CsaV3_1G002510 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAACTTTGGGTACATCTAAATCCTAAGTTCTCAACTTTTATGCAATTAATTTAGTTTATAAACTTTTCAATAAATTTAGTCTCTAATATTAGTTTGTTATATATATTTCTTTTAAAAAATTATTATTTATCGAGAGTTCTGTAGATAGTTATAAATATATCAATTAAATTTAAAATAATTAAATATAGTAACGTTTAAAAAAATTACCGTCAAAATTTATCAAAGATGTTTATAATAGTCTATAGTGATAGATTTTATTATTATATACTTGATTATTATTTTTAAAATTACTGTCAATTATATTTTTATAGCCTTGGAATTTGAAAGGCCAATTGCAACAAATTCTTTCCCACTTTCTTTCTAAAATAATAATTAAAAAAAAACACACTCGACTAAATCTAGTCTTAGAAACTATCCAAACATGGACCCCCTCCCCTTCCCCAAATTATAAATAAAACCCCATGAACTGAAAAGAAAGATCAACCAAAAAACAAAACATCCTTCTTCCTAAAACTATTAGCCAAAGAAATAAAAAAAAAAAGTTATGATGATCATGATTTCTACTTCCTTTCTCTTCTCCTTCACTATTGTCTTTATACTCATTTTTTCCTCATTCTCCCAAACCTATTCAAATCCCCACAATATCATTCAAGAAACATGCAAGAAATCAGCTGCGAGTACCCCAAATCTCACCTACAAATTCTGTGTTACTTCTTTAGAATCCGACACCCGTAGTCGCTATGCGAATCTTCACAAACTTGGCCTCATTTCCATGGACTTGTTGCGACACAACGTAACAAGCACTCGACGAGAAATCAAAAAGCTTTTGAGGAACAAAAAAATGGAAGAGTTCATCAAGGGTTGTTTGAAGGATTGTGTAGAGCTTTATTCTGATGCTGTTCCGACATTGAAAGAAGCAAAAAGAGAATACAAAAATAGGAATTATAAAGATGCAAATATTAAGGTAAGTTCAATTATGGAAGCTCCTACAACTTGTGAAAATGGGTTTAAAGAAAAAGAAGGAATCATTTCGCCATTGACAAAGAATAACAGTGATGTGTTTCAATTGGCAGCTTTGACTCTCTCCATCATCAATATGAATCTGCATGATATCCAATAA ATGCAAACTTTGGAAACATGCAAGAAATCAGCTGCGAGTACCCCAAATCTCACCTACAAATTCTGTGTTACTTCTTTAGAATCCGACACCCGTAGTCGCTATGCGAATCTTCACAAACTTGGCCTCATTTCCATGGACTTGTTGCGACACAACGTAACAAGCACTCGACGAGAAATCAAAAAGCTTTTGAGGAACAAAAAAATGGAAGAGTTCATCAAGGGTTGTTTGAAGGATTGTGTAGAGCTTTATTCTGATGCTGTTCCGACATTGAAAGAAGCAAAAAGAGAATACAAAAATAGGAATTATAAAGATGCAAATATTAAGGTAAGTTCAATTATGGAAGCTCCTACAACTTGTGAAAATGGGTTTAAAGAAAAAGAAGGAATCATTTCGCCATTGACAAAGAATAACAGTGATGTGTTTCAATTGGCAGCTTTGACTCTCTCCATCATCAATATGAATCTGCATGATATCCAATAA ATGCAAACTTTGGAAACATGCAAGAAATCAGCTGCGAGTACCCCAAATCTCACCTACAAATTCTGTGTTACTTCTTTAGAATCCGACACCCGTAGTCGCTATGCGAATCTTCACAAACTTGGCCTCATTTCCATGGACTTGTTGCGACACAACGTAACAAGCACTCGACGAGAAATCAAAAAGCTTTTGAGGAACAAAAAAATGGAAGAGTTCATCAAGGGTTGTTTGAAGGATTGTGTAGAGCTTTATTCTGATGCTGTTCCGACATTGAAAGAAGCAAAAAGAGAATACAAAAATAGGAATTATAAAGATGCAAATATTAAGGTAAGTTCAATTATGGAAGCTCCTACAACTTGTGAAAATGGGTTTAAAGAAAAAGAAGGAATCATTTCGCCATTGACAAAGAATAACAGTGATGTGTTTCAATTGGCAGCTTTGACTCTCTCCATCATCAATATGAATCTGCATGATATCCAATAA MQTLETCKKSAASTPNLTYKFCVTSLESDTRSRYANLHKLGLISMDLLRHNVTSTRREIKKLLRNKKMEEFIKGCLKDCVELYSDAVPTLKEAKREYKNRNYKDANIKVSSIMEAPTTCENGFKEKEGIISPLTKNNSDVFQLAALTLSIINMNLHDIQ
BLAST of CsaV3_1G002510 vs. NCBI nr
Match: KGN63686.1 (hypothetical protein Csa_1G009900 [Cucumis sativus]) HSP 1 Score: 306.6 bits (784), Expect = 4.9e-80 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. NCBI nr
Match: XP_011660336.1 (PREDICTED: putative invertase inhibitor [Cucumis sativus]) HSP 1 Score: 306.6 bits (784), Expect = 4.9e-80 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. NCBI nr
Match: XP_022933437.1 (putative invertase inhibitor [Cucurbita moschata]) HSP 1 Score: 241.9 bits (616), Expect = 1.5e-60 Identity = 114/152 (75.00%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. NCBI nr
Match: XP_023531537.1 (putative invertase inhibitor [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241.9 bits (616), Expect = 1.5e-60 Identity = 115/152 (75.66%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. NCBI nr
Match: XP_022973011.1 (putative invertase inhibitor [Cucurbita maxima]) HSP 1 Score: 236.5 bits (602), Expect = 6.3e-59 Identity = 114/152 (75.00%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. TAIR10
Match: AT5G46970.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 102.8 bits (255), Expect = 2.0e-22 Identity = 58/137 (42.34%), Postives = 87/137 (63.50%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. TAIR10
Match: AT5G46940.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 101.3 bits (251), Expect = 5.7e-22 Identity = 56/155 (36.13%), Postives = 95/155 (61.29%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. TAIR10
Match: AT5G46930.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 90.1 bits (222), Expect = 1.3e-18 Identity = 52/151 (34.44%), Postives = 88/151 (58.28%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. TAIR10
Match: AT5G38610.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 88.2 bits (217), Expect = 5.0e-18 Identity = 57/162 (35.19%), Postives = 80/162 (49.38%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. TAIR10
Match: AT1G54620.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 74.7 bits (182), Expect = 5.7e-14 Identity = 47/152 (30.92%), Postives = 77/152 (50.66%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. Swiss-Prot
Match: sp|Q8GT41|PLA1_PLAAC (Putative invertase inhibitor OS=Platanus acerifolia OX=140101 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.5e-27 Identity = 63/148 (42.57%), Postives = 102/148 (68.92%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. Swiss-Prot
Match: sp|P83326|PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2) HSP 1 Score: 61.6 bits (148), Expect = 9.1e-09 Identity = 45/149 (30.20%), Postives = 76/149 (51.01%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. Swiss-Prot
Match: sp|O49603|CVIF2_ARATH (Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis thaliana OX=3702 GN=C/VIF2 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07 Identity = 40/128 (31.25%), Postives = 64/128 (50.00%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. Swiss-Prot
Match: sp|Q9LUV1|PMEI2_ARATH (Pectinesterase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=PMEI2 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07 Identity = 37/133 (27.82%), Postives = 68/133 (51.13%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. TrEMBL
Match: tr|A0A0A0LUJ3|A0A0A0LUJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009900 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 3.3e-80 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. TrEMBL
Match: tr|A0A2K1XQD5|A0A2K1XQD5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G044100v3 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.8e-46 Identity = 88/149 (59.06%), Postives = 126/149 (84.56%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. TrEMBL
Match: tr|V4U3U3|V4U3U3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10023652mg PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.9e-44 Identity = 89/149 (59.73%), Postives = 119/149 (79.87%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. TrEMBL
Match: tr|A0A2H5PZR7|A0A2H5PZR7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_182920 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.9e-44 Identity = 89/149 (59.73%), Postives = 119/149 (79.87%), Query Frame = 0
BLAST of CsaV3_1G002510 vs. TrEMBL
Match: tr|A0A067HCB9|A0A067HCB9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g036528mg PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.9e-44 Identity = 89/149 (59.73%), Postives = 119/149 (79.87%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |