235 NYIVDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           NYIVD++ +  + D  A    I    GVVEHG+FLDMA+ VIIAG+ G+ IK K
Sbjct: 211 NYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKIKNK 264

[Close]

BLAST of CmoCh12G011320 vs. TAIR10
Match: AT1G71100.1 (AT1G71100.1 Ribose 5-phosphate isomerase, type A protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-77
Identity = 148/245 (60.41%), Postives = 185/245 (75.51%), Query Frame = 1


Query: 49  ARSVSTLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGI 108
           A  +S LTQ++LKK+AA KAVE+V+SGMV+GLGTGSTA   VA+I ELL+  +L DI+GI
Sbjct: 21  APPLSNLTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDIIGI 80

Query: 109 PTSKRTEEQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAAS 168
           PTS  T EQA +LGIPLS LD HP +DL+IDGADEVDP LNLVKGRGG+LLREKM+E AS
Sbjct: 81  PTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEGAS 140

Query: 169 DKFVVVVDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRL-----D 228
            KFVV+VD++KLV  +GGSGLA+PVEVV FC  +   +L++LF+D  C AKLR+      
Sbjct: 141 KKFVVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGSNG 200

Query: 229 ADGKPYVTDNSNYIVDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGI 288
            +  P VTDN NY+VDLY +  I D   A + I  F GVVEHG+FL MAT +I+AGK G+
Sbjct: 201 EEAAPAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKFGV 260

[Close]

BLAST of CmoCh12G011320 vs. TAIR10
Match: AT5G44520.1 (AT5G44520.1 NagB/RpiA/CoA transferase-like superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-23
Identity = 69/221 (31.22%), Postives = 113/221 (51.13%), Query Frame = 1


Query: 71  YVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARALGIPLSVLDD 130
           YVKSGM++GLG+G  + F +  +G+ L S  L ++VG+P S R+  +A   GIPL    D
Sbjct: 51  YVKSGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAAKYGIPLEYYRD 110

Query: 131 HPHLDLAIDGADEVDPD-LNLVKGRGGA------LLREKMVEAASDKFVVVVDDTKLVDG 190
              +D A   AD V+ + L  V GR  +      +L++K +   +D+ V ++ + +   G
Sbjct: 111 GVQIDFAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAVFMIKEEQYKAG 170

Query: 191 LGGSGLAMPVEVVQFCWKYNLVRLQDLF-KDEDCEAKLRLDADGK-----PYVTDNSNYI 250
           L GS   +PV V    W      + DL+  D +   +  ++ +G      P VT + + I
Sbjct: 171 LEGS---IPVLVQSLNWLAIAEEIDDLYLGDAEVWRRASVENEGPLGGDFPIVTSDGHNI 230

Query: 251 VDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIA 279
           +D+ F TPI+        +   +GVV+HGL +     V+IA
Sbjct: 231 LDVIFTTPIRSLADLATSLDKIDGVVDHGLIIKTRCTVVIA 268

[Close]

BLAST of CmoCh12G011320 vs. NCBI nr
Match: gi|659070609|ref|XP_008455835.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 514.6 bits (1324), Expect = 1.1e-142
Identity = 270/288 (93.75%), Postives = 276/288 (95.83%), Query Frame = 1


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTLTQDDL 60
           MASLS ISPPSLSSSRHVSSIANLLLRS KPLNLS H    CRPLSV AR VSTLTQDDL
Sbjct: 1   MASLSFISPPSLSSSRHVSSIANLLLRSSKPLNLSTH----CRPLSVHAR-VSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+NQL+DIVGIPTSKRTEEQAR+
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARS 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDL 240
           VDGLGGSGLAMPVEVVQFCWKYNLVRLQ+LFK+E CEAKLRL+ DGKPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLEGDGKPYVTDNSNYIVDL 240

Query: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIK K
Sbjct: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 283

[Close]

BLAST of CmoCh12G011320 vs. NCBI nr
Match: gi|449442917|ref|XP_004139227.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 506.5 bits (1303), Expect = 3.0e-140
Identity = 267/288 (92.71%), Postives = 274/288 (95.14%), Query Frame = 1


Query: 1   MASLSLISPPSLSSSRHVSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTLTQDDL 60
           MASLS ISPPS+SSSRHVSSIANLLLRS KPLNLS H     RPLSV AR VSTLTQDDL
Sbjct: 1   MASLSFISPPSISSSRHVSSIANLLLRSSKPLNLSTHY----RPLSVHAR-VSTLTQDDL 60

Query: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARA 120
           KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLK+NQL+DIVGIPTSKRTEEQAR+
Sbjct: 61  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKRTEEQARS 120

Query: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 121 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 180

Query: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDL 240
           VDGLGGSGLAMPVEVVQFCWKYNLVRLQ+LFK+E CEAKLRLD D KPYVTDNSNYIVDL
Sbjct: 181 VDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDNSNYIVDL 240

Query: 241 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YFKTPIKDGLAAGKEIS+FEGVVEHGLFLDMATAVIIAGKDGIDIK K
Sbjct: 241 YFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 283

[Close]

BLAST of CmoCh12G011320 vs. NCBI nr
Match: gi|1009117613|ref|XP_015875411.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 458.4 bits (1178), Expect = 9.4e-126
Identity = 239/288 (82.99%), Postives = 260/288 (90.28%), Query Frame = 1


Query: 2   ASLSLISPPSLSSSRH-VSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTLTQDDL 61
           +SLSL+SPPSLSS+ H VSS A L++R+  PLNL  H+    RP+S+ A S   LTQDDL
Sbjct: 3   SSLSLLSPPSLSSNLHNVSSTARLIMRTTMPLNLRTHSR---RPMSITAHSAPALTQDDL 62

Query: 62  KKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEEQARA 121
           KKLAADKAV+YVKSGMVLGLGTGSTAAFVVAK+GELL S QL+DIVG+PTSKRTEEQAR 
Sbjct: 63  KKLAADKAVDYVKSGMVLGLGTGSTAAFVVAKLGELLSSGQLTDIVGVPTSKRTEEQARQ 122

Query: 122 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 181
           LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL
Sbjct: 123 LGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVDDTKL 182

Query: 182 VDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNYIVDL 241
           V GLGGSGLAMPVEVVQFCWKYNLVRLQ+LFK+E  EAKLRL+  GKPYVTDNSNYIVDL
Sbjct: 183 VSGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGVEAKLRLNG-GKPYVTDNSNYIVDL 242

Query: 242 YFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YFKTPIKDGL AGKEISA EGVVEHGLFLDMAT+VIIAGK+G+D++ K
Sbjct: 243 YFKTPIKDGLGAGKEISALEGVVEHGLFLDMATSVIIAGKNGVDVQNK 286

[Close]

BLAST of CmoCh12G011320 vs. NCBI nr
Match: gi|703121349|ref|XP_010102306.1| (putative ribose-5-phosphate isomerase [Morus notabilis])

HSP 1 Score: 447.2 bits (1149), Expect = 2.2e-122
Identity = 234/293 (79.86%), Postives = 259/293 (88.40%), Query Frame = 1


Query: 2   ASLSLISPPSLSSSRH------VSSIANLLLRSPKPLNLSAHNHHRCRPLSVQARSVSTL 61
           +SLSL+SPPSLSS+ H       S    L+LR+P+PLN+      R    + +A+SV  L
Sbjct: 3   SSLSLLSPPSLSSTHHHYNASSSSFTTRLILRTPRPLNV------RTPTSTTRAQSVPAL 62

Query: 62  TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTE 121
           TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAK+G+LL + QLSDIVGIPTSKRTE
Sbjct: 63  TQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKLGQLLSTGQLSDIVGIPTSKRTE 122

Query: 122 EQARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVV 181
           EQAR+LGIPLSVLDDHP LDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVV 
Sbjct: 123 EQARSLGIPLSVLDDHPCLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVA 182

Query: 182 DDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSN 241
           D+TKLV+GLGGSGLAMPVEVVQFCWKYNLVRLQ+LFK+E  +AKLRLD+DGKPYVTDNSN
Sbjct: 183 DETKLVEGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGVDAKLRLDSDGKPYVTDNSN 242

Query: 242 YIVDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           YIVDLYFKTPIKD +AAGKEISA EGVVEHGLFLDMATAVIIAG +G+D++TK
Sbjct: 243 YIVDLYFKTPIKDAIAAGKEISALEGVVEHGLFLDMATAVIIAGTNGVDVQTK 289

[Close]

BLAST of CmoCh12G011320 vs. NCBI nr
Match: gi|225451299|ref|XP_002278297.1| (PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Vitis vinifera])

HSP 1 Score: 438.7 bits (1127), Expect = 7.7e-120
Identity = 234/292 (80.14%), Postives = 257/292 (88.01%), Query Frame = 1


Query: 1   MASLSLISPP---SLSSSRHVSSIANLLLRSPKPLNLSAHNHHRCRPL-SVQARSVSTLT 60
           MA+LSL+SPP   SLSS  H ++++   LR+   L        R RPL S++A S   LT
Sbjct: 1   MATLSLLSPPKSHSLSSLHHRNALS---LRTSSTLT------PRTRPLLSIRAFSAPALT 60

Query: 61  QDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKSNQLSDIVGIPTSKRTEE 120
           QDDLKKLAADKAV+YVKSGMVLGLGTGSTAAFVVAK+G LLK+ QLSDIVG+PTSKRTEE
Sbjct: 61  QDDLKKLAADKAVDYVKSGMVLGLGTGSTAAFVVAKLGHLLKTGQLSDIVGVPTSKRTEE 120

Query: 121 QARALGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVD 180
           QA +LGIPLSVLD HP +DLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVD
Sbjct: 121 QALSLGIPLSVLDHHPSIDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVVVVD 180

Query: 181 DTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQDLFKDEDCEAKLRLDADGKPYVTDNSNY 240
           DTKLV+GLGGSGLAMPVEVVQFCWKYNLVRLQ+LFK+E CEAKLRL+ DGKPYVTDNSNY
Sbjct: 181 DTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLNPDGKPYVTDNSNY 240

Query: 241 IVDLYFKTPIKDGLAAGKEISAFEGVVEHGLFLDMATAVIIAGKDGIDIKTK 289
           IVDLYFKTPIKD +AAGKEIS+FEGVVEHGLFLDMATAVIIAGKDG+ +KTK
Sbjct: 241 IVDLYFKTPIKDSIAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGVTVKTK 283

The following BLAST results are available for this feature:

BLAST of CmoCh12G011320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RPI3_ARATH	5.4e-105	69.55	Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana G...	[more]
RPI2_ARATH	3.3e-78	63.25	Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana GN=RPI2 PE=1 SV=...	[more]
RPI1_ARATH	2.3e-76	60.41	Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana GN=RPI1 PE=1 SV=...	[more]
RPIA_SYNJA	4.3e-54	50.44	Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpiA PE...	[more]
RPIA_DESAA	1.6e-53	51.75	Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) ...	[more]

BLAST of CmoCh12G011320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFJ4_CUCSA	2.1e-140	92.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011530 PE=3 SV=1	[more]
W9RQW9_9ROSA	1.5e-122	79.86	Putative ribose-5-phosphate isomerase OS=Morus notabilis GN=L484_024593 PE=3 SV=...	[more]
F6HTS6_VITVI	5.4e-120	80.14	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01900 PE=3 SV=...	[more]
M5VZJ1_PRUPE	7.0e-120	78.75	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009739mg PE=3 SV=1	[more]
V5N8M2_PHAVU	5.9e-119	79.86	Putative ribose-5-phosphate isomerase OS=Phaseolus vulgaris PE=2 SV=1	[more]

BLAST of CmoCh12G011320 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04790.1	3.0e-106	69.55	Ribose 5-phosphate isomerase, type A protein	[more]
AT2G01290.1	1.8e-79	63.25	ribose-5-phosphate isomerase 2	[more]
AT1G71100.1	1.3e-77	60.41	Ribose 5-phosphate isomerase, type A protein	[more]
AT5G44520.1	2.5e-23	31.22	NagB/RpiA/CoA transferase-like superfamily protein	[more]

BLAST of CmoCh12G011320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070609\|ref\|XP_008455835.1\|	1.1e-142	93.75	PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis melo]	[more]
gi\|449442917\|ref\|XP_004139227.1\|	3.0e-140	92.71	PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Cucumis sativ...	[more]
gi\|1009117613\|ref\|XP_015875411.1\|	9.4e-126	82.99	PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Ziziphus juju...	[more]
gi\|703121349\|ref\|XP_010102306.1\|	2.2e-122	79.86	putative ribose-5-phosphate isomerase [Morus notabilis]	[more]
gi\|225451299\|ref\|XP_002278297.1\|	7.7e-120	80.14	PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Vitis vinifer...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004788	Ribose5P_isomerase_typA
IPR020672	Ribose5P_isomerase_typA_subgr

Vocabulary: **Biological Process**
Term	Definition
GO:0009052	pentose-phosphate shunt, non-oxidative branch

Vocabulary: **Molecular Function**
Term	Definition
GO:0004751	ribose-5-phosphate isomerase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015976	carbon utilization
biological_process	GO:0019253	reductive pentose-phosphate cycle
biological_process	GO:0006766	vitamin metabolic process
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006569	tryptophan catabolic process
biological_process	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process	GO:0019748	secondary metabolic process
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0009409	response to cold
biological_process	GO:0010200	response to chitin
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0043900	regulation of multi-organism process
biological_process	GO:0009108	coenzyme biosynthetic process
biological_process	GO:0010310	regulation of hydrogen peroxide metabolic process
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0009595	detection of biotic stimulus
biological_process	GO:0006546	glycine catabolic process
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009684	indoleacetic acid biosynthetic process
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0009106	lipoate metabolic process
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0009052	pentose-phosphate shunt, non-oxidative branch
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004751	ribose-5-phosphate isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011320.1	CmoCh12G011320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004788	Ribose 5-phosphate isomerase, type A	PANTHER	PTHR11934	RIBOSE-5-PHOSPHATE ISOMERASE	coord: 8..288 score: 3.6E
IPR004788	Ribose 5-phosphate isomerase, type A	PFAM	PF06026	Rib_5-P_isom_A	coord: 107..282 score: 1.6
IPR004788	Ribose 5-phosphate isomerase, type A	TIGRFAMs	TIGR00021	TIGR00021	coord: 60..283 score: 6.7
IPR020672	Ribose-5-phosphate isomerase, type A, subgroup	HAMAP	MF_00170	Rib_5P_isom_A	coord: 57..286 score: 30
None	No IPR available	GENE3D	G3DSA:3.30.70.260		coord: 198..266 score: 4.3
None	No IPR available	GENE3D	G3DSA:3.40.50.1360		coord: 59..197 score: 1.0
None	No IPR available	PANTHER	PTHR11934:SF0	RIBOSE-5-PHOSPHATE ISOMERASE	coord: 8..288 score: 3.6E
None	No IPR available	unknown	SSF100950	NagB/RpiA/CoA transferase-like	coord: 56..198 score: 3.0E-41coord: 229..239 score: 3.0
None	No IPR available	unknown	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain	coord: 189..269 score: 1.96

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G011320	Cucsa.133370	Cucumber (Gy14) v1	cgycmoB0359
CmoCh12G011320	CmaCh12G011140	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G011320	CmaCh05G011930	Cucurbita maxima (Rimu)	cmacmoB763
CmoCh12G011320	Cla019816	Watermelon (97103) v1	cmowmB156
CmoCh12G011320	Csa2G011530	Cucumber (Chinese Long) v2	cmocuB157
CmoCh12G011320	MELO3C004370	Melon (DHL92) v3.5.1	cmomeB161
CmoCh12G011320	ClCG02G016530	Watermelon (Charleston Gray)	cmowcgB144
CmoCh12G011320	CSPI02G03100	Wild cucumber (PI 183967)	cmocpiB159
CmoCh12G011320	Lsi11G004590	Bottle gourd (USVL1VR-Ls)	cmolsiB148
CmoCh12G011320	MELO3C004370.2	Melon (DHL92) v3.6.1	cmomedB177
CmoCh12G011320	CsaV3_2G004240	Cucumber (Chinese Long) v3	cmocucB0185
CmoCh12G011320	Cla97C02G042310	Watermelon (97103) v2	cmowmbB161
CmoCh12G011320	Bhi06G001510	Wax gourd	cmowgoB0171
CmoCh12G011320	CsGy2G003210	Cucumber (Gy14) v2	cgybcmoB170
CmoCh12G011320	Carg17590	Silver-seed gourd	carcmoB0973
CmoCh12G011320	Carg23443	Silver-seed gourd	carcmoB0404

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh12G011320	CmoCh05G012160	Cucurbita moschata (Rifu)	cmocmoB148

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G011320	Wild cucumber (PI 183967)	cmocpiB190
CmoCh12G011320	Cucumber (Chinese Long) v2	cmocuB187
CmoCh12G011320	Watermelon (Charleston Gray)	cmowcgB126
CmoCh12G011320	Watermelon (97103) v1	cmowmB132
CmoCh12G011320	Cucurbita pepo (Zucchini)	cmocpeB142
CmoCh12G011320	Cucurbita pepo (Zucchini)	cmocpeB147
CmoCh12G011320	Cucurbita pepo (Zucchini)	cmocpeB175
CmoCh12G011320	Bottle gourd (USVL1VR-Ls)	cmolsiB142
CmoCh12G011320	Cucumber (Gy14) v2	cgybcmoB891
CmoCh12G011320	Cucumber (Chinese Long) v3	cmocucB0220
CmoCh12G011320	Watermelon (97103) v2	cmowmbB188
CmoCh12G011320	Cucurbita moschata (Rifu)	cmocmoB086