CsGy1G009790 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G009790
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	auxin-responsive protein SAUR71-like
Location	Chr1 : 6067203 .. 6067706 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGGATGAAGAAAAAGTGGAGTAAGTATATGGGTTTGAAGGGATTGGGGCGGAGCCGATCGGTGACCGGAGGAACAGCGGTCGGACCGGAAGGTATGTCGAAAAAGAGCAAATCTTTGAACAGTGGTCCGAAATATAAAACACCGGTGGCTCCGGACGGTTGTTTTGCTGTGTATGTGGGAGCGGAACGGCAACGGTTTGTTGTGAGAACGGAATTTGCGAATCATCCTTTATTTCAGATGCTGCTAGAAGATGCGGAGGTGGAATATGGGTATAACAGTCAAGGCCCTATTTTGCTTCCTTGTGAAGTTGGGATGTTTTATAATGTGTTGGCGGAGATGGACGACGGCGGCGATGGGATTAGCAACCGTTGGACAGGTGGAGAAAGCGGTGGTTTAATTGCTTGTAGCCCACTTCGGCTGACTAGTTGTGGTAGTAGAAATGGCGGTGGGTATAGGGTGTTGAGTCCGTCATCGATGCTTAAATTAAATGGACTTTGA

mRNA sequence

ATGGAGGGGATGAAGAAAAAGTGGAGTAAGTATATGGGTTTGAAGGGATTGGGGCGGAGCCGATCGGTGACCGGAGGAACAGCGGTCGGACCGGAAGGTATGTCGAAAAAGAGCAAATCTTTGAACAGTGGTCCGAAATATAAAACACCGGTGGCTCCGGACGGTTGTTTTGCTGTGTATGTGGGAGCGGAACGGCAACGGTTTGTTGTGAGAACGGAATTTGCGAATCATCCTTTATTTCAGATGCTGCTAGAAGATGCGGAGGTGGAATATGGGTATAACAGTCAAGGCCCTATTTTGCTTCCTTGTGAAGTTGGGATGTTTTATAATGTGTTGGCGGAGATGGACGACGGCGGCGATGGGATTAGCAACCGTTGGACAGGTGGAGAAAGCGGTGGTTTAATTGCTTGTAGCCCACTTCGGCTGACTAGTTGTGGTAGTAGAAATGGCGGTGGGTATAGGGTGTTGAGTCCGTCATCGATGCTTAAATTAAATGGACTTTGA

Coding sequence (CDS)

ATGGAGGGGATGAAGAAAAAGTGGAGTAAGTATATGGGTTTGAAGGGATTGGGGCGGAGCCGATCGGTGACCGGAGGAACAGCGGTCGGACCGGAAGGTATGTCGAAAAAGAGCAAATCTTTGAACAGTGGTCCGAAATATAAAACACCGGTGGCTCCGGACGGTTGTTTTGCTGTGTATGTGGGAGCGGAACGGCAACGGTTTGTTGTGAGAACGGAATTTGCGAATCATCCTTTATTTCAGATGCTGCTAGAAGATGCGGAGGTGGAATATGGGTATAACAGTCAAGGCCCTATTTTGCTTCCTTGTGAAGTTGGGATGTTTTATAATGTGTTGGCGGAGATGGACGACGGCGGCGATGGGATTAGCAACCGTTGGACAGGTGGAGAAAGCGGTGGTTTAATTGCTTGTAGCCCACTTCGGCTGACTAGTTGTGGTAGTAGAAATGGCGGTGGGTATAGGGTGTTGAGTCCGTCATCGATGCTTAAATTAAATGGACTTTGA

Protein sequence

MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGDGISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL

Homology

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BLAST of CsGy1G009790 vs. NCBI nr
Match: XP_004153127.2 (PREDICTED: uncharacterized protein LOC101220090 [Cucumis sativus] >KGN64431.1 hypothetical protein Csa_1G051690 [Cucumis sativus])

HSP 1 Score: 344.0 bits (881), Expect = 2.9e-91
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY
Sbjct: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD
Sbjct: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 168
           GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL
Sbjct: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 167

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BLAST of CsGy1G009790 vs. NCBI nr
Match: XP_008446293.1 (PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo])

HSP 1 Score: 304.7 bits (779), Expect = 2.0e-79
Identity = 154/167 (92.22%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKYMGLKGLGRSRSVTGGTAV   GMSKKSKS NSG KYKTPVAPDGCFAVY
Sbjct: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAV---GMSKKSKSWNSGSKYKTPVAPDGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMD GGD
Sbjct: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDGGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 168
           G+S+RWTGGESG    CSPLRLTSCGSRNG GYRVLSPSSMLKLNGL
Sbjct: 121 GLSSRWTGGESG----CSPLRLTSCGSRNGVGYRVLSPSSMLKLNGL 160

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BLAST of CsGy1G009790 vs. NCBI nr
Match: XP_023000946.1 (auxin-responsive protein SAUR71-like [Cucurbita maxima])

HSP 1 Score: 270.8 bits (691), Expect = 3.1e-69
Identity = 133/167 (79.64%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEG KKKWSK+M  KGL RSRSV G T VGP+   KKSK   SG K K PVAP+GCFAVY
Sbjct: 1   MEGTKKKWSKHMSFKGLVRSRSVAGKTGVGPDDAKKKSKFWRSGAKLKHPVAPEGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VG ER+RFVV+TEFANHPLFQMLLEDAE EYGYNSQGPI LPCEVG+FYNVLAEM DGGD
Sbjct: 61  VGPERERFVVKTEFANHPLFQMLLEDAEEEYGYNSQGPIWLPCEVGLFYNVLAEM-DGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 168
           G+ NRW GG+SGG +ACSPLRLTSCGSR+ GGYRVLSPSSMLKLNGL
Sbjct: 121 GLRNRWMGGQSGGFLACSPLRLTSCGSRHDGGYRVLSPSSMLKLNGL 166

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BLAST of CsGy1G009790 vs. NCBI nr
Match: XP_022923944.1 (auxin-responsive protein SAUR71-like [Cucurbita moschata])

HSP 1 Score: 268.1 bits (684), Expect = 2.0e-68
Identity = 132/167 (79.04%), Postives = 142/167 (85.03%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           ME   KKWSK+M  KGL RSRSV G T VGP+   KKSK   SG K K PVAP+GCFAVY
Sbjct: 1   MEATNKKWSKHMSFKGLVRSRSVAGKTGVGPDDAKKKSKFWRSGAKLKHPVAPEGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VG ER+RFVV+TEFANHPLFQMLLEDAE EYGYNSQGPI LPCEVG+FYNVLAEM DGGD
Sbjct: 61  VGPERERFVVKTEFANHPLFQMLLEDAEEEYGYNSQGPIWLPCEVGLFYNVLAEM-DGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 168
           G+ NRW GG+SGGL+ACSPLRLTSCGSR+ GGYRVLSPSSMLKLNGL
Sbjct: 121 GLRNRWMGGQSGGLLACSPLRLTSCGSRHDGGYRVLSPSSMLKLNGL 166

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BLAST of CsGy1G009790 vs. NCBI nr
Match: XP_023519028.1 (auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 4.5e-68
Identity = 131/167 (78.44%), Postives = 142/167 (85.03%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           ME  K KWSK+M  KGL RSRSV G T VGP+   KKSK   SG K + PVAP+GCFAVY
Sbjct: 1   MEATKNKWSKHMSFKGLVRSRSVAGKTGVGPDDAKKKSKFWRSGAKLRHPVAPEGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VG ER+RFVV+TEFANHPLFQMLLEDAE EYGYNSQGPI LPCEVG+FYNVLAEM DGGD
Sbjct: 61  VGPERERFVVKTEFANHPLFQMLLEDAEEEYGYNSQGPIWLPCEVGLFYNVLAEM-DGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 168
           G+ NRW GG+SGGL+ACSPLRLTSCGSR+ GGYRVLSPSSMLKLNGL
Sbjct: 121 GLRNRWMGGQSGGLLACSPLRLTSCGSRHDGGYRVLSPSSMLKLNGL 166

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BLAST of CsGy1G009790 vs. TAIR10
Match: AT5G50760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-19
Identity = 55/141 (39.01%), Postives = 69/141 (48.94%), Query Frame = 0


Query: 37  KSKSLNSGPKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQ 96
           KS      PK ++P    G F VYVG  +QR VV+T+  NHPLF+ LLEDAE EYGY   
Sbjct: 42  KSNESKGKPKKESP--SHGFFTVYVGPTKQRIVVKTKLLNHPLFKNLLEDAETEYGYRRD 101

Query: 97  GPILLPCEVGMFYNVLAEMDDGGDGISNRWTGGESGGL-------IACSPLRLTSCG--- 156
           GPI+LPCEV  F+  LA+M        +        G          CSP R    G   
Sbjct: 102 GPIVLPCEVDFFFKALADMKSNPGHHDHXXXXXXXXGFTNSPICGFVCSPYRSYGGGVTD 161

Query: 157 ---SRNGGGYRVLSPSSMLKL 165
               +  G Y++L   S+ KL
Sbjct: 162 PLAMKRNGSYKLLRSPSLFKL 180

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BLAST of CsGy1G009790 vs. TAIR10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 71.6 bits (174), Expect = 5.1e-13
Identity = 44/135 (32.59%), Postives = 65/135 (48.15%), Query Frame = 0


Query: 35  SKKSKSLNSGPKYKTPVAPDGCFAVYVGA---ERQRFVVRTEFANHPLFQMLLEDAEVEY 94
           S +  ++ S  K+     P GC A+ VG+   E+QRFVV   + NHPLF  LL +AE EY
Sbjct: 13  SNRPNNVKSNSKHGIKDVPKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEY 72

Query: 95  GYNSQGPILLPCEVGMF------YNVLAEMDDGGDGISNRWTGGESGGLIACSPLRLTSC 154
           G+  +G I +PC V +F       N    +DD  D                    + T C
Sbjct: 73  GFEQKGTITIPCHVEVFRYVQDMINRERSLDDDDDA------------------SKQTGC 129

Query: 155 GSRNGGGYRVLSPSS 161
           G+++G  +++ S SS
Sbjct: 133 GAKHGLTHKIRSRSS 129

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BLAST of CsGy1G009790 vs. TAIR10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 37  KSKSLNSGPKYKTPVAPDGCFAVYVGA---ERQRFVVRTEFANHPLFQMLLEDAEVEYGY 96
           KS  L+     K    P GC A+ VG+   E+QRF+V   + NHPLF  LL++AE EYG+
Sbjct: 9   KSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGF 68

Query: 97  NSQGPILLPCEVGMFYNVLAEMD 117
           + +G I +PC V  F  V A +D
Sbjct: 69  DQKGTITIPCHVEEFRYVQALID 91

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BLAST of CsGy1G009790 vs. TAIR10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 50  PVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFY 109
           P  P G  AVYVG E +RF++ T F +H LF++LLE AE EYG++  G + +PCEV  F 
Sbjct: 77  PDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFK 136

Query: 110 NVL 113
            +L
Sbjct: 137 YLL 139

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BLAST of CsGy1G009790 vs. TAIR10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-12
Identity = 37/100 (37.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 17  LGRSRSVTGGTAVGPEGMSKK-SKSLNSGPKYKTPVA--PDGCFAVYVGAERQRFVVRTE 76
           +G++  +  G+ V    M K+  K  + G     PV+  P G  AV VG  R+R+VVR +
Sbjct: 1   MGKNNKI--GSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAK 60

Query: 77  FANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLA 114
             NHP+F+ LL +AE EYG+ + GP+ +PC+  +F +++A
Sbjct: 61  HLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIA 98

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BLAST of CsGy1G009790 vs. Swiss-Prot
Match: sp|Q9ZUZ3|SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 37  KSKSLNSGPKYKTPVAPDGCFAVYVGA---ERQRFVVRTEFANHPLFQMLLEDAEVEYGY 96
           KS  L+     K    P GC A+ VG+   E+QRF+V   + NHPLF  LL++AE EYG+
Sbjct: 9   KSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGF 68

Query: 97  NSQGPILLPCEVGMFYNVLAEMD 117
           + +G I +PC V  F  V A +D
Sbjct: 69  DQKGTITIPCHVEEFRYVQALID 91

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BLAST of CsGy1G009790 vs. Swiss-Prot
Match: sp|Q9SGU2|SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = 0


Query: 35  SKKSKSLNSGPKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYN 94
           S+  +      K+K+ V P+G   VYVG E +RFVV  E  NHP+F  LL+ +  EYGY 
Sbjct: 22  SESQRGRTKKEKHKSWV-PEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYE 81

Query: 95  SQGPILLPCEVGMFYNVLAEM 116
            QG + +PC V +F  +L  +
Sbjct: 82  QQGVLRIPCHVLVFERILESL 101

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BLAST of CsGy1G009790 vs. Swiss-Prot
Match: sp|Q9LTV3|SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 40  SLNSGPKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPI 99
           S+    K +T   P+G   VYVG E +RFVV  E  NHP+F  LL  +  EYGY  +G +
Sbjct: 38  SVTRRSKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVL 97

Query: 100 LLPCEVGMFYNVLAEM 116
            +PC V +F  ++  +
Sbjct: 98  QIPCHVLVFERIMESL 113

[Close]

BLAST of CsGy1G009790 vs. Swiss-Prot
Match: sp|Q9SA49|SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 31/75 (41.33%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 45  PKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCE 104
           P  +    P G   VYVG E +RFVV  E  NHP+F  LL  +  EYGY  +G + +PC 
Sbjct: 47  PARRVNTVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCH 106

Query: 105 VGMFYNVLAEMDDGG 120
           V +F  V+  +  GG
Sbjct: 107 VIVFERVVETLRLGG 121

[Close]

BLAST of CsGy1G009790 vs. Swiss-Prot
Match: sp|O64538|SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-08
Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 53  PDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVL 112
           P G   V VG +++RFVV  E  NHP+F  LL  +  EYGY  +G + +PC V +F  V+
Sbjct: 49  PSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVV 108

Query: 113 AEMDDG 119
             +  G
Sbjct: 109 ESLRSG 114

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BLAST of CsGy1G009790 vs. TrEMBL
Match: tr|A0A0A0LWR6|A0A0A0LWR6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051690 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.9e-91
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY
Sbjct: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD
Sbjct: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 168
           GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL
Sbjct: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 167

[Close]

BLAST of CsGy1G009790 vs. TrEMBL
Match: tr|A0A1S3BEQ2|A0A1S3BEQ2_CUCME (auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103489067 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.3e-79
Identity = 154/167 (92.22%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVY 60
           MEGMKKKWSKYMGLKGLGRSRSVTGGTAV   GMSKKSKS NSG KYKTPVAPDGCFAVY
Sbjct: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAV---GMSKKSKSWNSGSKYKTPVAPDGCFAVY 60

Query: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGD 120
           VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMD GGD
Sbjct: 61  VGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDGGGD 120

Query: 121 GISNRWTGGESGGLIACSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 168
           G+S+RWTGGESG    CSPLRLTSCGSRNG GYRVLSPSSMLKLNGL
Sbjct: 121 GLSSRWTGGESG----CSPLRLTSCGSRNGVGYRVLSPSSMLKLNGL 160

[Close]

BLAST of CsGy1G009790 vs. TrEMBL
Match: tr|A0A2P4I7H6|A0A2P4I7H6_QUESU (Auxin-responsive protein saur32 OS=Quercus suber OX=58331 GN=CFP56_36764 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.0e-35
Identity = 94/186 (50.54%), Postives = 108/186 (58.06%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSG---------------- 60
           M+ MK+KW K + +K   R +S  GG             SL                   
Sbjct: 1   MDVMKEKWKKNLIVKTWERCKSFGGGNKQXXXXXDDNINSLTKSRSWSYDHTKPSDKEER 60

Query: 61  -PKYKTPVAPDGCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPC 120
             K K  VAPDGCF+VYVG  +QRFVV+TEFANHPLFQMLLEDAE+EYGYNSQGPILLPC
Sbjct: 61  QQKKKCKVAPDGCFSVYVGPLKQRFVVKTEFANHPLFQMLLEDAELEYGYNSQGPILLPC 120

Query: 121 EVGMFYNVLAEMDDGGDGISNRWTGGESGGLIACSPLRLTSCGSRN--GGGYRVLSPSSM 168
           EV +FY VLAEMD G +             LI  SP R +  G  N  GGGYR+LSPS M
Sbjct: 121 EVDLFYKVLAEMDCGEEARLGCNFAKGCSPLILRSPARRSGSGDYNGCGGGYRLLSPSRM 180

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BLAST of CsGy1G009790 vs. TrEMBL
Match: tr|A0A2P5FD64|A0A2P5FD64_9ROSA (Small auxin-up RNA OS=Trema orientalis OX=63057 GN=TorRG33x02_085470 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.5e-32
Identity = 84/174 (48.28%), Postives = 113/174 (64.94%), Query Frame = 0


Query: 1   MEGMKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMS---KKSKSLNSGP---KYKTPVAPD 60
           M+ +K+KW K + +K  G  +S   G       +    K+S +++      + K+ VAPD
Sbjct: 1   MDMVKEKWKKNLIVKAWGSCKSFGAGFRSNNSNIKASLKRSFTVDGDQGRWRGKSHVAPD 60

Query: 61  GCFAVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAE 120
           GCF+VYVG E+QRFVVR EFANHPLF+MLLEDAE+EYG+NSQGPI+LPC+V +FY VLAE
Sbjct: 61  GCFSVYVGPEKQRFVVRAEFANHPLFRMLLEDAEMEYGFNSQGPIMLPCDVVLFYKVLAE 120

Query: 121 MDDGGDGISNRWTGGESGGLIACSPLRLTSCGSRNG-GGYRVLSPSSMLKLNGL 168
           M+  GD +     G  S      + LR  + G  +G G YR+LSPS +LK+N L
Sbjct: 121 MESSGDDVMIS-GGASSSPSCGFAMLRSPNNGFGHGYGAYRLLSPSRLLKINHL 173

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BLAST of CsGy1G009790 vs. TrEMBL
Match: tr|A0A2P5DV95|A0A2P5DV95_PARAD (Small auxin-up RNA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_028450 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.2e-31
Identity = 81/171 (47.37%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 4   MKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMS---KKSKSLNSGP---KYKTPVAPDGCF 63
           +K+KW K +  K  GR +S   G       +    K+S +++      + K+ VAP+GCF
Sbjct: 2   VKEKWKKNLIAKAWGRCKSFGAGFRSNNNNIKASLKRSFTVDGDQGRWRRKSHVAPEGCF 61

Query: 64  AVYVGAERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDD 123
           +VYVG E+QRF+VR EFANHPLF+MLLEDAE+EYG+NSQGPI+LPC+V +FY VLAEM+ 
Sbjct: 62  SVYVGPEKQRFMVRAEFANHPLFRMLLEDAEMEYGFNSQGPIMLPCDVVLFYKVLAEMES 121

Query: 124 GGDGISNRWTGGESGGLIACSPLRLTSCGSRNG-GGYRVLSPSSMLKLNGL 168
            GD + +   G  S      + LR  + G  +G G Y++LSPS +LK+N L
Sbjct: 122 SGDDVVS--GGASSSPSCGFAMLRSPNNGFGHGYGAYKLLSPSRLLKINHL 170

The following BLAST results are available for this feature:

BLAST of CsGy1G009790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153127.2	2.9e-91	100.00	PREDICTED: uncharacterized protein LOC101220090 [Cucumis sativus] >KGN64431.1 hy...	[more]
XP_008446293.1	2.0e-79	92.22	PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo]	[more]
XP_023000946.1	3.1e-69	79.64	auxin-responsive protein SAUR71-like [Cucurbita maxima]	[more]
XP_022923944.1	2.0e-68	79.04	auxin-responsive protein SAUR71-like [Cucurbita moschata]	[more]
XP_023519028.1	4.5e-68	78.44	auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G009790 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50760.1	1.6e-19	39.01	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	5.1e-13	32.59	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	1.1e-12	43.37	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	1.1e-12	49.21	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	2.5e-12	37.00	SAUR-like auxin-responsive protein family	[more]

BLAST of CsGy1G009790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZUZ3\|SAU32_ARATH	2.0e-11	43.37	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
sp\|Q9SGU2\|SAU71_ARATH	1.3e-10	40.74	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
sp\|Q9LTV3\|SAU72_ARATH	1.1e-09	39.47	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 S...	[more]
sp\|Q9SA49\|SAU41_ARATH	1.9e-09	41.33	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
sp\|O64538\|SAU40_ARATH	2.1e-08	40.91	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]

BLAST of CsGy1G009790 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LWR6\|A0A0A0LWR6_CUCSA	1.9e-91	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051690 PE=4 SV=1	[more]
tr\|A0A1S3BEQ2\|A0A1S3BEQ2_CUCME	1.3e-79	92.22	auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103489067 PE=...	[more]
tr\|A0A2P4I7H6\|A0A2P4I7H6_QUESU	2.0e-35	50.54	Auxin-responsive protein saur32 OS=Quercus suber OX=58331 GN=CFP56_36764 PE=4 SV...	[more]
tr\|A0A2P5FD64\|A0A2P5FD64_9ROSA	3.5e-32	48.28	Small auxin-up RNA OS=Trema orientalis OX=63057 GN=TorRG33x02_085470 PE=4 SV=1	[more]
tr\|A0A2P5DV95\|A0A2P5DV95_PARAD	2.2e-31	47.37	Small auxin-up RNA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_028450 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G009790.1	CsGy1G009790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 40..113 e-value: 6.0E-24 score: 83.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..46
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 3..162
None	No IPR available	PANTHER	PTHR31374:SF10	SUBFAMILY NOT NAMED	coord: 3..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G009790	Cla002638	Watermelon (97103) v1	cgybwmB010
CsGy1G009790	Csa1G051690	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G009790	MELO3C002378	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G009790	ClCG03G003940	Watermelon (Charleston Gray)	cgybwcgB033
CsGy1G009790	CSPI01G09770	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G009790	CmaCh13G008220	Cucurbita maxima (Rimu)	cgybcmaB063
CsGy1G009790	CmoCh13G008530	Cucurbita moschata (Rifu)	cgybcmoB058
CsGy1G009790	Lsi02G005210	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G009790	Cp4.1LG09g09450	Cucurbita pepo (Zucchini)	cgybcpeB018
CsGy1G009790	Cp4.1LG20g02870	Cucurbita pepo (Zucchini)	cgybcpeB080
CsGy1G009790	MELO3C002378.2	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G009790	CsaV3_1G009830	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G009790	Cla97C03G055090	Watermelon (97103) v2	cgybwmbB032
CsGy1G009790	Bhi08G001249	Wax gourd	cgybwgoB029
CsGy1G009790	Carg07615	Silver-seed gourd	carcgybB0989
CsGy1G009790	Carg06809	Silver-seed gourd	carcgybB0500

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G009790	Cucumber (Chinese Long) v3	cgybcucB010
CsGy1G009790	Watermelon (97103) v2	cgybwmbB070
CsGy1G009790	Cucumber (Gy14) v2	cgybcgybB005
CsGy1G009790	Cucurbita maxima (Rimu)	cgybcmaB025
CsGy1G009790	Cucurbita maxima (Rimu)	cgybcmaB049
CsGy1G009790	Cucurbita maxima (Rimu)	cgybcmaB093
CsGy1G009790	Cucurbita moschata (Rifu)	cgybcmoB026
CsGy1G009790	Cucurbita moschata (Rifu)	cgybcmoB046
CsGy1G009790	Cucurbita moschata (Rifu)	cgybcmoB082
CsGy1G009790	Cucurbita pepo (Zucchini)	cgybcpeB049
CsGy1G009790	Cucurbita pepo (Zucchini)	cgybcpeB123
CsGy1G009790	Cucumber (Chinese Long) v2	cgybcuB014
CsGy1G009790	Bottle gourd (USVL1VR-Ls)	cgyblsiB064
CsGy1G009790	Melon (DHL92) v3.5.1	cgybmeB046
CsGy1G009790	Melon (DHL92) v3.6.1	cgybmedB041
CsGy1G009790	Watermelon (Charleston Gray)	cgybwcgB069
CsGy1G009790	Watermelon (97103) v1	cgybwmB087
CsGy1G009790	Wild cucumber (PI 183967)	cgybcpiB013
CsGy1G009790	Silver-seed gourd	carcgybB0373