CsaV3_1G012670 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G012670
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr1 : 7927516 .. 7932309 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAAAAGGGGACCAAGAGACCTAGTCCTTAACTATTTCCATGCAATAACAAGGCATTGAGAAAATTAATAAATAAAGTAGAAAAGTTGTAAAATTAATAAAAATGGCAAAGATTTTCTGAGATTTGAAGTCTCAGTGTGGGGAAGAAACAGATGCCTCAGCCTCAGCTCCTTCTTTAATGCTTCTTCTGATCTCTTTCTCTTCCTTCTCTCTCAACTTTCAAAATCATAAAACAAAAGAAATCAAGGTATTGCATAGAGAAACAAAGTTAGCGATAGACCCGAGGAAGAAGATTCACATAAACCCCTCAATTTCAGTGCTTTTCTCAAAATTACTTTCAACGAAAACAAAATGGTGACCAATTTAATTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTTTTTGAACTTTTAATTTTCATCGCTCTTTTTTGCAGATTTTTTTTCTCTCTAATTTATTTGGAAATTGTAGATTCTTCTTCATTAATTTTTCCCCCCCTCGATCTCCCACCTCAATTTCTCAAATCTTTTTGGATTTATTATCAAATTATATAAACAAACCCCCCCTCTAATTTCGTTTTATTCCTCTGTCTAATTATTATTTTTTTTCTTTTCTTTCCAATGGGTTAGTTATTAGAGTATAATGTGAGAGATAGGAGATGAGGAAAACTCAAGCCAAACGACAGCGTATTCCCCGGAGAGGACCTGGCGTTGCCGAGCTTGAGAAGATCCTCAAGGAGCAAGAAAGCGGTGCCGCCACTGATCATCAACACACTTCTTCGCCCCACACTAATTCTACTTCTACTGCTGCTACTACTACTACTCATCCCTTGTCATTAAACCCTCCACGGCCTCCGCCACCGCCTCCGCCTCCGCCGCTTGTTCAGATAATGACGCCGTCGCCGCCGCCGCTCCCGCGTGACTATGTTGCTTGGTCGAATAATCTTCCGTTGTTTCCAACTCTTGAATTTATTCCCCCGCCTTATCTGCCAACGGTCGTTACCGAAAAACCCTTGTTTCCGACGACACGAATGTCGGAGTCACAGCTGAATTTGGCTCCGTATTTTCTCCCGAGTTTTCAATACTCTGCTTCGTCCTTCAATCCTGACCAATATTATAATCCGATGGTGAGACGAGGATCGAGATGAGATCTTATATATATATATATATATATTCTCTTTAGGGATTTTAAAATAAAGAAGTGTATGGAAATTTGATTAATAAAACTTTGTCAGGTGAATGTTAATCAAGGATCTGGATCATCGTGTCCGTCAGCGACGTCATCGTCGGCGGGGAGACATTTTCGTGAAATAGAGCACCCTTCAAGCCAAATATCTACGGATTTCAACAACATTTGGAACTCGCCGGAGGAAGAAGAAAAGGCAAATTACTTCTCCTTACTTTTTATTTTTCGAATAAGGATAATTTTATTTCCATTCTTAAAATTTAAAAATGTTACAACATAATTTTTAATTTACTTTTTTATAAAAATGGAATACTATCCATTTCTCCCTAAATTTTAGCCTTAGTTTCTTAAGTTTTAAAATTTTACCTTCCTAAAATTTTGACGTTTGTTCTAACTTTAGATATCTAAATTTCAAAGTTTAATTTATATTTTTAGTTATACTAATTAATTTAAATGAATTAGAAGAAGTATAATATGTTAAGATTCACAGTTAAAATTATATTTCGTACATTTTAAATTAGTTAAAGGAAATATTTAAAAAACTTAAATTTCAGAGAGAAAATAATCTATTGATGTCTGTAATTTTTTGAAAAAAAGAAAAAGGAGTTTGAGCTATATTAAAATAGAAGAAAATAATAAAACTGATTTGTATGATTTTGATGGGATATTATTATTATTAAAGCAAAAGTTTGAATTAATAGTGTAAATTGACAGATGGTGAATGCAAAGAGGGTGATACCCTTTTTGGAAGAAAGCCACAGGGAGGAAGCAAATAATAATAATAACAATAATATCATAGAGAAGATGAGAGTTGAAAACAATATTATGGGAACCAAAGATTCATCTTCATCTTCTTCTTCTTCCATGGAAACTAATTGCTCTCCATTTCATTTTCATTCAAACTTCAGGTATTCTTCTTCTTTTCTTTTTATATTTCTTCATTACAATATTTCCTTTTTTCTTTCATTTTAATTGAAGTTTTTTTGTTTTTTTTATTTTTTGTTGGTTTTAAGATTTGGTTTAACAATTTTTAGAAAGTGGATTATTATGTGCAATAAACATAAGTGTTAAATAGGACAGGCTAGATTATTATCAACCAAATCTTTATACAAAATATATCCCCGTTTTTGGAGGTCTTAAAATTATTGTTTCTTTAGTCTTTAAAAATGTTGATTTAGAACTCAAAAATCATTTTGTATGTGTGTATATATAATTTAGAAAATTTAAAAAAAATGTAAATTTGGGTTTTTTTATAAGAAGATTAGTGTAGTTGAGCTAATATAATGTTTTAAGTTATAGATATCAACTTTGGTTCAATTTTACATGTATTAAGAAAATGAAATTTGAAAATGAGTAAGTTTCACTTTATTAAAATCTCTAAAAATCGTATAAATTCAAATATAGATTAATATAACAAAATGAGTTTTTAGTTCACCAACACGTAAGAGAAGTTCTAACATCTTCTCTTCAATAATCTTGAATGTCTAAACTAGTTAAGGTCGTTATGTTCTTCACGTTATTGTCACTCATTATCCATATGATAATTGTTTACTATTATTATTTTGATTATAATTAATTTTGGTATTGTTATTGTGTTACAAAATGTAGAGGTACAAAAAGGGGTTTAGGAGGCCAATCAAGGATGAGTAACACAAAAAGAAGTGGAAGGTATCAATTAGGAGATCAAGAAAGCAATTTGATGGCATTAGGATCTTCATCTTCCTCAGCTCCAAATGAAATTCCAACCTTCAATATTTTCCATCTCCCCCAAGTAAATATCTCTAAATTTTCATCTTCATACTTCTTCAAGACTTTTCTTTAAAATTCCTATAATAATCAACCATCATTCTCAAAATATACTCTCTTTTTTTTCTTCTCTTCATAGAAAAAACAATTTTCTACCTATTTTCAACATATGCATATTGAACTAAGTGCAATCAATAAATTTTTAGTTTATTTACTGAAAATTATATTGTAAAAATTACTTCAAATCGTATATTAATAATATGTAATTATATCCTCAATTTTTATTTACAAACTTTGAGCCTCTTATGTTAAATTTGACCATCTAATTGTATAAATGGTACAAAGTAAGTTTTGAGATTCAATTTTATATCATTGAAGATCGACGATTTTAAGGTGTAATAATTGCAATTACCCGAGTCGATTTTAAATCTTAATTTTAAAAGAAAATTCCAAATAAATCACCCAAAAAAAAGTCTGACCAAACAAAATATTCCAAAAGCAGGTAGCTAGAAAAATGCTCAAAACCAAAAACAAATGTCTAATCCAATACCAAAATGTCTAAAATCCAACAAAAAAACAAACACTCAATATACCTACAAAAGGCACCCACAAAATTACCATCTCTTAAATAGTAATAATATGGAAAATTTTCATTTTTTTAATCTTTATATTAAATCAAAAATAAATATAAAAAAATCAATTCAATTCTAAACTTAGAATAAATGGTATCATTACTAATTTTCTAAAATTGTTAAAAAAAACTAATCCCTAATTAATTACTTAAATCAAAATCATTAAGATACCTATACTCTTTTCCTTTTAAAATATTTGGGATTTTATTCCTTTGTTTTCTAGAACCATTACTTTAACTAATTTTATGATTACTTTCTAGTTCTATGTTTTTCTAAAACGAATGAGTTGTTAGGAGTATTAATTTCAAACCATACGTAATATTAATTTATTTTAAGACTCTTGTACTTTTAGCTTTGGTATATTTTGATAAATATATGTTTATTTTGAATTCTTGGTCATTGTACTTCTAAAAAGTAACCGTTTATGTTCCTATACTATCATTGTTAAGGAAAATAAAATACAACTTTCTCAAAGTACAACACTAAAATGGACCAAAATTGAAAGTTAGGGACAAAGTAGCATTCAAACCTAAAATAAGAAGGGATAAAGATTTTCCTCAAGAAGAAAAGGTGATATATTTAAGGGTAATATATACGCGTGTGTGTGTGTGTATGAAGAGGGCAAAAGAGAAAATTCACAGGTGTGAAATTATTTTGAAAGGAAACCATGGAGGTTCCACAGCATAGAGATGAAGGAGGATGTCCCTCAGATTACTACAAACTTAACTTCAACTCCTCCTTATATGAATCAAACTCAAACACAAAGGGCAACAGAGAAGTTGGCATGATCAGCTCTGGAGCCGGATCCGAAGCCGAAGCCGAAGCTGAAGGCATCGATCTGAATTTGAAGCTGTAATGTTGTTTGTTCTGAAGGAATTAAAAAGCCTTGACAAAGAGATATTTCAAAGATGTTTGTAACCGAAAAAAATATACATACATACACGATTTAAGGCTCTCAATTTCCTATATTAATTTAGTTGTAGACTACCTGTAGTTTTAGTGTAGAGAGCTACATTTGGATAGATGTTTCCCAATGTCTTACTTTAGAGTTTCAAGATTCTTTTAGGGAGTTCTTCTCTGATGAATTATATGTAAGAGATCAAGTGGTGGGAGTGGAGCAGAGCAAATATGTATAAATGTATGGTAATTGACATGCATGCATTTTGAGATTGAAGATTTAAATGCACCTTGTTCATTTATTGTACTCTCGTCTTAGAGTGGAAGGTAC

mRNA sequence

ATGAGGAAAACTCAAGCCAAACGACAGCGTATTCCCCGGAGAGGACCTGGCGTTGCCGAGCTTGAGAAGATCCTCAAGGAGCAAGAAAGCGGTGCCGCCACTGATCATCAACACACTTCTTCGCCCCACACTAATTCTACTTCTACTGCTGCTACTACTACTACTCATCCCTTGTCATTAAACCCTCCACGGCCTCCGCCACCGCCTCCGCCTCCGCCGCTTGTTCAGATAATGACGCCGTCGCCGCCGCCGCTCCCGCGTGACTATGTTGCTTGGTCGAATAATCTTCCGTTGTTTCCAACTCTTGAATTTATTCCCCCGCCTTATCTGCCAACGGTCGTTACCGAAAAACCCTTGTTTCCGACGACACGAATGTCGGAGTCACAGCTGAATTTGGCTCCGTATTTTCTCCCGAGTTTTCAATACTCTGCTTCGTCCTTCAATCCTGACCAATATTATAATCCGATGGTGAATGTTAATCAAGGATCTGGATCATCGTGTCCGTCAGCGACGTCATCGTCGGCGGGGAGACATTTTCGTGAAATAGAGCACCCTTCAAGCCAAATATCTACGGATTTCAACAACATTTGGAACTCGCCGGAGGAAGAAGAAAAGATGGTGAATGCAAAGAGGGTGATACCCTTTTTGGAAGAAAGCCACAGGGAGGAAGCAAATAATAATAATAACAATAATATCATAGAGAAGATGAGAGTTGAAAACAATATTATGGGAACCAAAGATTCATCTTCATCTTCTTCTTCTTCCATGGAAACTAATTGCTCTCCATTTCATTTTCATTCAAACTTCAGAGGTACAAAAAGGGGTTTAGGAGGCCAATCAAGGATGAGTAACACAAAAAGAAGTGGAAGGTATCAATTAGGAGATCAAGAAAGCAATTTGATGGCATTAGGATCTTCATCTTCCTCAGCTCCAAATGAAATTCCAACCTTCAATATTTTCCATCTCCCCCAAGAAACCATGGAGGTTCCACAGCATAGAGATGAAGGAGGATGTCCCTCAGATTACTACAAACTTAACTTCAACTCCTCCTTATATGAATCAAACTCAAACACAAAGGGCAACAGAGAAGTTGGCATGATCAGCTCTGGAGCCGGATCCGAAGCCGAAGCCGAAGCTGAAGGCATCGATCTGAATTTGAAGCTGTAA

Coding sequence (CDS)

ATGAGGAAAACTCAAGCCAAACGACAGCGTATTCCCCGGAGAGGACCTGGCGTTGCCGAGCTTGAGAAGATCCTCAAGGAGCAAGAAAGCGGTGCCGCCACTGATCATCAACACACTTCTTCGCCCCACACTAATTCTACTTCTACTGCTGCTACTACTACTACTCATCCCTTGTCATTAAACCCTCCACGGCCTCCGCCACCGCCTCCGCCTCCGCCGCTTGTTCAGATAATGACGCCGTCGCCGCCGCCGCTCCCGCGTGACTATGTTGCTTGGTCGAATAATCTTCCGTTGTTTCCAACTCTTGAATTTATTCCCCCGCCTTATCTGCCAACGGTCGTTACCGAAAAACCCTTGTTTCCGACGACACGAATGTCGGAGTCACAGCTGAATTTGGCTCCGTATTTTCTCCCGAGTTTTCAATACTCTGCTTCGTCCTTCAATCCTGACCAATATTATAATCCGATGGTGAATGTTAATCAAGGATCTGGATCATCGTGTCCGTCAGCGACGTCATCGTCGGCGGGGAGACATTTTCGTGAAATAGAGCACCCTTCAAGCCAAATATCTACGGATTTCAACAACATTTGGAACTCGCCGGAGGAAGAAGAAAAGATGGTGAATGCAAAGAGGGTGATACCCTTTTTGGAAGAAAGCCACAGGGAGGAAGCAAATAATAATAATAACAATAATATCATAGAGAAGATGAGAGTTGAAAACAATATTATGGGAACCAAAGATTCATCTTCATCTTCTTCTTCTTCCATGGAAACTAATTGCTCTCCATTTCATTTTCATTCAAACTTCAGAGGTACAAAAAGGGGTTTAGGAGGCCAATCAAGGATGAGTAACACAAAAAGAAGTGGAAGGTATCAATTAGGAGATCAAGAAAGCAATTTGATGGCATTAGGATCTTCATCTTCCTCAGCTCCAAATGAAATTCCAACCTTCAATATTTTCCATCTCCCCCAAGAAACCATGGAGGTTCCACAGCATAGAGATGAAGGAGGATGTCCCTCAGATTACTACAAACTTAACTTCAACTCCTCCTTATATGAATCAAACTCAAACACAAAGGGCAACAGAGAAGTTGGCATGATCAGCTCTGGAGCCGGATCCGAAGCCGAAGCCGAAGCTGAAGGCATCGATCTGAATTTGAAGCTGTAA

Protein sequence

MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHQHTSSPHTNSTSTAATTTTHPLSLNPPRPPPPPPPPPLVQIMTPSPPPLPRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLFPTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFLEESHREEANNNNNNNIIEKMRVENNIMGTKDSSSSSSSSMETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLGDQESNLMALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLYESNSNTKGNREVGMISSGAGSEAEAEAEGIDLNLKL

Homology

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BLAST of CsaV3_1G012670 vs. NCBI nr
Match: KGN64713.1 (hypothetical protein Csa_1G077140 [Cucumis sativus])

HSP 1 Score: 526.9 bits (1356), Expect = 5.7e-146
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60
           MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120

Query: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180
           PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR
Sbjct: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180

Query: 181 EIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFXXXXXXXXXXXXXXXXXXXXXXXXX 240
           EIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 EIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLGDQESNL 300
           XXXXXXXXXXXXXXXXETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLGDQESNL
Sbjct: 241 XXXXXXXXXXXXXXXXETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLGDQESNL 300

Query: 301 MALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLYESNSNTKG 360
           MALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLYESNSNTKG
Sbjct: 301 MALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLYESNSNTKG 360

Query: 361 NREVGMISSG 371
           NREVGMISSG
Sbjct: 361 NREVGMISSG 370

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BLAST of CsaV3_1G012670 vs. NCBI nr
Match: XP_008443003.1 (PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo])

HSP 1 Score: 425.2 bits (1092), Expect = 2.3e-115
Identity = 318/363 (87.60%), Postives = 329/363 (90.63%), Query Frame = 0


Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQES-GAATDHXXXXXXXXXXXXXXXXXXXXXXX 60
           MRKTQAKRQRIPRRGPGVAELEKILKEQES GA+TD             XXXXXXXXXXX
Sbjct: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGGASTDQ-----HISPHTNXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYV+W+NNLPLFPTLEFIPPPYLPTV  EKPL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVSWTNNLPLFPTLEFIPPPYLPTVAAEKPL 120

Query: 121 FPTTRMSE-SQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRH 180
           FPTTR+SE SQLNLAPYFLP+FQ+SASS NPDQYYNPMVN+NQGSGSSCPSATSSSAGR+
Sbjct: 121 FPTTRISEASQLNLAPYFLPTFQFSASSCNPDQYYNPMVNINQGSGSSCPSATSSSAGRY 180

Query: 181 FREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPF-----XXXXXXXXXXXXXXXXXX 240
            REIEHPSSQISTDFNNIW SPEE+EKMVNAKRVIPF     XXXXXXXXXXXXXXXXXX
Sbjct: 181 LREIEHPSSQISTDFNNIWTSPEEQEKMVNAKRVIPFLEXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQL 300
           XXXXXXXXXXXXXXXXXXXXXXXE NCSPFH HSNFRGTKRG  GQ   +NTKRSGRYQL
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXEINCSPFHSHSNFRGTKRGSAGQLMKNNTKRSGRYQL 300

Query: 301 GDQESNLMALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLYE 357
           GDQESNLMALGSSSSSAPNEIPTFNIFHLP+ETMEVPQHRD GGCPSD YKLNFNSSLYE
Sbjct: 301 GDQESNLMALGSSSSSAPNEIPTFNIFHLPKETMEVPQHRD-GGCPSDNYKLNFNSSLYE 357

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BLAST of CsaV3_1G012670 vs. NCBI nr
Match: XP_011648446.1 (PREDICTED: CREB-regulated transcription coactivator 1-like [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 1.7e-81
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60
           MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120

Query: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180
           PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR
Sbjct: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180

Query: 181 EIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPF 216
           EIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPF
Sbjct: 181 EIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPF 215

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BLAST of CsaV3_1G012670 vs. NCBI nr
Match: XP_023520013.1 (uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo] >XP_023520014.1 uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo] >XP_023520016.1 uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.6 bits (571), Expect = 6.0e-55
Identity = 230/380 (60.53%), Postives = 261/380 (68.68%), Query Frame = 0


Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGA-ATDHXXXXXXXXXXXXXXXXXXXXXXX 60
           M+KT  KR RIPRRGPGVAELEKILKEQ+ GA     XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MKKTHPKRHRIPRRGPGVAELEKILKEQQGGADXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPT-----VV 120
           XXXXXXXXXXXXXXXXXXXXXXXXXX RDY +WS NLPLFPTL+FIPP  LPT       
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXTRDYASWS-NLPLFPTLDFIPPA-LPTPTPAVAA 120

Query: 121 TEKPLFPTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSS 180
            EKPLFPTTR S++Q+NL P+F P+FQYSASS      +N M+N+        P + +S 
Sbjct: 121 VEKPLFPTTRKSDAQINLPPHFFPTFQYSASS------HNLMMNI-------IPGSATSP 180

Query: 181 AGRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFXXXXXXXXXXXXXXXXXXX 240
           A R++R+IEHPSSQIST  NN W SPEE++KMV+AKRV PF                   
Sbjct: 181 AARYYRQIEHPSSQISTQSNNTWTSPEEQQKMVSAKRVRPF----LDEGHRDPNAETRAP 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLG 300
                    XXXXXXXXXXXXX          SN RGTKRG GG+  M  +KRS RYQL 
Sbjct: 241 FFTNMATKEXXXXXXXXXXXXXXXXXXXXXXDSNSRGTKRGFGGE-LMRCSKRSERYQLA 300

Query: 301 DQESNLMALGSSSSSAPNEI-PTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFN---SS 360
            + S+LMALG SSSSAPNE+   FNI H PQETME  Q+RD GG  SDY K+ FN   SS
Sbjct: 301 GEVSHLMALG-SSSSAPNEVAAAFNIHH-PQETMEASQYRD-GGSASDYNKVTFNSSSSS 354

Query: 361 LYESNSNTKGNREVGMISSG 371
           LYE  S  KGN+++ +I SG
Sbjct: 361 LYE--SKLKGNKDI-VIGSG 354

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BLAST of CsaV3_1G012670 vs. NCBI nr
Match: XP_022927210.1 (nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022927212.1 nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022927213.1 nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata])

HSP 1 Score: 220.7 bits (561), Expect = 8.7e-54
Identity = 228/382 (59.69%), Postives = 257/382 (67.28%), Query Frame = 0


Query: 1   MRKTQAKRQRIPRRGPGVAELEKILK---EQESGAATDHXXXXXXXXXXXXXXXXXXXXX 60
           M+KTQ KR RIPRRGPGVAELEKILK             XXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MKKTQPKRHRIPRRGPGVAELEKILKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPT----- 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXX  RDY +WS NLPLFPTL+FIPP  LPT     
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXLTRDYASWS-NLPLFPTLDFIPPA-LPTPTPAA 120

Query: 121 VVTEKPLFPTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATS 180
              EKPLFPTTR S++Q+NL P+F P+FQYSASS      +NPM+N+        P + +
Sbjct: 121 AAVEKPLFPTTRKSDAQINLPPHFFPTFQYSASS------HNPMMNI-------IPGSAT 180

Query: 181 SSAGRHFREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFXXXXXXXXXXXXXXXXX 240
           S A R++R+IEHPSSQIST FNN W SPEE++KMV+AKRV PF                 
Sbjct: 181 SPAARYYRQIEHPSSQISTQFNNTWTSPEEQQKMVSAKRVRPF----LDEGHRDPNAESR 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQ 300
                      XXXXXXXXXXXXX          SN RGTKRG GG+  M  +KRS RYQ
Sbjct: 241 APFFTNMATKEXXXXXXXXXXXXXXXXXXXXXXDSNSRGTKRGFGGE-LMRCSKRSERYQ 300

Query: 301 LGDQESNLMALGSSSSSAPNEI-PTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFN--- 360
           L  + S+LMALG SSSSAPNE+   FNI H PQET E  Q+RD GG  SDY K+ FN   
Sbjct: 301 LAGEVSHLMALG-SSSSAPNEVAAAFNIHH-PQETTEASQYRD-GGSASDYNKVTFNSSS 356

Query: 361 SSLYESNSNTKGNREVGMISSG 371
           SSLYE  S  KGN+E+ +I SG
Sbjct: 361 SSLYE--SKLKGNKEI-VIGSG 356

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BLAST of CsaV3_1G012670 vs. TrEMBL
Match: tr|A0A0A0LSF6|A0A0A0LSF6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077140 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 3.7e-146
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60
           MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGAATDHXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPLF 120

Query: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180
           PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR
Sbjct: 121 PTTRMSESQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRHFR 180

Query: 181 EIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFXXXXXXXXXXXXXXXXXXXXXXXXX 240
           EIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 EIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPFXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLGDQESNL 300
           XXXXXXXXXXXXXXXXETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLGDQESNL
Sbjct: 241 XXXXXXXXXXXXXXXXETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQLGDQESNL 300

Query: 301 MALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLYESNSNTKG 360
           MALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLYESNSNTKG
Sbjct: 301 MALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLYESNSNTKG 360

Query: 361 NREVGMISSG 371
           NREVGMISSG
Sbjct: 361 NREVGMISSG 370

[Close]

BLAST of CsaV3_1G012670 vs. TrEMBL
Match: tr|A0A1S3B6J8|A0A1S3B6J8_CUCME (uncharacterized protein DDB_G0271670-like OS=Cucumis melo OX=3656 GN=LOC103486731 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.5e-115
Identity = 318/363 (87.60%), Postives = 329/363 (90.63%), Query Frame = 0


Query: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQES-GAATDHXXXXXXXXXXXXXXXXXXXXXXX 60
           MRKTQAKRQRIPRRGPGVAELEKILKEQES GA+TD             XXXXXXXXXXX
Sbjct: 1   MRKTQAKRQRIPRRGPGVAELEKILKEQESGGASTDQ-----HISPHTNXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVAWSNNLPLFPTLEFIPPPYLPTVVTEKPL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYV+W+NNLPLFPTLEFIPPPYLPTV  EKPL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXRDYVSWTNNLPLFPTLEFIPPPYLPTVAAEKPL 120

Query: 121 FPTTRMSE-SQLNLAPYFLPSFQYSASSFNPDQYYNPMVNVNQGSGSSCPSATSSSAGRH 180
           FPTTR+SE SQLNLAPYFLP+FQ+SASS NPDQYYNPMVN+NQGSGSSCPSATSSSAGR+
Sbjct: 121 FPTTRISEASQLNLAPYFLPTFQFSASSCNPDQYYNPMVNINQGSGSSCPSATSSSAGRY 180

Query: 181 FREIEHPSSQISTDFNNIWNSPEEEEKMVNAKRVIPF-----XXXXXXXXXXXXXXXXXX 240
            REIEHPSSQISTDFNNIW SPEE+EKMVNAKRVIPF     XXXXXXXXXXXXXXXXXX
Sbjct: 181 LREIEHPSSQISTDFNNIWTSPEEQEKMVNAKRVIPFLEXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXETNCSPFHFHSNFRGTKRGLGGQSRMSNTKRSGRYQL 300
           XXXXXXXXXXXXXXXXXXXXXXXE NCSPFH HSNFRGTKRG  GQ   +NTKRSGRYQL
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXEINCSPFHSHSNFRGTKRGSAGQLMKNNTKRSGRYQL 300

Query: 301 GDQESNLMALGSSSSSAPNEIPTFNIFHLPQETMEVPQHRDEGGCPSDYYKLNFNSSLYE 357
           GDQESNLMALGSSSSSAPNEIPTFNIFHLP+ETMEVPQHRD GGCPSD YKLNFNSSLYE
Sbjct: 301 GDQESNLMALGSSSSSAPNEIPTFNIFHLPKETMEVPQHRD-GGCPSDNYKLNFNSSLYE 357

The following BLAST results are available for this feature:

BLAST of CsaV3_1G012670 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64713.1	5.7e-146	100.00	hypothetical protein Csa_1G077140 [Cucumis sativus]	[more]
XP_008443003.1	2.3e-115	87.60	PREDICTED: uncharacterized protein DDB_G0271670-like [Cucumis melo]	[more]
XP_011648446.1	1.7e-81	100.00	PREDICTED: CREB-regulated transcription coactivator 1-like [Cucumis sativus]	[more]
XP_023520013.1	6.0e-55	60.53	uncharacterized protein LOC111783325 [Cucurbita pepo subsp. pepo] >XP_023520014....	[more]
XP_022927210.1	8.7e-54	59.69	nuclear envelope pore membrane protein POM 121-like [Cucurbita moschata] >XP_022...	[more]

BLAST of CsaV3_1G012670 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G012670 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G012670 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSF6\|A0A0A0LSF6_CUCSA	3.7e-146	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077140 PE=4 SV=1	[more]
tr\|A0A1S3B6J8\|A0A1S3B6J8_CUCME	1.5e-115	87.60	uncharacterized protein DDB_G0271670-like OS=Cucumis melo OX=3656 GN=LOC10348673...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G012670.1	CsaV3_1G012670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 221..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 354..378
None	No IPR available	PANTHER	PTHR33388	FAMILY NOT NAMED	coord: 3..388

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G012670	CSPI01G12470	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G012670	CmaCh13G006170	Cucurbita maxima (Rimu)	cmacucB0249
CsaV3_1G012670	CmaCh18G003980	Cucurbita maxima (Rimu)	cmacucB0465
CsaV3_1G012670	CmoCh13G006400	Cucurbita moschata (Rifu)	cmocucB0235
CsaV3_1G012670	CmoCh18G003820	Cucurbita moschata (Rifu)	cmocucB0457
CsaV3_1G012670	Cp4.1LG20g04610	Cucurbita pepo (Zucchini)	cpecucB0624
CsaV3_1G012670	CsGy1G012510	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G012670	Carg21523	Silver-seed gourd	carcucB0991
CsaV3_1G012670	Cla019686	Watermelon (97103) v1	cucwmB029
CsaV3_1G012670	MELO3C002635	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G012670	ClCG03G007900	Watermelon (Charleston Gray)	cucwcgB052
CsaV3_1G012670	Lsi02G007890	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G012670	MELO3C002635.2	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G012670	Cla97C03G059180	Watermelon (97103) v2	cucwmbB043
CsaV3_1G012670	Bhi08G001852	Wax gourd	cucwgoB054

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G012670	Watermelon (97103) v2	cucwmbB022
CsaV3_1G012670	Cucumber (Chinese Long) v3	cuccucB030
CsaV3_1G012670	Cucumber (Gy14) v1	cgycucB174