Cucsa.002260 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.002260
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	ER membrane protein complex subunit-like protein
Location	scaffold00032 : 25122 .. 36891 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTGGTAGAAAGTTAGAAACTATATTTAAGTCTCGGTATTTCCGTTCGTCGAGTTTCAACTCTCCTCTACCGCGACGGACTGATCACAAAACATTTAATCCAGGCCTCCGTAGTTCGACTTTGAGGAGTTCGCCTGTCAGATCCAGTCATGGCGGAGGATCTAGTGCTCGACACGGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTTGTCATGGTCCTCATTGGAGTTCTCCGCTACTTTGTCTCCAAGCTCATGCGCTCCTCTCCAGTCCCCGATGCCAAAGTCGTACGAGAAGGGTAAATTTTGATTCCTAATCTTCATCATTCGTGACCTTTCATCTTGTTTGTTCCTCACCCAGTTTTTAATTCTGGGTTTCAGGCAAATTGTACTTAGGGCACGGAATTTACGTTCAGCTGCTAATTTTATTCCCCATAAGTCGTTTCGTTCCCGCAGAATTTATTACGGCAATGAGGTTCTTTCCACCCTCTTTTTTtCCCAATGTAGTATGCGATGTATTTTATATCAAAAGGAATGCGTTATGTGATGTGAGTCTGTTATGACATACCAAATTCGCTTCATTAAACATTTTTGGGGAGTAATCGTTTTAGAATATATGTCTATGGTACTTCTTTAATGGCATAAGGTGTAGAAGGTTTAGTTTCTCTCTCGGGATTCAGTTTTGGGTATCAAGTGCAGTCAGAACTCTTATGGGAGCTCTTTATTATTTCTGTTAGTTTTCTAAACTCAGTTTAGTCAAGTTGTTCATCTGTTAGTCATTTTTGTTTGTGATTGATTTATTGAAAATTTGTTACTGCTTCTCCTCTTCAAAGCTTGTAAGTTCTCTGTTGATATCTGAGACTTGATTCAATAATTCAATTTTCATTTCATGGTATCAGAGTAAGCTTTATACAGTTTATGAGATAGGAAACTTATTTACTCTACCATGGGAAAACAAGCACTAAGTTACTAAAGCAGCATTCAGGGTTCGTCATGTAGAGTATTTATGCACTTTCCATAAGGTTTTATAGGTTGTAACGTGTATGATTTATTTCATCCCTGACCATGGTGACATGTGGATGTCGTGTATTGTTTACCAATTTTGGGAATCCATGTCTGAGAATGGTTGCAATTAGATTGTATCTTTTATTTTAGAATGGTTTTGATGTAACTATGATGTTCTAAGTAGCACAGGAGGACAAAGAAACAATCTAATAACCTAGATATTCATATTCCACGTATGCAATTGGCAGGAAAATGGGCTGCTATATGTTCCCAAAGGCCAGGCCCAAAATGCACAAGCACAGATGTTTTCAGATCCAAATATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGGTGACTATAGTTGCATGTTTGATGACTATTTTTCATTGATATCACCAGGAGTTCAATTATTTACATTTTTATTAATCCTTTTATGCTAGACTCTTACTTTTGCGTGGGTCAACTTTTTCTTCTCCGGATTTGTAGCAGGTGTGTTTTTCATACTACTGATGCTTTTAAATGCCTAAGGATGACCTTTCTGGTTGAGTGAATCTCCAAGTTATCTAGGTTTATAATTTCTATACTTTTTAGGCGTTAAATGGTATGACTATGTGCTGACACTCATTACGATTTTtAATACATGGGAAACTTTATAAAATTATTTACTATGTCTCTGCTGTTTCTCTCTCGGTCATTTTCTTTCATTTTTTGATAATCCTGTTGGGTATAACTGGTAGAAAAAGTTAACCTCAGGTATATTAACCTTGTGCATTTAAAGCTGTTTTTCTACCTGTTCAAGCATCTCCTTTTTTCTAAAACCCCCATTTTGTTTGCATCTAATGGTGTATTCTCTCCTTATCCTAGCAAAAATACCCTTTCCTCTGACTCAGAGGTTCCGGTCGATGTTACAGAATGGAATCGACTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGTTCATGGTATTTTCCAAGATCAGTATTTAAAATTCTGGTGCATGAGTTAATGCCTTCTGAAGTTTTTTTtCTGTGTGGTGGGGGGGGgggggAGGAgTTTTGGTTGGATGATTATCGCTAATAGTTTTGGATTACATGTGCCAGGTACTTTCTAAATTTGTTTGGATTAAGAGGTTTATTCAGTCTCATTCTGGGCGAAGAAAATGGTTAGTCTTTCTGTACAACGATTGCATTTATTTTAACTGTTTAATGTATATATGGAATCTTTTTCACAATAAGCAGCATTTTGAAAGTTCCAGCTCTTATACTGTGAATTATGAGAAAGTAATTCTTGGTGCAGCAATGGATGATACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCAACAAAGGTAAATATTGTTAGTCTTTACTGCATTGTATTTTGAACTTCTATCTTAATTTGCAGGTTGTCAAATAAGGCTGTTTAGAGTTTTATATTCATTATTTTTAACTCTCTCTCTCTCTATCTTCAAATGAAATTATGCCTAGATTAATACGTGGAAGTTTGTATTAGGAGTTCAAATCAATTTACATGGTTGAAAAGTTTTGATCTTATGCACATATATATACAGACATATATATGTATGTATGTATACATGGATTAGATTGGACACATCGTTTTTTGTTTAATATCTTCTAAGAAACATGGCTGGCTGGATTTCATTTTGTTTTTTATTCTTCTGCCTGAGAAATAAACTAAATTTGTGAAGGAAGTCACACATATTTTAGTGGTTAAGTTTCAAACTTTTGCTCTTAGTACCTATTGTAAAAGGATAGACTTTATTGAGTCTGTATGTTACTTATAAGTGTTGATGGATGTGTGTTGTATCATTCAAAATGAGTATTGACTGTTTGCTTACGCCTGATACCTAGCACTGGTTCTGGATTCTATGTTCTCGATTGTCTGCATTGATTTTTGATGATCTTCTTTTGGTCGAATTTGCAACTTCAGTAATAACTGATAACATAAATTGAATAGCATTTTTGAGTCTGCTCAATTTTGCACTAGCTCACTAGGAGTAGATTGTTGTCATAAATGAGGTTCAGGTTCTCTCTGACCTTGGGATGTGCGTTAGCTTCAGTTTGAAGATCAGAAATGGAGCTTTTAGTTTTTTCACTGATTGTAATTCTTTTGTACCTATGGTTGTGATTGTGAATTAAAACCGTAGAAGCTCTTTGTGAGAGTACTAAGGGGTATTTGTAAGACCCCTAGTTAGGGAATAGTACCTTTATTAGGAGAATAATTGTATGGTTTTGAGGGCCTATTAATAATTGGTTAGTAGGTTGGTTAGGTTAGTTTCCTATGAACAGTAGGAGAGGGTCTGGTGAAAGGTATGAAGAATTTTATCAAGGTTTTCCTAATTGGGGAATTTGGAAGAGGATTCCCAACCCTCTTGAATATGCTGAGGTATATTGTAATTTCTTCTTGTTGTAGCAATATATATCTATATTTTAGTGTTCTTTGTGTTCTTGAGTCTCTTGTTAGGTGGTATCCCAACGATTGGTATTAGAGTTGTTCTTTCCTGGGACTCTGGATTTAGATCAAATAGGTGTTGGGTAAAGAAGATGTTAGTATTTCTGGAATCAATGTAACAATCAATTAAGGATTATCGACAAGGATGTGTAGAAAGAGAGAGGGAAAGAGAAGTGAGGAGAGTAGAAAGAAAGAGGCGAGGAGGAATAAGAGAAAAGAAGAGGAATAAGAGAAACATGAATTGACTCCACAATTTTTGAAAAGCCACCATGAAAGAAGGCATGGTGTATGTTCTAGCAAGCTCTATTCAGAGAAAATCAACATTGAAGGAAGAAGAGAGAGAAGGCGAAGCTGAAAGAACTTCTGGGAATGGCAAAGAGGTACAACCAATGGAAATAAAAGGAGAAAAAGAGGCAAGGAGGGGTACCACGGCAGAGAGGAAAAAGAGAAGAACAATGGTGTGAAGATGGAGGAATCGAAGGAGAACGGTCATGAAGGAGATGGAATGTCAAAGAAAAGTAGGATTTGTTGGGTTTCTATTTAGTATTTTCCATTTTTGCATTTTTCCTTTATTAGTATTTTAGTCTCTATTTATTCACCAATGTAATAGCTTATTATGTACTTTTGATTTATTCAATACATTACATAAAATTATCATGGTATCAGAGCTCTGGGTTGTCTTCTTGAGCCCTAGCCTAGCCACCAAAGTTCCTTTCGTTCTCTGTCTCCGTCGATCAACATAGATGGAGGCAAATCCATCGCCGTTAGGATTTTCTTTTTTtAATTTAGTCATTCTCCCACTACAACACTTCCCTAATCAAACCCGCGCATCAAAGACTACTCGTCGATATCCCCTGTGGCCAATACATATAGATTCACGTTCACCGTCGCTCCTTGGCCTGTCAACCATTCTTCTGTCGTTTGTTTTCTCCTTGCCCAGATCTGGATTGTCCGTAGCTCGAGCCTCTGTAGGGTTTAGGGTTTAGGGTTTAGCCAGATCCTCTGTTGCCTCCCTTCATCATAATTCATAGCCTACGTTCGACCCAGATACGTCGCCATTCAAACTTTTCTTGTTTGCTTGTGACTCTTTGGTCGTGGGTCTCAGTTTTATTGTGATATAAGAAAGAGTTTTGACGTGAGATGAGGAATTCTACCATTTGGTTTAAACCAGTTCAATCGGAATGATTTAATTGGTCAAGTTtGGTTTAGCTGGTTTGGCCTGATTTTGTATTTTTTCAAATAAGTCATTCATGGGTTTGTTTTAGATCATGGGGATCTTTGTTTTCGGCCCAGAAGTTCTTGTTTTGTTCTTCATGGGTTTTACTATAGATCTCTATACAAGGATCTATGTTTCTATCCTAGAAGTTCTTGGTTACATTCTTTGTGGGTTTGTGTTTCTAGCCTAGAAGTTCTTGGTTACATTCTTTGTGGGTTTGTGTTTCTAGCCTAGAAGTTCTTGTTTTCATTCTTCGTGAGTATGTGGTTATATCCTAGATATGCTGATTTCATTCAGACTTTTTCTTCACAATCTTAAGTCGTTCGCCATTCTACCACCTCTAGTTTGAGGGAGGGTGTTATAGGAAATTAGATTTTATCGGGTTTTTtCCTATTTAATATTTTCCATATTTGTATTTTTCCTTTATTAGTATTTTGATCTCTATTTATTCACTAATGTTATAGGTTATTATGTCCTTTTGATTTATTTAATATATTATATAAAATTATTGAAGAGAAGAAGTGATTCTTAATTGTTCGGGTCCATCCTCAATGACCAAGAGAGAAATGGTCGGTGATGGGGACTTGGTGGTAGTGGAAAAGCCAATCAGTGAAGGTAGGAGCATCAAAGAGAAGGGGGCAAACTGATGGAACTCGTAGCAAACAAAACTCAGAATTCGATCTTGTTGATTGAAATAACAGAAAATTAACAATTCTCTGTTTCCCTCTCTTTCAAGGAATAACAGAAAGATTCAAATACTAGCAAAATAATCCATACCCCCTCCCGCCATTTAAATCCTCCTATCTTCAATAACTGCGTCAACGGAGCTGCAATTGTCCAATAATTCTGGACAAACCTGCGATAATACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcaaggaagcgagaTGgCAGTCAGAaGAAGAAGAAACAGAAGAAGACGCACCTACCGCCAAGCACATGGTTAGAAAAGCAAATAAGAAAGTCGGAAGAAAAACATGTTGGCGATCAGCTGTGGGGGAACAAAGAAACTTTTGCTGCACAAGGATGCAAATAACGGTTGGTTTTGATGGAAAGAGAGAAATAGTTCATATTGGCGGATGGGAAGAGGAATGACGTAAAGAAGAGAGTACGCCAACAACCATGTGTTCGAAAAATTGAGGTAGAAGTCGAAAGAAGTCGTGGCGGAGAAATAAATAAGAGGTGTTCACTGGCGGCCAAAGAAAGAAGAAGATTGATATCTAGGGAGACCAATTGCGGAAAGAGGAAGTGGAGACATGTGATAGTGGTGGTTGACTTGAGATACGAACGGGAGTTGTCAGAATGTAGATGGCGACGAAGCCGCAAGTGAAGCCGAAATTCTTCACAAAGATGCGTTGAAATTTGAAGAGGTAGTCGATGTCAAGCAGCCAAGAACAAAGAAGAAAGCTTGGAAAGGAGGGGGGAATTTTCGTGAAGATGAAGGAAAAGGAATTTGCTACCAACATGAAGTGTTAAGAGGTGGGGTTAGGAATTACAAAATGTTAAACGGTAGAAAAGAGAAGACAAGGTTTACATGGAAAACCCTAGAATAGGGAGAAAAAACCACAATATGGAATCTCTTTTATTATTTTCACGCATAATGAAAGTTACAAAAGTGGATAACTTTATAGGCTTTAACAAGCCTTAATACAAATAAAGGAAATAAGCTCAGGGTAAAGTAAAATACTAAAATACTCTTAGGGCTATAAACTATCAACAAAGCCCTTTATATCCAACACTTCCTCTCAAGTGCCCCGTAGATATCTATCAAACCCAATTTGATAACAAATGAGTCAAAACTTGGCTTGAGTAACCCTTTGGTGAGAACATCAACAACTTGTTGATAAGATGGAATATATGGAATATAGATATTGTCATTGCTCAGTTCTCTTTTATAAAGTGTGTCAATTTCCACATGTTTTGTTCTATCATGTTGTACAAGATTATAGACTATGCTCATTGCCGCTTTATTATCACAATAGAGCTTCATAGGTAAAACATTGTCTTGGTGAAGATCAGACAACTTTCTTCAACCAAATGATTCTCAAACTCATAGCTGAGGTATTCAGCTTCAACAATGCTTCTAGCGATAACACTTTGCTTCTTGCTTCTCCAAGTAACTAGGTTACGTAGACTAAAGGTACAATATCCAAAGATAGATTTTCTATCAATAACTAATTCTGCTCGATCAGAGTCGGTATAAGTCTCAATGCATTTCCTGTCAGTTTTCCTAAACATTAGATCTTTACTTGGAGACCTTTTCAAATATCTCAAAATCCAATTCATAGCTTCCATATGTTCTTCGTAGGGTGTCTGCATAAACTAACTAGCGACAGACAACATAGGATATCTGGTTTAGTGTTAAATAAGTCAATAAGCTTTTATGTAAACTAAACTTAAACCCTACATCAAAATTAAAAATTGAAAGTTCGATTTTTTATTTTCTGAATTGGAGCGATGCTTAACCTCAGGTGGATCGTGGCAGCAAGACCACTCTTTGGCACTTACAATACCCGGTCGCCTATTTTAGTCGTATGTAAAGGATTCTACTCGTCACTTGGTGGAAATTGCGTTACAAGTCGTCTGAAAGTTTGAAGTCAATTACTTTAATATTAAAAAAGTAATAAAGAATAAAATTAGAATTTTTGCCTTGTTTTTAGCCCCAATATTGTCGGTTGATGGATCTTTTAAAGATACGCATATCTGAAGTTAAAAGAAAAAaGAAAAGCATATTGCTAAAACACATATCCAAGACGTATCTAGATGAATCTGTATCAAATGCATATTTGATACGGATTACATACCTTCCCTCATGTATTTGTGCTTCATAAATTGTGGGAGATACATAGCCCTCTCGAAAGGCTATTAATATTTTTGGTATTGCAATATCGGCATCTTTGGTGTATTCTCATGTGTTTTGGTATCCCAACACTTGTTGTCTTGGGATCATATTAGTCATGCGGCCTGTGGCATTGTTACTTTCAAATTGTTAATAAGGAATATAAATCTTAGTTTTGTAGACAGCAGGACCCATGCCTTTAAAGTTTCATTATTAAACTCCTTGTGACATGAATATCATACGTGGCAAGAACTGATCCTATCGGCTTTTAAAAACATTTTCTGGTGCCCTCCTGTTGACCCTTTGGGCGCTTGGTTTTGTGGCAATCTTCAATCAATTGCTTTGTAGTTTGACATGGATTTGATATGTTTGGAACTTTAGAAAAGCAGTTTGTTCTGAAGAAGCCTGGTTTTCTTTAAATTAAGCGTTAGAATACTATAACACAATATACCGGAATATGAGATGACCAATTTCTATTTTGGTCAATTGTTTTCTAGTTTTAAGCGAACTAGTATGTTATGACAAAGCCTGGTTTTCTTCAAGTTAAAATTTTGAATATTTCCAAAATTCAGCAGTGTGGCCAATTCCTAGACTACAATTAGGATGCTAGAATGTGGGACCACCAATTGTATTTTCAGTTGTATACATACTAGCAATTTCAGGTTGGTAGAATATATCATCAAGGAGCCATCTGGCAAAAAGAGAATGGCAGGAGATGCCAAGGGGATGTTTGGCAACCAACATGTAATTGAGTTGGGTGGGTAAAAAATTCACTCACTGATTGGGTGCCCACCAACAAGTGAAGAGGTTTATTACTCTTGTTCGTGTTAATTCACATTTCGCACCTAGTTATTTGTGTGAACTTATATTTCTGACCTCGTTATTTGTGTCAACTCCCCTAATTACTCTCTCCTATAATTACCAACTCAACTCAACTCTCCAAAAATAACTCTTAACTAAACACCCCTTAAATGGAAGATCATGATAAGTTTTGGGGCAGGAGGGGAATCTAATTGAGCTTAAAATGGTATCTTTTTTtAGTACATTTAAAATGGCAAGTTGCTCCTCTGCAAATTGGGGTGAATAAACTTTATAGAGTTGAAGTCAAAACTGAAGATGTAGGCGGTCCTTGGCTTGCCGCGTATTGGATCCTTTGTTTGTGATTGACCCTACATTTGTCTGCTCTGGCTGTAGCCTGTAGGCAGGACAGGCTTTTAGTTATCCTGACTTGGTGCTTTCCCTATTGCTCATTGACCTGGAATTGATACTAGCGGAAAGCACTGGAGTTAAAAACTTGATCAAATGCTTTTCCCCCCTCTTCATACTGTTATTATTTGTTTGATTATTTATTTGCAAACTTGTTGGTACAGTGTTCTCAAAATGCATATTGTAGATTCCTTTTTTTCTCCTCTTACTTTACTTTATATTTAAGGCTAGTTTGTTGCTACATTACCTGCTGTGGGGGGTTAAGCACTTCGGTTTGAGTGCCAAAACAACCTTCAAACTACCAAAAATTAGATGAAATATTGAAAACTCAAGCCAAACATCCCAGGCTGAAGAAACGAACTGGTCAAACCAATTATCTGATTGTTTAATTGGCTTGGTCTTGGAGTTCATTGTTTTGTTGGGCTGGTGTGCTAAAACGACGAAATTTATTGGGTGGCCTTTGTTTCCAAAATAAACCTGGTAGTGCATTAAACAAGAGGAAATGCACGTAGCTTCTAGGCTCGAATCCAAGTCAGTTGATATACCAACTGAGAATAATCCCAGTAAACTGTACTGATTGATAATCATTCAAGTTTGTTTATACATATCATTGTTGGCCATCATTGTTCGTCTGTTTGGCCTATTACTGGCCGACCTTGTCAAACCTGAATGTGATTGAAAATGATATTGTATAGCCTGAAAACCATTATAGCAAACCAAaCGGATCCAAACCCAAaCCGATGGGAGTTTCAATCGGTTTTAGCAGGCTTTTTCGAGTGATTTGGTTTCTTGCACTCCTAGTTGCCTGTGCCCATCTGAGCTAAGTTTCATGTGAAACCTCATCATACAACTTACCATCCTTGGTAATAACGGAGCTCCATCTGAAACATCTAGATACATCAACTAAATATGATTTTCATTGGGATGTGTGAATTGTCAACAATGTTCTAATTGATTTTTAACTTTAATCAATTCACTTTTGAGGTTTTATATGGATCTGCTAATTCTCTGGGTTTTCAGGAAGCACTTTATTCCTTAAAATCCGAACCTCTTTAATTCCATATGCCAACCTCTTTAGTAGGTCAATCATTTGTACGGGCTAGTGGTCATTTAGACCGTTTTTCAAAGTAAACCTGGACACATCTCGATGATCTTTGTTGTCCTATCTATTACTAATCTCTTTGCAAAGAATTAATATAATTGATTAGTTGTTAAGAAACATAATTAATTGATATCACCTTTATGAACACTTGAATTGATCATAATTCAAAATCTTTATTCTGTACTGCTGATCTTGATGGTGTGCATTTTCCTTGGCAGGGTTTGAGTGCCGAGAAAGACAACTTGGACATAGTGCAACATGAATGGGTTTTGCCCAAGTTTGAGCATCGTGCTGAAGCTGTTTTGAGAAAGATTGTCAGCTGATTAGTTTCTGGTTCACATGTCCTCTACTAGTATATTTTCTATGATTATTACGATCTAGGTACTACTCTTTTTTGGGATTGTTGTGAAACATAGAAATCTGTTTTTATCGAACATGGATTTTGTAACATTAAATTATTTTTAGTCAATTAATAGCAATTTGGATCTTTCCAAGTCATGGACAATCAATTTTTATAAAACGATACCGTTAAAATTAGAACGC

mRNA sequence

CCCCTGGTAGAAAGTTAGAAACTATATTTAAGTCTCGGTATTTCCGTTCGTCGAGTTTCAACTCTCCTCTACCGCGACGGACTGATCACAAAACATTTAATCCAGGCCTCCGTAGTTCGACTTTGAGGAGTTCGCCTGTCAGATCCAGTCATGGCGGAGGATCTAGTGCTCGACACGGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTTGTCATGGTCCTCATTGGAGTTCTCCGCTACTTTGTCTCCAAGCTCATGCGCTCCTCTCCAGTCCCCGATGCCAAAGTCGTACGAGAAGGGCAAATTGTACTTAGGGCACGGAATTTACGTTCAGCTGCTAATTTTATTCCCCATAAGTCGTTTCGTTCCCGCAGAATTTATTACGGCAATGAGGAAAATGGGCTGCTATATGTTCCCAAAGGCCAGGCCCAAAATGCACAAGCACAGATGTTTTCAGATCCAAATATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGACTCTTACTTTTGCGTGGGTCAACTTTTTCTTCTCCGGATTTGTAGCAGCAAAAATACCCTTTCCTCTGACTCAGAGGTTCCGGTCGATGTTACAGAATGGAATCGACTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGTTCATGGTACTTTCTAAATTTGTTTGGATTAAGAGGTTTATTCAGTCTCATTCTGGGCGAAGAAAATGCAATGGATGATACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCAACAAAGGGTTTGAGTGCCGAGAAAGACAACTTGGACATAGTGCAACATGAATGGGTTTTGCCCAAGTTTGAGCATCGTGCTGAAGCTGTTTTGAGAAAGATTGTCAGCTGATTAGTTTCTGGTTCACATGTCCTCTACTAGTATATTTTCTATGATTATTACGATCTAGGTACTACTCTTTTTTGGGATTGTTGTGAAACATAGAAATCTGTTTTTATCGAACATGGATTTTGTAACATTAAATTATTTTTAGTCAATTAATAGCAATTTGGATCTTTCCAAGTCATGGACAATCAATTTTTATAAAACGATACCGTTAAAATTAGAACGC

Coding sequence (CDS)

ATGGCGGAGGATCTAGTGCTCGACACGGCCATCAGAGATTGGGTGCTGATTCCGCTCTCCGTTGTCATGGTCCTCATTGGAGTTCTCCGCTACTTTGTCTCCAAGCTCATGCGCTCCTCTCCAGTCCCCGATGCCAAAGTCGTACGAGAAGGGCAAATTGTACTTAGGGCACGGAATTTACGTTCAGCTGCTAATTTTATTCCCCATAAGTCGTTTCGTTCCCGCAGAATTTATTACGGCAATGAGGAAAATGGGCTGCTATATGTTCCCAAAGGCCAGGCCCAAAATGCACAAGCACAGATGTTTTCAGATCCAAATATGGCAATGGATATGATGAAGAAGAATCTCTCCATGATTATACCTCAGACTCTTACTTTTGCGTGGGTCAACTTTTTCTTCTCCGGATTTGTAGCAGCAAAAATACCCTTTCCTCTGACTCAGAGGTTCCGGTCGATGTTACAGAATGGAATCGACTTGAGTACTGTGGATGTCAGCTATGTCAGTAGCCGTTCATGGTACTTTCTAAATTTGTTTGGATTAAGAGGTTTATTCAGTCTCATTCTGGGCGAAGAAAATGCAATGGATGATACACAGAGAATGATGCAAATGTCTGGTTTTGGCATGGACCCAACAAAGGGTTTGAGTGCCGAGAAAGACAACTTGGACATAGTGCAACATGAATGGGTTTTGCCCAAGTTTGAGCATCGTGCTGAAGCTGTTTTGAGAAAGATTGTCAGCTGA

Protein sequence

MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAVLRKIVS*

Homology

[Close]

BLAST of Cucsa.002260 vs. Swiss-Prot
Match: EMC3_DANRE (ER membrane protein complex subunit 3 OS=Danio rerio GN=emc3 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-50
Identity = 103/240 (42.92%), Postives = 156/240 (65.00%), Query Frame = 1


Query: 1   MAE-DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARN 60
           MAE +L+LD+ IR WV++P+  +  L+GV+R++VS L++S      + V + Q+++R+R 
Sbjct: 1   MAEPELLLDSNIRLWVVLPIVFITFLVGVIRHYVSILLQSDKKLTLEQVSDSQVLIRSRV 60

Query: 61  LRSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMI 120
           LR    +IP +SF  R+ Y+ N+E+G  +  K + +       +DP+M  DMMK N++ +
Sbjct: 61  LRENGKYIPKQSFLMRKFYFNNQEDG--FFKKTKRKVVPPSPMTDPSMLTDMMKGNVTNV 120

Query: 121 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 180
           +P  L   W+N+ FSGFV  K+PFPLT RF+ MLQ GI+L ++D S+VSS SWYFLN+FG
Sbjct: 121 LPMILIGGWINWTFSGFVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFG 180

Query: 181 LRGLFSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFE 235
           LR ++SLILG++N  D ++ M  QMSG  M    D  K   AE + L++  H+W L   E
Sbjct: 181 LRSMYSLILGQDNGADQSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWALENVE 238

[Close]

BLAST of Cucsa.002260 vs. Swiss-Prot
Match: EMC3_HUMAN (ER membrane protein complex subunit 3 OS=Homo sapiens GN=EMC3 PE=1 SV=3)

HSP 1 Score: 199.1 bits (505), Expect = 5.5e-50
Identity = 99/241 (41.08%), Postives = 152/241 (63.07%), Query Frame = 1


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP +SF +R+ Y+ N E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of Cucsa.002260 vs. Swiss-Prot
Match: EMC3_MOUSE (ER membrane protein complex subunit 3 OS=Mus musculus GN=Emc3 PE=1 SV=3)

HSP 1 Score: 199.1 bits (505), Expect = 5.5e-50
Identity = 99/241 (41.08%), Postives = 152/241 (63.07%), Query Frame = 1


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP +SF +R+ Y+ N E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of Cucsa.002260 vs. Swiss-Prot
Match: EMC3_PONAB (ER membrane protein complex subunit 3 OS=Pongo abelii GN=EMC3 PE=2 SV=3)

HSP 1 Score: 199.1 bits (505), Expect = 5.5e-50
Identity = 99/241 (41.08%), Postives = 152/241 (63.07%), Query Frame = 1


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP +SF +R+ Y+ N E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of Cucsa.002260 vs. Swiss-Prot
Match: EMC3_RAT (ER membrane protein complex subunit 3 OS=Rattus norvegicus GN=Emc3 PE=2 SV=3)

HSP 1 Score: 199.1 bits (505), Expect = 5.5e-50
Identity = 99/241 (41.08%), Postives = 152/241 (63.07%), Query Frame = 1


Query: 4   DLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNLRSA 63
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S      + V + Q+++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 64  ANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 123
             +IP +SF +R+ Y+ N E+G  +  K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDG--FFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 124

Query: 124 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 183
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 125 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 184

Query: 184 FSLILGEENAMDDTQRMM-QMSGFGM----DPTKGLSAEKDNLDIVQHEWVLPKFEHRAE 240
           +SLILG++NA D ++ M  QM+G  M    D  K    E + L++  H+W L   E    
Sbjct: 185 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEEELM 243

[Close]

BLAST of Cucsa.002260 vs. TrEMBL
Match: A0A067KTH6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09018 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 2.5e-126
Identity = 226/246 (91.87%), Postives = 240/246 (97.56%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRS P+PDAK+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSYPIPDAKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RS ANFIP KSFR+RR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSGANFIPPKSFRARRVYFSNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENA+DDTQRMMQMSGFG+DPTK LSAEKD+LDIVQHEW LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAVDDTQRMMQMSGFGLDPTKSLSAEKDSLDIVQHEWALPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRK+VS
Sbjct: 241 LRKLVS 246

[Close]

BLAST of Cucsa.002260 vs. TrEMBL
Match: A0A067K3W2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22252 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 3.6e-125
Identity = 225/246 (91.46%), Postives = 238/246 (96.75%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRS  VPDAK+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSYQVPDAKIVKEGQVIIRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RS ANFIP KSFR+RR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSGANFIPPKSFRARRVYFSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFG DPTK LSAEKD+LDIVQHEW LP+FEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGFDPTKSLSAEKDSLDIVQHEWALPQFEHRAEAV 240

Query: 241 LRKIVS 247
           LRK+V+
Sbjct: 241 LRKLVN 246

[Close]

BLAST of Cucsa.002260 vs. TrEMBL
Match: A0A0D2UMF6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G009600 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 4.0e-124
Identity = 223/246 (90.65%), Postives = 235/246 (95.53%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS  VPD K+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSFQVPDPKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           R AANFIP KSFRSRR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RGAANFIPPKSFRSRRVYFSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQM GFG DP+K LSAEKD LDIVQHEW LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMGGFGFDPSKSLSAEKDGLDIVQHEWALPKFEHRAEAV 240

Query: 241 LRKIVS 247
           L+K+VS
Sbjct: 241 LKKLVS 246

[Close]

BLAST of Cucsa.002260 vs. TrEMBL
Match: A5BZU9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0187g00170 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 6.9e-124
Identity = 223/246 (90.65%), Postives = 238/246 (96.75%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSS VPD+K+VREGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSQVPDSKIVREGQVIVRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           R+AAN+IP KSFR+R++Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RAAANYIPAKSFRARKVYFNNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENA DDTQRMMQMSGFG+DPTK L AEKD+LDIVQHEW LPKFE RAEAV
Sbjct: 181 RGLFSLILGEENATDDTQRMMQMSGFGVDPTKSLGAEKDSLDIVQHEWALPKFEQRAEAV 240

Query: 241 LRKIVS 247
           LRK+VS
Sbjct: 241 LRKLVS 246

[Close]

BLAST of Cucsa.002260 vs. TrEMBL
Match: A0A0D2VGM8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G009500 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 6.9e-124
Identity = 223/246 (90.65%), Postives = 235/246 (95.53%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRS  VPD K+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSFQVPDPKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           R AANFIP KSFRSRR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RGAANFIPPKSFRSRRVYFSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQM GFG DP+K LSAEKD LDIVQH+W LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMGGFGFDPSKSLSAEKDGLDIVQHDWALPKFEHRAEAV 240

Query: 241 LRKIVS 247
           L+K+VS
Sbjct: 241 LKKLVS 246

[Close]

BLAST of Cucsa.002260 vs. TAIR10
Match: AT4G12590.1 (AT4G12590.1 Protein of unknown function DUF106, transmembrane)

HSP 1 Score: 431.8 bits (1109), Expect = 2.9e-121
Identity = 211/245 (86.12%), Postives = 229/245 (93.47%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS+P PDAK+V+EGQ+V+RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           +  ANFIP KSFR+RR Y+ NEENGLL+VPKG+AQN QA MFSDPNMAMDMMKKNLSMII
Sbjct: 61  KVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILG+ENA+DDTQRMMQM GFG D +K L AEKD LDI+QHEW LP+FE RAE+V
Sbjct: 181 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAESV 240

Query: 241 LRKIV 246
           LRK+V
Sbjct: 241 LRKLV 245

[Close]

BLAST of Cucsa.002260 vs. NCBI nr
Match: gi|449443566|ref|XP_004139548.1| (PREDICTED: ER membrane protein complex subunit 3 [Cucumis sativus])

HSP 1 Score: 487.6 bits (1254), Expect = 1.2e-134
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKIVS
Sbjct: 241 LRKIVS 246

[Close]

BLAST of Cucsa.002260 vs. NCBI nr
Match: gi|659118112|ref|XP_008458952.1| (PREDICTED: ER membrane protein complex subunit 3 [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 1.6e-134
Identity = 245/246 (99.59%), Postives = 246/246 (100.00%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RSAANFIPHKSFRSRR+YYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSAANFIPHKSFRSRRVYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRKIVS
Sbjct: 241 LRKIVS 246

[Close]

BLAST of Cucsa.002260 vs. NCBI nr
Match: gi|643727015|gb|KDP35580.1| (hypothetical protein JCGZ_09018 [Jatropha curcas])

HSP 1 Score: 459.5 bits (1181), Expect = 3.6e-126
Identity = 226/246 (91.87%), Postives = 240/246 (97.56%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRS P+PDAK+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSYPIPDAKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RS ANFIP KSFR+RR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSGANFIPPKSFRARRVYFSNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENA+DDTQRMMQMSGFG+DPTK LSAEKD+LDIVQHEW LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAVDDTQRMMQMSGFGLDPTKSLSAEKDSLDIVQHEWALPKFEHRAEAV 240

Query: 241 LRKIVS 247
           LRK+VS
Sbjct: 241 LRKLVS 246

[Close]

BLAST of Cucsa.002260 vs. NCBI nr
Match: gi|802614846|ref|XP_012074868.1| (PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas])

HSP 1 Score: 456.4 bits (1173), Expect = 3.1e-125
Identity = 224/244 (91.80%), Postives = 238/244 (97.54%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRS P+PDAK+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSYPIPDAKIVKEGQVIVRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RS ANFIP KSFR+RR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSGANFIPPKSFRARRVYFSNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENA+DDTQRMMQMSGFG+DPTK LSAEKD+LDIVQHEW LPKFEHRAEAV
Sbjct: 181 RGLFSLILGEENAVDDTQRMMQMSGFGLDPTKSLSAEKDSLDIVQHEWALPKFEHRAEAV 240

Query: 241 LRKI 245
           LRK+
Sbjct: 241 LRKL 244

[Close]

BLAST of Cucsa.002260 vs. NCBI nr
Match: gi|643714317|gb|KDP26955.1| (hypothetical protein JCGZ_22252 [Jatropha curcas])

HSP 1 Score: 455.7 bits (1171), Expect = 5.2e-125
Identity = 225/246 (91.46%), Postives = 238/246 (96.75%), Query Frame = 1


Query: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSPVPDAKVVREGQIVLRARNL 60
           MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRS  VPDAK+V+EGQ+++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSYQVPDAKIVKEGQVIIRARNL 60

Query: 61  RSAANFIPHKSFRSRRIYYGNEENGLLYVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120
           RS ANFIP KSFR+RR+Y+ NEENGLL+VPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSGANFIPPKSFRARRVYFSNEENGLLFVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKGLSAEKDNLDIVQHEWVLPKFEHRAEAV 240
           RGLFSLILGEENAMDDTQRMMQMSGFG DPTK LSAEKD+LDIVQHEW LP+FEHRAEAV
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGFDPTKSLSAEKDSLDIVQHEWALPQFEHRAEAV 240

Query: 241 LRKIVS 247
           LRK+V+
Sbjct: 241 LRKLVN 246

The following BLAST results are available for this feature:

BLAST of Cucsa.002260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EMC3_DANRE	1.1e-50	42.92	ER membrane protein complex subunit 3 OS=Danio rerio GN=emc3 PE=2 SV=1	[more]
EMC3_HUMAN	5.5e-50	41.08	ER membrane protein complex subunit 3 OS=Homo sapiens GN=EMC3 PE=1 SV=3	[more]
EMC3_MOUSE	5.5e-50	41.08	ER membrane protein complex subunit 3 OS=Mus musculus GN=Emc3 PE=1 SV=3	[more]
EMC3_PONAB	5.5e-50	41.08	ER membrane protein complex subunit 3 OS=Pongo abelii GN=EMC3 PE=2 SV=3	[more]
EMC3_RAT	5.5e-50	41.08	ER membrane protein complex subunit 3 OS=Rattus norvegicus GN=Emc3 PE=2 SV=3	[more]

BLAST of Cucsa.002260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KTH6_JATCU	2.5e-126	91.87	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09018 PE=4 SV=1	[more]
A0A067K3W2_JATCU	3.6e-125	91.46	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22252 PE=4 SV=1	[more]
A0A0D2UMF6_GOSRA	4.0e-124	90.65	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G009600 PE=4 SV=1	[more]
A5BZU9_VITVI	6.9e-124	90.65	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0187g00170 PE=4 SV=...	[more]
A0A0D2VGM8_GOSRA	6.9e-124	90.65	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G009500 PE=4 SV=1	[more]

BLAST of Cucsa.002260 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12590.1	2.9e-121	86.12	Protein of unknown function DUF106, transmembrane	[more]

BLAST of Cucsa.002260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443566\|ref\|XP_004139548.1\|	1.2e-134	100.00	PREDICTED: ER membrane protein complex subunit 3 [Cucumis sativus]	[more]
gi\|659118112\|ref\|XP_008458952.1\|	1.6e-134	99.59	PREDICTED: ER membrane protein complex subunit 3 [Cucumis melo]	[more]
gi\|643727015\|gb\|KDP35580.1\|	3.6e-126	91.87	hypothetical protein JCGZ_09018 [Jatropha curcas]	[more]
gi\|802614846\|ref\|XP_012074868.1\|	3.1e-125	91.80	PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas]	[more]
gi\|643714317\|gb\|KDP26955.1\|	5.2e-125	91.46	hypothetical protein JCGZ_22252 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002809	EMC3/TMCO1
IPR008568	EMC3

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.002260.1	Cucsa.002260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002809	Protein of unknown function DUF106, transmembrane	PFAM	PF01956	DUF106	coord: 4..192 score: 4.1
IPR002809	Protein of unknown function DUF106, transmembrane	SMART	SM01415	DUF106_2	coord: 4..192 score: 6.1
IPR008568	Uncharacterised conserved protein UCP010045, transmembrane eukaryotic	PIR	PIRSF010045	TMP_111	coord: 1..244 score: 2.2
IPR008568	Uncharacterised conserved protein UCP010045, transmembrane eukaryotic	PANTHER	PTHR13116	UNCHARACTERIZED	coord: 1..246 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.002260	Csa1G188170	Cucumber (Chinese Long) v2	cgycuB000
Cucsa.002260	CsaV3_1G017260	Cucumber (Chinese Long) v3	cgycucB000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.002260	Wild cucumber (PI 183967)	cgycpiB000