Csa7G398130 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G398130
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 15388543 .. 15388839 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTTTCGACGACTATGATCGTGGGGGCGACTATGATGGATCATTTGGATCAGGTGGTGTTGGAGTTCTTACAGGCAAGAAAGATTGACACCACATCAGTTATAGAAACGACCAACCCTCCAGAATTGGCATCAAGTATTGCCCCCGTCAAGTTTGAAGTTCCAATTAATGCGGGTGACGAAGGTTTGGTGTTTGGTTTTGGAAAAATCAAGAACATTGGGAGTGAAGTTATTTATAAGGATCACGTAGTTAATTTGAAGAATGTTGGAAGAATCGATGTTTCTCTGGAATAA

mRNA sequence

ATGGCTTTTTCGACGACTATGATCGTGGGGGCGACTATGATGGATCATTTGGATCAGGTGGTGTTGGAGTTCTTACAGGCAAGAAAGATTGACACCACATCAGTTATAGAAACGACCAACCCTCCAGAATTGGCATCAAGTATTGCCCCCGTCAAGTTTGAAGTTCCAATTAATGCGGGTGACGAAGGTTTGGTGTTTGGTTTTGGAAAAATCAAGAACATTGGGAGTGAAGTTATTTATAAGGATCACGTAGTTAATTTGAAGAATGTTGGAAGAATCGATGTTTCTCTGGAATAA

Coding sequence (CDS)

ATGGCTTTTTCGACGACTATGATCGTGGGGGCGACTATGATGGATCATTTGGATCAGGTGGTGTTGGAGTTCTTACAGGCAAGAAAGATTGACACCACATCAGTTATAGAAACGACCAACCCTCCAGAATTGGCATCAAGTATTGCCCCCGTCAAGTTTGAAGTTCCAATTAATGCGGGTGACGAAGGTTTGGTGTTTGGTTTTGGAAAAATCAAGAACATTGGGAGTGAAGTTATTTATAAGGATCACGTAGTTAATTTGAAGAATGTTGGAAGAATCGATGTTTCTCTGGAATAA

Protein sequence

MAFSTTMIVGATMMDHLDQVVLEFLQARKIDTTSVIETTNPPELASSIAPVKFEVPINAGDEGLVFGFGKIKNIGSEVIYKDHVVNLKNVGRIDVSLE*
Homology
[Close]
BLAST of Csa7G398130 vs. TrEMBL
Match: A0A0A0KAY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398130 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-46
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1 

Query: 1  MAFSTTMIVGATMMDHLDQVVLEFLQARKIDTTSVIETTNPPELASSIAPVKFEVPINAG 60
          MAFSTTMIVGATMMDHLDQVVLEFLQARKIDTTSVIETTNPPELASSIAPVKFEVPINAG
Sbjct: 1  MAFSTTMIVGATMMDHLDQVVLEFLQARKIDTTSVIETTNPPELASSIAPVKFEVPINAG 60

Query: 61 DEGLVFGFGKIKNIGSEVIYKDHVVNLKNVGRIDVSLE 99
          DEGLVFGFGKIKNIGSEVIYKDHVVNLKNVGRIDVSLE
Sbjct: 61 DEGLVFGFGKIKNIGSEVIYKDHVVNLKNVGRIDVSLE 98

[Close]
BLAST of Csa7G398130 vs. NCBI nr
Match: gi|700189718|gb|KGN44951.1| (hypothetical protein Csa_7G398130 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 2.5e-46
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1 

Query: 1  MAFSTTMIVGATMMDHLDQVVLEFLQARKIDTTSVIETTNPPELASSIAPVKFEVPINAG 60
          MAFSTTMIVGATMMDHLDQVVLEFLQARKIDTTSVIETTNPPELASSIAPVKFEVPINAG
Sbjct: 1  MAFSTTMIVGATMMDHLDQVVLEFLQARKIDTTSVIETTNPPELASSIAPVKFEVPINAG 60

Query: 61 DEGLVFGFGKIKNIGSEVIYKDHVVNLKNVGRIDVSLE 99
          DEGLVFGFGKIKNIGSEVIYKDHVVNLKNVGRIDVSLE
Sbjct: 61 DEGLVFGFGKIKNIGSEVIYKDHVVNLKNVGRIDVSLE 98

The following BLAST results are available for this feature:
BLAST of Csa7G398130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAY1_CUCSA1.8e-46100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398130 PE=4 SV=1[more]
BLAST of Csa7G398130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189718|gb|KGN44951.1|2.5e-46100.00hypothetical protein Csa_7G398130 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU090091cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G398130.1Csa7G398130.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU090091CU090091transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G398130MELO3C015990Melon (DHL92) v3.5.1cumeB532
Csa7G398130MELO3C015990.2Melon (DHL92) v3.6.1cumedB511
Csa7G398130CSPI07G17580Wild cucumber (PI 183967)cpicuB354
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G398130Cucumber (Chinese Long) v2cucuB149
Csa7G398130Cucumber (Gy14) v1cgycuB312
Csa7G398130Cucurbita maxima (Rimu)cmacuB388
Csa7G398130Cucurbita maxima (Rimu)cmacuB914
Csa7G398130Cucurbita moschata (Rifu)cmocuB378
Csa7G398130Cucurbita moschata (Rifu)cmocuB900
Csa7G398130Watermelon (Charleston Gray)cuwcgB521
Csa7G398130Watermelon (Charleston Gray)cuwcgB526
Csa7G398130Watermelon (Charleston Gray)cuwcgB531
Csa7G398130Watermelon (97103) v1cuwmB560
Csa7G398130Watermelon (97103) v1cuwmB568
Csa7G398130Watermelon (97103) v1cuwmB588
Csa7G398130Watermelon (97103) v1cuwmB574
Csa7G398130Cucurbita pepo (Zucchini)cpecuB161
Csa7G398130Cucurbita pepo (Zucchini)cpecuB343
Csa7G398130Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G398130Bottle gourd (USVL1VR-Ls)culsiB516
Csa7G398130Cucumber (Gy14) v2cgybcuB323
Csa7G398130Silver-seed gourdcarcuB0119
Csa7G398130Silver-seed gourdcarcuB0594
Csa7G398130Silver-seed gourdcarcuB0833
Csa7G398130Watermelon (97103) v2cuwmbB517
Csa7G398130Watermelon (97103) v2cuwmbB539
Csa7G398130Watermelon (97103) v2cuwmbB565
Csa7G398130Watermelon (97103) v2cuwmbB572
Csa7G398130Wax gourdcuwgoB650
Csa7G398130Wax gourdcuwgoB657
Csa7G398130Wax gourdcuwgoB691