ClCG03G003940 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G003940
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	SAUR-like auxin-responsive protein family LENGTH=183
Location	CG_Chr03 : 4272418 .. 4272915 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAAAGTGGAGTAAGTATTTGGGTTTGAAAGGTTTGGGCCGGAGTCGATCGGTGGCCGGAAAAACCACGGTCGGACCGGGAGGTATGACGAAAAAGAGCAAATCTTGGAACACTAGCTCCTATTTCAAAACCCCGGTCGCTCCGGACGGTTGTTTCGCCGTGTATGTCGGACCGGAAAGGCAACGGTTTGTTGTGAAAGCTAAATTTGCTAATCATCCGTTGTTTCAGACGCTTCTAGAAGATGCTGAGGTGGAATATGGGTATAATAGTCAAGGCCCAATTTTGCTTCCTTGTGAAGTTGGGATGTTTTATCACGTGTTGGCGGAGATGGACGGCGGCGATGGGCTCAGCAACCGTTCCACGGCTGGAGAGAACGGCGGTGTAATTGCTTGTAGTTGTAGCCCACTTCGGCTGACCAGCTACGGCAGTAGAAATAGCGGTGGTTACCGGGTGTTAAGTCCGTCGTCGATGCTTAAATTAAACCATCTTTGA

mRNA sequence

ATGAAGAAAAAGTGGAGTAAGTATTTGGGTTTGAAAGGTTTGGGCCGGAGTCGATCGGTGGCCGGAAAAACCACGGTCGGACCGGGAGGTATGACGAAAAAGAGCAAATCTTGGAACACTAGCTCCTATTTCAAAACCCCGGTCGCTCCGGACGGTTGTTTCGCCGTGTATGTCGGACCGGAAAGGCAACGGTTTGTTGTGAAAGCTAAATTTGCTAATCATCCGTTGTTTCAGACGCTTCTAGAAGATGCTGAGGTGGAATATGGGTATAATAGTCAAGGCCCAATTTTGCTTCCTTGTGAAGTTGGGATGTTTTATCACGTGTTGGCGGAGATGGACGGCGGCGATGGGCTCAGCAACCGTTCCACGGCTGGAGAGAACGGCGGTGTAATTGCTTGTAGTTGTAGCCCACTTCGGCTGACCAGCTACGGCAGTAGAAATAGCGGTGGTTACCGGGTGTTAAGTCCGTCGTCGATGCTTAAATTAAACCATCTTTGA

Coding sequence (CDS)

ATGAAGAAAAAGTGGAGTAAGTATTTGGGTTTGAAAGGTTTGGGCCGGAGTCGATCGGTGGCCGGAAAAACCACGGTCGGACCGGGAGGTATGACGAAAAAGAGCAAATCTTGGAACACTAGCTCCTATTTCAAAACCCCGGTCGCTCCGGACGGTTGTTTCGCCGTGTATGTCGGACCGGAAAGGCAACGGTTTGTTGTGAAAGCTAAATTTGCTAATCATCCGTTGTTTCAGACGCTTCTAGAAGATGCTGAGGTGGAATATGGGTATAATAGTCAAGGCCCAATTTTGCTTCCTTGTGAAGTTGGGATGTTTTATCACGTGTTGGCGGAGATGGACGGCGGCGATGGGCTCAGCAACCGTTCCACGGCTGGAGAGAACGGCGGTGTAATTGCTTGTAGTTGTAGCCCACTTCGGCTGACCAGCTACGGCAGTAGAAATAGCGGTGGTTACCGGGTGTTAAGTCCGTCGTCGATGCTTAAATTAAACCATCTTTGA

Protein sequence

MKKKWSKYLGLKGLGRSRSVAGKTTVGPGGMTKKSKSWNTSSYFKTPVAPDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPCEVGMFYHVLAEMDGGDGLSNRSTAGENGGVIACSCSPLRLTSYGSRNSGGYRVLSPSSMLKLNHL

Homology

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BLAST of ClCG03G003940 vs. Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 40/98 (40.82%), Postives = 53/98 (54.08%), Query Frame = 1


Query: 26  VGPGGMTKKSKSWNTSSYFKTPVAPDGCFAVYVGP---ERQRFVVKAKFANHPLFQTLLE 85
           +G G  T KS   +     K    P GC A+ VG    E+QRF+V   + NHPLF  LL+
Sbjct: 1   MGTGEKTLKSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLK 60

Query: 86  DAEVEYGYNSQGPILLPCEVGMFYHVLAEMDGGDGLSN 121
           +AE EYG++ +G I +PC V  F +V A +DG   + N
Sbjct: 61  EAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYN 98

[Close]

BLAST of ClCG03G003940 vs. Swiss-Prot
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.8e-11
Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = 1


Query: 16  RSRSVAGKTTVGPGGMTKKSKSWNTSSYFKTPVAPDGCFAVYVGPERQRFVVKAKFANHP 75
           RS S  G+T        +K KSW           P+G   VYVG E +RFVV A+  NHP
Sbjct: 21  RSESQRGRTK------KEKHKSW----------VPEGHVPVYVGHEMERFVVNAELLNHP 80

Query: 76  LFQTLLEDAEVEYGYNSQGPILLPCEVGMFYHVLAEMDGGDGLSNRST 124
           +F  LL+ +  EYGY  QG + +PC V +F  +L  +    GL++R T
Sbjct: 81  VFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESL--RLGLADRVT 110

[Close]

BLAST of ClCG03G003940 vs. Swiss-Prot
Match: SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.0e-09
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 1


Query: 31  MTKKSKSWNTSSYFKTPVAPDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGY 90
           +T++SK   +S        P+G   VYVG E +RFVV A+  NHP+F  LL  +  EYGY
Sbjct: 39  VTRRSKKQTSS-------VPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGY 98

Query: 91  NSQGPILLPCEVGMFYHVLAEM 113
             +G + +PC V +F  ++  +
Sbjct: 99  EQKGVLQIPCHVLVFERIMESL 113

[Close]

BLAST of ClCG03G003940 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 31/77 (40.26%), Postives = 41/77 (53.25%), Query Frame = 1


Query: 33  KKSKSWNTSSYFKTPVAPDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGY-N 92
           +K+ S    +  K   AP G  AVYVG   +RFV+     N PLFQ LL  AE E+GY +
Sbjct: 9   RKTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDH 68

Query: 93  SQGPILLPCEVGMFYHV 109
             G + +PC   +F H+
Sbjct: 69  PMGGLTIPCSEDLFQHI 85

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BLAST of ClCG03G003940 vs. Swiss-Prot
Match: SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08
Identity = 33/88 (37.50%), Postives = 42/88 (47.73%), Query Frame = 1


Query: 38  WNTSSYFKTPVAPDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPIL 97
           W+     +    P G   VYVG E +RFVV A+  NHP+F  LL  +  EYGY  +G + 
Sbjct: 43  WSICPARRVNTVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLH 102

Query: 98  LPCEVGMFYHV-----LAEMDGGDGLSN 121
           +PC V +F  V     L   +G   L N
Sbjct: 103 IPCHVIVFERVVETLRLGGFEGSGDLEN 130

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BLAST of ClCG03G003940 vs. TrEMBL
Match: A0A0A0LWR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051690 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.8e-70
Identity = 137/166 (82.53%), Postives = 147/166 (88.55%), Query Frame = 1


Query: 1   MKKKWSKYLGLKGLGRSRSVAGKTTVGPGGMTKKSKSWNTSSYFKTPVAPDGCFAVYVGP 60
           MKKKWSKY+GLKGLGRSRSV G T VGP GM+KKSKS N+   +KTPVAPDGCFAVYVG 
Sbjct: 4   MKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVYVGA 63

Query: 61  ERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPCEVGMFYHVLAEM-DGGDGLS 120
           ERQRFVV+ +FANHPLFQ LLEDAEVEYGYNSQGPILLPCEVGMFY+VLAEM DGGDG+S
Sbjct: 64  ERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGDGIS 123

Query: 121 NRSTAGENGGVIACSCSPLRLTSYGSRNSGGYRVLSPSSMLKLNHL 166
           NR T GE+GG+IA  CSPLRLTS GSRN GGYRVLSPSSMLKLN L
Sbjct: 124 NRWTGGESGGLIA--CSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 167

[Close]

BLAST of ClCG03G003940 vs. TrEMBL
Match: A0A067FE70_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029186mg PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.2e-32
Identity = 86/198 (43.43%), Postives = 113/198 (57.07%), Query Frame = 1


Query: 1   MKKKWSKYLGLKGLGRSRSVAGKTTVGPGG-------------MTKKSKSWNTSSYFKT- 60
           +K+KW K L LK   R +S+   ++ G G              M  KSKSW++S      
Sbjct: 4   VKQKWKKNLILKTWERCKSLGSSSSSGSGSGSSSNNKKPSCVMMMIKSKSWSSSPERNNN 63

Query: 61  ------PVAPDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPC 120
                  VAP+GCF+VYVGP+RQRFV+K +FANHPLF+ LLEDAE EYGY +QGPI+LPC
Sbjct: 64  YNNKGCQVAPEGCFSVYVGPQRQRFVIKTEFANHPLFKILLEDAESEYGYENQGPIMLPC 123

Query: 121 EVGMFYHVLAEMDG-GDGLSNRSTAGENGGVIACSCSPLRLTS--------------YGS 164
           +V +F+ VLAE++  GD   +   A +        CSPL L S              YG+
Sbjct: 124 DVDLFFKVLAELESTGDEDDDHDIANKG------CCSPLVLCSSPARRPNHRISSKDYGA 183

[Close]

BLAST of ClCG03G003940 vs. TrEMBL
Match: A0A061FZ72_THECC (Calmodulin binding protein, putative OS=Theobroma cacao GN=TCM_014696 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.7e-31
Identity = 81/178 (45.51%), Postives = 113/178 (63.48%), Query Frame = 1


Query: 1   MKKKWSKYLGLKGLGR--SRSVAGKTTVGPG-GMTKKSKSWNTSSYFKTP---------- 60
           +K KW K +  +   R  S    GK + G      +KSKSW++++   +           
Sbjct: 4   VKMKWKKNVLFRAWERCWSLGTGGKKSSGTSCDALRKSKSWHSTTTRSSSLEEDEGKKRR 63

Query: 61  -VAPDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPCEVGMFY 120
            VAP+GCF+VYVGP+RQRFVVK +FANHPLF+ LLEDAE+EYG++S+GP+LLPC+V +FY
Sbjct: 64  QVAPEGCFSVYVGPQRQRFVVKTEFANHPLFKMLLEDAELEYGFSSEGPLLLPCDVDLFY 123

Query: 121 HVLAEMDGGDGLSNRSTAGENGGVIACSCSPLRLTSYG-SRNSGGYRVLSPSSMLKLN 164
            VLAEMDGG  +S       +  ++   CSP R  S   ++  G Y++L+PS +LKLN
Sbjct: 124 KVLAEMDGGKEISPVRGFAYSPLIL---CSPSRRQSSSINKGYGSYKLLTPSRLLKLN 178

[Close]

BLAST of ClCG03G003940 vs. TrEMBL
Match: K4C8Y5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-30
Identity = 75/138 (54.35%), Postives = 95/138 (68.84%), Query Frame = 1


Query: 31  MTKKSKSWNTSSYFKTPV--APDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEY 90
           M  KSKSW+ SS  K+PV  AP GCF VYVGPE+++F +KAK+ANHPLF+ LLEDAE+EY
Sbjct: 34  MLSKSKSWHGSSKTKSPVVLAPQGCFCVYVGPEKEKFTIKAKYANHPLFKMLLEDAEMEY 93

Query: 91  GYNSQGPILLPCEVGMFYHVLAEMDGGDGLSNRSTAGENGGVIACS-CSPLRLTSYG--S 150
           GY SQGPILLPC+V +F+ VL +MD     S R   G   G+ +CS  SP R+  +G   
Sbjct: 94  GYCSQGPILLPCDVNLFHKVLGQMD-----SEREINGPGCGLASCSPFSPARVLGHGEMG 153

Query: 151 RNSGGYRVLSPSSMLKLN 164
           +  G Y +L+   MLKLN
Sbjct: 154 KGYGSYGLLTTPRMLKLN 166

[Close]

BLAST of ClCG03G003940 vs. TrEMBL
Match: V4VCR9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033363mg PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-30
Identity = 85/200 (42.50%), Postives = 112/200 (56.00%), Query Frame = 1


Query: 1   MKKKWSKYLGLKGLGRSRSVAGKTTVGPGG---------------MTKKSKSWNTSSYFK 60
           +K+KW K L LK   R +S+   ++ G G                M  KSKSW++S    
Sbjct: 4   VKQKWKKNLILKTWERCKSLGSSSSSGSGSGSGSSSNNKKPSCVMMMIKSKSWSSSPERN 63

Query: 61  T-------PVAPDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILL 120
                    VAP+GCF+VYVGP+RQRFV+K +FANHPLF+ LLEDAE EYGY +QGPI+L
Sbjct: 64  NNYNNKGCQVAPEGCFSVYVGPQRQRFVIKTEFANHPLFKILLEDAESEYGYENQGPIML 123

Query: 121 PCEVGMFYHVLAEMDG-GDGLSNRSTAGENGGVIACSCSPLRLTS--------------Y 164
           PC+V +F+ VLAE++  GD   +   A +        CSPL L S              Y
Sbjct: 124 PCDVDLFFKVLAELESTGDEDDDHDIANKG------CCSPLVLCSSPARRPNHRISSKDY 183

[Close]

BLAST of ClCG03G003940 vs. TAIR10
Match: AT5G50760.1 (AT5G50760.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.0 bits (245), Expect = 2.9e-21
Identity = 55/125 (44.00%), Postives = 66/125 (52.80%), Query Frame = 1


Query: 52  GCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPCEVGMFYHVLAE 111
           G F VYVGP +QR VVK K  NHPLF+ LLEDAE EYGY   GPI+LPCEV  F+  LA+
Sbjct: 58  GFFTVYVGPTKQRIVVKTKLLNHPLFKNLLEDAETEYGYRRDGPIVLPCEVDFFFKALAD 117

Query: 112 MDGGDGLSNRSTAGE------NGGVIACSCSPLRLTSYGS--------RNSGGYRVLSPS 163
           M    G  +     +      N  +    CSP R  SYG         + +G Y++L   
Sbjct: 118 MKSNPGHHDHDDDYDDDDGFTNSPICGFVCSPYR--SYGGGVTDPLAMKRNGSYKLLRSP 177

[Close]

BLAST of ClCG03G003940 vs. TAIR10
Match: AT2G46690.1 (AT2G46690.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 74.3 bits (181), Expect = 7.7e-14
Identity = 40/98 (40.82%), Postives = 53/98 (54.08%), Query Frame = 1


Query: 26  VGPGGMTKKSKSWNTSSYFKTPVAPDGCFAVYVGP---ERQRFVVKAKFANHPLFQTLLE 85
           +G G  T KS   +     K    P GC A+ VG    E+QRF+V   + NHPLF  LL+
Sbjct: 1   MGTGEKTLKSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLK 60

Query: 86  DAEVEYGYNSQGPILLPCEVGMFYHVLAEMDGGDGLSN 121
           +AE EYG++ +G I +PC V  F +V A +DG   + N
Sbjct: 61  EAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYN 98

[Close]

BLAST of ClCG03G003940 vs. TAIR10
Match: AT3G43120.1 (AT3G43120.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 1


Query: 47  PVAPDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPCEVGMFY 106
           P  P G  AVYVGPE +RF++   F +H LF+ LLE AE EYG++  G + +PCEV  F 
Sbjct: 77  PDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFK 136

Query: 107 HVL 110
           ++L
Sbjct: 137 YLL 139

[Close]

BLAST of ClCG03G003940 vs. TAIR10
Match: AT1G56150.1 (AT1G56150.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 5.5e-12
Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = 1


Query: 16  RSRSVAGKTTVGPGGMTKKSKSWNTSSYFKTPVAPDGCFAVYVGPERQRFVVKAKFANHP 75
           RS S  G+T        +K KSW           P+G   VYVG E +RFVV A+  NHP
Sbjct: 21  RSESQRGRTK------KEKHKSW----------VPEGHVPVYVGHEMERFVVNAELLNHP 80

Query: 76  LFQTLLEDAEVEYGYNSQGPILLPCEVGMFYHVLAEMDGGDGLSNRST 124
           +F  LL+ +  EYGY  QG + +PC V +F  +L  +    GL++R T
Sbjct: 81  VFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESL--RLGLADRVT 110

[Close]

BLAST of ClCG03G003940 vs. TAIR10
Match: AT4G34750.1 (AT4G34750.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 67.8 bits (164), Expect = 7.2e-12
Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 1


Query: 36  KSWNTSSYFKT----PVA--PDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYG 95
           K W   ++  +    PV+  P G  AV VG  R+R+VV+AK  NHP+F+ LL +AE EYG
Sbjct: 18  KQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLNHPIFRRLLAEAEEEYG 77

Query: 96  YNSQGPILLPCEVGMFYHVLA 111
           + + GP+ +PC+  +F  ++A
Sbjct: 78  FANVGPLAIPCDESLFEDIIA 98

[Close]

BLAST of ClCG03G003940 vs. NCBI nr
Match: gi|778658187|ref|XP_004153127.2| (PREDICTED: uncharacterized protein LOC101220090 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 5.5e-70
Identity = 137/166 (82.53%), Postives = 147/166 (88.55%), Query Frame = 1


Query: 1   MKKKWSKYLGLKGLGRSRSVAGKTTVGPGGMTKKSKSWNTSSYFKTPVAPDGCFAVYVGP 60
           MKKKWSKY+GLKGLGRSRSV G T VGP GM+KKSKS N+   +KTPVAPDGCFAVYVG 
Sbjct: 4   MKKKWSKYMGLKGLGRSRSVTGGTAVGPEGMSKKSKSLNSGPKYKTPVAPDGCFAVYVGA 63

Query: 61  ERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPCEVGMFYHVLAEM-DGGDGLS 120
           ERQRFVV+ +FANHPLFQ LLEDAEVEYGYNSQGPILLPCEVGMFY+VLAEM DGGDG+S
Sbjct: 64  ERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDDGGDGIS 123

Query: 121 NRSTAGENGGVIACSCSPLRLTSYGSRNSGGYRVLSPSSMLKLNHL 166
           NR T GE+GG+IA  CSPLRLTS GSRN GGYRVLSPSSMLKLN L
Sbjct: 124 NRWTGGESGGLIA--CSPLRLTSCGSRNGGGYRVLSPSSMLKLNGL 167

[Close]

BLAST of ClCG03G003940 vs. NCBI nr
Match: gi|659068797|ref|XP_008446293.1| (PREDICTED: uncharacterized protein LOC103489067 [Cucumis melo])

HSP 1 Score: 257.7 bits (657), Expect = 1.4e-65
Identity = 133/166 (80.12%), Postives = 142/166 (85.54%), Query Frame = 1


Query: 1   MKKKWSKYLGLKGLGRSRSVAGKTTVGPGGMTKKSKSWNTSSYFKTPVAPDGCFAVYVGP 60
           MKKKWSKY+GLKGLGRSRSV G T V   GM+KKSKSWN+ S +KTPVAPDGCFAVYVG 
Sbjct: 4   MKKKWSKYMGLKGLGRSRSVTGGTAV---GMSKKSKSWNSGSKYKTPVAPDGCFAVYVGA 63

Query: 61  ERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPCEVGMFYHVLAEMD-GGDGLS 120
           ERQRFVV+ +FANHPLFQ LLEDAEVEYGYNSQGPILLPCEVGMFY+VLAEMD GGDGLS
Sbjct: 64  ERQRFVVRTEFANHPLFQMLLEDAEVEYGYNSQGPILLPCEVGMFYNVLAEMDGGGDGLS 123

Query: 121 NRSTAGENGGVIACSCSPLRLTSYGSRNSGGYRVLSPSSMLKLNHL 166
           +R T GE+G      CSPLRLTS GSRN  GYRVLSPSSMLKLN L
Sbjct: 124 SRWTGGESG------CSPLRLTSCGSRNGVGYRVLSPSSMLKLNGL 160

[Close]

BLAST of ClCG03G003940 vs. NCBI nr
Match: gi|641845563|gb|KDO64450.1| (hypothetical protein CISIN_1g029186mg [Citrus sinensis])

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-31
Identity = 86/198 (43.43%), Postives = 113/198 (57.07%), Query Frame = 1


Query: 1   MKKKWSKYLGLKGLGRSRSVAGKTTVGPGG-------------MTKKSKSWNTSSYFKT- 60
           +K+KW K L LK   R +S+   ++ G G              M  KSKSW++S      
Sbjct: 4   VKQKWKKNLILKTWERCKSLGSSSSSGSGSGSSSNNKKPSCVMMMIKSKSWSSSPERNNN 63

Query: 61  ------PVAPDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPC 120
                  VAP+GCF+VYVGP+RQRFV+K +FANHPLF+ LLEDAE EYGY +QGPI+LPC
Sbjct: 64  YNNKGCQVAPEGCFSVYVGPQRQRFVIKTEFANHPLFKILLEDAESEYGYENQGPIMLPC 123

Query: 121 EVGMFYHVLAEMDG-GDGLSNRSTAGENGGVIACSCSPLRLTS--------------YGS 164
           +V +F+ VLAE++  GD   +   A +        CSPL L S              YG+
Sbjct: 124 DVDLFFKVLAELESTGDEDDDHDIANKG------CCSPLVLCSSPARRPNHRISSKDYGA 183

[Close]

BLAST of ClCG03G003940 vs. NCBI nr
Match: gi|694400281|ref|XP_009375239.1| (PREDICTED: uncharacterized protein LOC103964074 [Pyrus x bretschneideri])

HSP 1 Score: 144.1 bits (362), Expect = 2.2e-31
Identity = 80/168 (47.62%), Postives = 107/168 (63.69%), Query Frame = 1


Query: 1   MKKKWSKYLGLKGLGRSRSVAGKTTVGPGGMTKKSKSWNTSSYF---KTPVAPDGCFAVY 60
           +K+KW K + +    +  S+  +++     +  KSKS + SS     K  VAPDGCF+VY
Sbjct: 4   VKRKWKKNM-IANAWKRCSLQRESSSKVLNLMTKSKSCHCSSTTRKSKGQVAPDGCFSVY 63

Query: 61  VGPERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPCEVGMFYHVLAEMDGGDG 120
           VGP+RQRFVVK +FANHPLF+ LL+DAE+EYGYN  GPILLPC+V +FY+VLAEM+  + 
Sbjct: 64  VGPQRQRFVVKTEFANHPLFKMLLDDAEMEYGYNCDGPILLPCDVDLFYNVLAEMESSEE 123

Query: 121 LSNRSTAGENGGVIACSCSPLRL--TSYGSRNSGGYRVLSPSSMLKLN 164
           +S  +     G      CSP R   +S      G YR+LSP  MLK+N
Sbjct: 124 ISTPNCGFVKGYGSLMLCSPSRRLNSSINDGYGGAYRLLSPLKMLKIN 170

[Close]

BLAST of ClCG03G003940 vs. NCBI nr
Match: gi|590670451|ref|XP_007038060.1| (Calmodulin binding protein, putative [Theobroma cacao])

HSP 1 Score: 143.3 bits (360), Expect = 3.8e-31
Identity = 81/178 (45.51%), Postives = 113/178 (63.48%), Query Frame = 1


Query: 1   MKKKWSKYLGLKGLGR--SRSVAGKTTVGPG-GMTKKSKSWNTSSYFKTP---------- 60
           +K KW K +  +   R  S    GK + G      +KSKSW++++   +           
Sbjct: 4   VKMKWKKNVLFRAWERCWSLGTGGKKSSGTSCDALRKSKSWHSTTTRSSSLEEDEGKKRR 63

Query: 61  -VAPDGCFAVYVGPERQRFVVKAKFANHPLFQTLLEDAEVEYGYNSQGPILLPCEVGMFY 120
            VAP+GCF+VYVGP+RQRFVVK +FANHPLF+ LLEDAE+EYG++S+GP+LLPC+V +FY
Sbjct: 64  QVAPEGCFSVYVGPQRQRFVVKTEFANHPLFKMLLEDAELEYGFSSEGPLLLPCDVDLFY 123

Query: 121 HVLAEMDGGDGLSNRSTAGENGGVIACSCSPLRLTSYG-SRNSGGYRVLSPSSMLKLN 164
            VLAEMDGG  +S       +  ++   CSP R  S   ++  G Y++L+PS +LKLN
Sbjct: 124 KVLAEMDGGKEISPVRGFAYSPLIL---CSPSRRQSSSINKGYGSYKLLTPSRLLKLN 178

The following BLAST results are available for this feature:

BLAST of ClCG03G003940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU32_ARATH	1.4e-12	40.82	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1	[more]
SAU71_ARATH	9.8e-11	38.89	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1	[more]
SAU72_ARATH	7.0e-09	37.80	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana GN=SAUR72 PE=2 SV=1	[more]
ARG7_VIGRR	2.0e-08	40.26	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]
SAU41_ARATH	2.7e-08	37.50	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana GN=SAUR41 PE=2 SV=1	[more]

BLAST of ClCG03G003940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWR6_CUCSA	3.8e-70	82.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051690 PE=4 SV=1	[more]
A0A067FE70_CITSI	9.2e-32	43.43	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029186mg PE=4 SV=1	[more]
A0A061FZ72_THECC	2.7e-31	45.51	Calmodulin binding protein, putative OS=Theobroma cacao GN=TCM_014696 PE=4 SV=1	[more]
K4C8Y5_SOLLC	1.0e-30	54.35	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
V4VCR9_9ROSI	1.0e-30	42.50	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033363mg PE=4 SV=1	[more]

BLAST of ClCG03G003940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50760.1	2.9e-21	44.00	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	7.7e-14	40.82	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	1.1e-12	49.21	SAUR-like auxin-responsive protein family	[more]
AT1G56150.1	5.5e-12	38.89	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	7.2e-12	40.74	SAUR-like auxin-responsive protein family	[more]

BLAST of ClCG03G003940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778658187\|ref\|XP_004153127.2\|	5.5e-70	82.53	PREDICTED: uncharacterized protein LOC101220090 [Cucumis sativus]	[more]
gi\|659068797\|ref\|XP_008446293.1\|	1.4e-65	80.12	PREDICTED: uncharacterized protein LOC103489067 [Cucumis melo]	[more]
gi\|641845563\|gb\|KDO64450.1\|	1.3e-31	43.43	hypothetical protein CISIN_1g029186mg [Citrus sinensis]	[more]
gi\|694400281\|ref\|XP_009375239.1\|	2.2e-31	47.62	PREDICTED: uncharacterized protein LOC103964074 [Pyrus x bretschneideri]	[more]
gi\|590670451\|ref\|XP_007038060.1\|	3.8e-31	45.51	Calmodulin binding protein, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G003940.1	ClCG03G003940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 35..110 score: 3.8
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 1..116 score: 1.4
None	No IPR available	PANTHER	PTHR31374:SF10	SUBFAMILY NOT NAMED	coord: 1..116 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG03G003940	Csa1G051690	Cucumber (Chinese Long) v2	cuwcgB035
ClCG03G003940	MELO3C002378	Melon (DHL92) v3.5.1	mewcgB152
ClCG03G003940	Cla002638	Watermelon (97103) v1	wcgwmB223
ClCG03G003940	Cla97C03G055090	Watermelon (97103) v2	wcgwmbB186
ClCG03G003940	Bhi08G001249	Wax gourd	wcgwgoB342
ClCG03G003940	CSPI01G09770	Wild cucumber (PI 183967)	cpiwcgB038
ClCG03G003940	Cucsa.134820	Cucumber (Gy14) v1	cgywcgB222
ClCG03G003940	CmaCh13G008220	Cucurbita maxima (Rimu)	cmawcgB196
ClCG03G003940	CmoCh13G008530	Cucurbita moschata (Rifu)	cmowcgB186
ClCG03G003940	Lsi02G005210	Bottle gourd (USVL1VR-Ls)	lsiwcgB184
ClCG03G003940	Cp4.1LG09g09450	Cucurbita pepo (Zucchini)	cpewcgB036
ClCG03G003940	Cp4.1LG20g02870	Cucurbita pepo (Zucchini)	cpewcgB469
ClCG03G003940	CsGy1G009790	Cucumber (Gy14) v2	cgybwcgB033
ClCG03G003940	MELO3C002378.2	Melon (DHL92) v3.6.1	medwcgB144
ClCG03G003940	Carg07615	Silver-seed gourd	carwcgB0980
ClCG03G003940	Carg06809	Silver-seed gourd	carwcgB0480
ClCG03G003940	CsaV3_1G009830	Cucumber (Chinese Long) v3	cucwcgB038

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG03G003940	Watermelon (97103) v2	wcgwmbB191
ClCG03G003940	Watermelon (Charleston Gray)	wcgwcgB144
ClCG03G003940	Cucumber (Gy14) v1	cgywcgB262
ClCG03G003940	Cucurbita maxima (Rimu)	cmawcgB061
ClCG03G003940	Cucurbita maxima (Rimu)	cmawcgB116
ClCG03G003940	Cucurbita maxima (Rimu)	cmawcgB358
ClCG03G003940	Cucurbita moschata (Rifu)	cmowcgB053
ClCG03G003940	Cucurbita moschata (Rifu)	cmowcgB105
ClCG03G003940	Cucurbita moschata (Rifu)	cmowcgB350
ClCG03G003940	Wild cucumber (PI 183967)	cpiwcgB053
ClCG03G003940	Cucumber (Chinese Long) v2	cuwcgB052
ClCG03G003940	Melon (DHL92) v3.5.1	mewcgB244
ClCG03G003940	Watermelon (97103) v1	wcgwmB249
ClCG03G003940	Cucurbita pepo (Zucchini)	cpewcgB325
ClCG03G003940	Cucurbita pepo (Zucchini)	cpewcgB602
ClCG03G003940	Bottle gourd (USVL1VR-Ls)	lsiwcgB363
ClCG03G003940	Cucumber (Gy14) v2	cgybwcgB048
ClCG03G003940	Melon (DHL92) v3.6.1	medwcgB236
ClCG03G003940	Silver-seed gourd	carwcgB0356
ClCG03G003940	Cucumber (Chinese Long) v3	cucwcgB056