CsaV3_1G017260 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G017260
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	ER membrane protein complex subunit 3
Location	chr1 : 11794862 .. 11808373 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAAATTTAGACAAAAACAAAACGATAATAAATTATTAATCAAATAACAATCAATATGGATTATAATTAATCCATTTAGTAACTCCTTACATACTCAAACACCCCCTGGTAGAAAGTTAGAAACTATATTTAAGTCTCGGTATTTCCGTTCGTCGAGTTTCAACTCTCCTCTACCGCGACGGACTGATCACAAAACATTTAATCCAGGCCTCCGTAGTTCGACTTTGAGGAGTTCGCCTGTCAGATCCAGTCATGGCGGAGGATCTAGTGCTCGACACGGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTTGTCATGGTCCTCATTGGAGTTCTCCGCTACTTTGTCTCCAAGCTCATGCGCTCCTCTCCAGTCCCCGATGCCAAAGTCGTACGAGAAGGGTAAATTTTGATTCCTAATCTTCATCATTCGTGACCTTTCATCTTGTTTGTTCCTCACCCAGTTTTTAATTCTGGGTTTCAGGCAAATTGTACTTAGGGCACGGAATTTACGTTCAGCTGCTAATTTTATTCCCCATAAGTCGTTTCGTTCCCGCAGAATTTATTACGGCAATGAGGTTCTTTCCACCCTCTTTTTTTCCCAATGTAGTATGCGATGTATTTTATATCAAAAGGAATGCGTTATGTGATGTGAGTCTGTTATGACATACCAAATTCGCTTCATTAAACATTTTTGGGGAGTAATCGTTTTAGAATATATGTCTATGGTACTTCTTTAATGGCATAAGGTGTAGAAGGTTTAGTTTCTCTCTCGGGATTCAGTTTTGGGTATCAAGTGCAGTCAGAACTCTTATGGGAGCTCTTTATTATTTCTGTTAGTTTTCTAAACTCAGTTTAGTCAAGTTGTTCATCTGTTAGTCATTTTTGTTTGTGATTGATTTATTGAAAATTTGTTACTGCTTCTCCTCTTCAAAGCTTGTAAGTTCTCTGTTGATATCTGAGACTTGATTCAATAATTCAATTTTCATTTCATGGTATCAGAGTAAGCTTTATACAGTTTATGAGATAGGAAACTTATTTACTCTACCATGGGAAAACAAGCACTAAGTTACTAAAGCAGCATTCAGGGTTCGTCATGTAGAGTATTTATGCACTTTCCATAAGGTTTTATAGGTTGTAACGTGTATGATTTATTTCATCCCTGACCATGGTGACATGTGGATGTCGTGTATTGTTTACCAATTTTGGGAATCCATGTCTGAGAATGGTTGCAATTAGATTGTATCTTTTATTTTAGAATGGTTTTGATGTAACTATGATGTTCTAAGTAGCACAGGAGGACAAAGAAACAATCTAATAACCTAGATATTCATATTCCACGTATGCAATTGGCAGGAAAATGGGCTGCTATATGTTCCCAAAGGCCAGGCCCAAAATGCACAAGCACAGATGTTTTCAGATCCAAATATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGGTGACTATAGTTGCATGTTTGATGACTATTTTTCATTGATATCACCAGGAGTTCAATTATTTACATTTTTATTAATCCTTTTATGCTAGACTCTTACTTTTGCGTGGGTCAACTTTTTCTTCTCCGGATTTGTAGCAGGTGTGTTTTTCATACTACTGATGCTTTTAAATGCCTAAGGATGACCTTTCTGGTTGAGTGAATCTCCAAGTTATCTAGGTTTATAATTTCTATACTTTTTAGGCGTTAAATGGTATGACTATGTGCTGACACTCATTACGATTTTTAATACATGGGAAACTTTATAAAATTATTTACTATGTCTCTGCTGTTTCTCTCTCGGTCATTTTCTTTCATTTTTTGATAATCCTGTTGGGTATAACTGGTAGAAAAAGTTAACCTCAGGTATATTAACCTTGTGCATTTAAAGCTGTTTTTCTACCTGTTCAAGCATCTCCTTTTTTCTAAAACCCCCATTTTGTTTGCATCTAATGGTGTATTCTCTCCTTATCCTAGCAAAAATACCCTTTCCTCTGACTCAGAGGTTCCGGTCGATGTTACAGAATGGAATCGACTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGTTCATGGTATTTTCCAAGATCAGTATTTAAAATTCTGGTGCATGAGTTAATGCCTTCTGAAGTTTTTTTCTGTGTGGTGGGGGGGGGGGGGGGTGGGGGGGGGGGAGTTTTGGTTGGATGATTATCGCTAATAGTTTTGGATTACATGTGCCAGGTACTTTCTAAATTTGTTTGGATTAAGAGGTTTATTCAGTCTCATTCTGGGCGAAGAAAATGGTTAGTCTTTCTGTACAACGATTGCATTTATTTTAACTGTTTAATGTATATATGGAATCTTTTTCACAATAAGCAGCATTTTGAAAGTTCCAGCTCTTATACTGTGAATTATGAGAAAGTAATTCTTGGTGCAGCAATGGATGATACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCAACAAAGGTAAATATTGTTAGTCTTTACTGCATTGTATTTTGAACTTCTATCTTAATTTGCAGGTTGTCAAATAAGGCTGTTTAGAGTTTTATATTCATTATTTTTAACTCTCTCTCTCTCTATCTTCAAATGAAATTATGCCTAGATTAATACGTGGAAGTTTGTATTAGGAGTTCAAATCAATTTACATGGTTGAAAAGTTTTGATCTTATGCACATATATATACAGACATATATATGTATGTATGTATACATGGATTAGATTGGACACATCGTTTTTTGTTTAATATCTTCTAAGAAACATGGCTGGCTGGATTTCATTTTGTTTTTTATTCTTCTGCCTGAGAAATAAACTAAATTTGTGAAGGAAGTCACACATATTTTAGTGGTTAAGTTTCAAACTTTTGCTCTTAGTACCTATTGTAAAAGGATAGACTTTATTGAGTCTGTATGTTACTTATAAGTGTTGATGGATGTGTGTTGTATCATTCAAAATGAGTATTGACTGTTTGCTTACGCCTGATACCTAGCACTGGTTCTGGATTCTATGTTCTCGATTGTCTGCATTGATTTTTGATGATCTTCTTTTGGTCGAATTTGCAACTTCAGTAATAACTGATAACATAAATTGAATAGCATTTTTGAGTCTGCTCAATTTTGCACTAGCTCACTAGGAGTAGATTGTTGTCATAAATGAGGTTCAGGTTCTCTCTGACCTTGGGATGTGCGTTAGCTTCAGTTTGAAGATCAGAAATGGAGCTTTTAGTTTTTTCACTGATTGTAATTCTTTTGTACCTATGGTTGTGATTGTGAATTAAAACCGTAGAAGCTCTTTGTGAGAGTACTAAGGGGTATTTGTAAGACCCCTAGTTAGGGAATAGTACCTTTATTAGGAGAATAATTGTATGGTTTTGAGGGCCTATTAATAATTGGTTAGTAGGTTGGTTAGGTTAGTTTCCTATGAACAGTAGGAGAGGGTCTGGTGAAAGGTATGAAGAATTTTATCAAGGTTTTCCTAATTGGGGAATTTGGAAGAGGATTCCCAACCCTCTTGAATATGCTGAGGTATATTGTAATTTCTTCTTGTTGTAGCAATATATATCTATATTTTAGTGTTCTTTGTGTTCTTGAGTCTCTTGTTAGGTGGTATCCCAACGATTGGTATTAGAGTTGTTCTTTCCTGGGACTCTGGATTTAGATCAAATAGGTGTTGGGTAAAGAAGATGTTAGTATTTCTGGAATCAATGTAACAATCAATTAAGGATTATCGACAAGGATGTGTAGAAAGAGAGAGGGAAAGAGAAGTGAGGAGAGTAGAAAGAAAGAGGCGAGGAGGAATAAGAGAAAAGAAGAGGAATAAGAGAAACATGAATTGACTCCACAATTTTTGAAAAGCCACCATGAAAGAAGGCATGGTGTATGTTCTAGCAAGCTCTATTCAGAGAAAATCAACATTGAAGGAAGAAGAGAGAGAAGGCGAAGCTGAAAGAACTTCTGGGAATGGCAAAGAGGTACAACCAATGGAAATAAAAGGAGAAAAAGAGGCAAGGAGGGGTACCACGGCAGAGAGGAAAAAGAGAAGAACAATGGTGTGAAGATGGAGGAATCGAAGGAGAACGGTCATGAAGGAGATGGAATGTCAAAGAAAAGTAGGATTTGTTGGGTTTCTATTTAGTATTTTCCATTTTTGCATTTTTCCTTTATTAGTATTTTAGTCTCTATTTATTCACCAATGTAATAGCTTATTATGTACTTTTGATTTATTCAATACATTACATAAAATTATCATGGTATCAGAGCTCTGGGTTGTCTTCTTGAGCCCTAGCCTAGCCACCAAAGTTCCTTTCGTTCTCTGTCTCCGTCGATCAACATAGATGGAGGCAAATCCATCGCCGTTAGGATTTTCTTTTTTTAATTTAGTCATTCTCCCACTACAACACTTCCCTAATCAAACCCGCGCATCAAAGACTACTCGTCGATATCCCCTGTGGCCAATACATATAGATTCACGTTCACCGTCGCTCCTTGGCCTGTCAACCATTCTTCTGTCGTTTGTTTTCTCCTTGCCCAGATCTGGATTGTCCGTAGCTCGAGCCTCTGTAGGGTTTAGGGTTTAGGGTTTAGCCAGATCCTCTGTTGCCTCCCTTCATCATAATTCATAGCCTACGTTCGACCCAGATACGTCGCCATTCAAACTTTTCTTGTTTGCTTGTGACTCTTTGGTCGTGGGTCTCAGTTTTATTGTGATATAAGAAAGAGTTTTGACGTGAGATGAGGAATTCTACCATTTGGTTTAAACCAGTTCAATCGGAATGATTTAATTGGTCAAGTTTGGTTTAGCTGGTTTGGCCTGATTTTGTATTTTTTCAAATAAGTCATTCATGGGTTTGTTTTAGATCATGGGGATCTTTGTTTTCGGCCCAGAAGTTCTTGTTTTGTTCTTCATGGGTTTTACTATAGATCTCTATACAAGGATCTATGTTTCTATCCTAGAAGTTCTTGGTTACATTCTTTGTGGGTTTGTGTTTCTAGCCTAGAAGTTCTTGGTTACATTCTTTGTGGGTTTGTGTTTCTAGCCTAGAAGTTCTTGTTTTCATTCTTCGTGAGTATGTGGTTATATCCTAGATATGCTGATTTCATTCAGACTTTTTCTTCACAATCTTAAGTCGTTCGCCATTCTACCACCTCTAGTTTGAGGGAGGGTGTTATAGGAAATTAGATTTTATCGGGTTTTTTCCTATTTAATATTTTCCATATTTGTATTTTTCCTTTATTAGTATTTTGATCTCTATTTATTCACTAATGTTATAGGTTATTATGTCCTTTTGATTTATTTAATATATTATATAAAATTATTGAAGAGAAGAAGTGATTCTTAATTGTTCGGGTCCATCCTCAATGACCAAGAGAGAAATGGTCGGTGATGGGGACTTGGTGGTAGTGGAAAAGCCAATCAGTGAAGGTAGGAGCATCAAAGAGAAGGGGGCAAACTGATGGAACTCGTAGCAAACAAAACTCAGAATTCGATCTTGTTGATTGAAATAACAGAAAATTAACAATTCTCTGTTTCCCTCTCTTTCAAGGAATAACAGAAAGATTCAAATACTAGCAAAATAATCCATACCCCCTCCCGCCATTTAAATCCTCCTATCTTCAATAACTGCGTCAACGGAGCTGCAATTGTCCAATAATTCTGGACAAACCTGCGATAATACCCTGTCAGACCAAGGAACCCCCTTACTTCCCTTACGTTAACAGGAACGGGCCACTCCCTTATTGCTCTGATCTTTTCAGGATCCACCTCAACTCCATCCCCGAAATAATATGTCCTAAGTAGTCCACCCGAGACTGAGCAATGTTACATTTCTTCCTGTTTGCATAGAGTTCATTCCTCCTCAATACCTCTAATATTGCTCTCAAATGACTCAAATGATCTTTCAACCCCTTGCTGTAGATCAAAATATCATCAAAGAATACTAAGACGAACTTTCTTAGGTAGGGCTTGAATATAGTATTCATCAATGATTGAAAAGTGGATGGTGCATTAGTCAACCCGAACGGCATTACCAAAAACTCATAATGACCCTCATTAGTTCTGAATGCTGTCTTTTCAATGTCATCAGTACTCATCCTAATTTGATGATACCCTGATTTCAGATCAATCTTCGTAAAAACTGTGGCTCCATTCAACTCATCAAACAACTCCTCAATCATTGGGATTGGGAACTTGTCTGGTACGGTTACATTATTCAGGGCTCTGTAATCTACACAAAAACGCCAGCTTCCATCTTTCTTTCTTACCAACAATACTGGACTGGAATAAGGGCTTGTGCTCGACCGTATTACTCCCGATGCTAGCATTTCTTCCACCAGTCTCTCCATTTCTGTCTTCTGTTGATATGCATACCTATAGGGTCGTACATTCACTGGATCAGTTCCCTTCTTTAGATGAATCTGGTGTTCTATTACTCTTCGTGGTGGCAAAGTTTCGGGCTACTCAAAGACATCTGCGAAGCTTTTCAACACTACTGCTACTGACTCCTCTACAGTCAAGACTTCATCAAACAAATCATCCCCTTCTAAGGATTTCCTTCTTTCTAAAGCTCTGCATTCGACCAAAAACCCTTGATCCTTGTCTCCCCAAGATTTCATAAGGTTTTTAAGCTGACTCTTGCCTTTGTTAGACTGGGGTCTCCCCTTATAACAATCTTCTCTCCGTGGTGAGTAAAAGTCAGAATCAAGTTTTTCCAGTCTACTTCAGTTATACCAAGAGAGTATAACCATTGCATCCCCAAAATTGCATCCACGCTTCCTAGTTCCAGCGGCAAGAAATCATCAATAACTCTCCATTCTCCAATTATCATTTCAATGGCTTCACAAACTCCCTTCCCTTTTATAGCCGTTCCCAAGCCTAATATGACTCCATAATTTGTAGTACTTTTCGTGCTTATCTGCAGTTCCTCAACCAAGCTTCCAGAAATGAAGCTATGTGTAGCTCCGCAATCTACTAATACAATGATCTCCTTTCCTAGTAATTTTCCCTTCACCTTCATAGTTCCTGGATTAGATAATCCCACTACTGAGTTTATCGATAACTCCACCACAGTCTGCTCTTCTTGGATAACTTCAGCCACATTTAACTCTTTCTGTTCTGCCTTCTCTTCTTCAATGATTTCATATTCCTTATTATCCCCCATCACTACCAGCATACGTAACTCTCTCTGCTCCTTCATCTTACACTTGTGGTCATGAGAATATTTCTCATTGCAACGAAAACAGAGTCCCTTCTCTTTTCGTGATTGAAATTCGGCATCAGATAGTCTTTTCGTTGGGCCTGTTTTCCGTACCTCTTCGCCAGCCGTTCCTCTCAATGTGACGGTCCTCATCGGCCAGTTCCAATTTCCCTTACTTTCTTCAGAATTCCCAACTGTGCTGGTTTTGCTTCCGCTTCCAGAATTACTCAGTTTCGTCCCCGAATAACCAGAGAGGTTTGCTTCTCGTCTAATATCCTCTCTATTTTCTACTTTCTGCGCGATTCTCATCATTTGTGATAATCCTTGAGGCTCACAGAAATCCATCTCGGCCTGTATCCAAGGCTTCAATCCCGACATGAACGTCTCTTCCACCACTTTATCAGCCAGATCCGACAGAGGTGCTACTAATTTATCAAACAGATTTCGGTATTCTTCCACTGTAGTCGTCTGTTGAATGCGCAAGAATCGACCGTATAAAGATCCTTCCCTTGTTGATCGAAATCGGATCAGCACTCTTTCTTTTAAATTTGCCCAATCAGCGAATTAATCCCGCTCTTCTTGAGACCGATACCAGTTCAGCGCGGGTCCTTCGAAGCTAATTGTTGCCACGGTCATCTTTTCGAAATCAGTTAGCTTATGAATTTGAAAATACCTTTCGACGCGAAACAACCATGAATCTGGATTGTCTCCATTGAAGATCGGCATCTCCACCTTCTTGAATTTGTTGCGGTCGCCGTTAGCATCTTCACTCGTTTTTATTTCTTCCTTCTTCGGTTCGTTTTCGCGAATGGAAGTTCCTTCGCCGTCATCGTTGTTCTTCATCGGAGTACCCCGTATTGATAACTCGGTAATCCTTTCGTTCATCGTGGATCTCTCCTGGGCGGCCGACTCCATGAATCGTAACATCATTTGGTTATGTTTTTCCATGTTTTTCGATATTTCGGTCAACGTTTTTTCGATAATTGGTATTTTACTCATCTCCTTCTTGATGCTTTGAATTTCCTGGTCATACGACTCCATCTTCTCTTCCAACCGAGTTTGCACCATCTTCGGTTACTTCTTCCAAGATCACGCTCTGATACCAATTTGATGGAACTCGTAGCAAGCAAAACTCAGAATTCGATCTTGTTGATTGAAATAACAGAAAATTAACAATTCTCTGTTTCCCTCTCTTTCAAGGAATAACAGAAAGATTCAAATACTAGCAAAATAATCCATACCCCCTCCCGCCCTTAACAAACTTATTTATATGGCTAACCAACCTATCACTCACACGTGTCTCCCTCCTTAACAAACTTATTTATATGACTAACCAACCTATCACTAACCAACCTATCACTCACACGTGTCTCCCCCCTTAACAAACTTATTTCCTCTCCTCCTGTACTGATATAATATTGGAGGTCTAACACAAACATTATCTCAAGGAAGCGAGATGGCAGTCAGAAGAAGAAGAAACAGAAGAAGACGCACCTACCGCCAAGCACATGGTTAGAAAAGCAAATAAGAAAGTCGGAAGAAAAACATGTTGGCGATCAGCTGTGGGGGAACAAAGAAACTTTTGCTGCACAAGGATGCAAATAACGGTTGGTTTTGATGGAAAGAGAGAAATAGTTCATATTGGCGGATGGGAAGAGGAATGACGTAAAGAAGAGAGTACGCCAACAACCATGTGTTCGAAAAATTGAGGTAGAAGTCGAAAGAAGTCGTGGCGGAGAAATAAATAAGAGGTGTTCACTGGCGGCCAAAGAAAGAAGAAGATTGATATCTAGGGAGACCAATTGCGGAAAGAGGAAGTGGAGACATGTGATAGTGGTGGTTGACTTGAGATACGAACGGGAGTTGTCAGAATGTAGATGGCGACGAAGCCGCAAGTGAAGCCGAAATTCTTCACAAAGATGCGTTGAAATTTGAAGAGGTAGTCGATGTCAAGCAGCCAAGAACAAAGAAGAAAGCTTGGAAAGGAGGGGGGAATTTTCGTGAAGATGAAGGAAAAGGAATTTGCTACCAACATGAAGTGTTAAGAGGTGGGGTTAGGAATTACAAAATGTTAAACGGTAGAAAAGAGAAGACAAGGTTTACATGGAAAACCCTAGAATAGGGAGAAAAAACCACAATATGGAATCTCTTTTATTATTTTCACGCATAATGAAAGTTACAAAAGTGGATAACTTTATAGGCTTTAACAAGCCTTAATACAAATAAAGGAAATAAGCTCAGGGTAAAGTAAAATACTAAAATACTCTTAGGGCTATAAACTATCAACAAAGCCCTTTATATCCAACACTTCCTCTCAAGTGCCCCGTAGATATCTATCAAACCCAATTTGATAACAAATGAGTCAAAACTTGGCTTGAGTAACCCTTTGGTGAGAACATCAACAACTTGTTGATAAGATGGAATATATGGAATATAGATATTGTCATTGCTCAGTTCTCTTTTATAAAGTGTGTCAATTTCCACATGTTTTGTTCTATCATGTTGTACAAGATTATAGACTATGCTCATTGCCGCTTTATTATCACAATAGAGCTTCATAGGTAAAACATTGTCTTGGTGAAGATCAGACAACTTTCTTCAACCAAATGATTCTCAAACTCATAGCTGAGGTATTCAGCTTCAACAATGCTTCTAGCGATAACACTTTGCTTCTTGCTTCTCCAAGTAACTAGGTTACGTAGACTAAAGGTACAATATCCAAAGATAGATTTTCTATCAATAACTAATTCTGCTCGATCAGAGTCGGTATAAGTCTCAATGCATTTCCTGTCAGTTTTCCTAAACATTAGATCTTTACTTGGAGACCTTTTCAAATATCTCAAAATCCAATTCATAGCTTCCATATGTTCTTCGTAGGGTGTCTGCATAAACTAACTAGCGACAGACAACATAGGATATCTGGTTTAGTGTTAAATAAGTCAATAAGCTTTTATGTAAACTAAACTTAAACCCTACATCAAAATTAAAAATTGAAAGTTCGATTTTTTATTTTCTGAATTGGAGCGATGCTTAACCTCAGGTGGATCGTGGCAGCAAGACCACTCTTTGGCACTTACAATACCCGGTCGCCTATTTTAGTCGTATGTAAAGGATTCTACTCGTCACTTGGTGGAAATTGCGTTACAAGTCGTCTGAAAGTTTGAAGTCAATTACTTTAATATTAAAAAAGTAATAAAGAATAAAATTAGAATTTTTGCCTTGTTTTTAGCCCCAATATTGTCGGTTGATGGATCTTTTAAAGATACGCATATCTGAAGTTAAAAGAAAAAAGAAAAGCATATTGCTAAAACACATATCCAAGACGTATCTAGATGAATCTGTATCAAATGCATATTTGATACGGATTACATACCTTCCCTCATGTATTTGTGCTTCATAAATTGTGGGAGATACATAGCCCTCTCGAAAGGCTATTAATATTTTTGGTATTGCAATATCGGCATCTTTGGTGTATTCTCATGTGTTTTGGTATCCCAACACTTGTTGTCTTGGGATCATATTAGTCATGCGGCCTGTGGCATTGTTACTTTCAAATTGTTAATAAGGAAAATAAATCTTAGTTTTGTAGACAGCAGGACCCATGCCTTTAAAGTTTCATTATTAAACTCCTTGTGACATGAATATCATACGTGGCAAGAACTGATCCTATCGGCTTTTAAAAACATTTTCTGGTGCCCTCCTGTTGACCCTTTGGGCGCTTGGTTTTGTGGCAATCTTCAATCAATTGCTTTGTAGTTTGACATGGATTTGATATGTTTGGAACTTTAGAAAAGCAGTTTGTTCTGAAGAAGCCTGGTTTTCTTTAAATTAAGCGTTAGAATACTATAACACAATATACCGGAATATGAGATGACCAATTTCTATTTTGGTCAATTGTTTTCTAGTTTTAAGCGAACTAGTATGTTATGACAAAGCCTGGTTTTCTTCAAGTTAAAATTTTGAATATTTCCAAAATTCAGCAGTGTGGCCAATTCCTAGACTACAATTAGGATGCTAGAATGTGGGACCACCAATTGTATTTTCAGTTGTATACATACTAGCAATTTCAGGTTGGTAGAATATATCATCAAGGAGCCATCTGGCAAAAAGAGAATGGCAGGAGATGCCAAGGGGATGTTTGGCAACCAACATGTAATTGAGTTGGGTGGGTAAAAAATTCACTCACTGATTGGGTGCCCACCAACAAGTGAAGAGGTTTATTACTCTTGTTCGTGTTAATTCACATTTCGCACCTAGTTATTTGTGTGAACTTATATTTCTGACCTCGTTATTTGTGTCAACTCCCCTAATTACTCTCTCCTATAATTACCAACTCAACTCAACTCTCCAAAAATAACTCTTAACTAAACACCCCTTAAATGGAAGATCATGATAAGTTTTGGGGCAGGAGGGGAATCTAATTGAGCTTAAAATGGTATCTTTTTTTAGTACATTTAAAATGGCAAGTTGCTCCTCTGCAAATTGGGGTGAATAAACTTTATAGAGTTGAAGTCAAAACTGAAGATGTAGGCGGTCCTTGGCTTGCCGCGTATTGGATCCTTTGTTTGTGATTGACCCTACATTTGTCTGCTCTGGCTGTAGCCTGTAGGCAGGACAGGCTTTTAGTTATCCTGACTTGGTGCTTTCCCTATTGCTCATTGACCTGGAATTGATACTAGCGGAAAGCACTGGAGTTAAAAACTTGATCAAATGCTTTTCCCCCCTCTTCATACTGTTATTATTTGTTTGATTATTTATTTGCAAACTTGTTGGTACAGTGTTCTCAAAATGCATATTGTAGATTCCTTTTTTTCTCCTCTTACTTTACTTTATATTTAAGGCTAGTTTGTTGCTACATTACCTGCTGTGGGGGGTTAAGCACTTCGGTTTGAGTGCCAAAACAACCTTCAAACTACCAAAAATTAGATGAAATATTGAAAACTCAAGCCAAACATCCCAGGCTGAAGAAACGAACTGGTCAAACCAATTATCTGATTGTTTAATTGGCTTGGTCTTGGAGTTCATTGTTTTGTTGGGCTGGTGTGCTAAAACGACGAAATTTATTGGGTGGCCTTTGTTTCCAAAATAAACCTGGTAGTGCATTAAACAAGAGGAAATGCACGTAGCTTCTAGGCTCGAATCCAAGTCAGTTGATATACCAACTGAGAATAATCCCAGTAAACTGTACTGATTGATAATCATTCAAGTTTGTTTATACATATCATTGTTGGCCATCATTGTTCGTCTGTTTGGCCTATTACTGGCCGACCTTGTCAAACCTGAATGTGATTGAAAATGATATTGTATAGCCTGAAAACCATTATAGCAAACCAAACGGATCCAAACCCAAACCGATGGGAGTTTCAATCGGTTTTAGCAGGCTTTTTCGAGTGATTTGGTTTCTTGCACTCCTAGTTGCCTGTGCCCATCTGAGCTAAGTTTCATGTGAAACCTCATCATACAACTTACCATCCTTGGTAATAACGGAGCTCCATCTGAAACATCTAGATACATCAACTAAATATGATTTTCATTGGGATGTGTGAATTGTCAACAATGTTCTAATTGATTTTTAACTTTAATCAATTCACTTTTGAGGTTTTATATGGATCTGCTAATTCTCTGGGTTTTCAGGAAGCACTTTATTCCTTAAAATCCGAACCTCTTTAATTCCATATGCCAACCTCTTTAGTAGGTCAATCATTTGTACGGGCTAGTGGTCATTTAGACCGTTTTTCAAAGTAAACCTGGACACATCTCGATGATCTTTGTTGTCCTATCTATTACTAATCTCTTTGCAAAGAATTAATATAATTGATTAGTTGTTAAGAAACATAATTAATTGATATCACCTTTATGAACACTTGAATTGATCATAATTCAAAATCTTTATTCTGTACTGCTGATCTTGATGGTGTGCATTTTCCTTGGCAGGGTTTGAGTGCCGAGAAAGACAACTTGGACATAGTGCAACATGAATGGGTTTTGCCCAAGTTTGAGCATCGTGCTGAAGCTGTTTTGAGAAAGATTGTCAGCTGATTAGTTTCTGGTTCACATGTCCTCTACTAGTATATTTTCTATGATTATTACGATCTAGGTACTACTCTTTTTTGGGATTGTTGTGAAACATAGAAATCTGTTTTTATCGAACATGGATTTTGTAACATTAAATTATTTTTAGTCAATTAATAGCAATTTGGATCTTTCCAAGTCATGGACAATCAATTTTTATAAAACGATACCGTTAAAATTAGAACGCAATGATGATGTCGAACATCCCTTGGAAGGCA

mRNA sequence

ATGGCGGAGGATCTAGTGCTCGACACGGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTTGTCATGGTCCTCATTGGAGTTCTCCGCTACTTTGTCTCCAAGCTCATGCGCTCCTCTCCAGTCCCCGATGCCAAAGTCGTACGAGAAGGGCAAATTGTACTTAGGGCACGGAATTTACGTTCAGCTGCTAATTTTATTCCCCATAAGTCGTTTCGTTCCCGCAGAATTTATTACGGCAATGAGGAAAATGGGCTGCTATATGTTCCCAAAGGCCAGGCCCAAAATGCACAAGCACAGATGTTTTCAGATCCAAATATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGACTCTTACTTTTGCGTGGGTCAACTTTTTCTTCTCCGGATTTGTAGCAGCAAAAATACCCTTTCCTCTGACTCAGAGGTTCCGGTCGATGTTACAGAATGGAATCGACTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGTTCATGGTACTTTCTAAATTTGTTTGGATTAAGAGGTTTATTCAGTCTCATTCTGGGCGAAGAAAATGCAATGGATGATACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCAACAAAGGGTTTGAGTGCCGAGAAAGACAACTTGGACATAGTGCAACATGAATGGGTTTTGCCCAAGTTTGAGCATCGTGCTGAAGCTGTTTTGAGAAAGATTGTCAGCTGA

Coding sequence (CDS)

ATGGCGGAGGATCTAGTGCTCGACACGGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTTGTCATGGTCCTCATTGGAGTTCTCCGCTACTTTGTCTCCAAGCTCATGCGCTCCTCTCCAGTCCCCGATGCCAAAGTCGTACGAGAAGGGCAAATTGTACTTAGGGCACGGAATTTACGTTCAGCTGCTAATTTTATTCCCCATAAGTCGTTTCGTTCCCGCAGAATTTATTACGGCAATGAGGAAAATGGGCTGCTATATGTTCCCAAAGGCCAGGCCCAAAATGCACAAGCACAGATGTTTTCAGATCCAAATATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGACTCTTACTTTTGCGTGGGTCAACTTTTTCTTCTCCGGATTTGTAGCAGCAAAAATACCCTTTCCTCTGACTCAGAGGTTCCGGTCGATGTTACAGAATGGAATCGACTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGTTCATGGTACTTTCTAAATTTGTTTGGATTAAGAGGTTTATTCAGTCTCATTCTGGGCGAAGAAAATGCAATGGATGATACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCAACAAAGGGTTTGAGTGCCGAGAAAGACAACTTGGACATAGTGCAACATGAATGGGTTTTGCCCAAGTTTGAGCATCGTGCTGAAGCTGTTTTGAGAAAGATTGTCAGCTGA

Protein sequence

MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKIVS

Homology

[Close]

BLAST of CsaV3_1G017260 vs. NCBI nr
Match: XP_004139548.1 (PREDICTED: ER membrane protein complex subunit 3 [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 1.2e-133
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKIVS
Sbjct: 241 LRKIVS 246

[Close]

BLAST of CsaV3_1G017260 vs. NCBI nr
Match: XP_008458952.1 (PREDICTED: ER membrane protein complex subunit 3 [Cucumis melo])

HSP 1 Score: 485.0 bits (1247), Expect = 1.6e-133
Identity = 245/246 (99.59%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIPHKSFRSRR+YYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPHKSFRSRRVYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKIVS
Sbjct: 241 LRKIVS 246

[Close]

BLAST of CsaV3_1G017260 vs. NCBI nr
Match: XP_023001598.1 (ER membrane protein complex subunit 3 [Cucurbita maxima] >XP_023519748.1 ER membrane protein complex subunit 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 480.3 bits (1235), Expect = 3.9e-132
Identity = 243/246 (98.78%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIP KSFRSRR+YYGNEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKIVS
Sbjct: 241 LRKIVS 246

[Close]

BLAST of CsaV3_1G017260 vs. NCBI nr
Match: XP_022927570.1 (ER membrane protein complex subunit 3 [Cucurbita moschata])

HSP 1 Score: 479.9 bits (1234), Expect = 5.0e-132
Identity = 242/246 (98.37%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIP KSFRSRR+YYGNEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPQKSFRSRRVYYGNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKI+S
Sbjct: 241 LRKIIS 246

[Close]

BLAST of CsaV3_1G017260 vs. NCBI nr
Match: XP_022142524.1 (ER membrane protein complex subunit 3 [Momordica charantia])

HSP 1 Score: 476.5 bits (1225), Expect = 5.6e-131
Identity = 241/246 (97.97%), Postives = 243/246 (98.78%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           R+ ANFIP KSFRSRR+YYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RAGANFIPLKSFRSRRVYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRK VS
Sbjct: 241 LRKFVS 246

[Close]

BLAST of CsaV3_1G017260 vs. TAIR10
Match: AT4G12590.1 (Protein of unknown function DUF106, transmembrane)

HSP 1 Score: 429.1 bits (1102), Expect = 1.8e-120
Identity = 211/245 (86.12%), Postives = 229/245 (93.47%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS+P PDAK+V+EGQ+V+RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           +  ANFIP KSFR+RR Y+ NEENGLL+VPKG+AQN QA MFSDPNMAMDMMKKNLSMII
Sbjct: 61  KVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILG+ENA+DDTQRMMQM GFG D +K L AEKD LDI+QHEW LP+FE RAE+V
Sbjct: 181 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAESV 240

Query: 241 LRKIV 246
           LRK+V
Sbjct: 241 LRKLV 245

[Close]

BLAST of CsaV3_1G017260 vs. Swiss-Prot
Match: sp|Q7SXW4|EMC3_DANRE (ER membrane protein complex subunit 3 OS=Danio rerio OX=7955 GN=emc3 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-49
Identity = 103/240 (42.92%), Postives = 156/240 (65.00%), Query Frame = 0


Query: 1   MAE-DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARN 60
           MAE +L+LD+ IR WV++P+  +  L+GV+R++VS L++S      + V + Q+++R+R 
Sbjct: 1   MAEPELLLDSNIRLWVVLPIVFITFLVGVIRHYVSILLQSDKKLTLEQVSDSQVLIRSRV 60

Query: 61  LRSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMI 120
           LR    +IP +SF  R+ Y+ N+E+G  +  K + +       +DP+M  DMMK N++ +
Sbjct: 61  LRENGKYIPKQSFLMRKFYFNNQEDG--FFKKTKRKVVPPSPMTDPSMLTDMMKGNVTNV 120

Query: 121 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 180
           +P  L   W+N+ FSGFV  K+PFPLT RF+ MLQ GI+L ++D S+VSS SWYFLN+FG
Sbjct: 121 LPMILIGGWINWTFSGFVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFG 180

Query: 181 LRGLFSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFE 235
           LR ++SLILG++N  D ++ M  QMSG  M    D  K   AE + L++  H+W L   E
Sbjct: 181 LRSMYSLILGQDNGADQSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWALENVE 238

[Close]

BLAST of CsaV3_1G017260 vs. Swiss-Prot
Match: sp|Q9P0I2|EMC3_HUMAN (ER membrane protein complex subunit 3 OS=Homo sapiens OX=9606 GN=EMC3 PE=1 SV=3)

HSP 1 Score: 195.7 bits (496), Expect = 6.2e-49
Identity = 99/241 (41.08%), Postives = 152/241 (63.07%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP +SF +R+ Y+ N E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of CsaV3_1G017260 vs. Swiss-Prot
Match: sp|Q99KI3|EMC3_MOUSE (ER membrane protein complex subunit 3 OS=Mus musculus OX=10090 GN=Emc3 PE=1 SV=3)

HSP 1 Score: 195.7 bits (496), Expect = 6.2e-49
Identity = 99/241 (41.08%), Postives = 152/241 (63.07%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP +SF +R+ Y+ N E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of CsaV3_1G017260 vs. Swiss-Prot
Match: sp|Q5R7C1|EMC3_PONAB (ER membrane protein complex subunit 3 OS=Pongo abelii OX=9601 GN=EMC3 PE=2 SV=3)

HSP 1 Score: 195.7 bits (496), Expect = 6.2e-49
Identity = 99/241 (41.08%), Postives = 152/241 (63.07%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP +SF +R+ Y+ N E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of CsaV3_1G017260 vs. Swiss-Prot
Match: sp|Q5U2V8|EMC3_RAT (ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3)

HSP 1 Score: 195.7 bits (496), Expect = 6.2e-49
Identity = 99/241 (41.08%), Postives = 152/241 (63.07%), Query Frame = 0


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP +SF +R+ Y+ N E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of CsaV3_1G017260 vs. TrEMBL
Match: tr|A0A1S3C924|A0A1S3C924_CUCME (ER membrane protein complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103498211 PE=3 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 1.0e-133
Identity = 245/246 (99.59%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIPHKSFRSRR+YYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPHKSFRSRRVYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKIVS
Sbjct: 241 LRKIVS 246

[Close]

BLAST of CsaV3_1G017260 vs. TrEMBL
Match: tr|A0A067KTH6|A0A067KTH6_JATCU (ER membrane protein complex subunit 3 OS=Jatropha curcas OX=180498 GN=JCGZ_09018 PE=3 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.3e-125
Identity = 226/246 (91.87%), Postives = 240/246 (97.56%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRS P+PDAK+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSYPIPDAKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RS ANFIP KSFR+RR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSGANFIPPKSFRARRVYFSNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENA+DDTQRMMQMSGFG+DPTK LSAEKD+LDIVQHEW LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAVDDTQRMMQMSGFGLDPTKSLSAEKDSLDIVQHEWALPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRK+VS
Sbjct: 241 LRKLVS 246

[Close]

BLAST of CsaV3_1G017260 vs. TrEMBL
Match: tr|A0A067K3W2|A0A067K3W2_JATCU (ER membrane protein complex subunit 3 OS=Jatropha curcas OX=180498 GN=JCGZ_22252 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 3.3e-124
Identity = 225/246 (91.46%), Postives = 238/246 (96.75%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRS  VPDAK+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSYQVPDAKIVKEGQVIIRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RS ANFIP KSFR+RR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSGANFIPPKSFRARRVYFSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFG DPTK LSAEKD+LDIVQHEW LP+FEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGFDPTKSLSAEKDSLDIVQHEWALPQFEHRAEAV 240

Query: 241 LRKIVS 247
           LRK+V+
Sbjct: 241 LRKLVN 246

[Close]

BLAST of CsaV3_1G017260 vs. TrEMBL
Match: tr|A0A1U8LSI1|A0A1U8LSI1_GOSHI (ER membrane protein complex subunit 3 OS=Gossypium hirsutum OX=3635 GN=LOC107930393 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 3.7e-123
Identity = 223/246 (90.65%), Postives = 235/246 (95.53%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS  VPD K+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSFQVPDPKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           R AANFIP KSFRSRR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RGAANFIPPKSFRSRRVYFSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQM GFG DP+K LSAEKD LDIVQHEW LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMGGFGFDPSKSLSAEKDGLDIVQHEWALPKFEHRAEAV 240

Query: 241 LRKIVS 247
           L+K+VS
Sbjct: 241 LKKLVS 246

[Close]

BLAST of CsaV3_1G017260 vs. TrEMBL
Match: tr|A0A0D2UMF6|A0A0D2UMF6_GOSRA (ER membrane protein complex subunit 3 OS=Gossypium raimondii OX=29730 GN=B456_011G009600 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 3.7e-123
Identity = 223/246 (90.65%), Postives = 235/246 (95.53%), Query Frame = 0


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS  VPD K+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSFQVPDPKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           R AANFIP KSFRSRR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RGAANFIPPKSFRSRRVYFSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQM GFG DP+K LSAEKD LDIVQHEW LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMGGFGFDPSKSLSAEKDGLDIVQHEWALPKFEHRAEAV 240

Query: 241 LRKIVS 247
           L+K+VS
Sbjct: 241 LKKLVS 246

The following BLAST results are available for this feature:

BLAST of CsaV3_1G017260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139548.1	1.2e-133	100.00	PREDICTED: ER membrane protein complex subunit 3 [Cucumis sativus]	[more]
XP_008458952.1	1.6e-133	99.59	PREDICTED: ER membrane protein complex subunit 3 [Cucumis melo]	[more]
XP_023001598.1	3.9e-132	98.78	ER membrane protein complex subunit 3 [Cucurbita maxima] >XP_023519748.1 ER memb...	[more]
XP_022927570.1	5.0e-132	98.37	ER membrane protein complex subunit 3 [Cucurbita moschata]	[more]
XP_022142524.1	5.6e-131	97.97	ER membrane protein complex subunit 3 [Momordica charantia]	[more]

BLAST of CsaV3_1G017260 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12590.1	1.8e-120	86.12	Protein of unknown function DUF106, transmembrane	[more]

BLAST of CsaV3_1G017260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7SXW4\|EMC3_DANRE	1.2e-49	42.92	ER membrane protein complex subunit 3 OS=Danio rerio OX=7955 GN=emc3 PE=2 SV=1	[more]
sp\|Q9P0I2\|EMC3_HUMAN	6.2e-49	41.08	ER membrane protein complex subunit 3 OS=Homo sapiens OX=9606 GN=EMC3 PE=1 SV=3	[more]
sp\|Q99KI3\|EMC3_MOUSE	6.2e-49	41.08	ER membrane protein complex subunit 3 OS=Mus musculus OX=10090 GN=Emc3 PE=1 SV=3	[more]
sp\|Q5R7C1\|EMC3_PONAB	6.2e-49	41.08	ER membrane protein complex subunit 3 OS=Pongo abelii OX=9601 GN=EMC3 PE=2 SV=3	[more]
sp\|Q5U2V8\|EMC3_RAT	6.2e-49	41.08	ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2...	[more]

BLAST of CsaV3_1G017260 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C924\|A0A1S3C924_CUCME	1.0e-133	99.59	ER membrane protein complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103498211 PE...	[more]
tr\|A0A067KTH6\|A0A067KTH6_JATCU	2.3e-125	91.87	ER membrane protein complex subunit 3 OS=Jatropha curcas OX=180498 GN=JCGZ_09018...	[more]
tr\|A0A067K3W2\|A0A067K3W2_JATCU	3.3e-124	91.46	ER membrane protein complex subunit 3 OS=Jatropha curcas OX=180498 GN=JCGZ_22252...	[more]
tr\|A0A1U8LSI1\|A0A1U8LSI1_GOSHI	3.7e-123	90.65	ER membrane protein complex subunit 3 OS=Gossypium hirsutum OX=3635 GN=LOC107930...	[more]
tr\|A0A0D2UMF6\|A0A0D2UMF6_GOSRA	3.7e-123	90.65	ER membrane protein complex subunit 3 OS=Gossypium raimondii OX=29730 GN=B456_01...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR008568	EMC3
IPR002809	EMC3/TMCO1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0034975	protein folding in endoplasmic reticulum
cellular_component	GO:0016020	membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0072546	ER membrane protein complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G017260.1	CsaV3_1G017260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002809	Integral membrane protein EMC3/TMCO1-like	SMART	SM01415	DUF106_2	coord: 4..192 e-value: 6.1E-80 score: 281.6
IPR002809	Integral membrane protein EMC3/TMCO1-like	PFAM	PF01956	DUF106	coord: 4..192 e-value: 4.2E-52 score: 176.2
IPR008568	ER membrane protein complex subunit 3	PIRSF	PIRSF010045	TMP_111	coord: 1..244 e-value: 2.6E-85 score: 284.1
IPR008568	ER membrane protein complex subunit 3	PANTHER	PTHR13116	UNCHARACTERIZED	coord: 1..241
None	No IPR available	PANTHER	PTHR13116:SF5	ER MEMBRANE PROTEIN COMPLEX 3	coord: 1..241

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G017260	Cucsa.002260	Cucumber (Gy14) v1	cgycucB000
CsaV3_1G017260	CsGy1G015670	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G017260	Cla008999	Watermelon (97103) v1	cucwmB057
CsaV3_1G017260	MELO3C021687	Melon (DHL92) v3.5.1	cucmeB017
CsaV3_1G017260	ClCG01G010160	Watermelon (Charleston Gray)	cucwcgB024
CsaV3_1G017260	Lsi02G011010	Bottle gourd (USVL1VR-Ls)	cuclsiB033
CsaV3_1G017260	MELO3C021687.2	Melon (DHL92) v3.6.1	cucmedB014
CsaV3_1G017260	Cla97C01G010180	Watermelon (97103) v2	cucwmbB008

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G017260	Silver-seed gourd	carcucB1083
CsaV3_1G017260	Cucurbita maxima (Rimu)	cmacucB0241
CsaV3_1G017260	Cucurbita moschata (Rifu)	cmocucB0228
CsaV3_1G017260	Cucurbita pepo (Zucchini)	cpecucB0021
CsaV3_1G017260	Cucurbita pepo (Zucchini)	cpecucB0640
CsaV3_1G017260	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G017260	Wax gourd	cucwgoB039
CsaV3_1G017260	Wax gourd	cucwgoB063