CsaV3_1G014280 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGGTCCACGAGAAGCAAAGCAAAGAGAGAGAGAGAAGAATGGGTGCAATCCCCAGATGGCTTGAATGTCTACTGTCTACAACATTTTTCAATGCCTGTCCTTCACATAAACAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTCTCATTCTTCCTCCTTTTGCTTCTATTGTAGATCTAACAAACACCATCATCATCATGTCATTCAGGTCCTTTCTTCTTTCTTAATTCCTTCCTTCCCTTCTTATTTCTTCCTTTTCAATTCATTTCCAACTCATAATGTTTTTTCGTCTCTTCAATTGGTTGGTAGTGCGTTGTACCTTCTGGTTGGGTTTCTATTCTTCTTTGTTTTGATACCATTTTCTGTAGTTTGGGAAAGTGGGATTGTGCAAATGTGTCGTTGTAGCTTTTGGATACAAGTTTAAAATATGTTTTATCATATTGGATTAATAATGCATGGTTATAAAGATTACTTTCTTTACAACAATAAAATGTGAAATAAATTTTACAAAAATAGTTCAACAGTACAGAATTATCAAGCACATTTTTTGGAGTATTAATAGAGTATTTGTTTTCAATTTGTGTAGATTCGAAGATCTTCATACCACGACGTGGTAAGAGTGGCCGAGATAGAGAATGTCTTGGATATAAGTGAAGTTCAAACTTACGTGATAAACAGTGCAAGAGTTCTGTTTCTAAATGAGAGACCTCAACCAAAGAGCTCAACAAGTAAAGGAGGCTCTCATGTGTGTGAGATTTGTACTAGAAGTCTCTTGGATCCCTTTCGTTTTTGTTCTCTTGGTTGCAAGGTAATAATTTTCTACCTCCATCTTTCCATTTTCTAGACATATTATTCTATTCGGGTTCAAAATTTTGACGTATGGAAAAGCATTGTTCACATCTCTACTAATTTGAGCTATGCTCCAATTAGTGAGACTTTAGTTTTTTTAAATTATTTTTATAAGTTAAATGAATAGGTGATATTCATACAAAAGGGTTATGATAATGTTAAAATATACTTCCATAATTGAGTTGAAAATACTCTCATATATGTTTTAATTTTAATTTTGATGAAATAGACATAGCACTCATAAAATCGAAATTTACCTACTTCTATGTATGTGACCTAATATTGGAGGGTGCAACTTACCTAACCCACAAATTGCCTTATATATTAGGGAAAACAATAATACACATTTAAAATAATAATAATAATAATAACCACTTAATTATCTCTTTAATTTTTTTCCATTACAGCCAATTCTTTCTTTTAATATTTAACAACCAAGCCTTTCATTGTAAATAATAAAATATCAACACATACAAAAAATAAAAATGAAACTTCAACATATTAAATTGAAATATATACAAAACCAAGCTTTGACATTTCTTTAAAAAGTTATATACACACAAATACAATGTAAGTTTAACAGGCTATATTGTTATCAAAATTAAGTATTCTATAGTTTATTTTTTATTGGTTTTTATAAATTGAAACTTTGTTTTTTTCTATTTTCATATTCTTTATTATTATTATTATTATTTCGAAGGAGAATCAAACCTACCTAACTTTACAAATATTAAATCAGATGAAGTGATATGCTTTTCTTTTTAGTCAAATATTTTCTTATTAAACCAACTATTTGGATGAATGAACTAGGTCATCGGAATAAAGACAAACATGGATTCGGGGTTTTACTTAAGAGGAAAGAATAATGAGGAAGTTCTAGGAAGAAGATTGGGATCAAAGGAAGAGGATGAAGAGGAAGAAGAAGGATTGCGTGTAGGGAGAAATGAAGAAGAAGAAGAAGGTGAGATATACCAAAATCACACGCATTCTTCACATTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAATTAACTTAATTTAATTAATTTTTTCCATTTCATTTTTAATTTATTAATTTATTAATTTATTATATACCAACTCCTTTTTCCTTTTAAATTGTTTTTTAAAAAATCTAATAAGTCATAATTGTAACAATTCATTGCACTGCACATGATCTCCCACGTGTAATTATTAATTGACATCTCACCATACACAATTTTTTTTTTTCTTTTTAACAAACCTTACATTTGATTGTTAATTCTTTAACAAACCCTCCACTGGGTTTATATATATGTGTGTGTCTTATTTATTTTATGCGAAAATTCTGCATTGATAAATTGTAATTAATCTAATCATCAAAATATTTTAAATTTTTATATTTAGTAGTTTGGAGTACAATAAAATATCTTAAAAT ATGGGTGCAATCCCCAGATGGCTTGAATGTCTACTGTCTACAACATTTTTCAATGCCTGTCCTTCACATAAACAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTCTCATTCTTCCTCCTTTTGCTTCTATTGTAGATCTAACAAACACCATCATCATCATGTCATTCAGATTCGAAGATCTTCATACCACGACGTGGTAAGAGTGGCCGAGATAGAGAATGTCTTGGATATAAGTGAAGTTCAAACTTACGTGATAAACAGTGCAAGAGTTCTGTTTCTAAATGAGAGACCTCAACCAAAGAGCTCAACAAGTAAAGGAGGCTCTCATGTGTGTGAGATTTGTACTAGAAGTCTCTTGGATCCCTTTCGTTTTTGTTCTCTTGGTTGCAAGGTCATCGGAATAAAGACAAACATGGATTCGGGGTTTTACTTAAGAGGAAAGAATAATGAGGAAGTTCTAGGAAGAAGATTGGGATCAAAGGAAGAGGATGAAGAGGAAGAAGAAGGATTGCGTGTAGGGAGAAATGAAGAAGAAGAAGAAGGTGAGATATACCAAAATCACACGCATTCTTCACATTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA ATGGGTGCAATCCCCAGATGGCTTGAATGTCTACTGTCTACAACATTTTTCAATGCCTGTCCTTCACATAAACAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTCTCATTCTTCCTCCTTTTGCTTCTATTGTAGATCTAACAAACACCATCATCATCATGTCATTCAGATTCGAAGATCTTCATACCACGACGTGGTAAGAGTGGCCGAGATAGAGAATGTCTTGGATATAAGTGAAGTTCAAACTTACGTGATAAACAGTGCAAGAGTTCTGTTTCTAAATGAGAGACCTCAACCAAAGAGCTCAACAAGTAAAGGAGGCTCTCATGTGTGTGAGATTTGTACTAGAAGTCTCTTGGATCCCTTTCGTTTTTGTTCTCTTGGTTGCAAGGTCATCGGAATAAAGACAAACATGGATTCGGGGTTTTACTTAAGAGGAAAGAATAATGAGGAAGTTCTAGGAAGAAGATTGGGATCAAAGGAAGAGGATGAAGAGGAAGAAGAAGGATTGCGTGTAGGGAGAAATGAAGAAGAAGAAGAAGGTGAGATATACCAAAATCACACGCATTCTTCACATTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA MGAIPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQIRRSSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICTRSLLDPFRFCSLGCKVIGIKTNMDSGFYLRGKNNEEVLGRRLGSKEEDEEEEEGLRVGRNEEEEEGEIYQNHTHSSHSNSRRRKGIPQRAPF
BLAST of CsaV3_1G014280 vs. NCBI nr
Match: XP_004139563.1 (PREDICTED: uncharacterized protein LOC101204359 [Cucumis sativus] >KGN64871.1 hypothetical protein Csa_1G136780 [Cucumis sativus]) HSP 1 Score: 365.9 bits (938), Expect = 9.1e-98 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. NCBI nr
Match: XP_008462300.1 (PREDICTED: uncharacterized protein LOC103500687 [Cucumis melo]) HSP 1 Score: 300.1 bits (767), Expect = 6.1e-78 Identity = 173/212 (81.60%), Postives = 175/212 (82.55%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. NCBI nr
Match: XP_022969532.1 (uncharacterized protein LOC111468520 [Cucurbita maxima]) HSP 1 Score: 273.1 bits (697), Expect = 8.0e-70 Identity = 160/214 (74.77%), Postives = 166/214 (77.57%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. NCBI nr
Match: XP_023538148.1 (uncharacterized protein LOC111799005 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271.6 bits (693), Expect = 2.3e-69 Identity = 159/214 (74.30%), Postives = 165/214 (77.10%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. NCBI nr
Match: XP_022938109.1 (uncharacterized protein LOC111444296 [Cucurbita moschata]) HSP 1 Score: 269.6 bits (688), Expect = 8.9e-69 Identity = 161/214 (75.23%), Postives = 169/214 (78.97%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. TAIR10
Match: AT2G27930.1 (PLATZ transcription factor family protein) HSP 1 Score: 197.6 bits (501), Expect = 7.8e-51 Identity = 130/214 (60.75%), Postives = 143/214 (66.82%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. TAIR10
Match: AT1G76590.1 (PLATZ transcription factor family protein) HSP 1 Score: 165.6 bits (418), Expect = 3.3e-41 Identity = 101/232 (43.53%), Postives = 121/232 (52.16%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. TAIR10
Match: AT1G21000.1 (PLATZ transcription factor family protein) HSP 1 Score: 155.2 bits (391), Expect = 4.4e-38 Identity = 96/241 (39.83%), Postives = 126/241 (52.28%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. TAIR10
Match: AT1G43000.1 (PLATZ transcription factor family protein) HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36 Identity = 88/212 (41.51%), Postives = 115/212 (54.25%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. TAIR10
Match: AT1G32700.1 (PLATZ transcription factor family protein) HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36 Identity = 91/210 (43.33%), Postives = 110/210 (52.38%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. TrEMBL
Match: tr|A0A0A0LY15|A0A0A0LY15_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136780 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 6.0e-98 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. TrEMBL
Match: tr|A0A1S3CGK9|A0A1S3CGK9_CUCME (uncharacterized protein LOC103500687 OS=Cucumis melo OX=3656 GN=LOC103500687 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 4.1e-78 Identity = 173/212 (81.60%), Postives = 175/212 (82.55%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. TrEMBL
Match: tr|B9GEV1|B9GEV1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G212400v3 PE=4 SV=2) HSP 1 Score: 248.1 bits (632), Expect = 1.8e-62 Identity = 131/213 (61.50%), Postives = 146/213 (68.54%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. TrEMBL
Match: tr|A0A2H5Q225|A0A2H5Q225_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_188960 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 9.1e-62 Identity = 125/208 (60.10%), Postives = 143/208 (68.75%), Query Frame = 0
BLAST of CsaV3_1G014280 vs. TrEMBL
Match: tr|B9HQR1|B9HQR1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G003200v3 PE=4 SV=2) HSP 1 Score: 245.7 bits (626), Expect = 9.1e-62 Identity = 129/209 (61.72%), Postives = 145/209 (69.38%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|