CmaCh12G008080 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G008080
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	PLATZ transcription factor family protein
Location	Cma_Chr12 : 5861464 .. 5862666 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGGCAATGAAGCAATGCTTATAAAACCCAATTTTCTTGGGATTGTTTGGGATTTTCTCGGGAACCAAACAGAAAACAAAAGAAACCATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTACGCGTGTCCTTTGCATAAAGACGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCATTGCGCGTTCTGCTTCTATTGCCGATCTGACCTACACCACGATCACCGTGTTATTCAGGTCGGTTTTCCTTATCATAATCGAACATGATCCTCTATTTCACAATGTGGGTATCAATTTTATCCTCTTGAATTTGTAATTCGTGTAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCAAGAGTTTTGTTTTTGAATGAGAGGCCTCAACCGAAGAGCTCTGCTAGTAAAGGAGGCTCCCATGTGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGTTCTCTTGGTTGCAAGGTAAATTTCTTTAGCTTCAAATTGAACTATGCTCGAGTTGATATTTTATGTATTATTTTAAATTTTACTGATAAAATGACGATATGGTAATGTCAAAATGTTAAATTTTTTCTTTATGCTTTAGTTTATGAAACCGACCTATCTAATGATGAAATTGATAATTTACCTACTTTATAATATGACCTAATATAGCATTATAACTTACCTAACCTTGAGTGGGTCCGTGCTATTATGGAAAATAATAATGTAACTACAGGTATTAACCGACCATCTCTTCTTCTTTATAAGCTTTCGACGAAAGTACTCTTTTCCATAAGTTGCAAACCTACTCGAGCGTAGTTCACTTTGAATCTCTCTTTTGGGTTTTATACTTTCAAATCAAGTGCCGTTTTCGTAAGTGATTTAGGTCAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAGGAAGAGGAGGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAAATTTACCAAAATCACACGCATCCTTCACATTCAAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA

mRNA sequence

TATGGCAATGAAGCAATGCTTATAAAACCCAATTTTCTTGGGATTGTTTGGGATTTTCTCGGGAACCAAACAGAAAACAAAAGAAACCATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTACGCGTGTCCTTTGCATAAAGACGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCATTGCGCGTTCTGCTTCTATTGCCGATCTGACCTACACCACGATCACCGTGTTATTCAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCAAGAGTTTTGTTTTTGAATGAGAGGCCTCAACCGAAGAGCTCTGCTAGTAAAGGAGGCTCCCATGTGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGTTCTCTTGGTTGCAAGGTCAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAGGAAGAGGAGGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAAATTTACCAAAATCACACGCATCCTTCACATTCAAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA

Coding sequence (CDS)

ATGGTAATCCCAACATGGCTCGAATCTTTACTATCCACGCCGTTTTTCTACGCGTGTCCTTTGCATAAAGACGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCATTGCGCGTTCTGCTTCTATTGCCGATCTGACCTACACCACGATCACCGTGTTATTCAGATTCGGAGATCATCGTACCATGACGTGGTAAGAGTGGCGGAGATCGAGAAAGTTTTGGATATAAGTGAAATCCAAACATATGTGATAAACAGCGCAAGAGTTTTGTTTTTGAATGAGAGGCCTCAACCGAAGAGCTCTGCTAGTAAAGGAGGCTCCCATGTGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGTTCTCTTGGTTGCAAGGTCAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAGGAAGAGGAGGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAAATTTACCAAAATCACACGCATCCTTCACATTCAAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA

Protein sequence

MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIRRSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCLLDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRRNQEGEIYQNHTHPSHSNSRRRKGIPQRAPF

Homology

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BLAST of CmaCh12G008080 vs. TrEMBL
Match: A0A0A0LY15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G136780 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.0e-80
Identity = 165/214 (77.10%), Postives = 174/214 (81.31%), Query Frame = 1


Query: 3   IPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCA-FCFYCRSDLHHDHRVIQIRR 62
           IP WLE LLST FF ACP HK APRSECNMFCLDC H + FCFYCRS+ HH H VIQIRR
Sbjct: 4   IPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQIRR 63

Query: 63  SSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCLL 122
           SSYHDVVRVAEIE VLDISE+QTYVINSARVLFLNERPQPKSS SKGGSHVCEIC+R LL
Sbjct: 64  SSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICTRSLL 123

Query: 123 DPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLG--EEEEEEEEELRVR 182
           DPFRFCSLGCKV     N DS FY   + +EEV      +GRRLG  EE+EEEEE LRV 
Sbjct: 124 DPFRFCSLGCKVIGIKTNMDSGFYLRGKNNEEV------LGRRLGSKEEDEEEEEGLRVG 183

Query: 183 RN---QEGEIYQNHTHPSHSNSRRRKGIPQRAPF 207
           RN   +EGEIYQNHTH SHSNSRRRKGIPQRAPF
Sbjct: 184 RNEEEEEGEIYQNHTHSSHSNSRRRKGIPQRAPF 211

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BLAST of CmaCh12G008080 vs. TrEMBL
Match: B9GEV1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s21990g PE=4 SV=2)

HSP 1 Score: 268.5 bits (685), Expect = 6.9e-69
Identity = 141/209 (67.46%), Postives = 158/209 (75.60%), Query Frame = 1


Query: 1   MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIR 60
           M++P WLESLLST FF  CP H+DAPRSECNMFCLDC+  AFCFYCRS  H DH VIQIR
Sbjct: 3   MLVPPWLESLLSTAFFTVCPRHRDAPRSECNMFCLDCNTEAFCFYCRSTRHKDHSVIQIR 62

Query: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCL 120
           RSSYHDVVRVAEI+KVLDI+ +QTYVINSARVLFLNERPQPKSS SKG  H+CEIC R L
Sbjct: 63  RSSYHDVVRVAEIQKVLDITGVQTYVINSARVLFLNERPQPKSSTSKGVPHLCEICGRSL 122

Query: 121 LDPFRFCSLGCK---VKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRRN 180
           LDPFRFCSLGCK   +KN     +    K EEV   RE +GRRL  +EEEE     +R  
Sbjct: 123 LDPFRFCSLGCKLVRIKNNGDATFNLSTKDEEVGEMREGMGRRLPSKEEEE-----LREG 182

Query: 181 QEGEIYQNHTHPSHSNSRRRKGIPQRAPF 207
            + ++Y +   P HSNSRRRKGIP RAPF
Sbjct: 183 SQQDMYTSTLTPPHSNSRRRKGIPHRAPF 206

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BLAST of CmaCh12G008080 vs. TrEMBL
Match: A0A067FAU2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028583mg PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 4.9e-67
Identity = 134/210 (63.81%), Postives = 162/210 (77.14%), Query Frame = 1


Query: 1   MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIR 60
           M++P WLESLLST FF  CP H D+PR+ECNM+CLDC   AFCFYCRS  H DH VIQIR
Sbjct: 1   MLVPPWLESLLSTSFFTICPRHNDSPRNECNMYCLDCMSGAFCFYCRSSRHKDHPVIQIR 60

Query: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCL 120
           RSSYHDVVRVAEI+K LDISE+QTYVINSARVLFLNERPQPK    KG SH+CEIC R L
Sbjct: 61  RSSYHDVVRVAEIQKALDISEVQTYVINSARVLFLNERPQPKGPVGKGVSHLCEICGRSL 120

Query: 121 LDPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRR 180
           LDPFRFCSLGCK+    KN +++F  + +  EE+ + RE + RRL  +E+EE     +R 
Sbjct: 121 LDPFRFCSLGCKLEGIKKNGEASFVLSNKNEEEIPQEREGMQRRLPTKEKEE-----LRE 180

Query: 181 NQEGEIYQNHTHPSHSNSRRRKGIPQRAPF 207
            ++ +++++   P+HSNSRRRKGIPQRAPF
Sbjct: 181 GRQQDMHRSTPPPTHSNSRRRKGIPQRAPF 205

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BLAST of CmaCh12G008080 vs. TrEMBL
Match: V4SB13_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030107mg PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.4e-67
Identity = 134/210 (63.81%), Postives = 163/210 (77.62%), Query Frame = 1


Query: 1   MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIR 60
           M++P WLESLLST FF  CP H D+PR+ECNM+CLDC   AFCFYCRS  H DH VIQIR
Sbjct: 1   MLVPPWLESLLSTSFFTICPRHNDSPRNECNMYCLDCMSGAFCFYCRSSRHKDHPVIQIR 60

Query: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCL 120
           RSSYH+VVRVAEI+KVLDISE+QTYVINSARVLFLNERPQPK    KG SH+CEIC R L
Sbjct: 61  RSSYHNVVRVAEIQKVLDISEVQTYVINSARVLFLNERPQPKGPVGKGVSHLCEICGRSL 120

Query: 121 LDPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRR 180
           LDPFRFCSLGCK+    KN +++F  + +  EE+ + RE + RRL  +E+EE     +R 
Sbjct: 121 LDPFRFCSLGCKLEGIKKNGEASFVLSNKNEEEIPQEREGMQRRLPTKEKEE-----LRE 180

Query: 181 NQEGEIYQNHTHPSHSNSRRRKGIPQRAPF 207
            ++ +++++   P+HSNSRRRKGIPQRAPF
Sbjct: 181 GRQQDMHRSTPPPTHSNSRRRKGIPQRAPF 205

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BLAST of CmaCh12G008080 vs. TrEMBL
Match: B9SCM5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0475810 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-65
Identity = 144/214 (67.29%), Postives = 167/214 (78.04%), Query Frame = 1


Query: 1   MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIR 60
           M+IP WLESLLST FF  CP H+D+ RSECNMFCLDC + AFCF CRS  H +H V+QIR
Sbjct: 1   MLIPPWLESLLSTSFFTICPRHQDSARSECNMFCLDCKNGAFCFCCRSSKHKEHSVLQIR 60

Query: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKG-GSHVCEICSRC 120
           RSSYHDVVRVAEI+ VLDIS +QTYVINSAR+LFLNERPQPK+S SKG  SH+CEIC R 
Sbjct: 61  RSSYHDVVRVAEIQNVLDISGVQTYVINSARILFLNERPQPKTSTSKGVSSHLCEICGRS 120

Query: 121 LLDPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERI-GRRLGEEEEEEEEELRV 180
           LLDPFRFCSLGCK+    KN D++F  + +K EE+ +RRE I GRRL  +EEEEEEELRV
Sbjct: 121 LLDPFRFCSLGCKIVGIKKNRDAHFNLSTKK-EEIEQRREGIMGRRLASKEEEEEEELRV 180

Query: 181 RRNQEGEIYQN---HTHPSHSNSRRRKGIPQRAP 206
              Q  E+Y++      P +SNSRRRKGIP RAP
Sbjct: 181 GSQQ--EMYRSTPLPPPPHNSNSRRRKGIPHRAP 211

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BLAST of CmaCh12G008080 vs. TAIR10
Match: AT2G27930.1 (AT2G27930.1 PLATZ transcription factor family protein)

HSP 1 Score: 217.6 bits (553), Expect = 7.1e-57
Identity = 121/211 (57.35%), Postives = 138/211 (65.40%), Query Frame = 1


Query: 4   PTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIRRSS 63
           P WLE LL T FF  CP H++ PR+ECNMFCL C + AFCFYCRS  H DH V+QIRRSS
Sbjct: 4   PKWLEGLLRTNFFSICPRHRETPRNECNMFCLSCQNAAFCFYCRSSFHIDHPVLQIRRSS 63

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPK-------SSASKGGSHVCEIC 123
           YHDVVRV+EIE  LDI  +QTYVINSARVLFLNERPQPK       SS  K  S+ CE C
Sbjct: 64  YHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMSYFCETC 123

Query: 124 SRCLLDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRR 183
            R LLDPFRFCSLGCKV+                       G R  +EEEEE    R+R+
Sbjct: 124 CRTLLDPFRFCSLGCKVE-----------------------GMRKNKEEEEE----RLRK 183

Query: 184 NQEGEIYQNHTHPSH-SNSRRRKGIPQRAPF 207
            ++ E ++    P+H SNSRRRKGIP RAPF
Sbjct: 184 ERQQETHKGTHPPTHTSNSRRRKGIPHRAPF 187

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BLAST of CmaCh12G008080 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein)

HSP 1 Score: 164.5 bits (415), Expect = 7.1e-41
Identity = 96/211 (45.50%), Postives = 123/211 (58.29%), Query Frame = 1


Query: 4   PTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIRRSS 63
           P WL+ LL   FF  C LH D+ +SECNM+CLDC +   C  C S  H DH  IQIRRSS
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLS-FHKDHHAIQIRRSS 71

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCLLDP 123
           YHDV+RV+EI+K LDI+ +QTYVINSA+V+FLNERPQP+    KG  + CE+C R L+D 
Sbjct: 72  YHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPR--PGKGVINTCEVCYRSLVDS 131

Query: 124 FRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRRNQEGEIY 183
           FRFCSLGCK+                  ++R+     L + ++        R  +  +I 
Sbjct: 132 FRFCSLGCKISGIS-------------KKKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIM 191

Query: 184 QNHTHPS--------HSNSRRRKGIPQRAPF 207
            N   PS           ++RRKGIP RAPF
Sbjct: 192 NNSFTPSTPPLSAVNRRIAKRRKGIPHRAPF 206

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BLAST of CmaCh12G008080 vs. TAIR10
Match: AT1G21000.1 (AT1G21000.1 PLATZ transcription factor family protein)

HSP 1 Score: 161.4 bits (407), Expect = 6.0e-40
Identity = 102/242 (42.15%), Postives = 137/242 (56.61%), Query Frame = 1


Query: 4   PTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIRRSS 63
           P WL  +L   +F  C +H D+ ++ECN+FCLDC   AFC YC    H DHRV+QIRRSS
Sbjct: 16  PPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVK-HKDHRVVQIRRSS 75

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCLLDP 123
           YH+VVRV EI+K +DI+ +QTY+INSA+++FLNERPQP+    KG ++ CEIC R LLD 
Sbjct: 76  YHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPR--IGKGVTNTCEICCRSLLDS 135

Query: 124 FRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRR--- 183
           FRFCSLGCK+    + + S  +  + KH      RE +G   G E +E     ++R+   
Sbjct: 136 FRFCSLGCKLGGMRRGDLSLTFSLKGKH-----GREYLG---GSESDEATTPTKMRKTNA 195

Query: 184 ------------------------------NQEGEIYQNHTHP--SHSNSRRRKGIPQRA 207
                                         ++ G  +   T P  +H NS RRKG+P RA
Sbjct: 196 FNRLMSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPPIYNHRNSSRRKGVPHRA 246

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BLAST of CmaCh12G008080 vs. TAIR10
Match: AT1G76590.1 (AT1G76590.1 PLATZ transcription factor family protein)

HSP 1 Score: 159.1 bits (401), Expect = 3.0e-39
Identity = 104/239 (43.51%), Postives = 133/239 (55.65%), Query Frame = 1


Query: 4   PTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIRRSS 63
           P WL  +L   +F  C +H  + +SECNMFCLDC   AFC YC  + H +HRV+QIRRSS
Sbjct: 18  PPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYCLLN-HRNHRVLQIRRSS 77

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCLLDP 123
           YH+VVRV EI+K +DIS +QTY+INSAR++FLNERPQP+    KG ++ CEIC R LLD 
Sbjct: 78  YHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPR--IGKGVTNTCEICCRSLLDS 137

Query: 124 FRFCSLGCK---VKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRR---- 183
           FRFCSLGCK   +K + S  +    KH      RE  G     E +E     ++R+    
Sbjct: 138 FRFCSLGCKLGGMKRDPSLTFSLRGKH-----GREYEGE---WESDEATTPTKIRKTCAF 197

Query: 184 ---------------------------NQEGEIYQNHTHP--SHSNSRRRKGIPQRAPF 207
                                      ++ G      T P  +H NS RRKG+P RAPF
Sbjct: 198 NRLMSGLSISTVKCDYLSGDQPSSSSGDESGFKLSPGTPPIYNHRNSSRRKGVPHRAPF 245

[Close]

BLAST of CmaCh12G008080 vs. TAIR10
Match: AT4G17900.1 (AT4G17900.1 PLATZ transcription factor family protein)

HSP 1 Score: 154.8 bits (390), Expect = 5.6e-38
Identity = 96/209 (45.93%), Postives = 124/209 (59.33%), Query Frame = 1


Query: 4   PTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIRRSS 63
           P WL+ LL   FF  C  H D+ +SECNM+CLDC +   C  C +  H DHR IQIRRSS
Sbjct: 34  PPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAH-HKDHRTIQIRRSS 93

Query: 64  YHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCLL-D 123
           YHDV+RV EI+K LDI  IQTYVINSA+V+FLNERPQP+    KG ++ C++C R L+ D
Sbjct: 94  YHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPR--PGKGVTNTCKVCYRSLVDD 153

Query: 124 PFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRRNQEG-E 183
            FRFCSLGCK+                 SR  E+    L  E E+    + + +N    +
Sbjct: 154 SFRFCSLGCKIAG--------------TSRGFEKGRENLLMETEDSSSSIAIGKNITNLQ 213

Query: 184 IYQNHTHPSHSNS-----RRRKGIPQRAP 206
            +   T P  ++S     +RRKGIP R+P
Sbjct: 214 SFSPSTPPLTTSSNCRIVKRRKGIPHRSP 225

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BLAST of CmaCh12G008080 vs. NCBI nr
Match: gi|449443596|ref|XP_004139563.1| (PREDICTED: uncharacterized protein LOC101204359 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 4.3e-80
Identity = 165/214 (77.10%), Postives = 174/214 (81.31%), Query Frame = 1


Query: 3   IPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCA-FCFYCRSDLHHDHRVIQIRR 62
           IP WLE LLST FF ACP HK APRSECNMFCLDC H + FCFYCRS+ HH H VIQIRR
Sbjct: 4   IPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQIRR 63

Query: 63  SSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCLL 122
           SSYHDVVRVAEIE VLDISE+QTYVINSARVLFLNERPQPKSS SKGGSHVCEIC+R LL
Sbjct: 64  SSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICTRSLL 123

Query: 123 DPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLG--EEEEEEEEELRVR 182
           DPFRFCSLGCKV     N DS FY   + +EEV      +GRRLG  EE+EEEEE LRV 
Sbjct: 124 DPFRFCSLGCKVIGIKTNMDSGFYLRGKNNEEV------LGRRLGSKEEDEEEEEGLRVG 183

Query: 183 RN---QEGEIYQNHTHPSHSNSRRRKGIPQRAPF 207
           RN   +EGEIYQNHTH SHSNSRRRKGIPQRAPF
Sbjct: 184 RNEEEEEGEIYQNHTHSSHSNSRRRKGIPQRAPF 211

[Close]

BLAST of CmaCh12G008080 vs. NCBI nr
Match: gi|659071867|ref|XP_008462300.1| (PREDICTED: uncharacterized protein LOC103500687 [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 4.7e-79
Identity = 164/215 (76.28%), Postives = 173/215 (80.47%), Query Frame = 1


Query: 3   IPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCA-FCFYCRSDLHHDHRVIQIRR 62
           IP WLE LLST FF ACP HK APRSECNMFCLDC H + FCFYCRS+ HH H VIQIRR
Sbjct: 14  IPRWLECLLSTTFFNACPSHKQAPRSECNMFCLDCSHSSSFCFYCRSNKHHHHHVIQIRR 73

Query: 63  SSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCLL 122
           SSYHDVVRVAEIE VLDISE+QTYVINSARVLFLNERPQPKSS SKGGSHVCEICSR LL
Sbjct: 74  SSYHDVVRVAEIENVLDISEVQTYVINSARVLFLNERPQPKSSTSKGGSHVCEICSRSLL 133

Query: 123 DPFRFCSLGCKV----KNEDSNFYPNEQKHEEVSRRRERIGRRLG-----EEEEEEEEEL 182
           DPFRFCSLGCKV     N +S FY   + +EEV      +GRRLG     EEEEE+EE L
Sbjct: 134 DPFRFCSLGCKVIGLKTNNNSRFYSRGKNNEEV------VGRRLGSKEEDEEEEEDEEGL 193

Query: 183 RVRRN-QEGEIYQNHTHPSHSNSRRRKGIPQRAPF 207
           RV RN +EGEIYQNHT  SHSNSRRRKGIPQRAPF
Sbjct: 194 RVGRNEEEGEIYQNHTLSSHSNSRRRKGIPQRAPF 222

[Close]

BLAST of CmaCh12G008080 vs. NCBI nr
Match: gi|566150274|ref|XP_002298164.2| (hypothetical protein POPTR_0001s21990g [Populus trichocarpa])

HSP 1 Score: 268.5 bits (685), Expect = 9.9e-69
Identity = 141/209 (67.46%), Postives = 158/209 (75.60%), Query Frame = 1


Query: 1   MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIR 60
           M++P WLESLLST FF  CP H+DAPRSECNMFCLDC+  AFCFYCRS  H DH VIQIR
Sbjct: 3   MLVPPWLESLLSTAFFTVCPRHRDAPRSECNMFCLDCNTEAFCFYCRSTRHKDHSVIQIR 62

Query: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCL 120
           RSSYHDVVRVAEI+KVLDI+ +QTYVINSARVLFLNERPQPKSS SKG  H+CEIC R L
Sbjct: 63  RSSYHDVVRVAEIQKVLDITGVQTYVINSARVLFLNERPQPKSSTSKGVPHLCEICGRSL 122

Query: 121 LDPFRFCSLGCK---VKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRRN 180
           LDPFRFCSLGCK   +KN     +    K EEV   RE +GRRL  +EEEE     +R  
Sbjct: 123 LDPFRFCSLGCKLVRIKNNGDATFNLSTKDEEVGEMREGMGRRLPSKEEEE-----LREG 182

Query: 181 QEGEIYQNHTHPSHSNSRRRKGIPQRAPF 207
            + ++Y +   P HSNSRRRKGIP RAPF
Sbjct: 183 SQQDMYTSTLTPPHSNSRRRKGIPHRAPF 206

[Close]

BLAST of CmaCh12G008080 vs. NCBI nr
Match: gi|743922686|ref|XP_011005417.1| (PREDICTED: uncharacterized protein LOC105111676 isoform X1 [Populus euphratica])

HSP 1 Score: 264.6 bits (675), Expect = 1.4e-67
Identity = 140/209 (66.99%), Postives = 158/209 (75.60%), Query Frame = 1


Query: 1   MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIR 60
           M++P WLESLLST FF  CP H+DAPRSECNMFCLDC+  AFCFYCRS  H DH VIQIR
Sbjct: 4   MLVPPWLESLLSTAFFTICPRHRDAPRSECNMFCLDCNTEAFCFYCRSTRHKDHSVIQIR 63

Query: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCL 120
           RSSYHDVVRVAEI+KVLDI+ +QTYVINSARVLFLNERPQPKSS SKG SH+CEIC R L
Sbjct: 64  RSSYHDVVRVAEIQKVLDITGVQTYVINSARVLFLNERPQPKSSTSKGVSHLCEICGRSL 123

Query: 121 LDPFRFCSLGCK---VKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRRN 180
           LDPFRFCSLGCK   +KN     +    K EE    RE +GRRL  +EEEE     +R  
Sbjct: 124 LDPFRFCSLGCKLVRIKNNGDATFNLSTKDEEGGEIREGMGRRLPSKEEEE-----LREG 183

Query: 181 QEGEIYQNHTHPSHSNSRRRKGIPQRAPF 207
            + +++ +   P HSNSRRRKGIP RAPF
Sbjct: 184 SQQDMHTSTLTPPHSNSRRRKGIPHRAPF 207

[Close]

BLAST of CmaCh12G008080 vs. NCBI nr
Match: gi|743922688|ref|XP_011005418.1| (PREDICTED: uncharacterized protein LOC105111676 isoform X2 [Populus euphratica])

HSP 1 Score: 264.6 bits (675), Expect = 1.4e-67
Identity = 140/209 (66.99%), Postives = 158/209 (75.60%), Query Frame = 1


Query: 1   MVIPTWLESLLSTPFFYACPLHKDAPRSECNMFCLDCHHCAFCFYCRSDLHHDHRVIQIR 60
           M++P WLESLLST FF  CP H+DAPRSECNMFCLDC+  AFCFYCRS  H DH VIQIR
Sbjct: 3   MLVPPWLESLLSTAFFTICPRHRDAPRSECNMFCLDCNTEAFCFYCRSTRHKDHSVIQIR 62

Query: 61  RSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGSHVCEICSRCL 120
           RSSYHDVVRVAEI+KVLDI+ +QTYVINSARVLFLNERPQPKSS SKG SH+CEIC R L
Sbjct: 63  RSSYHDVVRVAEIQKVLDITGVQTYVINSARVLFLNERPQPKSSTSKGVSHLCEICGRSL 122

Query: 121 LDPFRFCSLGCK---VKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRRN 180
           LDPFRFCSLGCK   +KN     +    K EE    RE +GRRL  +EEEE     +R  
Sbjct: 123 LDPFRFCSLGCKLVRIKNNGDATFNLSTKDEEGGEIREGMGRRLPSKEEEE-----LREG 182

Query: 181 QEGEIYQNHTHPSHSNSRRRKGIPQRAPF 207
            + +++ +   P HSNSRRRKGIP RAPF
Sbjct: 183 SQQDMHTSTLTPPHSNSRRRKGIPHRAPF 206

The following BLAST results are available for this feature:

BLAST of CmaCh12G008080 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh12G008080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY15_CUCSA	3.0e-80	77.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G136780 PE=4 SV=1	[more]
B9GEV1_POPTR	6.9e-69	67.46	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s21990g PE=4 SV=2	[more]
A0A067FAU2_CITSI	4.9e-67	63.81	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028583mg PE=4 SV=1	[more]
V4SB13_9ROSI	6.4e-67	63.81	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030107mg PE=4 SV=1	[more]
B9SCM5_RICCO	1.2e-65	67.29	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0475810 PE=4 SV=1	[more]

BLAST of CmaCh12G008080 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27930.1	7.1e-57	57.35	PLATZ transcription factor family protein	[more]
AT1G32700.1	7.1e-41	45.50	PLATZ transcription factor family protein	[more]
AT1G21000.1	6.0e-40	42.15	PLATZ transcription factor family protein	[more]
AT1G76590.1	3.0e-39	43.51	PLATZ transcription factor family protein	[more]
AT4G17900.1	5.6e-38	45.93	PLATZ transcription factor family protein	[more]

BLAST of CmaCh12G008080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443596\|ref\|XP_004139563.1\|	4.3e-80	77.10	PREDICTED: uncharacterized protein LOC101204359 [Cucumis sativus]	[more]
gi\|659071867\|ref\|XP_008462300.1\|	4.7e-79	76.28	PREDICTED: uncharacterized protein LOC103500687 [Cucumis melo]	[more]
gi\|566150274\|ref\|XP_002298164.2\|	9.9e-69	67.46	hypothetical protein POPTR_0001s21990g [Populus trichocarpa]	[more]
gi\|743922686\|ref\|XP_011005417.1\|	1.4e-67	66.99	PREDICTED: uncharacterized protein LOC105111676 isoform X1 [Populus euphratica]	[more]
gi\|743922688\|ref\|XP_011005418.1\|	1.4e-67	66.99	PREDICTED: uncharacterized protein LOC105111676 isoform X2 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006734	DUF597

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G008080.1	CmaCh12G008080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 60..133 score: 2.5
None	No IPR available	unknown	Coil	Coil	coord: 147..167 scor
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 1..206 score: 8.2
None	No IPR available	PANTHER	PTHR31065:SF4	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..206 score: 8.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G008080	Cucsa.200310	Cucumber (Gy14) v1	cgycmaB0593
CmaCh12G008080	Csa1G136780	Cucumber (Chinese Long) v2	cmacuB163
CmaCh12G008080	MELO3C004845	Melon (DHL92) v3.5.1	cmameB148
CmaCh12G008080	ClCG01G013970	Watermelon (Charleston Gray)	cmawcgB154
CmaCh12G008080	CSPI01G14080	Wild cucumber (PI 183967)	cmacpiB163
CmaCh12G008080	CmoCh12G008180	Cucurbita moschata (Rifu)	cmacmoB177
CmaCh12G008080	Cp4.1LG07g06760	Cucurbita pepo (Zucchini)	cmacpeB208
CmaCh12G008080	MELO3C004845.2	Melon (DHL92) v3.6.1	cmamedB161
CmaCh12G008080	CsaV3_1G014280	Cucumber (Chinese Long) v3	cmacucB0188
CmaCh12G008080	Cla97C01G012940	Watermelon (97103) v2	cmawmbB163
CmaCh12G008080	Bhi08G000106	Wax gourd	cmawgoB0220
CmaCh12G008080	CsGy1G014060	Cucumber (Gy14) v2	cgybcmaB058
CmaCh12G008080	Carg14668	Silver-seed gourd	carcmaB0436

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G008080	Cucurbita maxima (Rimu)	cmacmaB174
CmaCh12G008080	Cucurbita moschata (Rifu)	cmacmoB179
CmaCh12G008080	Watermelon (97103) v1	cmawmB165
CmaCh12G008080	Cucurbita pepo (Zucchini)	cmacpeB189
CmaCh12G008080	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G008080	Bottle gourd (USVL1VR-Ls)	cmalsiB168
CmaCh12G008080	Silver-seed gourd	carcmaB0222