CsaV3_1G009830 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G009830
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	auxin-responsive protein SAUR71-like
Location	chr1 : 6097228 .. 6097817 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGGATGAAGAAAAAGTGGAGTAAGTATATGGGTTTGAAGGGATTGGGGCGGAGCCGATCGGTGACCGGAGGAACAGCGGTCGGACCGGAAGGTATGTCGAAAAAGAGCAAATCTTTGAACAGTGGTCCGAAATATAAAACACCGGTGGCTCCGGACGGTTGTTTTGCTGTGTATGTGGGAGCGGAACGGCAACGGTTTGTTGTGAGAACGGAATTTGCGAATCATCCTTTATTTCAGATGCTGCTAGAAGATGCGGAGGTGGAATATGGGTATAACAGTCAAGGCCCTATTTTGCTTCCTTGTGAAGTTGGGATGTTTTATAATGTGTTGGCGGAGATGGACGACGGCGGCGATGGGATTAGCAACCGTTGGACAGGTGGAGAAAGCGGTGGTTTAATTGCTTGTAGCCCACTTCGGCTGACTAGTTGTGGTAGTAGAAATGGCGGTGGGTATAGGGTGTTGAGTCCGTCATCGATGCTTAAATTAAATGGACTTTGACTTGGCACATAATTTCACAAATATATATTATTTATTTATTTTTCTTATATATACGGTAAGATTTCTTCTTTGTTCGAGTGTATTGA

mRNA sequence

ATGGAGGGGATGAAGAAAAAGTGGAGTAAGTATATGGGTTTGAAGGGATTGGGGCGGAGCCGATCGGTGACCGGAGGAACAGCGGTCGGACCGGAAGGTATGTCGAAAAAGAGCAAATCTTTGAACAGTGGTCCGAAATATAAAACACCGGTGGCTCCGGACGGTTGTTTTGCTGTGTATGTGGGAGCGGAACGGCAACGGTTTGTTGTGAGAACGGAATTTGCGAATCATCCTTTATTTCAGATGCTGCTAGAAGATGCGGAGGTGGAATATGGGTATAACAGTCAAGGCCCTATTTTGCTTCCTTGTGAAGTTGGGATGTTTTATAATGTGTTGGCGGAGATGGACGACGGCGGCGATGGGATTAGCAACCGTTGGACAGGTGGAGAAAGCGGTGGTTTAATTGCTTGTAGCCCACTTCGGCTGACTAGTTGTGGTAGTAGAAATGGCGATTTCTTCTTTGTTCGAGTGTATTGA

Coding sequence (CDS)

ATGGAGGGGATGAAGAAAAAGTGGAGTAAGTATATGGGTTTGAAGGGATTGGGGCGGAGCCGATCGGTGACCGGAGGAACAGCGGTCGGACCGGAAGGTATGTCGAAAAAGAGCAAATCTTTGAACAGTGGTCCGAAATATAAAACACCGGTGGCTCCGGACGGTTGTTTTGCTGTGTATGTGGGAGCGGAACGGCAACGGTTTGTTGTGAGAACGGAATTTGCGAATCATCCTTTATTTCAGATGCTGCTAGAAGATGCGGAGGTGGAATATGGGTATAACAGTCAAGGCCCTATTTTGCTTCCTTGTGAAGTTGGGATGTTTTATAATGTGTTGGCGGAGATGGACGACGGCGGCGATGGGATTAGCAACCGTTGGACAGGTGGAGAAAGCGGTGGTTTAATTGCTTGTAGCCCACTTCGGCTGACTAGTTGTGGTAGTAGAAATGGCGATTTCTTCTTTGTTCGAGTGTATTGA

Protein sequence

MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGDGISNRWTGGESGGLIACSPLRLTSCGSRNGDFFFVRVY

Homology

[Close]

BLAST of CsaV3_1G009830 vs. NCBI nr
Match: XP_004153127.2 (PREDICTED: uncharacterized protein LOC101220090 [Cucumis sativus] >KGN64431.1 hypothetical protein Csa_1G051690 [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 5.2e-82
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY
Sbjct: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD
Sbjct: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNG 151
           GISNRWTGGESGGLIACSPLRLTSCGSRNG
Sbjct: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNG 150

[Close]

BLAST of CsaV3_1G009830 vs. NCBI nr
Match: XP_008446293.1 (PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo])

HSP 1 Score: 277.7 bits (709), Expect = 2.4e-71
Identity = 138/150 (92.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKYMGLKGLGRSRSVTGGTAV   GMSKKSKS NSG KYKTPVAPDGCFAVY
Sbjct: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAV---GMSKKSKSWNSGSKYKTPVAPDGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMD GGD
Sbjct: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDGGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNG 151
           G+S+RWTGGESG    CSPLRLTSCGSRNG
Sbjct: 121 GLSSRWTGGESG----CSPLRLTSCGSRNG 143

[Close]

BLAST of CsaV3_1G009830 vs. NCBI nr
Match: XP_022994487.1 (auxin-responsive protein SAUR32-like [Cucurbita maxima])

HSP 1 Score: 246.5 bits (628), Expect = 6.0e-62
Identity = 119/152 (78.29%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKY+GL    RSRSVTG  AV  E ++++SKSLNSG K++TPVAPDGCF+VY
Sbjct: 1   MEGMKKKWSKYLGLV---RSRSVTGKPAVAAEEVTRRSKSLNSGSKFRTPVAPDGCFSVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VG ER+RFVV+T+FANHPLFQMLLEDAE+EYGYNSQGPI LPCEVGMFY+VLAEM DGGD
Sbjct: 61  VGPERRRFVVKTKFANHPLFQMLLEDAEMEYGYNSQGPICLPCEVGMFYDVLAEM-DGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGDF 153
           G+SNRWTGGE GGLIACSPLRLT CGSR+  +
Sbjct: 121 GLSNRWTGGEGGGLIACSPLRLTMCGSRHSGY 148

[Close]

BLAST of CsaV3_1G009830 vs. NCBI nr
Match: XP_022955265.1 (auxin-responsive protein SAUR32-like [Cucurbita moschata])

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 119/152 (78.29%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKY+GL    RSRSVTG  AV  E ++++SKSLNSG K++TPVAPDGCF+VY
Sbjct: 1   MEGMKKKWSKYLGLV---RSRSVTGKPAVAAEEVTRRSKSLNSGSKFRTPVAPDGCFSVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VG ER+RFVV+TEFANHPLFQMLLEDAE+EYGYNSQGPI LPCEVGMFY+VLAEM DGGD
Sbjct: 61  VGPERRRFVVKTEFANHPLFQMLLEDAEMEYGYNSQGPICLPCEVGMFYDVLAEM-DGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGDF 153
           G+S RWTGGE GGLIACSPLRLT CGSR   +
Sbjct: 121 GLSKRWTGGEGGGLIACSPLRLTMCGSRQSGY 148

[Close]

BLAST of CsaV3_1G009830 vs. NCBI nr
Match: XP_023542792.1 (auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60
Identity = 118/152 (77.63%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKY+GL    RSRSVTG  AV  E ++++SKSLNSG K++TPVAPDGCF+VY
Sbjct: 1   MEGMKKKWSKYLGLV---RSRSVTGKPAVAAEEVTRRSKSLNSGSKFRTPVAPDGCFSVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VG ER+RFVV+TEFANHPLFQMLLEDAE+EYGYNSQGPI LPCEVGMFY+VLAEM DGGD
Sbjct: 61  VGPERRRFVVKTEFANHPLFQMLLEDAEMEYGYNSQGPICLPCEVGMFYDVLAEM-DGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGDF 153
            +SNRWT GE GGLIACSPLRLT CGSR   +
Sbjct: 121 ELSNRWTAGEGGGLIACSPLRLTMCGSRQSGY 148

[Close]

BLAST of CsaV3_1G009830 vs. TAIR10
Match: AT5G50760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18
Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 37  KSKSLNSGPKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQ 96
           KS      PK ++P    G F VYVG  +QR VV+T+  NHPLF+ LLEDAE EYGY   
Sbjct: 42  KSNESKGKPKKESP--SHGFFTVYVGPTKQRIVVKTKLLNHPLFKNLLEDAETEYGYRRD 101

Query: 97  GPILLPCEVGMFYNVLAEM 116
           GPI+LPCEV  F+  LA+M
Sbjct: 102 GPIVLPCEVDFFFKALADM 118

[Close]

BLAST of CsaV3_1G009830 vs. TAIR10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.9 bits (172), Expect = 8.2e-13
Identity = 39/107 (36.45%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 35  SKKSKSLNSGPKYKTPVAPDGCFAVYVGA---ERQRFVVRTEFANHPLFQMLLEDAEVEY 94
           S +  ++ S  K+     P GC A+ VG+   E+QRFVV   + NHPLF  LL +AE EY
Sbjct: 13  SNRPNNVKSNSKHGIKDVPKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEY 72

Query: 95  GYNSQGPILLPCEVGMF------YNVLAEMDDGGDGISNRWTGGESG 133
           G+  +G I +PC V +F       N    +DD  D       G + G
Sbjct: 73  GFEQKGTITIPCHVEVFRYVQDMINRERSLDDDDDASKQTGCGAKHG 119

[Close]

BLAST of CsaV3_1G009830 vs. TAIR10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 37  KSKSLNSGPKYKTPVAPDGCFAVYVGA---ERQRFVVRTEFANHPLFQMLLEDAEVEYGY 96
           KS  L+     K    P GC A+ VG+   E+QRF+V   + NHPLF  LL++AE EYG+
Sbjct: 9   KSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGF 68

Query: 97  NSQGPILLPCEVGMFYNVLAEMD 117
           + +G I +PC V  F  V A +D
Sbjct: 69  DQKGTITIPCHVEEFRYVQALID 91

[Close]

BLAST of CsaV3_1G009830 vs. TAIR10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 50  PVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFY 109
           P  P G  AVYVG E +RF++ T F +H LF++LLE AE EYG++  G + +PCEV  F 
Sbjct: 77  PDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFK 136

Query: 110 NVL 113
            +L
Sbjct: 137 YLL 139

[Close]

BLAST of CsaV3_1G009830 vs. TAIR10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 37/100 (37.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 17  LGRSRSVTGGTAVGPEGMSKK-SKSLNSGPKYKTPVA--PDGCFAVYVGAERQRFVVRTE 76
           +G++  +  G+ V    M K+  K  + G     PV+  P G  AV VG  R+R+VVR +
Sbjct: 1   MGKNNKI--GSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAK 60

Query: 77  FANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLA 114
             NHP+F+ LL +AE EYG+ + GP+ +PC+  +F +++A
Sbjct: 61  HLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIA 98

[Close]

BLAST of CsaV3_1G009830 vs. Swiss-Prot
Match: sp|Q9ZUZ3|SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 37  KSKSLNSGPKYKTPVAPDGCFAVYVGA---ERQRFVVRTEFANHPLFQMLLEDAEVEYGY 96
           KS  L+     K    P GC A+ VG+   E+QRF+V   + NHPLF  LL++AE EYG+
Sbjct: 9   KSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGF 68

Query: 97  NSQGPILLPCEVGMFYNVLAEMD 117
           + +G I +PC V  F  V A +D
Sbjct: 69  DQKGTITIPCHVEEFRYVQALID 91

[Close]

BLAST of CsaV3_1G009830 vs. Swiss-Prot
Match: sp|Q9SGU2|SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 35  SKKSKSLNSGPKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYN 94
           S+  +      K+K+ V P+G   VYVG E +RFVV  E  NHP+F  LL+ +  EYGY 
Sbjct: 22  SESQRGRTKKEKHKSWV-PEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYE 81

Query: 95  SQGPILLPCEVGMFYNVLAEM 116
            QG + +PC V +F  +L  +
Sbjct: 82  QQGVLRIPCHVLVFERILESL 101

[Close]

BLAST of CsaV3_1G009830 vs. Swiss-Prot
Match: sp|Q9LTV3|SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 40  SLNSGPKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPI 99
           S+    K +T   P+G   VYVG E +RFVV  E  NHP+F  LL  +  EYGY  +G +
Sbjct: 38  SVTRRSKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVL 97

Query: 100 LLPCEVGMFYNVLAEM 116
            +PC V +F  ++  +
Sbjct: 98  QIPCHVLVFERIMESL 113

[Close]

BLAST of CsaV3_1G009830 vs. Swiss-Prot
Match: sp|Q9SA49|SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 31/75 (41.33%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 45  PKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCE 104
           P  +    P G   VYVG E +RFVV  E  NHP+F  LL  +  EYGY  +G + +PC 
Sbjct: 47  PARRVNTVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCH 106

Query: 105 VGMFYNVLAEMDDGG 120
           V +F  V+  +  GG
Sbjct: 107 VIVFERVVETLRLGG 121

[Close]

BLAST of CsaV3_1G009830 vs. Swiss-Prot
Match: sp|O64538|SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 53  PDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVL 112
           P G   V VG +++RFVV  E  NHP+F  LL  +  EYGY  +G + +PC V +F  V+
Sbjct: 49  PSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVV 108

Query: 113 AEMDDG 119
             +  G
Sbjct: 109 ESLRSG 114

[Close]

BLAST of CsaV3_1G009830 vs. TrEMBL
Match: tr|A0A0A0LWR6|A0A0A0LWR6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051690 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 3.5e-82
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY
Sbjct: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD
Sbjct: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNG 151
           GISNRWTGGESGGLIACSPLRLTSCGSRNG
Sbjct: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNG 150

[Close]

BLAST of CsaV3_1G009830 vs. TrEMBL
Match: tr|A0A1S3BEQ2|A0A1S3BEQ2_CUCME (auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103489067 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71
Identity = 138/150 (92.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKYMGLKGLGRSRSVTGGTAV   GMSKKSKS NSG KYKTPVAPDGCFAVY
Sbjct: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAV---GMSKKSKSWNSGSKYKTPVAPDGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMD GGD
Sbjct: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDGGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNG 151
           G+S+RWTGGESG    CSPLRLTSCGSRNG
Sbjct: 121 GLSSRWTGGESG----CSPLRLTSCGSRNG 143

[Close]

BLAST of CsaV3_1G009830 vs. TrEMBL
Match: tr|A0A2P4I7H6|A0A2P4I7H6_QUESU (Auxin-responsive protein saur32 OS=Quercus suber OX=58331 GN=CFP56_36764 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.0e-30
Identity = 81/167 (48.50%), Postives = 93/167 (55.69%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSG---------------- 60
           M+ MK+KW K + +K   R +S  GG             SL                   
Sbjct: 1   MDVMKEKWKKNLIVKTWERCKSFGGGNKQXXXXXDDNINSLTKSRSWSYDHTKPSDKEER 60

Query: 61  -PKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPC 120
             K K  VAPDGCF+VYVG  +QRFVV+TEFANHPLFQMLLEDAE+EYGYNSQGPILLPC
Sbjct: 61  QQKKKCKVAPDGCFSVYVGPLKQRFVVKTEFANHPLFQMLLEDAELEYGYNSQGPILLPC 120

Query: 121 EVGMFYNVLAEMDDGGDGISNRWTGGESGGLIACSPLRLTSCGSRNG 151
           EV +FY VLAEMD G +             LI  SP R +  G  NG
Sbjct: 121 EVDLFYKVLAEMDCGEEARLGCNFAKGCSPLILRSPARRSGSGDYNG 167

[Close]

BLAST of CsaV3_1G009830 vs. TrEMBL
Match: tr|A0A1Q3CN97|A0A1Q3CN97_CEPFO (Auxin_inducible domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_25035 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.9e-29
Identity = 72/160 (45.00%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGP--------------EGMSKKSKSLNSGPK 60
           M+ +KKKW K +  K   R RSV       P                +++ S   +  PK
Sbjct: 8   MDLLKKKWKKNLIFKTWDRRRSVGSSIHNSPGEISFNSLAKSNSWPSLTRTSSDGDQKPK 67

Query: 61  YKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVG 120
            K  VAPDGCF VYVG ++QRF++RT+F NHPLF+MLLEDAE+EYG+NS+GPILLPC+V 
Sbjct: 68  SKCQVAPDGCFTVYVGPQKQRFIIRTQFVNHPLFKMLLEDAELEYGFNSEGPILLPCDVD 127

Query: 121 MFYNVLAEMDDGGDGISNRWTGGESGGLIACSPLRLTSCG 147
           +FY VLA+MD+  +   +   GG    L+  SP R ++ G
Sbjct: 128 LFYKVLADMDNEAE--MSPGCGGGYSSLLTFSPSRRSNNG 165

[Close]

BLAST of CsaV3_1G009830 vs. TrEMBL
Match: tr|A0A2C9UIW2|A0A2C9UIW2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G048400 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.9e-29
Identity = 77/153 (50.33%), Postives = 95/153 (62.09%), Query Frame = 0


Query: 5   KKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSK----KSKSL----------NSGPKYKTP 64
           K  W K + LK   R RS+  G+      +      KSKS           N   K K  
Sbjct: 5   KAMWRKNLFLKAWERCRSLGSGSKKSARNIISSSLIKSKSWHCTTRSIEGDNEKRKRKIK 64

Query: 65  VAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYN 124
           VAPDGCF+VYVG E+QRFV++TEFANHPLF++LLEDAE+EYG+NS+GPILLPC+V +FY 
Sbjct: 65  VAPDGCFSVYVGPEKQRFVIKTEFANHPLFKLLLEDAELEYGFNSEGPILLPCDVDLFYK 124

Query: 125 VLAEMDDGGDGISN--RWTGGESGGLIACSPLR 142
           VLAEMD G + I +   W+      LI CSP R
Sbjct: 125 VLAEMDSGEEEIMSIPSWS-----PLILCSPSR 152

The following BLAST results are available for this feature:

BLAST of CsaV3_1G009830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153127.2	5.2e-82	100.00	PREDICTED: uncharacterized protein LOC101220090 [Cucumis sativus] >KGN64431.1 hy...	[more]
XP_008446293.1	2.4e-71	92.00	PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo]	[more]
XP_022994487.1	6.0e-62	78.29	auxin-responsive protein SAUR32-like [Cucurbita maxima]	[more]
XP_022955265.1	1.3e-61	78.29	auxin-responsive protein SAUR32-like [Cucurbita moschata]	[more]
XP_023542792.1	1.1e-60	77.63	auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_1G009830 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50760.1	1.0e-18	54.43	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	8.2e-13	36.45	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	1.1e-12	43.37	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	1.1e-12	49.21	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	2.4e-12	37.00	SAUR-like auxin-responsive protein family	[more]

BLAST of CsaV3_1G009830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZUZ3\|SAU32_ARATH	1.9e-11	43.37	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
sp\|Q9SGU2\|SAU71_ARATH	1.3e-10	40.74	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
sp\|Q9LTV3\|SAU72_ARATH	1.1e-09	39.47	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 S...	[more]
sp\|Q9SA49\|SAU41_ARATH	1.8e-09	41.33	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
sp\|O64538\|SAU40_ARATH	2.0e-08	40.91	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]

BLAST of CsaV3_1G009830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LWR6\|A0A0A0LWR6_CUCSA	3.5e-82	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051690 PE=4 SV=1	[more]
tr\|A0A1S3BEQ2\|A0A1S3BEQ2_CUCME	1.6e-71	92.00	auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103489067 PE=...	[more]
tr\|A0A2P4I7H6\|A0A2P4I7H6_QUESU	9.0e-30	48.50	Auxin-responsive protein saur32 OS=Quercus suber OX=58331 GN=CFP56_36764 PE=4 SV...	[more]
tr\|A0A1Q3CN97\|A0A1Q3CN97_CEPFO	9.9e-29	45.00	Auxin_inducible domain-containing protein (Fragment) OS=Cephalotus follicularis ...	[more]
tr\|A0A2C9UIW2\|A0A2C9UIW2_MANES	9.9e-29	50.33	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G048400 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G009830.1	CsaV3_1G009830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 40..113 e-value: 5.2E-24 score: 84.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..46
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 3..120
None	No IPR available	PANTHER	PTHR31374:SF10	SUBFAMILY NOT NAMED	coord: 3..120

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G009830	CSPI01G09770	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G009830	Cucsa.134820	Cucumber (Gy14) v1	cgycucB196
CsaV3_1G009830	CmaCh13G008220	Cucurbita maxima (Rimu)	cmacucB0235
CsaV3_1G009830	CmoCh13G008530	Cucurbita moschata (Rifu)	cmocucB0222
CsaV3_1G009830	Cp4.1LG20g02870	Cucurbita pepo (Zucchini)	cpecucB0634
CsaV3_1G009830	Cp4.1LG09g09450	Cucurbita pepo (Zucchini)	cpecucB0031
CsaV3_1G009830	CsGy1G009790	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G009830	Carg06809	Silver-seed gourd	carcucB0529
CsaV3_1G009830	Carg07615	Silver-seed gourd	carcucB1046
CsaV3_1G009830	Cla002638	Watermelon (97103) v1	cucwmB013
CsaV3_1G009830	MELO3C002378	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G009830	ClCG03G003940	Watermelon (Charleston Gray)	cucwcgB038
CsaV3_1G009830	Lsi02G005210	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G009830	MELO3C002378.2	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G009830	Cla97C03G055090	Watermelon (97103) v2	cucwmbB030
CsaV3_1G009830	Bhi12G002149	Wax gourd	cucwgoB001
CsaV3_1G009830	Bhi08G001249	Wax gourd	cucwgoB035

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G009830	Silver-seed gourd	carcucB0397
CsaV3_1G009830	Cucumber (Gy14) v2	cgybcucB011
CsaV3_1G009830	Cucumber (Gy14) v1	cgycucB237
CsaV3_1G009830	Cucurbita maxima (Rimu)	cmacucB0078
CsaV3_1G009830	Cucurbita maxima (Rimu)	cmacucB0124
CsaV3_1G009830	Cucurbita maxima (Rimu)	cmacucB0474
CsaV3_1G009830	Cucurbita moschata (Rifu)	cmocucB0066
CsaV3_1G009830	Cucurbita moschata (Rifu)	cmocucB0110
CsaV3_1G009830	Cucurbita moschata (Rifu)	cmocucB0457
CsaV3_1G009830	Cucurbita pepo (Zucchini)	cpecucB0439
CsaV3_1G009830	Cucurbita pepo (Zucchini)	cpecucB0808
CsaV3_1G009830	Wild cucumber (PI 183967)	cpicucB015
CsaV3_1G009830	Bottle gourd (USVL1VR-Ls)	cuclsiB077
CsaV3_1G009830	Melon (DHL92) v3.5.1	cucmeB051
CsaV3_1G009830	Melon (DHL92) v3.6.1	cucmedB048
CsaV3_1G009830	Watermelon (Charleston Gray)	cucwcgB080
CsaV3_1G009830	Watermelon (97103) v1	cucwmB098
CsaV3_1G009830	Watermelon (97103) v2	cucwmbB071
CsaV3_1G009830	Cucumber (Chinese Long) v3	cuccucB003