ClCG01G013970 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G013970
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	PLATZ transcription factor family protein
Location	CG_Chr01 : 28161791 .. 28164433 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTAATCCCAAGATGGCTTGAATCTTTACTTTCAACAACATTTTTCTATGCTTGTCCTTCACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTACCATCCCTCTTTTTGCTTCTATTGTCGATCCAACAAACACCATGATCATCATGTCATTCAGGTTTCTTCTTCTTCTTTCGTTTCTATTCCTTTCTACGTCTAAATCGAAAAATTATTCAATGAAATCGGTACATTTGGAGGGTATAGTGCTCCATTCTTTCATTTTGTATAGTTTTACCAATGTAGAGGAAATTTTAATTTAGGAATAGAATATATCTATTAGTATGTTGATATATATCCGTAAATCGTAGTGTTCAACATACTTTGAGAATTAATTGATAACTCCGATTTTTTTATTATTATTTTTTATGTTTATAAATACCCATAAAACATGAAGAAATATCACCTACTGATCTCAATGCAGAGATATGCTAATACAAAAATCCATATCTATGATTTCAATGTTGGGTAATTTATTATATTAAAAAAAGAATTAAGAATTTTAAAGGTTTGTCTTCTCTTCAATAGGTTGGTAGTTGTACTTTCTTGGTGGGTTTCCTCTTCTTCTTTCCTCAAAATTTTGTACCATTTTTTGTTTGTTTGTTTTCTTTTTCTTTTTCTTTTTTTAAAAAGTGGAGTTGTGCAAATGACATGGTACCATTTGGATACAAGTTTAAAATATGTATATCACAATGGATAAATGCATGGTTATAAGAATTAAGTTTTTGAAGTATACATGTTTTAAAATTATTTTATTCAATATATAAAATTATCAGCCACATTATGGTAGAGTATAAAAAAGATATTTATTTTGATTTTACACAGATTCGGAGGTCTTCGTACCATGACGTGGTGAGAGTGGCCGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACTTACGTGATAAATAGTGCAAGAGTTTTGTTTCTAAATGAGAGGCCTCAACCGAAGAGCTCTACAAGTAAAGGAGGCTCTCATATGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCGTTTCGTTTTTGCTCTCTTGGTTGTAAGGTAATTATTTAATTTCTACCTAATTGTCTTCTCATTTTTCTAATCATTATTTTTTTTATTCAATTTCTGTCAAATAAAATAATGTCTTCTTTAACTAGTTGAGTTAAGTTCGAATTAATAAAATTTTAGCATCTTTTTAGGTTATTTAGTGTTCTTTCTAATTGTCACTAAATTATTAAATTATGCTGTTAAATTATGAAATAGGTAGTTCAAGTGGTCCCTTTGGTTTGCAATGTGGTTCTATTTATTATTTTTCCTTCTAGAAAAAGTTGTGTAATTATAATAATTTGGCATTCTCTCAATGGGGAACTGTGTAGTTTATTTTAGAAATATTATGGGTTATTTTCCAGTTTTTCTCCTCAATTTTTCAAAAAAGTTTTAATTTTATTTTTTATGTATGTAAAGAAAATATGTTAATTTGATATTCATAAAATGGTTATAATAATGTTAAAACATAGTTTCTTAATTGAGTTGAAAACACTCTCATCTATATATGTTTATATTTAATATTGGTGTAAAAAAGACATATCTACCCACAAAATCCAAATTTACCTACTTTTATATATGTGACATAATATTGGAGGTGTAACTTACCTAACCCACGAGTGCCTCTATATTTTATGAAAACAATACCCTTTGAAAAAAAGTATTCTACTACGTACTAAATTAACAAGAGAAATTATCTTAAATGACAAAACTACTAAAAATATTTATAATTAATAGTAAAATACACAGCCTATTAACGATAGATCGTGATAATAGATAGTGAAATTTTACTATATTTATAAATATTTTGGTTTCTTTTGTTATATCTAAAAAGAGTCCAATTAACAATATTTTGTTTCTTAACTAAAAAGATTTTTTCTCTTTTAATATGGAACAACAACACTTCAACATTGAATGAAAACAAAATACGCAAAAGGAATAAATTTGAAACGGTATAAAATCAATGATATGAAATTGAAAAATAACACAAATATTAGAACCTAAGTTTGACACATTTTTTCCATGCATCTTGAAAAAAATTATACAATGTCTTCTCAAACATTGTGTAGCTAGCTAATATAGTTATCCAGACTAAGAGCCCTGAGAAAAAATTATCTAAAATACCCAGACTTTGAAGTAGTTGTCGAACACTCTAATTTTTTTTAAATGATTTATTTTTTAAATTAAACAGTTGAAAATGTATTTTAAACACACCTTAAGTATTCTATAGAGCTTCTTATAAATTGAGCTTCATTTTTATATGTTCTGTGTGATTAAGTCAACTACTTTATTATGGGTGATTTAGGTCATCGCGATAAAGACGTACGACGATTTGAGCTTTTACTCGAGAGGAAAGAAGAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGGATCGGAGGAAGAGGAGGAAGAAGAAGAAGAATTATTATTGCGTGTTGGAAGAAACCAAGAAGCTGAAATATACCAAAATAACACGCATCCTTCACATTCTTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA

mRNA sequence

ATGGCAGTAATCCCAAGATGGCTTGAATCTTTACTTTCAACAACATTTTTCTATGCTTGTCCTTCACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTACCATCCCTCTTTTTGCTTCTATTGTCGATCCAACAAACACCATGATCATCATGTCATTCAGATTCGGAGGTCTTCGTACCATGACGTGGTGAGAGTGGCCGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACTTACGTGATAAATAGTGCAAGAGTTTTGTTTCTAAATGAGAGGCCTCAACCGAAGAGCTCTACAAGTAAAGGAGGCTCTCATATGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCGTTTCGTTTTTGCTCTCTTGGTTGTAAGGTCATCGCGATAAAGACGTACGACGATTTGAGCTTTTACTCGAGAGGAAAGAAGAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGGATCGGAGGAAGAGGAGGAAGAAGAAGAAGAATTATTATTGCGTGTTGGAAGAAACCAAGAAGCTGAAATATACCAAAATAACACGCATCCTTCACATTCTTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA

Coding sequence (CDS)

ATGGCAGTAATCCCAAGATGGCTTGAATCTTTACTTTCAACAACATTTTTCTATGCTTGTCCTTCACATAAAGAAGCTCCAAGAAGTGAATGCAATATGTTTTGCCTTGATTGCTACCATCCCTCTTTTTGCTTCTATTGTCGATCCAACAAACACCATGATCATCATGTCATTCAGATTCGGAGGTCTTCGTACCATGACGTGGTGAGAGTGGCCGAGATAGAGAAAGTTTTGGATATAAGTGAAGTTCAAACTTACGTGATAAATAGTGCAAGAGTTTTGTTTCTAAATGAGAGGCCTCAACCGAAGAGCTCTACAAGTAAAGGAGGCTCTCATATGTGTGAGATTTGTAGTAGAAGTCTCTTGGATCCGTTTCGTTTTTGCTCTCTTGGTTGTAAGGTCATCGCGATAAAGACGTACGACGATTTGAGCTTTTACTCGAGAGGAAAGAAGAATGAGGAAGTTTTGGGAAGAAGGGAAAGAATAGGAAGAAGATTGGGATCGGAGGAAGAGGAGGAAGAAGAAGAAGAATTATTATTGCGTGTTGGAAGAAACCAAGAAGCTGAAATATACCAAAATAACACGCATCCTTCACATTCTTCTAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA

Protein sequence

MAVIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRRSSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLLDPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELLLRVGRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAPF

Homology

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BLAST of ClCG01G013970 vs. TrEMBL
Match: A0A0A0LY15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G136780 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.7e-94
Identity = 182/219 (83.11%), Postives = 189/219 (86.30%), Query Frame = 1


Query: 1   MAVIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPS-FCFYCRSNKHHDHHVIQ 60
           M  IPRWLE LLSTTFF ACPSHK+APRSECNMFCLDC H S FCFYCRSNKHH HHVIQ
Sbjct: 1   MGAIPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQ 60

Query: 61  IRRSSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSR 120
           IRRSSYHDVVRVAEIE VLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSH+CEIC+R
Sbjct: 61  IRRSSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICTR 120

Query: 121 SLLDPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELL 180
           SLLDPFRFCSLGCKVI IKT  D  FY RGK NEEVL      GRRLGS+EE+EEEEE  
Sbjct: 121 SLLDPFRFCSLGCKVIGIKTNMDSGFYLRGKNNEEVL------GRRLGSKEEDEEEEE-G 180

Query: 181 LRVGRN---QEAEIYQNNTHPSHSSNSRRRKGIPQRAPF 216
           LRVGRN   +E EIYQN+TH SH SNSRRRKGIPQRAPF
Sbjct: 181 LRVGRNEEEEEGEIYQNHTHSSH-SNSRRRKGIPQRAPF 211

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BLAST of ClCG01G013970 vs. TrEMBL
Match: B9GEV1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s21990g PE=4 SV=2)

HSP 1 Score: 286.6 bits (732), Expect = 2.5e-74
Identity = 147/213 (69.01%), Postives = 166/213 (77.93%), Query Frame = 1


Query: 3   VIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRR 62
           ++P WLESLLST FF  CP H++APRSECNMFCLDC   +FCFYCRS +H DH VIQIRR
Sbjct: 4   LVPPWLESLLSTAFFTVCPRHRDAPRSECNMFCLDCNTEAFCFYCRSTRHKDHSVIQIRR 63

Query: 63  SSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLL 122
           SSYHDVVRVAEI+KVLDI+ VQTYVINSARVLFLNERPQPKSSTSKG  H+CEIC RSLL
Sbjct: 64  SSYHDVVRVAEIQKVLDITGVQTYVINSARVLFLNERPQPKSSTSKGVPHLCEICGRSLL 123

Query: 123 DPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELLLRV 182
           DPFRFCSLGCK++ IK   D +F +   K+EEV   RE +GRRL S+EEEE      LR 
Sbjct: 124 DPFRFCSLGCKLVRIKNNGDATF-NLSTKDEEVGEMREGMGRRLPSKEEEE------LRE 183

Query: 183 GRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAPF 216
           G  Q  ++Y +   P H SNSRRRKGIP RAPF
Sbjct: 184 GSQQ--DMYTSTLTPPH-SNSRRRKGIPHRAPF 206

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BLAST of ClCG01G013970 vs. TrEMBL
Match: B9SCM5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0475810 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.2e-73
Identity = 147/214 (68.69%), Postives = 167/214 (78.04%), Query Frame = 1


Query: 3   VIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRR 62
           +IP WLESLLST+FF  CP H+++ RSECNMFCLDC + +FCF CRS+KH +H V+QIRR
Sbjct: 2   LIPPWLESLLSTSFFTICPRHQDSARSECNMFCLDCKNGAFCFCCRSSKHKEHSVLQIRR 61

Query: 63  SSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKG-GSHMCEICSRSL 122
           SSYHDVVRVAEI+ VLDIS VQTYVINSAR+LFLNERPQPK+STSKG  SH+CEIC RSL
Sbjct: 62  SSYHDVVRVAEIQNVLDISGVQTYVINSARILFLNERPQPKTSTSKGVSSHLCEICGRSL 121

Query: 123 LDPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERI-GRRLGSEEEEEEEEELLL 182
           LDPFRFCSLGCK++ IK   D  F +   K EE+  RRE I GRRL S+EEEEEEE   L
Sbjct: 122 LDPFRFCSLGCKIVGIKKNRDAHF-NLSTKKEEIEQRREGIMGRRLASKEEEEEEE---L 181

Query: 183 RVGRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAP 215
           RVG  QE         P H+SNSRRRKGIP RAP
Sbjct: 182 RVGSQQEMYRSTPLPPPPHNSNSRRRKGIPHRAP 211

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BLAST of ClCG01G013970 vs. TrEMBL
Match: A0A067FAU2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028583mg PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.1e-72
Identity = 139/213 (65.26%), Postives = 164/213 (77.00%), Query Frame = 1


Query: 3   VIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRR 62
           ++P WLESLLST+FF  CP H ++PR+ECNM+CLDC   +FCFYCRS++H DH VIQIRR
Sbjct: 2   LVPPWLESLLSTSFFTICPRHNDSPRNECNMYCLDCMSGAFCFYCRSSRHKDHPVIQIRR 61

Query: 63  SSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLL 122
           SSYHDVVRVAEI+K LDISEVQTYVINSARVLFLNERPQPK    KG SH+CEIC RSLL
Sbjct: 62  SSYHDVVRVAEIQKALDISEVQTYVINSARVLFLNERPQPKGPVGKGVSHLCEICGRSLL 121

Query: 123 DPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELLLRV 182
           DPFRFCSLGCK+  IK   + SF    K  EE+   RE + RRL ++E+EE      LR 
Sbjct: 122 DPFRFCSLGCKLEGIKKNGEASFVLSNKNEEEIPQEREGMQRRLPTKEKEE------LRE 181

Query: 183 GRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAPF 216
           GR Q  +++++   P+H SNSRRRKGIPQRAPF
Sbjct: 182 GRQQ--DMHRSTPPPTH-SNSRRRKGIPQRAPF 205

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BLAST of ClCG01G013970 vs. TrEMBL
Match: V4SB13_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030107mg PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.3e-72
Identity = 139/213 (65.26%), Postives = 165/213 (77.46%), Query Frame = 1


Query: 3   VIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRR 62
           ++P WLESLLST+FF  CP H ++PR+ECNM+CLDC   +FCFYCRS++H DH VIQIRR
Sbjct: 2   LVPPWLESLLSTSFFTICPRHNDSPRNECNMYCLDCMSGAFCFYCRSSRHKDHPVIQIRR 61

Query: 63  SSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLL 122
           SSYH+VVRVAEI+KVLDISEVQTYVINSARVLFLNERPQPK    KG SH+CEIC RSLL
Sbjct: 62  SSYHNVVRVAEIQKVLDISEVQTYVINSARVLFLNERPQPKGPVGKGVSHLCEICGRSLL 121

Query: 123 DPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELLLRV 182
           DPFRFCSLGCK+  IK   + SF    K  EE+   RE + RRL ++E+EE      LR 
Sbjct: 122 DPFRFCSLGCKLEGIKKNGEASFVLSNKNEEEIPQEREGMQRRLPTKEKEE------LRE 181

Query: 183 GRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAPF 216
           GR Q  +++++   P+H SNSRRRKGIPQRAPF
Sbjct: 182 GRQQ--DMHRSTPPPTH-SNSRRRKGIPQRAPF 205

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BLAST of ClCG01G013970 vs. TAIR10
Match: AT2G27930.1 (AT2G27930.1 PLATZ transcription factor family protein)

HSP 1 Score: 232.3 bits (591), Expect = 2.9e-61
Identity = 122/218 (55.96%), Postives = 139/218 (63.76%), Query Frame = 1


Query: 5   PRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRRSS 64
           P+WLE LL T FF  CP H+E PR+ECNMFCL C + +FCFYCRS+ H DH V+QIRRSS
Sbjct: 4   PKWLEGLLRTNFFSICPRHRETPRNECNMFCLSCQNAAFCFYCRSSFHIDHPVLQIRRSS 63

Query: 65  YHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPK-------SSTSKGGSHMCEIC 124
           YHDVVRV+EIE  LDI  VQTYVINSARVLFLNERPQPK       SST K  S+ CE C
Sbjct: 64  YHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMSYFCETC 123

Query: 125 SRSLLDPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEE 184
            R+LLDPFRFCSLGCKV                            G R   EEEEE    
Sbjct: 124 CRTLLDPFRFCSLGCKV---------------------------EGMRKNKEEEEE---- 183

Query: 185 LLLRVGRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAPF 216
              R+ + ++ E ++    P+H+SNSRRRKGIP RAPF
Sbjct: 184 ---RLRKERQQETHKGTHPPTHTSNSRRRKGIPHRAPF 187

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BLAST of ClCG01G013970 vs. TAIR10
Match: AT1G76590.1 (AT1G76590.1 PLATZ transcription factor family protein)

HSP 1 Score: 185.3 bits (469), Expect = 4.0e-47
Identity = 106/231 (45.89%), Postives = 131/231 (56.71%), Query Frame = 1


Query: 5   PRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRRSS 64
           P WL  +L   +F  C  H  + +SECNMFCLDC   +FC YC  N H +H V+QIRRSS
Sbjct: 18  PPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYCLLN-HRNHRVLQIRRSS 77

Query: 65  YHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLLDP 124
           YH+VVRV EI+K +DIS VQTY+INSAR++FLNERPQP+    KG ++ CEIC RSLLD 
Sbjct: 78  YHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPR--IGKGVTNTCEICCRSLLDS 137

Query: 125 FRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEE-EEEELLLRVG 184
           FRFCSLGCK+  +K    L+F  RGK   E  G  E       ++  +      L+  + 
Sbjct: 138 FRFCSLGCKLGGMKRDPSLTFSLRGKHGREYEGEWESDEATTPTKIRKTCAFNRLMSGLS 197

Query: 185 RNQEAEIYQNNTHPSHSS-------------------NSRRRKGIPQRAPF 216
            +     Y +   PS SS                   NS RRKG+P RAPF
Sbjct: 198 ISTVKCDYLSGDQPSSSSGDESGFKLSPGTPPIYNHRNSSRRKGVPHRAPF 245

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BLAST of ClCG01G013970 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-45
Identity = 101/216 (46.76%), Postives = 127/216 (58.80%), Query Frame = 1


Query: 5   PRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRRSS 64
           P WL+ LL   FF  C  H ++ +SECNM+CLDC +   C  C S  H DHH IQIRRSS
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSF-HKDHHAIQIRRSS 71

Query: 65  YHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLLDP 124
           YHDV+RV+EI+K LDI+ VQTYVINSA+V+FLNERPQP+    KG  + CE+C RSL+D 
Sbjct: 72  YHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPR--PGKGVINTCEVCYRSLVDS 131

Query: 125 FRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELLLRVGR 184
           FRFCSLGCK+  I            KK +E             S+ ++      + R+ +
Sbjct: 132 FRFCSLGCKISGISK----------KKRKEWTNNL--------SDSDDSYSSTSIGRLKK 191

Query: 185 NQEA--EIYQNNTHPSHSSNSR---RRKGIPQRAPF 216
           N +     +  +T P  + N R   RRKGIP RAPF
Sbjct: 192 NDDIMNNSFTPSTPPLSAVNRRIAKRRKGIPHRAPF 206

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BLAST of ClCG01G013970 vs. TAIR10
Match: AT1G21000.1 (AT1G21000.1 PLATZ transcription factor family protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-45
Identity = 103/234 (44.02%), Postives = 134/234 (57.26%), Query Frame = 1


Query: 5   PRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRRSS 64
           P WL  +L  ++F  C  H ++ ++ECN+FCLDC   +FC YC   KH DH V+QIRRSS
Sbjct: 16  PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLV-KHKDHRVVQIRRSS 75

Query: 65  YHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLLDP 124
           YH+VVRV EI+K +DI+ VQTY+INSA+++FLNERPQP+    KG ++ CEIC RSLLD 
Sbjct: 76  YHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPR--IGKGVTNTCEICCRSLLDS 135

Query: 125 FRFCSLGCKVIAIKTYD-DLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELL---L 184
           FRFCSLGCK+  ++  D  L+F  +GK   E LG  E       ++  +      L   L
Sbjct: 136 FRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRLMSGL 195

Query: 185 RVGRNQEAEIYQNNTHPSHSS-------------------NSRRRKGIPQRAPF 216
            +   +  +   N    S SS                   NS RRKG+P RAPF
Sbjct: 196 SISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPPIYNHRNSSRRKGVPHRAPF 246

[Close]

BLAST of ClCG01G013970 vs. TAIR10
Match: AT1G43000.1 (AT1G43000.1 PLATZ transcription factor family protein)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-42
Identity = 96/215 (44.65%), Postives = 127/215 (59.07%), Query Frame = 1


Query: 5   PRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRRSS 64
           P WL  +L   +F  C  H ++ +SECN+FCLDC   +FC  C ++ H  H VIQIRRSS
Sbjct: 9   PPWLTPMLRADYFVTCSIHSQSSKSECNLFCLDCSGNAFCSSCLAH-HRTHRVIQIRRSS 68

Query: 65  YHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLLDP 124
           YH+VVRV+EI+K +DIS +QTYVINSA++ FLN RPQ +  T K  +  C+ICSR+LLD 
Sbjct: 69  YHNVVRVSEIQKHIDISCIQTYVINSAKIFFLNARPQCR--TGKSLNKTCQICSRNLLDS 128

Query: 125 FRFCSLGCKVIAIKTYDD--LSFYSRGKKNEEVLGRRERIGRRL--GSEEEEEEEEELLL 184
           F FCSL CK+  +K  +D  L+ +  GK ++        I  RL  G     +++     
Sbjct: 129 FLFCSLACKLEGVKNGEDPNLTLFHSGKSDDSSKIINTGICSRLIDGISIAVDDQRSETA 188

Query: 185 RVGRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAPF 216
            V   +   I  +  +P  S    RRKGIPQRAPF
Sbjct: 189 GVLSPETPSIESHRNYPMKS----RRKGIPQRAPF 216

[Close]

BLAST of ClCG01G013970 vs. NCBI nr
Match: gi|449443596|ref|XP_004139563.1| (PREDICTED: uncharacterized protein LOC101204359 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 2.4e-94
Identity = 182/219 (83.11%), Postives = 189/219 (86.30%), Query Frame = 1


Query: 1   MAVIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPS-FCFYCRSNKHHDHHVIQ 60
           M  IPRWLE LLSTTFF ACPSHK+APRSECNMFCLDC H S FCFYCRSNKHH HHVIQ
Sbjct: 1   MGAIPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQ 60

Query: 61  IRRSSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSR 120
           IRRSSYHDVVRVAEIE VLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSH+CEIC+R
Sbjct: 61  IRRSSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICTR 120

Query: 121 SLLDPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELL 180
           SLLDPFRFCSLGCKVI IKT  D  FY RGK NEEVL      GRRLGS+EE+EEEEE  
Sbjct: 121 SLLDPFRFCSLGCKVIGIKTNMDSGFYLRGKNNEEVL------GRRLGSKEEDEEEEE-G 180

Query: 181 LRVGRN---QEAEIYQNNTHPSHSSNSRRRKGIPQRAPF 216
           LRVGRN   +E EIYQN+TH SH SNSRRRKGIPQRAPF
Sbjct: 181 LRVGRNEEEEEGEIYQNHTHSSH-SNSRRRKGIPQRAPF 211

[Close]

BLAST of ClCG01G013970 vs. NCBI nr
Match: gi|659071867|ref|XP_008462300.1| (PREDICTED: uncharacterized protein LOC103500687 [Cucumis melo])

HSP 1 Score: 350.5 bits (898), Expect = 2.1e-93
Identity = 180/219 (82.19%), Postives = 190/219 (86.76%), Query Frame = 1


Query: 1   MAVIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPS-FCFYCRSNKHHDHHVIQ 60
           M  IPRWLE LLSTTFF ACPSHK+APRSECNMFCLDC H S FCFYCRSNKHH HHVIQ
Sbjct: 11  MGAIPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQ 70

Query: 61  IRRSSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSR 120
           IRRSSYHDVVRVAEIE VLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSH+CEICSR
Sbjct: 71  IRRSSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICSR 130

Query: 121 SLLDPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGS--EEEEEEEEE 180
           SLLDPFRFCSLGCKVI +KT ++  FYSRGK NEEV      +GRRLGS  E+EEEEE+E
Sbjct: 131 SLLDPFRFCSLGCKVIGLKTNNNSRFYSRGKNNEEV------VGRRLGSKEEDEEEEEDE 190

Query: 181 LLLRVGRN-QEAEIYQNNTHPSHSSNSRRRKGIPQRAPF 216
             LRVGRN +E EIYQN+T  SH SNSRRRKGIPQRAPF
Sbjct: 191 EGLRVGRNEEEGEIYQNHTLSSH-SNSRRRKGIPQRAPF 222

[Close]

BLAST of ClCG01G013970 vs. NCBI nr
Match: gi|566150274|ref|XP_002298164.2| (hypothetical protein POPTR_0001s21990g [Populus trichocarpa])

HSP 1 Score: 286.6 bits (732), Expect = 3.7e-74
Identity = 147/213 (69.01%), Postives = 166/213 (77.93%), Query Frame = 1


Query: 3   VIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRR 62
           ++P WLESLLST FF  CP H++APRSECNMFCLDC   +FCFYCRS +H DH VIQIRR
Sbjct: 4   LVPPWLESLLSTAFFTVCPRHRDAPRSECNMFCLDCNTEAFCFYCRSTRHKDHSVIQIRR 63

Query: 63  SSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHMCEICSRSLL 122
           SSYHDVVRVAEI+KVLDI+ VQTYVINSARVLFLNERPQPKSSTSKG  H+CEIC RSLL
Sbjct: 64  SSYHDVVRVAEIQKVLDITGVQTYVINSARVLFLNERPQPKSSTSKGVPHLCEICGRSLL 123

Query: 123 DPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERIGRRLGSEEEEEEEEELLLRV 182
           DPFRFCSLGCK++ IK   D +F +   K+EEV   RE +GRRL S+EEEE      LR 
Sbjct: 124 DPFRFCSLGCKLVRIKNNGDATF-NLSTKDEEVGEMREGMGRRLPSKEEEE------LRE 183

Query: 183 GRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAPF 216
           G  Q  ++Y +   P H SNSRRRKGIP RAPF
Sbjct: 184 GSQQ--DMYTSTLTPPH-SNSRRRKGIPHRAPF 206

[Close]

BLAST of ClCG01G013970 vs. NCBI nr
Match: gi|223537048|gb|EEF38684.1| (protein with unknown function [Ricinus communis])

HSP 1 Score: 283.5 bits (724), Expect = 3.1e-73
Identity = 147/214 (68.69%), Postives = 167/214 (78.04%), Query Frame = 1


Query: 3   VIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRR 62
           +IP WLESLLST+FF  CP H+++ RSECNMFCLDC + +FCF CRS+KH +H V+QIRR
Sbjct: 2   LIPPWLESLLSTSFFTICPRHQDSARSECNMFCLDCKNGAFCFCCRSSKHKEHSVLQIRR 61

Query: 63  SSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKG-GSHMCEICSRSL 122
           SSYHDVVRVAEI+ VLDIS VQTYVINSAR+LFLNERPQPK+STSKG  SH+CEIC RSL
Sbjct: 62  SSYHDVVRVAEIQNVLDISGVQTYVINSARILFLNERPQPKTSTSKGVSSHLCEICGRSL 121

Query: 123 LDPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERI-GRRLGSEEEEEEEEELLL 182
           LDPFRFCSLGCK++ IK   D  F +   K EE+  RRE I GRRL S+EEEEEEE   L
Sbjct: 122 LDPFRFCSLGCKIVGIKKNRDAHF-NLSTKKEEIEQRREGIMGRRLASKEEEEEEE---L 181

Query: 183 RVGRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAP 215
           RVG  QE         P H+SNSRRRKGIP RAP
Sbjct: 182 RVGSQQEMYRSTPLPPPPHNSNSRRRKGIPHRAP 211

[Close]

BLAST of ClCG01G013970 vs. NCBI nr
Match: gi|1000956176|ref|XP_002523744.2| (PREDICTED: uncharacterized protein LOC8275263 [Ricinus communis])

HSP 1 Score: 283.5 bits (724), Expect = 3.1e-73
Identity = 147/214 (68.69%), Postives = 167/214 (78.04%), Query Frame = 1


Query: 3   VIPRWLESLLSTTFFYACPSHKEAPRSECNMFCLDCYHPSFCFYCRSNKHHDHHVIQIRR 62
           +IP WLESLLST+FF  CP H+++ RSECNMFCLDC + +FCF CRS+KH +H V+QIRR
Sbjct: 5   LIPPWLESLLSTSFFTICPRHQDSARSECNMFCLDCKNGAFCFCCRSSKHKEHSVLQIRR 64

Query: 63  SSYHDVVRVAEIEKVLDISEVQTYVINSARVLFLNERPQPKSSTSKG-GSHMCEICSRSL 122
           SSYHDVVRVAEI+ VLDIS VQTYVINSAR+LFLNERPQPK+STSKG  SH+CEIC RSL
Sbjct: 65  SSYHDVVRVAEIQNVLDISGVQTYVINSARILFLNERPQPKTSTSKGVSSHLCEICGRSL 124

Query: 123 LDPFRFCSLGCKVIAIKTYDDLSFYSRGKKNEEVLGRRERI-GRRLGSEEEEEEEEELLL 182
           LDPFRFCSLGCK++ IK   D  F +   K EE+  RRE I GRRL S+EEEEEEE   L
Sbjct: 125 LDPFRFCSLGCKIVGIKKNRDAHF-NLSTKKEEIEQRREGIMGRRLASKEEEEEEE---L 184

Query: 183 RVGRNQEAEIYQNNTHPSHSSNSRRRKGIPQRAP 215
           RVG  QE         P H+SNSRRRKGIP RAP
Sbjct: 185 RVGSQQEMYRSTPLPPPPHNSNSRRRKGIPHRAP 214

The following BLAST results are available for this feature:

BLAST of ClCG01G013970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY15_CUCSA	1.7e-94	83.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G136780 PE=4 SV=1	[more]
B9GEV1_POPTR	2.5e-74	69.01	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s21990g PE=4 SV=2	[more]
B9SCM5_RICCO	2.2e-73	68.69	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0475810 PE=4 SV=1	[more]
A0A067FAU2_CITSI	4.1e-72	65.26	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028583mg PE=4 SV=1	[more]
V4SB13_9ROSI	5.3e-72	65.26	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030107mg PE=4 SV=1	[more]

BLAST of ClCG01G013970 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27930.1	2.9e-61	55.96	PLATZ transcription factor family protein	[more]
AT1G76590.1	4.0e-47	45.89	PLATZ transcription factor family protein	[more]
AT1G32700.1	1.7e-45	46.76	PLATZ transcription factor family protein	[more]
AT1G21000.1	2.2e-45	44.02	PLATZ transcription factor family protein	[more]
AT1G43000.1	1.3e-42	44.65	PLATZ transcription factor family protein	[more]

BLAST of ClCG01G013970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443596\|ref\|XP_004139563.1\|	2.4e-94	83.11	PREDICTED: uncharacterized protein LOC101204359 [Cucumis sativus]	[more]
gi\|659071867\|ref\|XP_008462300.1\|	2.1e-93	82.19	PREDICTED: uncharacterized protein LOC103500687 [Cucumis melo]	[more]
gi\|566150274\|ref\|XP_002298164.2\|	3.7e-74	69.01	hypothetical protein POPTR_0001s21990g [Populus trichocarpa]	[more]
gi\|223537048\|gb\|EEF38684.1\|	3.1e-73	68.69	protein with unknown function [Ricinus communis]	[more]
gi\|1000956176\|ref\|XP_002523744.2\|	3.1e-73	68.69	PREDICTED: uncharacterized protein LOC8275263 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006734	DUF597

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G013970.1	ClCG01G013970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 61..134 score: 6.8
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 1..215 score: 1.3
None	No IPR available	PANTHER	PTHR31065:SF4	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..215 score: 1.3
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..20 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G013970	Csa1G136780	Cucumber (Chinese Long) v2	cuwcgB014
ClCG01G013970	MELO3C004845	Melon (DHL92) v3.5.1	mewcgB131
ClCG01G013970	Cla001054	Watermelon (97103) v1	wcgwmB150
ClCG01G013970	Cla97C01G012940	Watermelon (97103) v2	wcgwmbB089
ClCG01G013970	Bhi08G000106	Wax gourd	wcgwgoB243
ClCG01G013970	CSPI01G14080	Wild cucumber (PI 183967)	cpiwcgB017
ClCG01G013970	Cucsa.200310	Cucumber (Gy14) v1	cgywcgB371
ClCG01G013970	CmaCh12G008080	Cucurbita maxima (Rimu)	cmawcgB154
ClCG01G013970	CmoCh12G008180	Cucurbita moschata (Rifu)	cmowcgB142
ClCG01G013970	Cp4.1LG07g06760	Cucurbita pepo (Zucchini)	cpewcgB727
ClCG01G013970	CsGy1G014060	Cucumber (Gy14) v2	cgybwcgB014
ClCG01G013970	MELO3C004845.2	Melon (DHL92) v3.6.1	medwcgB127
ClCG01G013970	CsaV3_1G014280	Cucumber (Chinese Long) v3	cucwcgB016

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G013970	Cucurbita pepo (Zucchini)	cpewcgB455
ClCG01G013970	Bottle gourd (USVL1VR-Ls)	lsiwcgB230
ClCG01G013970	Silver-seed gourd	carwcgB0160
ClCG01G013970	Cucurbita maxima (Rimu)	cmawcgB181
ClCG01G013970	Cucurbita moschata (Rifu)	cmowcgB172
ClCG01G013970	Watermelon (97103) v1	wcgwmB156