CsaV3_1G010150 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G010150
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 6311061 .. 6311317 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGGCAGTACTGTCTCTCCGGAACTCACTCATCTCCCTTTCTCGACGACGTTGAAGCTTCTTCAGCTATTGTCGCTGGCAATCCACTAATCCTCAGGGCTTACTGTAAACTACCACGCTCCCTGCTTCAGCGTTTCGCTCTCGTTTCTGGGTCGCATTCATTCTTCCTCCCTCAGCGCTTAATTCTCGTCTCTCAGCGTGAGTTTTTATGTTCTCTTGCTTTATGCGAGTCTGTTATTCGATGTATTGATCTTTGA

mRNA sequence

CGGCAGTACTGTCTCTCCGGAACTCACTCATCTCCCTTTCTCGACGACGTTGAAGCTTCTTCAGCTATTGTCGCTGGCAATCCACTAATCCTCAGGGCTTACTGTAAACTACCACGCTCCCTGCTTCAGCGTTTCGCTCTCGTTTCTGGGTCGCATTCATTCTTCCTCCCTCAGCGCTTAATTCTCGTCTCTCAGCGTGAGTTTTTATGTTCTCTTGCTTTATGCGAGTCTGTTATTCGATGTATTGATCTTTG

Coding sequence (CDS)

CGGCAGTACTGTCTCTCCGGAACTCACTCATCTCCCTTTCTCGACGACGTTGAAGCTTCTTCAGCTATTGTCGCTGGCAATCCACTAATCCTCAGGGCTTACTGTAAACTACCACGCTCCCTGCTTCAGCGTTTCGCTCTCGTTTCTGGGTCGCATTCATTCTTCCTCCCTCAGCGCTTAATTCTCGTCTCTCAGCGTGAGTTTTTATGTTCTCTTGCTTTATGCGAGTCTGTTATTCGATGTATTGATCTTTG

Protein sequence

RQYCLSGTHSSPFLDDVEASSAIVAGNPLILRAYCKLPRSLLQRFALVSGSHSFFLPQRLILVSQREFLCSLALCESVIRCIDLX
BLAST of CsaV3_1G010150 vs. NCBI nr
Match: KGN64463.1 (hypothetical protein Csa_1G056990 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 5.5e-38
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 2  QYCLSGTHSSPFLDDVEASSAIVAGNPLILRAYCKLPRSLLQRFALVSGSHSFFLPQRLI 61
          QYCLSGTHSSPFLDDVEASSAIVAGNPLILRAYCKLPRSLLQRFALVSGSHSFFLPQRLI
Sbjct: 2  QYCLSGTHSSPFLDDVEASSAIVAGNPLILRAYCKLPRSLLQRFALVSGSHSFFLPQRLI 61

Query: 62 LVSQREFLCSLALCESVIRCIDL 85
          LVSQREFLCSLALCESVIRCIDL
Sbjct: 62 LVSQREFLCSLALCESVIRCIDL 84

BLAST of CsaV3_1G010150 vs. TrEMBL
Match: tr|A0A0A0LRS3|A0A0A0LRS3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056990 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.7e-38
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 2  QYCLSGTHSSPFLDDVEASSAIVAGNPLILRAYCKLPRSLLQRFALVSGSHSFFLPQRLI 61
          QYCLSGTHSSPFLDDVEASSAIVAGNPLILRAYCKLPRSLLQRFALVSGSHSFFLPQRLI
Sbjct: 2  QYCLSGTHSSPFLDDVEASSAIVAGNPLILRAYCKLPRSLLQRFALVSGSHSFFLPQRLI 61

Query: 62 LVSQREFLCSLALCESVIRCIDL 85
          LVSQREFLCSLALCESVIRCIDL
Sbjct: 62 LVSQREFLCSLALCESVIRCIDL 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN64463.15.5e-38100.00hypothetical protein Csa_1G056990 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LRS3|A0A0A0LRS3_CUCSA3.7e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056990 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G010150.1CsaV3_1G010150.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G010150CSPI01G10080Wild cucumber (PI 183967)cpicucB001
CsaV3_1G010150CsGy1G010110Cucumber (Gy14) v2cgybcucB002
The following gene(s) are paralogous to this gene:

None