CsaV3_1G014590 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G014590
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	50s ribosomal protein l22
Location	chr1 : 10135056 .. 10144980 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCGAAGTATAGAAAATATGATATATTTTTTTAAAATTAAAAATTCATTTTAAACCTAATGTAAACAGTTCTATGTGGGTTGCTCATTCCCTCGCCTTCTCTCCCTCTTCCGGCTGATCTCCCTCCCTCAACCTCCCCGCCGTCGACCCTTCCGCCACCCACTCTCTTTGACGACGCCTCCTCAGCCTCCCTCTAGTTCCTTCTGATTTGAAATATTCCCGAATTCAATTTCCTAGCGGAGGGTGAGTTTTTTTTTTTTTTTTTTTTTTTTTGTTGCAATGTGGAGTGAGCTGCTGCAGTTTTGATTATGTGTTGAATTTTTTCTTTTTCCCGTTGAGTTCTTAAAATTGACGGAGTCTTGAACTGAGGTGAATGCTGTGATAGGAGACGAAAGTGTGGATTTTGTTGTAATAGGAAGTGAAGTGATGGGGTCCTCTTATCTGTAGTTTCTTGTATTGGATTTTTAAGTTGTCTGTTAGGGAATTGACTATGTTCACCAATTGATGATCATGTTTTCTTTTCTTTTGGTTTTCAGGACTTCATTTCTTTGGTGATTTTTCATTCGACCAAGCAATTTCGTTGTCATGGTTGGTTGGCAGAGATGTTTACGGTCCATGCTTGGCCATTTGCAAAACAAAGTGGAATTGAGTTACAATGCAGCTTCCAACTCTAGTTATCGTTTGCAATCTTCTCTTTCAAATGGTCAGTTATATTTTCTTCCGATTGAACGTATGAATCGCACAACACTTTCCTCTAGCCCATTCAAACTCTAGTTTTCATCTAAGTTTTTTTTTTTAAAAAAATATTTACTAGTGTTTGTGGTTTTTTATGAGGTGCATGCTTGGATTAGTTAGTCTCATGCTTTTTACTCTTGCACTAACTACTAAGGCAATTTAATTCCTAAATTTTTGAATTTCCTTCAACCAAACTTTTACCTTAAATCAGTTGGAATTATTTTGAGATACAACTTGATGCTTTTTGGAACTAACTTTTTTTTTTTTTTTTTTTTTTGGTTTTATTCTTGAAGTTGCCATTGGGCCCTTTTTAATACTTTTTGTTATACCTCCCAAAATCATTGAGGTATGGATATTGTTTTGATGAAGTATGGAATGACCTTAACTCTTTCAATCTACTTCAAAGTTGTTCTTAAAAGTTCAAAGTGGAGAAAAAACAAAGCAGGTTGTTTTTCAAAACAAACGACCTGATAAGCAAATAATTGGCATTGATTAGCTAAAGCATAGGACGCTTAACTTTCAAGCTAAGCTTTCCAATAAACTTGAAGAGTTGCAACGCTTGGAACTTCAAAAGTTATTTGGATCCTAAAAGTCATAATGAATCTAGAAACTCAGATTCATTCAAATATTTAATGAATTATGTACTTATTTAATGTCACGTGTTCTCATTAGTTATAGTAGTTGAAAGGGCATAAAATTAAATGATGTGTTCTTTCAATTTAAATTTTAAATTAATATAAATAGGGTTGTAGTTTCCACATTTTAGGAAGAGTATCAATATTGAAAAACTTTTTTTTATTCAACCCTTTTCATGTTAAAAATCAATTTATTGGATTAGTCTTGATCAAGCTAATCTTGCAATGAGTTGTCTTAGGATCTAAAAGTGACCATCATAGATTTTAGGTTTGATTCAAGTTAGCATGTGAGTTTTTGCAAGGATCCTAGAAGGACCTCTAGCTTTGCATCTAACAAACATAGTGGGTGCTTATCATGACCCTTTGATTCAGACATTGTGAAAACCTTTCTCTCAGTGCTCTTCCCCCTCTCCCCCCATTCATAGCAGGTGGCCTTGGCCGATCGCCACTCTCTTCTCCTACCCCTGCCTCTGACCACCCTCTCATCTCTGTTCATTATGGTTCAACATATGCAAGAAGATCCTGGCCATTGGCCTCAAAGCTTTCTCCATTGAGGATGAAGCTAGTAATGGGAATCATGCCTGCATCATAGGTGATAGGACTTAAGAAGCATGCAATCTTCGCTCATCAACTCCCCCATTGGTGGATGTTGTGGAGGTCTTATAGACATTTCTAAGAAACCTCATAGACATCCTACCTTTTCCATACTCTATGACATTGTTCTAAATTGGGTCCTTCCTTTCGATTGGCTTAAATACCCTTTCTCTTCTCTCTAGCCATCTTATAAGCTAAAGGTTTCAGTCTGAATTGGAAAACACTTTGGATTAACTTTGAAGAAGTAGCATCCCTTAGTGGGCCTCTTCTGCTGTATTCTTTTTTTGGAATGTGGAGGGAGACATGGATCACATGCTTTAATGTTGTGGATTTGTGGTGTTTTTGTAGAATGTCTTTTCCTAGGAGTTCGGTTTAGAGTAGTATTGGAGACTCAATTTATGATTCCTTCCCCATTCATCTTTTAGGAAGAATGGTCATTTTTTATGGTTTGAGGGGGTATGTGCTCTGTTATGGGGTCCTTGGGGGAGAGAAATAACAAAGCTTTTAGAGTTGCTGTGAGGGACTATAATGATGTTTGGTTCTTGGTGAGTTTTCATTGTTTTCTTTGAGCCTTGATTCCAAAGATTTTTTGTAAGTACTCTACACACAATATTTACCTGGTTGGAATCTCTTTAGTCTTTCTACAGTAGGATTTCCGGAGAATGACTGTTTCTGCAAAGTTTGGCTCCAAGGCTTTAAATAAGCACCGGGCACTGCTTCTCTCCACAAAAGTCGAGGCCCAAGGAAGAACATTATGAAACAAGCAACAGTCCTTAATCCATGATATTGTATTATCCAAAGTTGAGAATGGGGCTACTACAATATTTTGGCGTGATCAGTACTTCAAGGAAGCTTTTTGTTTAATAACTTCCTCTTGCTCTCCAGCAGAAAGATGGCTTCTGCCAAAGATTTATGGAGGGTTGATTTGGCTTTCTAGTATCTAGATTTCGTTTGAAATTTGAGTTACTAAGAAGTTCCTGAATGGGTTGAGTTGAGCCTTTTATTATTCAAACTCTGTTTAGCCAATAAGGATGACATGTGTGTGTGTCCTCTTGGAAAATATGGGGTCATTTTCATGAAAGCATTACTACGAAGTTTTGATCATTCCTCAATGTGTGATTTTCTTCTATTCAATAAAGCTATTTGGTATAATATCTTTCATTTTATTTCAATGAAAGCTTTACTTTTAGTTGTACATGAAGGTCATTGTGCATAATGTTTACCTGAAAAAGATAGAATTCTAATTTATTCTTTGGGAGCTATATCACAGGGAAATAAACAAATATGATAGGCGTTCAAATCATCTCCTTGACACAACTCTTTCCCCAAATCAATGCATCCTTTAGAAACATGATTCGGAGTCATAGAGCCACATTTTCATAACTTGCCCTTTTTGTTCACAGTTTTTGGAAGGATATGTTGGTGACACTCAATTGGTTGGTGGTCCTTCTAAATGATCCTTCCATTCTTCAAAACCGTTTTCTCTAGGGATATCCTTTTAGAGACGAGAACGAGATCCTATGGAAGAATTTATTTTGTTATTTTTTCTTGTACTTTTCTGTAGTTAGTATGGTTAGAAAGAAATCAAAGGATTTTTGGAACCAAGGAAAGGGTCTATGTGGACTTTTTTGACAATATTCTTTTTTGCCTTTATCGTGCTCTAATTGTAAATTGAATTCTCCTAGTTCTGTCTCTCTTTTGTCCCATTGAAGAAGTTCAATGAAACTTCTTTGGATTCTGTTTTATTCCTCGTCTGTTTTCATTTATCTTAATTTAATTTAAATTTCATACATCTTTGAAATTATTTCTTATATAGAAAAACTTCTGGTTCAAATGTTCAATTTAGCAAATATGAGTTTTTGGGCATTTACTTGGACATCTCCTCCATGGACCACTGCCTCTTTCGTTGGCTGCAAAATTGGTTTTTGGCCTAACTCTTACCTGTGCCTTCCCCTTGGTGGAAAACTGTGCTCACTCACCTTTCCAGAGCCTATTGTTGAGAAAGTTGAGAGTAAGCTCAGAAATTGAGAGCATGCCTTTAGATTGAAAGGTGGAGTCTAACTGACTAACTCTTTCCAAAGCCACCCTATCTCCAAAATCGCCCCGAAGATTGAAAAGCTCAGAGGAAAGTTTGTGGGGAGGTCCCATATGACTGGTGGCTCTCACCTCATCCAATGGAAGAAGGGTCAAAAGCCTTTATCCCGTGGTGGCTCGGTATTGAATATTGATCATATCTAGCCAAATGGATTTGGAGATACATGGAAAATGCAAGGTTATTGAAGCTAAATATGGCCTTTCAAAGCAGGCTGAAGTAGTCATCCATAGCTTTATGATGAAAGTATGATTAAGGTAATTTAGATAAATTCCTAGGTTTCTGTTCTGCAGCTTCAGTTGGTCCTTGGCAGTCCCTTCAAGTTTGGCTGATTTTAGTATGTAAATCTTCTTGCGGGACCCTTTAAGGGAGGAGATGCTTGGAAGCTGTGGCTTGAAAGGAATAACAACACTTTCAAGTGCTCTGAACAATATTTTGCTGCATCAAATTCTGTCATCTTTATGGCTCTTTACTGGTGTAAAGGATCACATCCTTTCTCAATGTCTTGATACTTTTGGGCAGATTTTTTTCTTTTGTAAATCCATTTTTGTGATTTTGGGACTCTTCTCCTGTTTTATAATTATTTTGTTTATCAGACAAATCATTTCCTCTCAAAAGCAAAAAGAAAAGAAAAATGAAAAGTGAAAAAGGAAGAGAGATCGTATACGGCTGTTATGGTGGGAATGCAATAAAAGAGGTTTTAAAGATGAAGTTGATGAGATAGACAGGCGTTAGAGTAAAAAAAATTATGGTTATTATGCCGTCGTGGAATATTTGATAACCCTTCCCTTACCACTTTATTGGATTGGTTGCTATCCTAGTAACTCATCTTTCTAAGAGGACTCCCTTAAAGTGTTTATCCTATTAGTTAGTAACTACAGAAATGGTTTGCATCTGACTAAAATCAGTAGAACCACAACAGAATCATAAATTGAAGTTGCTGAGTTGCACCAATTTCTTATGCAGGGGAATTGCCTTATTTACAGAGACTTTTGAAGCCATCCTCAGCGGTCATTGCACAACCTGATTTTCGGTGTCTCCAACAAATGGTATACATGGCAACCATACCATCCCTTGAATTTCTATGAAAATAAATTTTGTTTGAAGAATTTTTTTATGAAAACAACTTTGGAGTATGTGTTTTTATTTTACAAATCACTTGAATTCTAATTTCTGAAAATGTCTTTGCCGTATTTTACTTTCTTCCTTTTATAGGGAATTTCCAGTTCAAGGATGCTATTGGCAGATAAACCTGAGGAAGCAGTCTCATCTCCTCTGACATCTGCTTTGGCTTTAAGCAGCGGAAAAGATGGAGATAAAACAGACCAAAAAGTAATCTGTAAACGTTCCCAAGTCCAAGCTGTATTAAAGGGAATCAAACAGGTGAAGTCTTTGGACTATTCTTGTCACTTGCACACCAAAAACTTGAGTAAAAGCGGTGAAAGTCATGAGGGTGGAACTTGTTATTGAAAAACGAGGCTTTGTAATTATAGAATTTGATTAAATCTGAAGTTTTATGTTTTTAAGTCATAGTTATCAAAATGCTAATTGGATTGTATAAATTCTGTTAGCCTCATTTCTCTTGGGCCAACCTTTAGTTGTGTTAGAAATAATGAGCTTAGGTCATGGTGAAAGCCCATGGGTAGTTAAGACTTACTTTGCCCTAACTTTTTATTCTTTTCAAGGCTCATGTTGTCTATAAATTTCCCCCCTTTGTACCTTTATGAATCATTAGAAAATAATAAGTCTTTCAGCACCGTGTTTTTCTTCCTGTACTAGGGTTTGACATAAATTTGTGTGTTCTTTGTCTCTACTTTAAATGAGTTGTTTATTGAAAGTTTTTTGGGTTGGAGATTGAGATTGTAATTGAAATATCCTCCCCGTTTTCTTGTCAAGTTTTGTAATGCATTTTATATAACTGAAAGATGGCTTCCACGAAAAAGGTGGACTCATTTAGGTTTATCTTTTATTTGAAAAGAATTAATGGGACTGTTGCATTTGAATTTTTCTTCCAGAGTCCCAAAAAGGTCAACTTAGTTGCTGCTCTAGTTCGAGGCATGCGCGTTGAAGATGCACTGATGCAGTTACAATTAACTGTGAAGCGAGCTTCAAAAACTGTTTATCAGGTGAAACATTATCTTAGGATGCTTGATGTACACCTCGTTTATCAATCACTGTGTTTGAATATTTCTTTGATTTCATTATTTGGGGGAAACTTAAGCTGAGAAATAAACATACAATTACTTGAGTTTAGTCAACCAGTTTAGCTTCTATTATAGACAATTTCGATATATAAAAAAGATTTAGTAGCAGGAGGATGCATTGTTTAGCCACTGAATGAGGCTGAGAAGTTTTGTTTCGTTGTTCTTGCAAAAAAAAGGTCATTTGACAATAAGTATGGTTAATGGTTCTAGAGCTTGACACTATTTGGTTTTTAAAAAAATTAGACGCCGACTTTGCAAGGTACTGTGAATTCCTTCCATGTCATAAATTGTACAAAAGAAGCATGAGCACTTTAGCTTGATTAGGAAGTTGGGCATTTTGATTTGATGGCCTAAAATCCAATAATTAGGCCATCAAATCTTGAGTAAAGGGGTAGAAGCAGATGAGGAAAAAATTCGAAGTATGGTGAATTGGCCTCAACCTAAAGATATGATCGGACTGAGAGGCTTTTTGGGTTTGACCGGGTATTACTGAAGGTTTGTAAAAAGGGTACGGAGAAATTACAGCACCCTTAACCAAACTATTACAGTAGAACTCTTTTAGATTGAGTGAGGAAGCTACGGAAACTTTTGAGAAACTAAAACTGGCAATAACAACTATCCCTGTGTTAGCCTTACCCGATTGGTCCCTCCCATTCATTATAGAAACTGATGCATCTGGAATTGGGCTAGGAGCAGTGCTTTCCCAAAATGGCCATCCTATTGCATTTTTTAGCCATAAATTGTCCCTAAGAGTCCAAGCTAAATCCTTCTATGAGAGAGAACTGATGGCCTTGTCCTTTCTGTTAAAAACGGAGGCATTATCTTTTGGGAAAGAAGTTCACGATAATATCTGACCAAAAAGCCTTGAAATTTCTACTGGAGTAGAGAGAAGTCGAACCATAGTTTCCAAAGTGGCTTACCAAGCTTCTTGGATATGATTTTGAAATTCTTTATCAACCGTGATTACAGAATAAAGTAGCTAATGCTCTTTCTAGAATGGAACTATCTCCGGAACTTAATACCTTGTCCACTCTTGGTATCGTGGATTTAGAAGTGGTGCTGAAAGAAGTAGAGGAAGACAGTGAACTCCAAAGACTTGTTGACGATTTGAAGAAAAATCCAGGGGAAGGGAACAAGTATCGATGGGAGAATGGAAGACTCTTATATAAAAGAAGACTAGTGCTCTCCAAAAACTCAATGCTCATCCCCAACCTATGACTCATCTTTCATGATTCGATCTTATGGGGCTATTCAGAGTTTTTGAGAACCTACAAGAGAATGAATGGAGAGTTACATTGGAAGGGGATGAAGACGGATGCCAAGAAGTACATAGAGCAGTGTGATACTCGTCAGCGAAACAAGTACGAAGCTACCAAACCAGCTGGATTGTTACAGCCCATCCCAATCCCTGATCGGATATCGGAAGATTGGTCTAGGTAGCCCACCTATGACAGGGGGAGTATGTCATTGTAGCGGTGATTGATAGACTGAGCAAATGTGCTTACTTTATCTCCATGAAACACCCCTTCTTAGCTAAACAAGTGGCTGATACATTCATTGATAAGATTGTGAGAAAGCATGACATCCCGAAGTCCATCATTACCGATAGAGATAAGATATTTCTTAGTAATTTTTGGAAGAAGTTGTTTGCAACCATGGGCACTATATTGAAAAGAAGCACCGTATTTCATCCTCAAATGGATGGACAAACAAAACGAGTAAACATATGCCTAGAGACCTATTTGAGGTGTTTATGTAATGAGCAACCGAACAAATGGAATAAGTTTCTTCCCTAGGTAGAGCTGTGGTATAACACTACCTTTCATGCCTCCACTGAGACTACACCATTCCAAAAAGTATACGGGAGACCCCCACCACCTCTGTTATTATATGGAGATAGAAAGACTCCTAACAACGAGGTAGAATCATTGCTGAAAGAAAGGGGTTTAGCTTTAAATGCATTAAAAGAAAACCTATGTGGCCTAGAACCGAATGAAGAAAATGGCAGATCTTAAGCGAAGGGAACTCAAGTTCAAGGTGGGAGATGAAGTGTATTTGAAGTTGAGAGGATAGGCAATGTTCGTTGGCCAGGAAAAGGTGTGAGAAACTTGCCCCTAAATTTGATGGACCCTACAAAATAATAGAAGAAATTGGAGAAGTGGCTTACAGATTACAATTGCCACTGGAGGCTGTCTTACATAATGTATTTCACGTTTCCCAACTGAAGCTAAAACTGGGAAAGCAACAAGAGGTACAGCACCAACATTCCGTTCTGACTGAAGAATTTGAATTGCAGTTGTGGCTTGAGACAATTTTGGGAAATGGTTGATCAAATGGAAAGGGTTACCGGAAAGTGAAGCTACATGGAAATCAGTGTATCAAATGAATCGGCAATTCTCTATGTTCCACCTTGAGGACAAGGTGAACTTAGAACCGAAGGGTGTTGTAAGGCCTCCTATTATCCACACTTATAAAAGAAAGGGCAGGCAGGTAATTGTACAGTAATCCAATGGTGAGGGAATGATGCAGTTTGTGGGGCCCACAGGGAGGAAAGAGAGGGAGAGCTATAAGTATATCTTTAGGGGATTGCGTAGCTAGGTTATCTTTTTGCGAAAAGGTTGCTGTTAGCATTTTGAGAGGATTTTTCCCAGCCTTTACTATTTTCTTGAATTTCCATCTTTGAACTACTTGTTATTTCATATTTTGGCTGAAGGTAATATAAATAACAAGAGTACTGTCTCTGTTTTAGCCCGTTTTTGTTAGGATTTATTGTGTTTATATTGTTAGAATCCTAACATATTGCTAAGATTTGCTTACGATGTTAAAATTTGTGTCGTGACATTGTGAAGGTCATTCATTCAGCCAAAGCAAACGCAACCCACAACCACGGAATGGATTCAGATCGACTCCTTGTTGGTAAATGAAGCAAGTAAAGATAACCCATCCTTCATATTACAAGGGTTTGTGTATTTGACTTCTTGTTATCTTGTACAGCTGAAGCATTTGTGGGTAAGGGATTGTTTCGGAAAAGATTATCATATCATGCTAAAGGAAGATGTGGAGTCGAAGTTAAACCAGAATGCCGACTAACAGTTGTTCTTAGGGAGACAACACCTGAAGAAGAGGCAAAGATAGCAAAGCTTAAAGTAAGTAACTTCCGCAAGCTTACCAAGCGTGAACACCAACTTGTACCTCATAAGCTTATTGAGACCACACCTATCTGGAACCGGAAGGGCAAAGCCAAAGCGAACACAGAATGTTGAAAGGCTTTGTAGTATGATAATAACTGCTTCCAGTTGAGTTTCCTAATCTCTTTCTGCTAATGGTTTAATTTCATGTCCTTTTGTTCTAGACAAGTTAGTTAAGCAGGAAAAGGGATTTTGATGTGGTAAAATGTCCTCCATTAAGAATAAAATGTTCTTTAATGACAATTTTTATTCATTTTACCCAGCTTATTTTTAGTGACTCCCTTGATCTCTTTTCTTCGCCCATTTCAATTATGAGATCTTCCAAGAAAGATTTGTACGTCATATCTAAGGAGCAAGTTGTATAACCTTCATCATTGTCTTTGATATGGCTAGTTTAGAAGATTCTGCGTTGTTAGTTTGTTTGGTGGTAATTTTTTATTCATCAATTAGCGTCGAGTTGGTTTGTTTTGGCATCA

mRNA sequence

ATGGTTGGTTGGCAGAGATGTTTACGGTCCATGCTTGGCCATTTGCAAAACAAAGTGGAATTGAGTTACAATGCAGCTTCCAACTCTAGTTATCGTTTGCAATCTTCTCTTTCAAATGGGGAATTGCCTTATTTACAGAGACTTTTGAAGCCATCCTCAGCGGTCATTGCACAACCTGATTTTCGGTGTCTCCAACAAATGGGAATTTCCAGTTCAAGGATGCTATTGGCAGATAAACCTGAGGAAGCAGTCTCATCTCCTCTGACATCTGCTTTGGCTTTAAGCAGCGGAAAAGATGGAGATAAAACAGACCAAAAAGTAATCTGTAAACGTTCCCAAGTCCAAGCTGTATTAAAGGGAATCAAACAGAGTCCCAAAAAGGTCAACTTAGTTGCTGCTCTAGTTCGAGGCATGCGCGTTGAAGATGCACTGATGCAGTTACAATTAACTGTGAAGCGAGCTTCAAAAACTGTTTATCAGGTCATTCATTCAGCCAAAGCAAACGCAACCCACAACCACGGAATGGATTCAGATCGACTCCTTGTTGCTGAAGCATTTGTGGGTAAGGGATTGTTTCGGAAAAGATTATCATATCATGCTAAAGGAAGATGTGGAGTCGAAGTTAAACCAGAATGCCGACTAACAGTTGTTCTTAGGGAGACAACACCTGAAGAAGAGGCAAAGATAGCAAAGCTTAAAGTAAGTAACTTCCGCAAGCTTACCAAGCGTGAACACCAACTTGTACCTCATAAGCTTATTGAGACCACACCTATCTGGAACCGGAAGGGCAAAGCCAAAGCGAACACAGAATGTTGA

Coding sequence (CDS)

ATGGTTGGTTGGCAGAGATGTTTACGGTCCATGCTTGGCCATTTGCAAAACAAAGTGGAATTGAGTTACAATGCAGCTTCCAACTCTAGTTATCGTTTGCAATCTTCTCTTTCAAATGGGGAATTGCCTTATTTACAGAGACTTTTGAAGCCATCCTCAGCGGTCATTGCACAACCTGATTTTCGGTGTCTCCAACAAATGGGAATTTCCAGTTCAAGGATGCTATTGGCAGATAAACCTGAGGAAGCAGTCTCATCTCCTCTGACATCTGCTTTGGCTTTAAGCAGCGGAAAAGATGGAGATAAAACAGACCAAAAAGTAATCTGTAAACGTTCCCAAGTCCAAGCTGTATTAAAGGGAATCAAACAGAGTCCCAAAAAGGTCAACTTAGTTGCTGCTCTAGTTCGAGGCATGCGCGTTGAAGATGCACTGATGCAGTTACAATTAACTGTGAAGCGAGCTTCAAAAACTGTTTATCAGGTCATTCATTCAGCCAAAGCAAACGCAACCCACAACCACGGAATGGATTCAGATCGACTCCTTGTTGCTGAAGCATTTGTGGGTAAGGGATTGTTTCGGAAAAGATTATCATATCATGCTAAAGGAAGATGTGGAGTCGAAGTTAAACCAGAATGCCGACTAACAGTTGTTCTTAGGGAGACAACACCTGAAGAAGAGGCAAAGATAGCAAAGCTTAAAGTAAGTAACTTCCGCAAGCTTACCAAGCGTGAACACCAACTTGTACCTCATAAGCTTATTGAGACCACACCTATCTGGAACCGGAAGGGCAAAGCCAAAGCGAACACAGAATGTTGA

Protein sequence

MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPDFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKLTKREHQLVPHKLIETTPIWNRKGKAKANTEC

Homology

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BLAST of CsaV3_1G014590 vs. NCBI nr
Match: KGN64904.1 (hypothetical protein Csa_1G153000 [Cucumis sativus])

HSP 1 Score: 522.7 bits (1345), Expect = 7.5e-145
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60
           MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD
Sbjct: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60

Query: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120
           FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG
Sbjct: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120

Query: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180

Query: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240
           LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL
Sbjct: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240

Query: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 272
           TKREHQLVPHKLIETTPIWNRKGKAKANTEC
Sbjct: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 271

[Close]

BLAST of CsaV3_1G014590 vs. NCBI nr
Match: XP_016903208.1 (PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis melo] >XP_016903212.1 PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis melo] >XP_016903215.1 PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis melo] >XP_016903217.1 PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis melo])

HSP 1 Score: 505.0 bits (1299), Expect = 1.6e-139
Identity = 260/271 (95.94%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60
           MV WQRCLRS+LGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSA IAQPD
Sbjct: 1   MVSWQRCLRSILGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAGIAQPD 60

Query: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120
           FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKV+CKRS+VQAVLKG
Sbjct: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVVCKRSKVQAVLKG 120

Query: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMD+DRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDADRL 180

Query: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240
           LVAEAFVGKGLFRKRLSYHAKGRCG+EVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL
Sbjct: 181 LVAEAFVGKGLFRKRLSYHAKGRCGIEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240

Query: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 272
           TKRE++LVPHKLIETTPIWNRKGKA+A TEC
Sbjct: 241 TKRENRLVPHKLIETTPIWNRKGKARATTEC 271

[Close]

BLAST of CsaV3_1G014590 vs. NCBI nr
Match: XP_022955020.1 (uncharacterized protein LOC111457075 [Cucurbita moschata])

HSP 1 Score: 438.0 bits (1125), Expect = 2.4e-119
Identity = 226/271 (83.39%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           M GWQRC+RSMLGH+Q +VELSYNAA+NS+ YR QS+LS G+LPYLQRLLKPSS  + QP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLK 120
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKV+ K S+VQA+LK
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 120

Query: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 180

Query: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240
           LLVAEAFVGKG F+KR+SYHAKG+CG++V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 181 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 240

Query: 241 LTKREHQLVPHKLIETTPIWNRKGKAKANTE 271
           L+KRE +LVPHKLIETTPIWNRKGKA+AN E
Sbjct: 241 LSKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CsaV3_1G014590 vs. NCBI nr
Match: XP_022971240.1 (uncharacterized protein LOC111470023 [Cucurbita maxima])

HSP 1 Score: 438.0 bits (1125), Expect = 2.4e-119
Identity = 227/271 (83.76%), Postives = 251/271 (92.62%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           M GWQRC+RSMLGH+Q +VELSYNAA NS  YR QS+LS G+LPYLQRLLKPSS  + QP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLK 120
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKV+ K S+VQA+LK
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 120

Query: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 180

Query: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240
           LLVAEAFVGKGLF+KR+SYHAKG+CG++V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 181 LLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 240

Query: 241 LTKREHQLVPHKLIETTPIWNRKGKAKANTE 271
           L+KRE +LVPHKLIETTPIWNRKGKA+AN E
Sbjct: 241 LSKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CsaV3_1G014590 vs. NCBI nr
Match: XP_023540568.1 (uncharacterized protein LOC111800895 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.0 bits (1125), Expect = 2.4e-119
Identity = 226/271 (83.39%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           M GWQRC+RSMLGH+Q +VELSYNAA+NS+ YR QS+LS G+LPYLQRLLKPSS  + QP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLK 120
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKV+ K S+VQA+LK
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 120

Query: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 180

Query: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240
           LLVAEAFVGKG F+KR+SYHAKG+CG++V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 181 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 240

Query: 241 LTKREHQLVPHKLIETTPIWNRKGKAKANTE 271
           L+KRE +LVPHKLIETTPIWNRKGKA+AN E
Sbjct: 241 LSKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CsaV3_1G014590 vs. TAIR10
Match: AT4G28360.1 (Ribosomal protein L22p/L17e family protein)

HSP 1 Score: 302.4 bits (773), Expect = 2.9e-82
Identity = 171/271 (63.10%), Postives = 216/271 (79.70%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASN---SSYRLQSSLSNGELPYLQRLLKPSSAVIA 60
           MVGW+R L++++  +  +V+ S+ + +N   S+  L+S  S G   YLQ LL+PS +  +
Sbjct: 1   MVGWKRNLQTVIRQVGRRVKNSHISTANYSSSTRNLESPFSQG---YLQSLLRPSYS--S 60

Query: 61  QPDFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAV 120
           +P +  LQQ+GIS+SR L A   EE VSSPL+S   L SGK+    +QK+I KR +VQAV
Sbjct: 61  RPLYHHLQQLGISTSRQLQAS--EEPVSSPLSSPALLGSGKE---EEQKIIPKRQKVQAV 120

Query: 121 LKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDS 180
           LK IKQSPKKVNLVAALVRGMRVEDAL+QLQ+TVKRA++TVY+VIH+A+ANATHNHG+D 
Sbjct: 121 LKSIKQSPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLDP 180

Query: 181 DRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNF 240
           DRLLVAEAFVGKGLF K+++YHAKGR G+   P CRLTV++RETTPEEEA+IA+LKV NF
Sbjct: 181 DRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTPEEEAEIARLKVHNF 240

Query: 241 RKLTKREHQLVPHKLIETTPIWNRKGKAKAN 269
           +K +KRE QLVPHKLIET+PIWNR+G  KAN
Sbjct: 241 KKKSKRERQLVPHKLIETSPIWNRRG-TKAN 260

[Close]

BLAST of CsaV3_1G014590 vs. TAIR10
Match: AT1G52370.1 (Ribosomal protein L22p/L17e family protein)

HSP 1 Score: 294.3 bits (752), Expect = 7.8e-80
Identity = 167/265 (63.02%), Postives = 208/265 (78.49%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASN--SSYRLQSSLSNGELPYLQRLLKPSSAVIAQ 60
           M GWQ+ L+ ++  +  +V+ S+ + +N  S+  L+S  S G   YLQ LL+  S   ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLR--STYSSR 60

Query: 61  PDFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVL 120
           P +  LQQ+GIS+SR L A   EE VSSPL+S   L SGK+    +QK+I KR +VQAVL
Sbjct: 61  PLYYHLQQLGISTSRQLQAG--EEPVSSPLSSPALLGSGKE---EEQKIIPKRQKVQAVL 120

Query: 121 KGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSD 180
           K IKQSPKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+ANATHNHG+D D
Sbjct: 121 KSIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPD 180

Query: 181 RLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFR 240
           RLLVAEAFVGKGLF K+++YHAKGR G+   P CRLTV++RETT EEEA+IA+LKV NF+
Sbjct: 181 RLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFK 240

Query: 241 KLTKREHQLVPHKLIETTPIWNRKG 264
           KL KR+ QLVPHKLIET+PIWNR+G
Sbjct: 241 KLNKRQRQLVPHKLIETSPIWNRRG 255

[Close]

BLAST of CsaV3_1G014590 vs. TAIR10
Match: ATCG00810.1 (ribosomal protein L22)

HSP 1 Score: 61.6 bits (148), Expect = 8.5e-10
Identity = 36/109 (33.03%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 112 SQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 171
           ++V A+ + I  S  K   V   +RG   E+ALM L+L   R    ++++++SA ANA+H
Sbjct: 11  TEVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASH 70

Query: 172 NHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRE 221
           N G     L++++A V +G   K+L   A+GR     +  C +T+VL +
Sbjct: 71  NKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLED 119

[Close]

BLAST of CsaV3_1G014590 vs. Swiss-Prot
Match: sp|Q0ANQ5|RL22_MARMM (50S ribosomal protein L22 OS=Maricaulis maris (strain MCS10) OX=394221 GN=rplV PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-20
Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 112 SQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 171
           ++ +A L+ I+ SP+K+NLVAAL+RG +VE AL  L+ + KR SK V + + SA ANA +
Sbjct: 13  NEARAKLRMIRTSPQKLNLVAALIRGKKVERALADLEFSRKRISKEVKKTLESAIANAEN 72

Query: 172 NHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRE 221
           NHG+D D L+V+EAFVGK L  KR    A+GR    +KP   LT+V+RE
Sbjct: 73  NHGLDIDSLVVSEAFVGKNLVMKRFRARARGRGAKILKPFSELTIVVRE 121

[Close]

BLAST of CsaV3_1G014590 vs. Swiss-Prot
Match: sp|Q92QG5|RL22_RHIME (50S ribosomal protein L22 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rplV PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.9e-20
Identity = 55/118 (46.61%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 110 KRSQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 169
           K ++ QAV + I+ SP+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA ANA
Sbjct: 11  KDNEAQAVARTIRVSPQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVKKTLESAIANA 70

Query: 170 THNHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEA 228
            +NH +D D L+VAEAFVGK +  KR     +GR     KP   LT+V+RE   + EA
Sbjct: 71  ENNHDLDVDSLIVAEAFVGKSIVMKRFHARGRGRASRVEKPFAHLTIVVREVEAKGEA 128

[Close]

BLAST of CsaV3_1G014590 vs. Swiss-Prot
Match: sp|A6U864|RL22_SINMW (50S ribosomal protein L22 OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=rplV PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.9e-20
Identity = 55/118 (46.61%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 110 KRSQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 169
           K ++ QAV + I+ SP+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA ANA
Sbjct: 11  KDNEAQAVARTIRVSPQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVRKTLESAIANA 70

Query: 170 THNHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEA 228
            +NH +D D L+VAEAFVGK +  KR     +GR     KP   LT+V+RE   + EA
Sbjct: 71  ENNHDLDVDSLIVAEAFVGKSIVMKRFHARGRGRASRVEKPFAHLTIVVREVEAKGEA 128

[Close]

BLAST of CsaV3_1G014590 vs. Swiss-Prot
Match: sp|B8ELF8|RL22_METSB (50S ribosomal protein L22 OS=Methylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2) OX=395965 GN=rplV PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19
Identity = 55/118 (46.61%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 110 KRSQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 169
           K ++ +AV + ++ SP+K+NL+A L+RG +VE AL +L+ + KRA+  V + + SA ANA
Sbjct: 11  KDNEAKAVARMLRISPQKLNLLAQLIRGKKVERALAELEFSRKRAAFDVRKTLESAIANA 70

Query: 170 THNHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEA 228
            +NH ++ D L+VAEAFVGK L  KR S  A+GR G   KP   LT+VLRE     +A
Sbjct: 71  ENNHSLEVDDLVVAEAFVGKALVMKRFSPRARGRSGKIQKPFSHLTIVLREVAVAAQA 128

[Close]

BLAST of CsaV3_1G014590 vs. Swiss-Prot
Match: sp|Q98N52|RL22_RHILO (50S ribosomal protein L22 OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=rplV PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19
Identity = 54/116 (46.55%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 112 SQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 171
           ++ +AVL+ I+ SP+K+NLVAAL+RG +V  AL  L+ + KR S TV + + SA ANA +
Sbjct: 13  NEARAVLRTIRISPQKLNLVAALIRGKKVATALSDLEFSAKRISGTVKKTLESAIANAEN 72

Query: 172 NHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEA 228
           NH +D D L+VAEA+VGK +  KR     +GR     KP   LT+V+RE   + EA
Sbjct: 73  NHDLDVDALVVAEAYVGKSIVMKRFHARGRGRASRIEKPFSHLTIVVREVEEKGEA 128

[Close]

BLAST of CsaV3_1G014590 vs. TrEMBL
Match: tr|A0A0A0LVB7|A0A0A0LVB7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G153000 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 4.9e-145
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60
           MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD
Sbjct: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60

Query: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120
           FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG
Sbjct: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120

Query: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180

Query: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240
           LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL
Sbjct: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240

Query: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 272
           TKREHQLVPHKLIETTPIWNRKGKAKANTEC
Sbjct: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 271

[Close]

BLAST of CsaV3_1G014590 vs. TrEMBL
Match: tr|A0A1S4E5G5|A0A1S4E5G5_CUCME (50S ribosomal protein L22, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107992071 PE=3 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 1.1e-139
Identity = 260/271 (95.94%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60
           MV WQRCLRS+LGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSA IAQPD
Sbjct: 1   MVSWQRCLRSILGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAGIAQPD 60

Query: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120
           FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKV+CKRS+VQAVLKG
Sbjct: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVVCKRSKVQAVLKG 120

Query: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMD+DRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDADRL 180

Query: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240
           LVAEAFVGKGLFRKRLSYHAKGRCG+EVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL
Sbjct: 181 LVAEAFVGKGLFRKRLSYHAKGRCGIEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240

Query: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 272
           TKRE++LVPHKLIETTPIWNRKGKA+A TEC
Sbjct: 241 TKRENRLVPHKLIETTPIWNRKGKARATTEC 271

[Close]

BLAST of CsaV3_1G014590 vs. TrEMBL
Match: tr|A0A2I4G372|A0A2I4G372_9ROSI (uncharacterized protein LOC109004295 OS=Juglans regia OX=51240 GN=LOC109004295 PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 7.2e-96
Identity = 190/268 (70.90%), Postives = 230/268 (85.82%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASN-SSYRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           MVGWQR ++ +L     +VE +YNA++N SS RL+SS    ELPYLQRL +P SA I++P
Sbjct: 1   MVGWQRHIQFVLRRFGKRVEYNYNASANFSSVRLESSNFTSELPYLQRLWRPPSANISRP 60

Query: 61  DFRCLQQMGISSSRMLLADKPEE-AVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVL 120
            ++  QQ+GISSSR LLAD  EE A+ SPLT  LAL+SGK  D+ +QK + K S+VQAVL
Sbjct: 61  LYQYFQQLGISSSRKLLADLSEESAIPSPLTPVLALNSGKSDDQ-NQKAVSKPSKVQAVL 120

Query: 121 KGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSD 180
           KGIKQSPKK+NLVAALVRGMRVEDAL+QLQ+TVKRA+KTVYQVIHSA+ANATHNHG+D D
Sbjct: 121 KGIKQSPKKINLVAALVRGMRVEDALLQLQVTVKRAAKTVYQVIHSARANATHNHGLDPD 180

Query: 181 RLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFR 240
           RLL+AE+FVGKGLF+KR+SYHAKG+CG++V+PECRLTVV+RE T EEEA+IA+L+V NFR
Sbjct: 181 RLLIAESFVGKGLFKKRVSYHAKGKCGIKVRPECRLTVVVREMTAEEEAEIARLRVHNFR 240

Query: 241 KLTKREHQLVPHKLIETTPIWNRKGKAK 267
           KLTKRE +LVPHKLIETTPIWNRKGKA+
Sbjct: 241 KLTKRERRLVPHKLIETTPIWNRKGKAR 267

[Close]

BLAST of CsaV3_1G014590 vs. TrEMBL
Match: tr|A0A2P5F1L8|A0A2P5F1L8_9ROSA (Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_125170 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.2e-95
Identity = 192/272 (70.59%), Postives = 227/272 (83.46%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASN-SSYRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           MVGWQR ++++L H+  KVE SY  ++N    R++S     ELP LQRLLKP S +I++P
Sbjct: 1   MVGWQRHIKALLNHVGKKVEHSYTQSANLGCSRIESLPKLAELPSLQRLLKPPSPIISRP 60

Query: 61  DFRCLQQMGISSSRMLLADKPEEA-VSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVL 120
            ++  QQ+GISSSR LLAD  EEA + SPLT  LAL+SGK  D+  QK + K S+VQAVL
Sbjct: 61  FYQYFQQLGISSSRKLLADSSEEAPIRSPLTPVLALNSGKTEDE-QQKAVSKPSKVQAVL 120

Query: 121 KGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSD 180
           K IKQSPKKVNLVAALVRGMRVEDAL+QLQ+TVKRASKTVYQVIHSA+ANATHNHG+D D
Sbjct: 121 KNIKQSPKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPD 180

Query: 181 RLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFR 240
           RLLVAEAFVGKG F+KR+SYHAKGR G++V+PECRLTV +RETTPEEEA+IA+LKV NFR
Sbjct: 181 RLLVAEAFVGKGFFKKRVSYHAKGRSGIKVRPECRLTVAVRETTPEEEAEIARLKVHNFR 240

Query: 241 KLTKREHQLVPHKLIETTPIWNRKGKAKANTE 271
           KLTKRE +LVPH+LIETT IWNRKGKA +NTE
Sbjct: 241 KLTKREKRLVPHQLIETTSIWNRKGKASSNTE 271

[Close]

BLAST of CsaV3_1G014590 vs. TrEMBL
Match: tr|A0A2P4H2G6|A0A2P4H2G6_QUESU (50s ribosomal protein l22 OS=Quercus suber OX=58331 GN=CFP56_48084 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.4e-94
Identity = 190/268 (70.90%), Postives = 228/268 (85.07%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASN-SSYRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           MVGWQR +  +L  +  +VE SYN ++N SS RL+SS S GEL YLQRL +P SA I++P
Sbjct: 1   MVGWQRHIHLVLSRVGKRVEHSYNLSANFSSSRLESSFSPGELTYLQRLWRPPSANISRP 60

Query: 61  DFRCLQQMGISSSRMLLADKPEE-AVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVL 120
            ++  QQ+GISSSR LLA+  EE A+ SPLT  LA++SGK+ D+ +QKV+ K S+VQA+L
Sbjct: 61  FYQYFQQLGISSSRKLLAESSEEKAIPSPLTPVLAINSGKNKDQ-NQKVVSKASKVQAIL 120

Query: 121 KGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSD 180
           KGIKQSPKKVNLVAALVRGMRVEDAL+QLQ+TVKRA+KTVYQVIHSA+ANATHNHG+D D
Sbjct: 121 KGIKQSPKKVNLVAALVRGMRVEDALLQLQVTVKRAAKTVYQVIHSARANATHNHGLDLD 180

Query: 181 RLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFR 240
           RLLVAEAFVGKG +RKR+SYHAKG+CGV+ +PECRLTVV+RE T EEEA+IA+L+V NFR
Sbjct: 181 RLLVAEAFVGKGFYRKRVSYHAKGKCGVKERPECRLTVVVREMTAEEEAEIARLRVHNFR 240

Query: 241 KLTKREHQLVPHKLIETTPIWNRKGKAK 267
           KLTKRE +LVPHKLIETT IWNRKGK K
Sbjct: 241 KLTKRERRLVPHKLIETTSIWNRKGKGK 267

The following BLAST results are available for this feature:

BLAST of CsaV3_1G014590 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64904.1	7.5e-145	100.00	hypothetical protein Csa_1G153000 [Cucumis sativus]	[more]
XP_016903208.1	1.6e-139	95.94	PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis melo] >XP_0169...	[more]
XP_022955020.1	2.4e-119	83.39	uncharacterized protein LOC111457075 [Cucurbita moschata]	[more]
XP_022971240.1	2.4e-119	83.76	uncharacterized protein LOC111470023 [Cucurbita maxima]	[more]
XP_023540568.1	2.4e-119	83.39	uncharacterized protein LOC111800895 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_1G014590 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28360.1	2.9e-82	63.10	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.1	7.8e-80	63.02	Ribosomal protein L22p/L17e family protein	[more]
ATCG00810.1	8.5e-10	33.03	ribosomal protein L22	[more]

BLAST of CsaV3_1G014590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0ANQ5\|RL22_MARMM	3.0e-20	50.46	50S ribosomal protein L22 OS=Maricaulis maris (strain MCS10) OX=394221 GN=rplV P...	[more]
sp\|Q92QG5\|RL22_RHIME	3.9e-20	46.61	50S ribosomal protein L22 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rplV ...	[more]
sp\|A6U864\|RL22_SINMW	3.9e-20	46.61	50S ribosomal protein L22 OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=...	[more]
sp\|B8ELF8\|RL22_METSB	2.5e-19	46.61	50S ribosomal protein L22 OS=Methylocella silvestris (strain DSM 15510 / CIP 108...	[more]
sp\|Q98N52\|RL22_RHILO	2.5e-19	46.55	50S ribosomal protein L22 OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 91...	[more]

BLAST of CsaV3_1G014590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVB7\|A0A0A0LVB7_CUCSA	4.9e-145	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G153000 PE=3 SV=1	[more]
tr\|A0A1S4E5G5\|A0A1S4E5G5_CUCME	1.1e-139	95.94	50S ribosomal protein L22, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1079...	[more]
tr\|A0A2I4G372\|A0A2I4G372_9ROSI	7.2e-96	70.90	uncharacterized protein LOC109004295 OS=Juglans regia OX=51240 GN=LOC109004295 P...	[more]
tr\|A0A2P5F1L8\|A0A2P5F1L8_9ROSA	1.2e-95	70.59	Ribosomal protein OS=Trema orientalis OX=63057 GN=TorRG33x02_125170 PE=3 SV=1	[more]
tr\|A0A2P4H2G6\|A0A2P4H2G6_QUESU	1.4e-94	70.90	50s ribosomal protein l22 OS=Quercus suber OX=58331 GN=CFP56_48084 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0015934	large ribosomal subunit
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR005727	Ribosomal_L22_bac/chlpt-type
IPR036394	Ribosomal_L22/L17_sf
IPR001063	Ribosomal_L22

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G014590.1	CsaV3_1G014590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 117..219 e-value: 1.4E-27 score: 95.8
IPR001063	Ribosomal protein L22/L17	CDD	cd00336	Ribosomal_L22	coord: 114..218 e-value: 1.39386E-35 score: 123.755
IPR036394	Ribosomal protein L22/L17 superfamily	GENE3D	G3DSA:3.90.470.10		coord: 93..251 e-value: 4.0E-48 score: 165.2
IPR036394	Ribosomal protein L22/L17 superfamily	SUPERFAMILY	SSF54843	Ribosomal protein L22	coord: 110..221
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	TIGRFAM	TIGR01044	TIGR01044	coord: 116..217 e-value: 2.4E-24 score: 83.5
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	PANTHER	PTHR13501	CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED	coord: 86..259
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	HAMAP	MF_01331_B	Ribosomal_L22_B	coord: 112..221 score: 20.882
None	No IPR available	PANTHER	PTHR13501:SF0	39S RIBOSOMAL PROTEIN L22, MITOCHONDRIAL	coord: 86..259

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G014590	CSPI01G14420	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G014590	Cucsa.199960	Cucumber (Gy14) v1	cgycucB322
CsaV3_1G014590	CsGy1G014350	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G014590	Cla003541	Watermelon (97103) v1	cucwmB049
CsaV3_1G014590	MELO3C004760	Melon (DHL92) v3.5.1	cucmeB010
CsaV3_1G014590	ClCG01G012560	Watermelon (Charleston Gray)	cucwcgB026
CsaV3_1G014590	Lsi03G001000	Bottle gourd (USVL1VR-Ls)	cuclsiB048
CsaV3_1G014590	MELO3C004760.2	Melon (DHL92) v3.6.1	cucmedB009
CsaV3_1G014590	Cla97C01G011760	Watermelon (97103) v2	cucwmbB008
CsaV3_1G014590	Bhi08G000070	Wax gourd	cucwgoB051

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G014590	Cucumber (Chinese Long) v3	cuccucB046
CsaV3_1G014590	Cucurbita maxima (Rimu)	cmacucB0188
CsaV3_1G014590	Cucurbita maxima (Rimu)	cmacucB0234
CsaV3_1G014590	Cucurbita maxima (Rimu)	cmacucB0473
CsaV3_1G014590	Cucurbita maxima (Rimu)	cmacucB0694
CsaV3_1G014590	Cucurbita maxima (Rimu)	cmacucB0962
CsaV3_1G014590	Cucurbita moschata (Rifu)	cmocucB0172
CsaV3_1G014590	Cucurbita moschata (Rifu)	cmocucB0221
CsaV3_1G014590	Cucurbita moschata (Rifu)	cmocucB0951
CsaV3_1G014590	Cucurbita pepo (Zucchini)	cpecucB0631
CsaV3_1G014590	Cucurbita pepo (Zucchini)	cpecucB0635
CsaV3_1G014590	Cucurbita pepo (Zucchini)	cpecucB1044
CsaV3_1G014590	Bottle gourd (USVL1VR-Ls)	cuclsiB005
CsaV3_1G014590	Bottle gourd (USVL1VR-Ls)	cuclsiB021
CsaV3_1G014590	Melon (DHL92) v3.5.1	cucmeB072
CsaV3_1G014590	Watermelon (Charleston Gray)	cucwcgB030
CsaV3_1G014590	Watermelon (97103) v1	cucwmB009
CsaV3_1G014590	Watermelon (97103) v1	cucwmB074
CsaV3_1G014590	Watermelon (97103) v2	cucwmbB025